Query 021261
Match_columns 315
No_of_seqs 128 out of 1408
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 15:06:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 1.6E-37 5.3E-42 282.8 27.9 268 6-296 119-388 (407)
2 4hb9_A Similarities with proba 100.0 5.6E-35 1.9E-39 265.7 24.9 271 6-294 104-401 (412)
3 2xdo_A TETX2 protein; tetracyc 100.0 8.4E-33 2.9E-37 250.9 23.6 259 7-286 121-394 (398)
4 2qa2_A CABE, polyketide oxygen 100.0 4.1E-32 1.4E-36 252.6 28.8 258 8-294 101-365 (499)
5 2qa1_A PGAE, polyketide oxygen 100.0 5.2E-32 1.8E-36 252.0 28.3 259 7-294 99-364 (500)
6 2vou_A 2,6-dihydroxypyridine h 100.0 4.7E-32 1.6E-36 245.9 23.9 257 10-293 95-381 (397)
7 2x3n_A Probable FAD-dependent 100.0 8.7E-33 3E-37 250.8 17.8 263 8-297 101-377 (399)
8 3fmw_A Oxygenase; mithramycin, 100.0 1.3E-31 4.5E-36 252.5 17.7 261 7-295 141-411 (570)
9 1k0i_A P-hydroxybenzoate hydro 100.0 3.2E-30 1.1E-34 233.5 21.6 267 6-298 95-373 (394)
10 1pn0_A Phenol 2-monooxygenase; 100.0 1.6E-30 5.4E-35 249.3 20.2 252 6-282 111-427 (665)
11 3ihg_A RDME; flavoenzyme, anth 100.0 1.9E-29 6.7E-34 237.1 23.6 249 7-281 113-376 (535)
12 2r0c_A REBC; flavin adenine di 100.0 7.2E-30 2.5E-34 240.4 20.6 260 6-297 130-409 (549)
13 3c96_A Flavin-containing monoo 100.0 9.8E-30 3.3E-34 231.6 20.1 239 7-272 100-366 (410)
14 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.5E-30 5E-35 234.6 11.3 237 6-272 99-344 (379)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 5.8E-29 2E-33 238.0 17.7 251 6-282 133-418 (639)
16 3e1t_A Halogenase; flavoprotei 100.0 7.2E-27 2.5E-31 218.3 24.3 257 6-279 103-370 (512)
17 3atr_A Conserved archaeal prot 100.0 2.2E-27 7.5E-32 218.7 19.7 245 8-279 94-356 (453)
18 3oz2_A Digeranylgeranylglycero 100.0 2.6E-26 8.8E-31 207.3 25.2 247 6-278 94-350 (397)
19 3cgv_A Geranylgeranyl reductas 99.9 1.2E-25 4.1E-30 203.4 26.2 246 7-280 95-352 (397)
20 3c4a_A Probable tryptophan hyd 99.9 7E-28 2.4E-32 217.2 8.7 249 6-294 90-352 (381)
21 3i3l_A Alkylhalidase CMLS; fla 99.9 4.1E-25 1.4E-29 208.7 24.6 262 7-289 121-395 (591)
22 2gmh_A Electron transfer flavo 99.9 5.1E-24 1.8E-28 201.6 23.1 253 7-281 137-428 (584)
23 3nix_A Flavoprotein/dehydrogen 99.9 3.3E-23 1.1E-27 188.9 21.6 241 6-269 98-350 (421)
24 2pyx_A Tryptophan halogenase; 99.9 9.7E-23 3.3E-27 191.0 21.2 248 7-289 168-427 (526)
25 2weu_A Tryptophan 5-halogenase 99.9 1.6E-22 5.6E-27 188.9 21.7 245 6-289 165-419 (511)
26 2aqj_A Tryptophan halogenase, 99.9 6E-22 2.1E-26 186.2 18.4 243 7-289 158-411 (538)
27 2e4g_A Tryptophan halogenase; 99.9 6.8E-22 2.3E-26 186.1 16.6 244 7-289 187-442 (550)
28 3ihm_A Styrene monooxygenase A 99.8 4.4E-19 1.5E-23 162.1 18.6 237 8-275 116-375 (430)
29 2bry_A NEDD9 interacting prote 99.6 2.4E-15 8.1E-20 139.7 7.3 69 9-77 161-239 (497)
30 1yvv_A Amine oxidase, flavin-c 99.3 3.7E-11 1.3E-15 105.6 17.2 194 26-233 119-329 (336)
31 1ryi_A Glycine oxidase; flavop 98.6 2.5E-07 8.7E-12 82.4 11.4 195 9-229 159-361 (382)
32 2gag_B Heterotetrameric sarcos 98.6 1.5E-06 5.2E-11 77.9 15.9 112 11-128 171-286 (405)
33 1y56_B Sarcosine oxidase; dehy 98.4 5.1E-06 1.7E-10 74.0 14.6 67 10-77 145-215 (382)
34 3nyc_A D-arginine dehydrogenas 98.4 4.3E-06 1.5E-10 74.2 13.4 68 9-77 149-219 (381)
35 2gf3_A MSOX, monomeric sarcosi 98.2 1.9E-05 6.5E-10 70.3 14.2 66 9-75 145-213 (389)
36 2oln_A NIKD protein; flavoprot 98.2 0.0001 3.5E-09 65.9 18.0 68 10-78 149-219 (397)
37 3ps9_A TRNA 5-methylaminomethy 98.1 4E-05 1.4E-09 73.6 14.2 67 9-75 412-481 (676)
38 2qcu_A Aerobic glycerol-3-phos 98.0 0.00013 4.3E-09 67.6 15.8 65 11-75 146-219 (501)
39 4dgk_A Phytoene dehydrogenase; 98.0 0.00014 4.7E-09 67.2 16.0 61 15-75 222-285 (501)
40 3pvc_A TRNA 5-methylaminomethy 98.0 3.4E-05 1.2E-09 74.3 11.9 67 10-76 408-478 (689)
41 3dme_A Conserved exported prot 98.0 0.00023 7.8E-09 62.6 15.9 68 10-77 146-220 (369)
42 3i6d_A Protoporphyrinogen oxid 98.0 0.00071 2.4E-08 61.6 19.5 56 15-70 236-291 (470)
43 3dje_A Fructosyl amine: oxygen 97.9 0.00015 5E-09 65.8 12.7 61 9-69 156-222 (438)
44 3axb_A Putative oxidoreductase 97.8 0.0026 8.9E-08 57.7 19.1 69 10-79 177-266 (448)
45 3qj4_A Renalase; FAD/NAD(P)-bi 97.6 0.00045 1.6E-08 60.3 11.3 52 15-67 113-164 (342)
46 2uzz_A N-methyl-L-tryptophan o 97.6 0.00049 1.7E-08 60.7 11.6 59 10-69 145-205 (372)
47 2ywl_A Thioredoxin reductase r 97.6 0.00012 4.2E-09 57.7 6.8 65 11-77 53-119 (180)
48 3da1_A Glycerol-3-phosphate de 97.5 0.00077 2.6E-08 63.2 12.3 68 10-77 166-242 (561)
49 3v76_A Flavoprotein; structura 97.4 0.00027 9.1E-09 63.8 7.3 67 10-77 128-207 (417)
50 2i0z_A NAD(FAD)-utilizing dehy 97.4 0.00035 1.2E-08 63.6 8.1 65 13-77 133-211 (447)
51 3c4n_A Uncharacterized protein 97.4 0.00052 1.8E-08 61.6 8.9 70 9-79 167-249 (405)
52 2cul_A Glucose-inhibited divis 97.3 0.00027 9.2E-09 58.3 5.8 65 12-77 66-134 (232)
53 3ka7_A Oxidoreductase; structu 97.3 0.0054 1.8E-07 55.0 14.7 59 14-74 196-257 (425)
54 3nrn_A Uncharacterized protein 97.3 0.0079 2.7E-07 54.0 15.3 59 14-75 189-249 (421)
55 3lov_A Protoporphyrinogen oxid 97.2 0.052 1.8E-06 49.4 20.3 55 15-70 237-291 (475)
56 3nlc_A Uncharacterized protein 97.1 0.0016 5.5E-08 60.7 8.8 66 12-77 218-290 (549)
57 2jae_A L-amino acid oxidase; o 96.8 0.002 7E-08 59.1 7.2 53 15-67 240-295 (489)
58 3kkj_A Amine oxidase, flavin-c 96.8 0.00078 2.7E-08 55.9 3.8 37 191-233 293-329 (336)
59 3k7m_X 6-hydroxy-L-nicotine ox 96.8 0.2 7E-06 44.7 20.0 51 15-67 208-258 (431)
60 2vvm_A Monoamine oxidase N; FA 96.8 0.089 3.1E-06 48.1 17.6 55 15-69 256-313 (495)
61 1sez_A Protoporphyrinogen oxid 96.7 0.07 2.4E-06 48.9 16.6 57 14-70 243-310 (504)
62 2ivd_A PPO, PPOX, protoporphyr 96.7 0.094 3.2E-06 47.7 17.2 58 15-74 239-299 (478)
63 3ab1_A Ferredoxin--NADP reduct 96.6 0.0028 9.5E-08 55.6 6.0 65 11-75 71-138 (360)
64 1rp0_A ARA6, thiazole biosynth 96.6 0.0045 1.5E-07 52.6 7.0 63 12-74 117-197 (284)
65 2gqf_A Hypothetical protein HI 96.6 0.0035 1.2E-07 56.1 6.6 56 12-68 107-168 (401)
66 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0033 1.1E-07 57.1 6.5 60 11-70 112-179 (447)
67 4a9w_A Monooxygenase; baeyer-v 96.5 0.0058 2E-07 53.1 7.7 58 11-69 73-133 (357)
68 2zbw_A Thioredoxin reductase; 96.5 0.0045 1.6E-07 53.5 6.9 66 11-76 62-129 (335)
69 4gut_A Lysine-specific histone 96.5 0.052 1.8E-06 52.7 14.3 44 25-68 542-585 (776)
70 3ces_A MNMG, tRNA uridine 5-ca 96.2 0.006 2E-07 57.7 6.1 66 10-76 120-189 (651)
71 3gwf_A Cyclohexanone monooxyge 96.2 0.014 4.7E-07 54.4 8.3 60 10-69 83-148 (540)
72 2iid_A L-amino-acid oxidase; f 96.2 0.034 1.2E-06 51.0 10.9 52 15-67 242-297 (498)
73 2yg5_A Putrescine oxidase; oxi 96.2 0.076 2.6E-06 47.9 13.0 57 15-74 216-273 (453)
74 1qo8_A Flavocytochrome C3 fuma 96.1 0.011 3.7E-07 55.4 7.1 63 12-74 248-318 (566)
75 2q0l_A TRXR, thioredoxin reduc 96.0 0.011 3.7E-07 50.5 6.0 61 10-71 55-117 (311)
76 3jsk_A Cypbp37 protein; octame 95.8 0.014 4.7E-07 50.9 6.2 63 12-74 158-257 (344)
77 1w4x_A Phenylacetone monooxyge 95.8 0.016 5.4E-07 54.0 6.9 60 11-70 91-156 (542)
78 3cp8_A TRNA uridine 5-carboxym 95.8 0.02 6.7E-07 54.1 7.5 62 10-72 113-178 (641)
79 2zxi_A TRNA uridine 5-carboxym 95.7 0.015 5.2E-07 54.8 6.5 64 10-74 119-186 (637)
80 2z3y_A Lysine-specific histone 95.7 0.33 1.1E-05 46.3 15.7 42 26-67 410-457 (662)
81 2v3a_A Rubredoxin reductase; a 95.7 0.027 9.2E-07 49.9 7.7 56 15-70 188-245 (384)
82 2rgh_A Alpha-glycerophosphate 95.6 0.19 6.6E-06 46.9 13.6 66 11-76 185-259 (571)
83 1vdc_A NTR, NADPH dependent th 95.5 0.014 4.7E-07 50.4 4.8 59 10-70 66-126 (333)
84 4ap3_A Steroid monooxygenase; 95.4 0.035 1.2E-06 51.7 7.7 59 11-69 96-160 (549)
85 2yqu_A 2-oxoglutarate dehydrog 95.4 0.033 1.1E-06 50.6 7.3 56 15-70 209-266 (455)
86 1c0p_A D-amino acid oxidase; a 95.4 0.055 1.9E-06 47.3 8.5 48 9-69 137-186 (363)
87 1y0p_A Fumarate reductase flav 95.3 0.027 9.2E-07 52.8 6.7 60 13-72 254-321 (571)
88 1pj5_A N,N-dimethylglycine oxi 95.2 0.05 1.7E-06 53.4 8.5 69 9-78 146-218 (830)
89 1b37_A Protein (polyamine oxid 95.0 0.057 2E-06 49.1 7.6 55 15-69 207-271 (472)
90 2xve_A Flavin-containing monoo 94.8 0.03 1E-06 51.0 5.3 62 10-71 97-169 (464)
91 1rsg_A FMS1 protein; FAD bindi 94.8 0.052 1.8E-06 50.1 6.9 56 14-69 202-258 (516)
92 1ges_A Glutathione reductase; 94.7 0.058 2E-06 48.9 6.9 46 26-71 222-268 (450)
93 1fl2_A Alkyl hydroperoxide red 94.7 0.044 1.5E-06 46.6 5.7 60 11-70 53-117 (310)
94 3o0h_A Glutathione reductase; 94.7 0.065 2.2E-06 49.0 7.1 46 26-71 246-291 (484)
95 3lzw_A Ferredoxin--NADP reduct 94.6 0.055 1.9E-06 46.3 6.2 61 11-72 64-127 (332)
96 3uox_A Otemo; baeyer-villiger 94.6 0.04 1.4E-06 51.3 5.5 60 11-70 84-149 (545)
97 2r9z_A Glutathione amide reduc 94.5 0.083 2.8E-06 48.0 7.3 46 25-70 220-266 (463)
98 1s3e_A Amine oxidase [flavin-c 94.4 0.063 2.2E-06 49.5 6.5 54 15-69 216-269 (520)
99 2eq6_A Pyruvate dehydrogenase 94.2 0.1 3.6E-06 47.4 7.3 47 25-71 223-274 (464)
100 3fbs_A Oxidoreductase; structu 94.1 0.14 4.8E-06 42.9 7.6 61 10-71 52-115 (297)
101 1d4d_A Flavocytochrome C fumar 94.1 0.096 3.3E-06 49.0 7.0 62 13-74 254-323 (572)
102 2a87_A TRXR, TR, thioredoxin r 94.0 0.081 2.8E-06 45.6 5.9 58 11-70 68-128 (335)
103 3d1c_A Flavin-containing putat 93.9 0.12 4E-06 45.1 7.0 58 11-69 85-144 (369)
104 3g3e_A D-amino-acid oxidase; F 93.9 0.068 2.3E-06 46.5 5.3 49 9-69 137-187 (351)
105 2q7v_A Thioredoxin reductase; 93.9 0.11 3.7E-06 44.6 6.4 58 11-69 62-124 (325)
106 3iwa_A FAD-dependent pyridine 93.8 0.13 4.3E-06 46.9 7.0 53 25-77 215-269 (472)
107 1m6i_A Programmed cell death p 93.7 0.15 5.3E-06 46.7 7.5 55 15-69 227-283 (493)
108 1kf6_A Fumarate reductase flav 93.7 0.13 4.3E-06 48.6 7.0 61 14-74 134-203 (602)
109 1trb_A Thioredoxin reductase; 93.5 0.1 3.5E-06 44.5 5.7 58 11-70 59-118 (320)
110 1xdi_A RV3303C-LPDA; reductase 93.5 0.14 4.8E-06 47.0 6.9 46 25-70 236-281 (499)
111 3fg2_P Putative rubredoxin red 93.5 0.18 6.3E-06 44.8 7.5 53 25-77 197-252 (404)
112 3lxd_A FAD-dependent pyridine 93.4 0.21 7.1E-06 44.5 7.7 46 25-70 207-253 (415)
113 3cty_A Thioredoxin reductase; 93.2 0.12 4.1E-06 44.1 5.6 58 10-69 68-127 (319)
114 3ef6_A Toluene 1,2-dioxygenase 93.1 0.18 6E-06 45.0 6.7 53 25-77 198-252 (410)
115 3f8d_A Thioredoxin reductase ( 93.0 0.27 9.3E-06 41.6 7.7 58 11-69 67-126 (323)
116 3s5w_A L-ornithine 5-monooxyge 93.0 0.18 6E-06 45.7 6.7 60 11-70 124-194 (463)
117 2gjc_A Thiazole biosynthetic e 92.9 0.19 6.5E-06 43.3 6.4 63 12-74 144-245 (326)
118 2wpf_A Trypanothione reductase 92.8 0.24 8.1E-06 45.4 7.3 46 25-70 248-294 (495)
119 2hqm_A GR, grase, glutathione 92.7 0.21 7.3E-06 45.5 6.9 45 26-70 240-287 (479)
120 1hyu_A AHPF, alkyl hydroperoxi 92.7 0.17 5.7E-06 46.8 6.1 59 11-69 264-327 (521)
121 1mo9_A ORF3; nucleotide bindin 92.6 0.19 6.4E-06 46.5 6.3 46 25-70 268-318 (523)
122 3itj_A Thioredoxin reductase 1 92.5 0.23 7.8E-06 42.5 6.5 59 11-70 81-144 (338)
123 1fec_A Trypanothione reductase 92.4 0.24 8.3E-06 45.3 6.8 55 16-70 233-290 (490)
124 1ebd_A E3BD, dihydrolipoamide 92.3 0.24 8.1E-06 44.8 6.5 46 25-70 224-272 (455)
125 1onf_A GR, grase, glutathione 92.0 0.35 1.2E-05 44.3 7.4 46 25-70 230-277 (500)
126 2qae_A Lipoamide, dihydrolipoy 92.0 0.28 9.6E-06 44.5 6.7 46 25-70 229-278 (468)
127 1q1r_A Putidaredoxin reductase 91.6 0.38 1.3E-05 43.1 7.0 44 26-69 205-251 (431)
128 1ojt_A Surface protein; redox- 91.5 0.25 8.5E-06 45.1 5.8 45 26-70 240-288 (482)
129 3oc4_A Oxidoreductase, pyridin 91.5 0.45 1.5E-05 42.9 7.4 45 25-70 202-246 (452)
130 3p1w_A Rabgdi protein; GDI RAB 90.8 0.37 1.3E-05 43.8 6.1 54 14-67 256-313 (475)
131 4at0_A 3-ketosteroid-delta4-5a 90.7 0.48 1.6E-05 43.5 6.9 55 15-69 203-265 (510)
132 1dxl_A Dihydrolipoamide dehydr 90.7 0.4 1.4E-05 43.4 6.3 46 25-70 231-281 (470)
133 3ntd_A FAD-dependent pyridine 90.7 0.58 2E-05 43.5 7.5 46 25-70 205-269 (565)
134 2a8x_A Dihydrolipoyl dehydroge 90.3 0.6 2.1E-05 42.2 7.1 45 26-70 226-273 (464)
135 1v59_A Dihydrolipoamide dehydr 89.9 0.48 1.7E-05 43.0 6.1 47 25-71 237-290 (478)
136 1zmd_A Dihydrolipoyl dehydroge 89.8 0.6 2E-05 42.4 6.7 46 25-70 233-284 (474)
137 2e5v_A L-aspartate oxidase; ar 89.8 0.45 1.5E-05 43.3 5.8 60 13-73 118-181 (472)
138 3urh_A Dihydrolipoyl dehydroge 89.8 0.74 2.5E-05 42.0 7.3 46 25-70 252-302 (491)
139 3s5w_A L-ornithine 5-monooxyge 89.8 0.78 2.7E-05 41.3 7.4 43 25-67 329-376 (463)
140 3lad_A Dihydrolipoamide dehydr 89.7 0.63 2.1E-05 42.2 6.7 46 25-70 234-282 (476)
141 1d5t_A Guanine nucleotide diss 89.5 0.26 8.9E-06 44.3 3.9 55 15-69 235-291 (433)
142 2cdu_A NADPH oxidase; flavoenz 89.4 1 3.5E-05 40.5 7.8 46 25-70 204-249 (452)
143 4dna_A Probable glutathione re 89.3 0.63 2.2E-05 42.1 6.4 45 25-70 224-270 (463)
144 2gqw_A Ferredoxin reductase; f 89.0 0.85 2.9E-05 40.5 7.0 49 25-77 200-250 (408)
145 2h88_A Succinate dehydrogenase 89.0 1.2 4.1E-05 42.0 8.2 57 14-70 155-219 (621)
146 2a8x_A Dihydrolipoyl dehydroge 89.0 0.43 1.5E-05 43.2 5.0 45 25-72 104-150 (464)
147 2wdq_A Succinate dehydrogenase 88.3 1.3 4.4E-05 41.5 7.8 57 14-70 143-208 (588)
148 1zk7_A HGII, reductase, mercur 87.9 1.1 3.8E-05 40.5 7.0 54 16-70 218-273 (467)
149 3l8k_A Dihydrolipoyl dehydroge 87.8 0.87 3E-05 41.2 6.3 57 14-71 214-275 (466)
150 3ic9_A Dihydrolipoamide dehydr 87.8 1.1 3.8E-05 40.9 7.0 56 15-70 216-276 (492)
151 2xag_A Lysine-specific histone 87.6 0.63 2.2E-05 45.6 5.5 42 26-67 581-628 (852)
152 1chu_A Protein (L-aspartate ox 87.5 0.33 1.1E-05 45.0 3.3 57 15-71 139-211 (540)
153 3dgh_A TRXR-1, thioredoxin red 87.3 1.3 4.4E-05 40.2 7.1 46 25-70 240-291 (483)
154 2b9w_A Putative aminooxidase; 86.6 1.1 3.8E-05 39.7 6.2 53 15-69 207-259 (424)
155 3d1c_A Flavin-containing putat 86.6 1.3 4.5E-05 38.2 6.5 42 27-68 230-272 (369)
156 1trb_A Thioredoxin reductase; 86.6 1.2 4.2E-05 37.6 6.2 54 15-68 185-247 (320)
157 3h8l_A NADH oxidase; membrane 86.1 1.1 3.6E-05 39.8 5.7 49 16-68 220-270 (409)
158 4b1b_A TRXR, thioredoxin reduc 85.9 2.2 7.4E-05 39.5 7.8 46 25-70 276-321 (542)
159 3nks_A Protoporphyrinogen oxid 85.8 0.74 2.5E-05 41.6 4.7 54 15-69 235-291 (477)
160 1dxl_A Dihydrolipoamide dehydr 85.8 1.2 4E-05 40.3 6.0 48 26-76 110-159 (470)
161 2bcg_G Secretory pathway GDP d 85.7 0.86 3E-05 41.1 5.0 54 15-69 243-301 (453)
162 3ics_A Coenzyme A-disulfide re 84.0 1.7 5.8E-05 40.5 6.3 44 25-70 241-284 (588)
163 1q1r_A Putidaredoxin reductase 83.9 0.95 3.2E-05 40.5 4.4 44 25-70 73-116 (431)
164 1nhp_A NADH peroxidase; oxidor 83.9 1.7 5.8E-05 39.0 6.1 54 15-70 192-248 (447)
165 3itj_A Thioredoxin reductase 1 83.7 1.4 4.7E-05 37.4 5.2 52 15-67 213-270 (338)
166 4gde_A UDP-galactopyranose mut 83.3 1.2 4.2E-05 40.5 4.9 54 14-69 222-277 (513)
167 2zbw_A Thioredoxin reductase; 83.1 2.5 8.6E-05 35.9 6.6 54 15-68 192-252 (335)
168 1lvl_A Dihydrolipoamide dehydr 83.0 1.6 5.4E-05 39.4 5.5 43 26-70 226-270 (458)
169 3dk9_A Grase, GR, glutathione 82.5 2.3 7.8E-05 38.5 6.4 46 25-70 241-295 (478)
170 2bc0_A NADH oxidase; flavoprot 82.2 2.7 9.2E-05 38.2 6.8 44 25-70 249-293 (490)
171 2bs2_A Quinol-fumarate reducta 81.8 3.2 0.00011 39.5 7.2 56 15-70 159-222 (660)
172 4dsg_A UDP-galactopyranose mut 81.6 2.5 8.7E-05 38.4 6.3 56 14-71 216-273 (484)
173 1v59_A Dihydrolipoamide dehydr 81.5 2 7E-05 38.8 5.7 41 25-68 109-157 (478)
174 1ojt_A Surface protein; redox- 81.4 1.8 6.1E-05 39.3 5.3 43 25-70 108-162 (482)
175 4b63_A L-ornithine N5 monooxyg 80.9 2.6 8.9E-05 38.5 6.2 59 9-67 140-213 (501)
176 3vrd_B FCCB subunit, flavocyto 80.9 1.2 4E-05 39.3 3.7 54 14-67 198-257 (401)
177 1y56_A Hypothetical protein PH 80.9 1.8 6.3E-05 39.4 5.2 51 26-76 271-323 (493)
178 3f8d_A Thioredoxin reductase ( 80.8 3 0.0001 34.9 6.3 53 15-68 194-251 (323)
179 2q0l_A TRXR, thioredoxin reduc 80.2 3.8 0.00013 34.3 6.6 51 16-67 184-240 (311)
180 3klj_A NAD(FAD)-dependent dehy 79.7 2.1 7E-05 37.7 4.9 40 26-67 76-115 (385)
181 3ab1_A Ferredoxin--NADP reduct 79.6 2.7 9.2E-05 36.2 5.6 44 25-68 215-263 (360)
182 3cgb_A Pyridine nucleotide-dis 79.2 2.1 7.2E-05 38.8 4.9 45 25-69 106-153 (480)
183 3r9u_A Thioredoxin reductase; 79.1 4.1 0.00014 34.0 6.5 43 25-67 196-243 (315)
184 3fpz_A Thiazole biosynthetic e 78.4 0.61 2.1E-05 39.9 1.0 41 192-232 283-325 (326)
185 3dgz_A Thioredoxin reductase 2 77.1 4.7 0.00016 36.5 6.6 46 25-70 238-289 (488)
186 3cgb_A Pyridine nucleotide-dis 77.0 4.8 0.00016 36.4 6.7 45 25-70 240-284 (480)
187 2q7v_A Thioredoxin reductase; 76.7 5.5 0.00019 33.6 6.7 43 25-67 201-248 (325)
188 3cty_A Thioredoxin reductase; 76.6 6.6 0.00022 33.0 7.1 52 15-68 195-252 (319)
189 3lzw_A Ferredoxin--NADP reduct 76.1 3.3 0.00011 34.9 5.1 43 25-67 202-249 (332)
190 4g6h_A Rotenone-insensitive NA 75.6 3.7 0.00013 37.6 5.5 43 25-67 285-331 (502)
191 1vg0_A RAB proteins geranylger 75.2 5.3 0.00018 37.8 6.5 50 14-63 378-432 (650)
192 1xhc_A NADH oxidase /nitrite r 74.9 2.4 8.1E-05 37.0 3.9 41 25-70 196-236 (367)
193 2gqw_A Ferredoxin reductase; f 74.6 3.4 0.00012 36.5 4.9 43 26-70 73-115 (408)
194 4eqs_A Coenzyme A disulfide re 74.4 4.9 0.00017 35.9 5.9 49 14-68 192-240 (437)
195 3kd9_A Coenzyme A disulfide re 74.3 3.8 0.00013 36.7 5.2 42 27-69 204-245 (449)
196 1ebd_A E3BD, dihydrolipoamide 74.3 5.2 0.00018 35.8 6.1 45 25-72 104-149 (455)
197 1jnr_A Adenylylsulfate reducta 74.2 4.9 0.00017 38.0 6.1 56 15-70 152-220 (643)
198 3ayj_A Pro-enzyme of L-phenyla 73.9 2.1 7E-05 41.1 3.4 53 15-67 348-413 (721)
199 3fbs_A Oxidoreductase; structu 73.0 5.4 0.00019 32.9 5.6 47 15-67 179-225 (297)
200 3r9u_A Thioredoxin reductase; 71.5 10 0.00036 31.4 7.1 57 10-68 58-118 (315)
201 1fl2_A Alkyl hydroperoxide red 71.5 7.6 0.00026 32.3 6.2 52 15-67 184-241 (310)
202 3h28_A Sulfide-quinone reducta 70.6 4 0.00014 36.2 4.4 50 13-68 203-256 (430)
203 1zmd_A Dihydrolipoyl dehydroge 70.0 8.6 0.00029 34.6 6.5 45 25-72 110-156 (474)
204 3hyw_A Sulfide-quinone reducta 69.2 5 0.00017 35.7 4.7 40 26-68 70-109 (430)
205 4fk1_A Putative thioredoxin re 69.0 14 0.00047 30.8 7.2 58 11-68 57-117 (304)
206 1vdc_A NTR, NADPH dependent th 68.8 8.8 0.0003 32.3 6.0 43 25-67 208-258 (333)
207 3sx6_A Sulfide-quinone reducta 67.0 8.1 0.00028 34.4 5.6 48 26-76 73-120 (437)
208 3k30_A Histamine dehydrogenase 66.7 4.3 0.00015 38.7 3.9 52 13-68 570-624 (690)
209 3hyw_A Sulfide-quinone reducta 66.5 12 0.00041 33.2 6.6 51 13-67 203-255 (430)
210 2bc0_A NADH oxidase; flavoprot 66.1 3.5 0.00012 37.5 3.0 43 26-69 106-150 (490)
211 1ps9_A 2,4-dienoyl-COA reducta 65.9 11 0.00037 35.8 6.5 48 16-68 579-628 (671)
212 3gwf_A Cyclohexanone monooxyge 64.7 5.4 0.00018 36.8 4.0 41 25-69 343-385 (540)
213 3ef6_A Toluene 1,2-dioxygenase 63.8 8.5 0.00029 33.9 5.1 40 26-67 71-110 (410)
214 1m6i_A Programmed cell death p 63.2 6.7 0.00023 35.6 4.4 41 26-68 104-144 (493)
215 1nhp_A NADH peroxidase; oxidor 59.8 13 0.00044 33.1 5.6 44 26-69 70-116 (447)
216 2cdu_A NADPH oxidase; flavoenz 59.5 8.2 0.00028 34.5 4.2 44 26-69 72-118 (452)
217 3gyx_A Adenylylsulfate reducta 55.0 17 0.00058 34.5 5.7 58 13-70 165-235 (662)
218 3qfa_A Thioredoxin reductase 1 54.8 30 0.001 31.5 7.2 46 25-70 263-317 (519)
219 1xhc_A NADH oxidase /nitrite r 54.8 10 0.00036 32.8 3.9 40 26-68 74-113 (367)
220 2a87_A TRXR, TR, thioredoxin r 54.5 9.9 0.00034 32.2 3.7 43 25-67 204-251 (335)
221 3h28_A Sulfide-quinone reducta 54.5 14 0.00046 32.8 4.7 41 26-69 70-110 (430)
222 3uox_A Otemo; baeyer-villiger 54.4 11 0.00039 34.7 4.3 38 26-68 352-391 (545)
223 3sx6_A Sulfide-quinone reducta 53.4 18 0.0006 32.1 5.3 51 13-67 211-268 (437)
224 3lxd_A FAD-dependent pyridine 52.3 15 0.0005 32.3 4.6 41 25-67 78-118 (415)
225 2qae_A Lipoamide, dihydrolipoy 51.7 29 0.001 30.9 6.6 42 26-70 107-150 (468)
226 3h8l_A NADH oxidase; membrane 50.3 22 0.00074 31.1 5.4 38 192-232 299-336 (409)
227 4a5l_A Thioredoxin reductase; 48.3 31 0.0011 28.5 5.9 57 11-68 63-121 (314)
228 2x8g_A Thioredoxin glutathione 47.4 56 0.0019 30.2 7.9 46 25-70 339-397 (598)
229 2yqu_A 2-oxoglutarate dehydrog 46.1 25 0.00087 31.2 5.2 41 26-70 103-143 (455)
230 3oc4_A Oxidoreductase, pyridin 45.6 16 0.00055 32.5 3.8 43 26-68 72-115 (452)
231 2l8d_A Lamin-B receptor; DNA b 43.8 42 0.0014 20.9 4.2 30 25-54 21-50 (66)
232 3iwa_A FAD-dependent pyridine 43.8 30 0.001 30.9 5.3 43 26-68 80-125 (472)
233 4g6h_A Rotenone-insensitive NA 42.8 35 0.0012 31.0 5.6 38 192-232 364-401 (502)
234 3ntd_A FAD-dependent pyridine 42.8 23 0.00078 32.5 4.4 43 26-68 72-117 (565)
235 3vrd_B FCCB subunit, flavocyto 42.6 33 0.0011 29.7 5.3 41 26-69 69-109 (401)
236 1hyu_A AHPF, alkyl hydroperoxi 42.5 46 0.0016 30.3 6.4 43 25-67 404-452 (521)
237 3ics_A Coenzyme A-disulfide re 42.5 32 0.0011 31.8 5.4 43 26-68 107-152 (588)
238 3pl8_A Pyranose 2-oxidase; sub 41.5 37 0.0013 31.8 5.7 50 25-74 273-330 (623)
239 1o94_A Tmadh, trimethylamine d 40.5 24 0.00081 33.8 4.3 50 15-68 576-646 (729)
240 1xdi_A RV3303C-LPDA; reductase 39.8 42 0.0014 30.3 5.6 44 25-69 108-157 (499)
241 2ywl_A Thioredoxin reductase r 39.0 36 0.0012 25.5 4.4 39 191-233 134-172 (180)
242 4ap3_A Steroid monooxygenase; 38.2 24 0.00081 32.5 3.7 39 26-69 357-397 (549)
243 3kd9_A Coenzyme A disulfide re 38.2 36 0.0012 30.1 4.9 42 25-68 72-114 (449)
244 2v3a_A Rubredoxin reductase; a 36.2 21 0.00072 30.9 2.9 41 26-69 74-114 (384)
245 1y56_A Hypothetical protein PH 35.7 36 0.0012 30.7 4.5 57 12-68 159-219 (493)
246 1zk7_A HGII, reductase, mercur 35.5 62 0.0021 28.7 6.0 40 26-68 109-150 (467)
247 4eqs_A Coenzyme A disulfide re 35.2 55 0.0019 29.0 5.5 43 26-68 71-116 (437)
248 1w4x_A Phenylacetone monooxyge 35.0 34 0.0012 31.3 4.3 37 27-68 353-391 (542)
249 3l8k_A Dihydrolipoyl dehydroge 35.0 83 0.0028 27.9 6.8 40 26-68 103-144 (466)
250 1lqt_A FPRA; NADP+ derivative, 34.3 29 0.001 31.0 3.6 43 26-68 266-326 (456)
251 1ok0_A Tendamistat, alpha-amyl 34.0 66 0.0023 20.3 4.0 37 24-60 8-48 (74)
252 2xve_A Flavin-containing monoo 33.3 33 0.0011 30.7 3.8 31 33-67 245-275 (464)
253 2hqm_A GR, grase, glutathione 33.2 61 0.0021 29.0 5.6 41 25-68 118-160 (479)
254 3fg2_P Putative rubredoxin red 32.7 46 0.0016 28.9 4.6 39 26-67 71-109 (404)
255 2eq6_A Pyruvate dehydrogenase 31.8 58 0.002 29.0 5.2 39 25-69 106-144 (464)
256 2dig_A Lamin-B receptor; tudor 31.3 78 0.0027 19.8 4.0 30 25-54 24-53 (68)
257 2gv8_A Monooxygenase; FMO, FAD 30.8 46 0.0016 29.4 4.3 39 28-68 253-292 (447)
258 3nk4_C ZONA pellucida 3; ferti 29.4 27 0.00093 17.2 1.4 11 52-62 7-17 (30)
259 4gcm_A TRXR, thioredoxin reduc 29.2 59 0.002 26.8 4.5 38 192-233 270-307 (312)
260 4a5l_A Thioredoxin reductase; 29.2 66 0.0023 26.4 4.8 38 192-233 276-313 (314)
261 1n4w_A CHOD, cholesterol oxida 29.1 62 0.0021 29.3 4.9 45 25-69 235-289 (504)
262 2cul_A Glucose-inhibited divis 29.0 46 0.0016 26.3 3.7 34 191-230 197-230 (232)
263 3nks_A Protoporphyrinogen oxid 28.7 45 0.0015 29.6 3.9 32 192-229 441-472 (477)
264 4a9w_A Monooxygenase; baeyer-v 28.4 23 0.00079 29.8 1.8 35 29-67 250-284 (357)
265 2ker_A Parvulustat, alpha-amyl 27.9 96 0.0033 19.8 4.0 37 24-60 6-46 (78)
266 2jbv_A Choline oxidase; alcoho 27.3 60 0.0021 29.7 4.5 43 25-67 222-272 (546)
267 2gag_A Heterotetrameric sarcos 26.4 62 0.0021 32.1 4.7 45 25-69 329-384 (965)
268 4b63_A L-ornithine N5 monooxyg 24.1 56 0.0019 29.5 3.6 48 27-74 354-415 (501)
269 1kdg_A CDH, cellobiose dehydro 24.0 91 0.0031 28.4 5.1 44 25-68 209-261 (546)
270 1cjc_A Protein (adrenodoxin re 23.6 80 0.0028 28.1 4.5 36 193-233 360-396 (460)
271 1coy_A Cholesterol oxidase; ox 22.6 1E+02 0.0035 27.8 5.1 44 25-68 240-293 (507)
272 3qvp_A Glucose oxidase; oxidor 22.3 1.4E+02 0.0047 27.7 5.9 45 25-69 240-295 (583)
273 1s3e_A Amine oxidase [flavin-c 20.9 83 0.0029 28.3 4.1 38 193-233 419-456 (520)
274 1b37_A Protein (polyamine oxid 20.9 83 0.0028 27.9 4.1 38 193-233 423-460 (472)
275 1d3b_A Protein (small nuclear 20.4 1.3E+02 0.0045 19.1 3.9 24 42-66 15-38 (75)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.6e-37 Score=282.78 Aligned_cols=268 Identities=23% Similarity=0.367 Sum_probs=223.4
Q ss_pred ccceeeeHHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhh-CCC-CCcccc
Q 021261 6 HEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWL-GFK-NPAFVG 83 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l-~~~-~~~~~~ 83 (315)
...+.++|..|.+.|.+++..++|+++++|++++.++++++|++++|++++||+||+|||.+|.||+.+ +.. .+.+.+
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~ 198 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAG 198 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEE
T ss_pred CceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccC
Confidence 457889999999999999877999999999999999999999999999999999999999999999999 775 566777
Q ss_pred ceEEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCCChHHHHH
Q 021261 84 RSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAV 163 (315)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (315)
+..+.+.++.+........+..+++++.+++++|.+++...|.+....+.. ...+.+...+.+.+.+.++.+.+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~ 275 (407)
T 3rp8_A 199 YVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDRDTLRADLSRYFAGWAPPVQKL 275 (407)
T ss_dssp EEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---CSCCTTTHHHHHHHHTTTCCHHHHHH
T ss_pred cEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC---CCCCchhHHHHHHHHhcCCChHHHHH
Confidence 788888877665444455667778899999999999999888877754332 23345677889999999999999988
Q ss_pred HHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCCCCCCchh
Q 021261 164 IEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEE 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~ 243 (315)
+..........+.+....+. ++|..+||+|||||||.++|++|||+|+||+||..|+++|.. .
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~---~---------- 338 (407)
T 3rp8_A 276 IAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQ---T---------- 338 (407)
T ss_dssp HHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHS---C----------
T ss_pred HHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhc---C----------
Confidence 87765332211222222222 478999999999999999999999999999999999999985 1
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHHHHH
Q 021261 244 EFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILASF 296 (315)
Q Consensus 244 ~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~~~ 296 (315)
. ..+.+|+.|+++|++++..+++.++.+..+++..++.....|+..|+..
T Consensus 339 --~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 339 --R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREE 388 (407)
T ss_dssp --C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHSC
T ss_pred --C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHhhc
Confidence 1 4688999999999999999999999999999999999999999999744
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=5.6e-35 Score=265.71 Aligned_cols=271 Identities=21% Similarity=0.241 Sum_probs=187.0
Q ss_pred ccceeeeHHHHHHHHHhhCCCCcEEecceEEEEEeeCC-eeEEEecCCCEEeecEEEecCCCchhhhhhhCCC-CCcccc
Q 021261 6 HEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFK-NPAFVG 83 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~-~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~-~~~~~~ 83 (315)
...+.|+|..|.+.|.+.++ .+|++|++|++++..++ +++|+++||++++||+||||||.+|.||+.++.. ...+.+
T Consensus 104 ~~~~~i~R~~L~~~L~~~~~-~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~ 182 (412)
T 4hb9_A 104 EQRLSISRTELKEILNKGLA-NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVG 182 (412)
T ss_dssp -CEEEEEHHHHHHHHHTTCT-TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEE
T ss_pred ccceEeeHHHHHHHHHhhcc-ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccccccc
Confidence 44578999999999998875 57999999999998655 5999999999999999999999999999999655 444566
Q ss_pred ceEEEeeeecCCCC------CC-CCceEEEec--CCeEEEE---Ee--------cC--CCeEEEEEEeeCCCCC-ccccc
Q 021261 84 RSAIRGYSDFKGSH------GF-EPNFLQFFG--KGLRSGF---IP--------CD--DQTIYWFFTWTSSSQD-KELED 140 (315)
Q Consensus 84 ~~~~~~~~~~~~~~------~~-~~~~~~~~~--~~~~~~~---~p--------~~--~~~~~~~~~~~~~~~~-~~~~~ 140 (315)
...+.+........ .+ ......+.. ++..+.. .| .. ++...|......+... .....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (412)
T 4hb9_A 183 VSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDF 262 (412)
T ss_dssp EEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGC
T ss_pred eeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEeccccccccccccc
Confidence 67777665543210 00 000111111 1111111 11 11 1122333333222222 22345
Q ss_pred ChHHHHHHHHHHhcCCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHH
Q 021261 141 HSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDG 220 (315)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da 220 (315)
+.+...+.+.+.+.+|.+.+..++...+...+..+.+....+. .+|..|||+|||||||+++|+.|||+|+||+||
T Consensus 263 ~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA 338 (412)
T 4hb9_A 263 SAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHL----LPWKSSTVTLLGDAIHNMTPMTGSGANTALRDA 338 (412)
T ss_dssp CHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCC----CCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCChHHHHHHHhcccceeccchhcccccc----ccccccCEEEEEcccccCCCchhhHHHHHHHHH
Confidence 6778889999999999999999998876555444444433333 378999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh--hccCchHHHHHHHHHHH
Q 021261 221 IVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSI--QQSDGKILNFLRDKILA 294 (315)
Q Consensus 221 ~~La~~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~--~~~~~~~~~~~r~~~l~ 294 (315)
..|+++|..++.+ .++++.+|+.|+++|++++..+++.|.++... ++...+.. ..|+..++
T Consensus 339 ~~La~~L~~~~~~------------~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~r~~~~~ 401 (412)
T 4hb9_A 339 LLLTQKLASVASG------------HEELVKAISDYEQQMRAYANEIVGISLRSAQNAVIHFSIPPL-KQRHLSIR 401 (412)
T ss_dssp HHHHHHHHHHHTT------------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------
T ss_pred HHHHHHHHHHhcC------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH-HHHHHHHh
Confidence 9999999998776 24678899999999999999999999887653 34444433 33555444
No 3
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=8.4e-33 Score=250.85 Aligned_cols=259 Identities=17% Similarity=0.134 Sum_probs=194.5
Q ss_pred cceeeeHHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCCCCCccccceE
Q 021261 7 EMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRSA 86 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~~~~~~~~~~ 86 (315)
....++|..|.+.|.+++++++|+++++|++++.++++++|++.+|++++||+||+|||.+|.+|+.++...+.+.+..+
T Consensus 121 ~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~g~~~ 200 (398)
T 2xdo_A 121 DNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKVRKFVTDTEVEETGTFN 200 (398)
T ss_dssp SCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCCCEEEEEEE
T ss_pred CCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhHHhhccCCCceEcceEE
Confidence 34579999999999999888899999999999998888999999999999999999999999999999766666767777
Q ss_pred EEeeeecCCC-CC-----CCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcc----cccChHHHHHHHHHHhcCC
Q 021261 87 IRGYSDFKGS-HG-----FEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKE----LEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 87 ~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 156 (315)
+.+.+..... .+ .+....++++++..+.++|.+++...|++.+..+..... ...+++...+.+.+.+.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 280 (398)
T 2xdo_A 201 IQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDW 280 (398)
T ss_dssp EEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTS
T ss_pred EEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCC
Confidence 7766542110 00 112233456777777788999888777766643322111 1245677888899999999
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCC-C--cEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISR-G--SVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
.+.+..++... ..+..+++...+.. .+|.. + ||+|||||||.++|++|||+|+||+||..|+++|... .
T Consensus 281 ~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~ 352 (398)
T 2xdo_A 281 DERYKELIHTT--LSFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--K 352 (398)
T ss_dssp CHHHHHHHHHC--SCCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--C
T ss_pred ChHHHHHHhCc--ccceeeeeEeccCC----CCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--c
Confidence 98888888762 22333333332221 25654 5 9999999999999999999999999999999999762 1
Q ss_pred cCCCCCCchhhhhHH-HHHHHHHHHHhhhhhHHHHHHHHHHhhhh-hccCchHHH
Q 021261 234 KQGVGEEDEEEFNKR-VEMGLKRYAKERRWRCFELISIAYLVGSI-QQSDGKILN 286 (315)
Q Consensus 234 ~~~~~~~~~~~s~~~-~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~-~~~~~~~~~ 286 (315)
.+ .+.+|+.|+++|++++...+..+..+... +....+...
T Consensus 353 -------------~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~ 394 (398)
T 2xdo_A 353 -------------FNSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPDFTFQQ 394 (398)
T ss_dssp -------------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC--
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 13 68899999999999999999998887754 555554443
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=4.1e-32 Score=252.59 Aligned_cols=258 Identities=17% Similarity=0.110 Sum_probs=191.6
Q ss_pred ceeeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCC---EEeecEEEecCCCchhhhhhhCCCCCcc-
Q 021261 8 MRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGT---ILKTKVLIGCDGVNSIVAKWLGFKNPAF- 81 (315)
Q Consensus 8 ~~~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~---~~~ad~vVgADG~~S~vr~~l~~~~~~~- 81 (315)
.+.++|..|.+.|.+++. +++|+++++|+++++++++++|++++++ +++||+||||||.+|.||+.+|++.+..
T Consensus 101 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~ 180 (499)
T 2qa2_A 101 VKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTS 180 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEEC
T ss_pred eEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCC
Confidence 588999999999999773 5999999999999999889999998876 8999999999999999999998875543
Q ss_pred ccceEEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCC-CCcccccChHHHHHHHHHHhcCCChHH
Q 021261 82 VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSS-QDKELEDHSAELKQFVLGKLHDLPAQV 160 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
.....+.+.+..+.. +..+.+++.++++++++|.+++.+++.+...... .......+.+++.+.+.+.+.....
T Consensus 181 ~~~~~~~~~v~~~~~---~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 255 (499)
T 2qa2_A 181 ASREMFLADIRGCEI---TPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDIS-- 255 (499)
T ss_dssp CCCCEEEEEEESCCC---CCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCT--
T ss_pred CccEEEEEEEEECCC---CcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCC--
Confidence 234455555554422 2224556677788889999988765554432221 1112345677777777766542110
Q ss_pred HHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCCCCCC
Q 021261 161 KAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEE 240 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~ 240 (315)
.........++. .....++|..|||+|+|||||.++|++|||+|+||+||.+|++.|...+.+.
T Consensus 256 -----~~~~~~~~~~~~-----~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~------ 319 (499)
T 2qa2_A 256 -----HGEPVWVSAFGD-----PARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGR------ 319 (499)
T ss_dssp -----TCEEEEEEEECC-----CEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTS------
T ss_pred -----ccceeEEEEEeC-----CcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCC------
Confidence 000011111221 1223457889999999999999999999999999999999999999988652
Q ss_pred chhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHHH
Q 021261 241 DEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 294 (315)
Q Consensus 241 ~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~ 294 (315)
..+.+|+.|+++|+++...+++.+..+..++.. ++....+|+..+.
T Consensus 320 -------~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~ 365 (499)
T 2qa2_A 320 -------APAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS-GDEMQPLRDVLSE 365 (499)
T ss_dssp -------SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CGGGHHHHHHHHH
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Confidence 346789999999999999999999998888874 5566777776654
No 5
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=5.2e-32 Score=252.02 Aligned_cols=259 Identities=20% Similarity=0.148 Sum_probs=190.6
Q ss_pred cceeeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCC---EEeecEEEecCCCchhhhhhhCCCCCcc
Q 021261 7 EMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGT---ILKTKVLIGCDGVNSIVAKWLGFKNPAF 81 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~---~~~ad~vVgADG~~S~vr~~l~~~~~~~ 81 (315)
..+.++|..|.+.|.+++. +++|+++++|+++++++++++|++++++ +++||+||||||.+|.||+.+|++.+..
T Consensus 99 ~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~ 178 (500)
T 2qa1_A 99 AAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGT 178 (500)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEE
T ss_pred ceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCC
Confidence 3588999999999999773 5999999999999999999999998876 8999999999999999999998875543
Q ss_pred -ccceEEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCC-CcccccChHHHHHHHHHHhcCCChH
Q 021261 82 -VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQ-DKELEDHSAELKQFVLGKLHDLPAQ 159 (315)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (315)
.....+.+.+..... +..+.+++.++++++++|.+++..++.+....... ......+.+++.+.+.+.+.....
T Consensus 179 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 254 (500)
T 2qa1_A 179 AATMEMYLADIKGVEL---QPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIA- 254 (500)
T ss_dssp CCCCEEEEEEEESCCC---CCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCT-
T ss_pred ccceEEEEEEEEeCCC---CCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCC-
Confidence 234555555554422 22245566777888899999887555444322211 112345677777777766542110
Q ss_pred HHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCCCCC
Q 021261 160 VKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGE 239 (315)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~ 239 (315)
.........++. .....++|..|||+|+|||||.++|++|||+|+||+||.+|++.|...+.+.
T Consensus 255 ------~~~~~~~~~~~~-----~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~----- 318 (500)
T 2qa1_A 255 ------HAEPVWVSAFGN-----ATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT----- 318 (500)
T ss_dssp ------TSEEEEEEEEEC-----CEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTS-----
T ss_pred ------ccceeEEEEecc-----CcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCC-----
Confidence 000011111211 1223457889999999999999999999999999999999999999988652
Q ss_pred CchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHHH
Q 021261 240 EDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILA 294 (315)
Q Consensus 240 ~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~ 294 (315)
..+.+|+.|+++|+++...+++.+..+..++.. ++....+|+..+.
T Consensus 319 --------~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~ 364 (500)
T 2qa1_A 319 --------ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTE 364 (500)
T ss_dssp --------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CGGGHHHHHHHHH
T ss_pred --------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHH
Confidence 357899999999999999999999998888874 5566777776553
No 6
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=4.7e-32 Score=245.85 Aligned_cols=257 Identities=16% Similarity=0.161 Sum_probs=186.9
Q ss_pred eeeHHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCCC-CCccccceEEE
Q 021261 10 CVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFK-NPAFVGRSAIR 88 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~-~~~~~~~~~~~ 88 (315)
.+.|..|.+.|.+.+++++|+++++|++++.++++++|++++|++++||+||+|||.+|.||+.++ + .+.+.++.++.
T Consensus 95 ~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~ 173 (397)
T 2vou_A 95 FTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GIEPTYAGYVTWR 173 (397)
T ss_dssp EEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CCCCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHHhc-cCCCCccceEEEE
Confidence 578899999999998889999999999999988889999999999999999999999999999998 4 44556667777
Q ss_pred eeeecCCCCC-----CCCceEEEecCCeEEEEEecCCC------eEEEEEEeeCCCCC--ccc---------------cc
Q 021261 89 GYSDFKGSHG-----FEPNFLQFFGKGLRSGFIPCDDQ------TIYWFFTWTSSSQD--KEL---------------ED 140 (315)
Q Consensus 89 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~--~~~---------------~~ 140 (315)
+.+....... +...+.++.+++.++.++|++++ ...|......+... ... ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (397)
T 2vou_A 174 GVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNS 253 (397)
T ss_dssp EEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGG
T ss_pred EEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCccc
Confidence 7765322111 11234566678888888888754 44444443322210 000 00
Q ss_pred ChHHHHHHHHHHh-cCCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhH
Q 021261 141 HSAELKQFVLGKL-HDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALED 219 (315)
Q Consensus 141 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~d 219 (315)
..++..+.+.+.+ ..+++ +.+++...+. ...+++... ..++|..|||+|||||||.++|+.|||+|+||+|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-----~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~D 325 (397)
T 2vou_A 254 LNPHNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-----TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDD 325 (397)
T ss_dssp CCHHHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-----CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-----cCCceecCcEEEEeccccccCCcchhhHHHHHHH
Confidence 0223345555555 35666 7777765431 123344332 2347899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHH
Q 021261 220 GIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKIL 293 (315)
Q Consensus 220 a~~La~~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l 293 (315)
|..|+++|.. . .+.+.+|+.|+++|++++..+++.++.+..+++.+ .....|+..|
T Consensus 326 A~~La~~L~~---~-------------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~--~~~~~~d~~~ 381 (397)
T 2vou_A 326 ARTLAEVFTK---N-------------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQHG--GSFEPGNPAF 381 (397)
T ss_dssp HHHHHHHHHH---C-------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CCCCTTCGGG
T ss_pred HHHHHHHHhc---C-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccCCCCChhH
Confidence 9999999975 2 14678999999999999999999999999988765 2334444433
No 7
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.7e-33 Score=250.79 Aligned_cols=263 Identities=17% Similarity=0.220 Sum_probs=194.1
Q ss_pred ceeeeHHHHHHHHHhhCC---CCcEEecceEEEEEeeCCee--EEEecCCCEEeecEEEecCCCchhhhhhhCCCC-Cc-
Q 021261 8 MRCVRRKLLLETLAKELP---SGTIRYSSQVVSIEESGHFK--LLHLADGTILKTKVLIGCDGVNSIVAKWLGFKN-PA- 80 (315)
Q Consensus 8 ~~~i~R~~L~~~L~~~~~---~~~i~~~~~v~~~~~~~~~~--~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~~-~~- 80 (315)
.+.++|..|.+.|.+++. +++|+++++|++++.+++++ .|++++|++++||+||+|||.+|.+|+.+++.. +.
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~ 180 (399)
T 2x3n_A 101 FILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERR 180 (399)
T ss_dssp EEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCC
T ss_pred cccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccC
Confidence 468999999999999874 57999999999999988888 899999999999999999999999999998753 33
Q ss_pred -cccc--eEEEeeeecCCCCCCCCceEEEecC-CeEEEEEecCCCeEEEEEEeeCCCCCccc--ccChHHHHHHHHHHhc
Q 021261 81 -FVGR--SAIRGYSDFKGSHGFEPNFLQFFGK-GLRSGFIPCDDQTIYWFFTWTSSSQDKEL--EDHSAELKQFVLGKLH 154 (315)
Q Consensus 81 -~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 154 (315)
+.+. .++.+.++.+.+ ... .++++ +++++++|.+++.+.|.+.+..+. .... ..+.++ +.+.+.
T Consensus 181 p~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~ 250 (399)
T 2x3n_A 181 PYPSPMLVGTFALAPCVAE----RNR-LYVDSQGGLAYFYPIGFDRARLVVSFPREE-ARELMADTRGES----LRRRLQ 250 (399)
T ss_dssp CCSSCEEEEEEECCHHHHH----CEE-EEECTTSCEEEEEEETTTEEEEEEECCHHH-HHHHHHSTTSHH----HHHHHH
T ss_pred CCCCCceEEEEEEecCCCC----Ccc-EEEcCCCcEEEEEEcCCCEEEEEEEeCccc-cccccccCCHHH----HHHHHh
Confidence 5566 666666554311 113 55677 788889999998877776542211 0011 123434 444444
Q ss_pred CCChHHH-HHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 155 DLPAQVK-AVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
.+.+.+. ..++.........+++... ...++|..+||+|||||||.++|++|||+|+||+||..|+++|...+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~ 326 (399)
T 2x3n_A 251 RFVGDESAEAIAAVTGTSRFKGIPIGY----LNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRD 326 (399)
T ss_dssp TTCCGGGHHHHHTCCCSTTCEECCCCC----EECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCcchhhHHhcCCccceEEechhhc----ccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcc
Confidence 6666662 2333332112334444331 2234788999999999999999999999999999999999999987653
Q ss_pred cCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHHHHHH
Q 021261 234 KQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILASFL 297 (315)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~~~~ 297 (315)
..+.+.+|+.|+++|++++...++.++.+..++...++....+ +..++.+.
T Consensus 327 ------------~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~ 377 (399)
T 2x3n_A 327 ------------ACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF-DTALQGSS 377 (399)
T ss_dssp ------------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC------
T ss_pred ------------cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcccCchHHHH-HHHHhhhc
Confidence 1245889999999999999999999999999999998888888 88887543
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.97 E-value=1.3e-31 Score=252.49 Aligned_cols=261 Identities=18% Similarity=0.078 Sum_probs=184.0
Q ss_pred cceeeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEe--cCC-CEEeecEEEecCCCchhhhhhhCCCCCcc
Q 021261 7 EMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHL--ADG-TILKTKVLIGCDGVNSIVAKWLGFKNPAF 81 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~--~~g-~~~~ad~vVgADG~~S~vr~~l~~~~~~~ 81 (315)
..+.++|..|.+.|.+++. +++|+++++|++++.++++++|++ .+| ++++||+||+|||.+|.||+.+|+..+..
T Consensus 141 ~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~ 220 (570)
T 3fmw_A 141 YTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGT 220 (570)
T ss_dssp SBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCC
T ss_pred eeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccc
Confidence 3577999999999999873 589999999999999988888888 677 68999999999999999999998875543
Q ss_pred -ccceEEEeeeecCCCCCCCCceEEEecCCeEEEE-EecCCCeE-EEEEEeeCCCC-CcccccChHHHHHHHHHHhcCCC
Q 021261 82 -VGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGF-IPCDDQTI-YWFFTWTSSSQ-DKELEDHSAELKQFVLGKLHDLP 157 (315)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
....++.+.+...... .. +.+.+...+++++ +|.+++.. .+++....... ......+.+++.+.+.+.+...
T Consensus 221 ~~~~~~~~~~v~~~~~~-~~--~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 296 (570)
T 3fmw_A 221 EATVRALIGYVTTPERE-VP--RRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTP- 296 (570)
T ss_dssp CCCEEEEEEECCCCSCS-SC--CCCCCCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCC-
T ss_pred eeeeEEEEEEEEecCCC-cc--eEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcc-
Confidence 3444555554444332 11 2222344445545 79988865 45444432221 1223445555555554433211
Q ss_pred hHHHHHHHcCCCc-ceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 158 AQVKAVIEKTPLD-SIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
+...... ....+++.. ...++|..+||+|+|||||.++|++|||+|+||+||..|++.|..++.+.
T Consensus 297 ------~~~~~~~~~~~~~~~~~-----~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~-- 363 (570)
T 3fmw_A 297 ------LTLTEPVSWLSRFGDAS-----RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGW-- 363 (570)
T ss_dssp ------CCCCSCCEEEEEECCCC-----EECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred ------cccceeeeeeEEeeccc-----ccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCC--
Confidence 1111111 222333322 23457899999999999999999999999999999999999999987653
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCchHHHHHHHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDGKILNFLRDKILAS 295 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~r~~~l~~ 295 (315)
..+.+|+.|+++|+++...++..+..+..+++..++....+|+.++..
T Consensus 364 -----------~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l 411 (570)
T 3fmw_A 364 -----------GSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEEL 411 (570)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHH
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 457899999999999999999999999999988766588899988764
No 9
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.97 E-value=3.2e-30 Score=233.53 Aligned_cols=267 Identities=15% Similarity=0.123 Sum_probs=181.3
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeC-CeeEEEe-cCCC--EEeecEEEecCCCchhhhhhhCCC-C
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESG-HFKLLHL-ADGT--ILKTKVLIGCDGVNSIVAKWLGFK-N 78 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~~~v~~-~~g~--~~~ad~vVgADG~~S~vr~~l~~~-~ 78 (315)
...+.++|..|.+.|.+++ .+++|+++++|++++.++ +++.|++ .+|+ +++||+||+|||.+|.+|+.++.. .
T Consensus 95 ~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~ 174 (394)
T 1k0i_A 95 KTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERL 174 (394)
T ss_dssp CCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGC
T ss_pred CceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCcccc
Confidence 4456788999999988876 469999999999998864 5688888 7887 799999999999999999999765 2
Q ss_pred Cccccc--eEEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCC
Q 021261 79 PAFVGR--SAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 79 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
+.+.+. ..+.+.+...... .....+...++++.++.|..++...|++....... ....+.+++.+.+.+.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~-- 248 (394)
T 1k0i_A 175 KVFERVYPFGWLGLLADTPPV--SHELIYANHPRGFALCSQRSATRSQYYVQVPLSEK--VEDWSDERFWTELKARLP-- 248 (394)
T ss_dssp EEEEEEEEEEEEEEEESSCCS--CSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCC--GGGCCHHHHHHHHHHTSC--
T ss_pred ccccccccceeEEEecCCCCC--ccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCC--ccccCHHHHHHHHHHhhC--
Confidence 333332 2333433222111 12222223445555555656666666665543221 122345556666666543
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
......+...+......+++.. ...++|..+||+|||||||+++|+.|||+|+||+||..|+++|..++..
T Consensus 249 -~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~--- 319 (394)
T 1k0i_A 249 -SEVAEKLVTGPSLEKSIAPLRS-----FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRE--- 319 (394)
T ss_dssp -HHHHHHCCCCCEEEEEEEEEEE-----EEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred -cccccccccCcceeeEEEEhhh-----hhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhcc---
Confidence 2222111111110111222221 2245688999999999999999999999999999999999999887653
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc---cCchHHHHHHHHHHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ---SDGKILNFLRDKILASFLV 298 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~---~~~~~~~~~r~~~l~~~~~ 298 (315)
..+.+|+.|+++|++++...++.+..+..+++ ...++...+|+..|..+..
T Consensus 320 -----------~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~ 373 (394)
T 1k0i_A 320 -----------GRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLG 373 (394)
T ss_dssp -----------CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcC
Confidence 23568999999999999999999988887776 3467888889988875543
No 10
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.97 E-value=1.6e-30 Score=249.30 Aligned_cols=252 Identities=17% Similarity=0.177 Sum_probs=176.1
Q ss_pred ccceeeeHHHHHHHHHhhCC-----CCcEEecceEEEEEeeC--------CeeEEEec----------------------
Q 021261 6 HEMRCVRRKLLLETLAKELP-----SGTIRYSSQVVSIEESG--------HFKLLHLA---------------------- 50 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~-----~~~i~~~~~v~~~~~~~--------~~~~v~~~---------------------- 50 (315)
+..+.++|..|++.|.+++. +++|+++++|++++.++ ++|+|++.
T Consensus 111 ~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (665)
T 1pn0_A 111 YHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFR 190 (665)
T ss_dssp SCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCC
T ss_pred CeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccc
Confidence 45678999999999999873 37999999999998875 35777764
Q ss_pred --------------------CC--CEEeecEEEecCCCchhhhhhhCCCCCccccceEEEeeeecC--CCCC-CCCceEE
Q 021261 51 --------------------DG--TILKTKVLIGCDGVNSIVAKWLGFKNPAFVGRSAIRGYSDFK--GSHG-FEPNFLQ 105 (315)
Q Consensus 51 --------------------~g--~~~~ad~vVgADG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~ 105 (315)
+| ++++|||||||||.+|.||+.+|++.+...... .+++++.. ...+ ....+.+
T Consensus 191 ~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~-~~~v~d~~~~~~~p~~~~~~~~ 269 (665)
T 1pn0_A 191 SNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY-IWGVLDAVPASNFPDIRSRCAI 269 (665)
T ss_dssp CHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE-EEEEEEEEEECCCTTTTSEEEE
T ss_pred ccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE-EEEEEEEEECCCCCCcceEEEE
Confidence 34 479999999999999999999988754432222 22333321 1111 1122333
Q ss_pred EecCCeEEEEEecCCCeEEEEEEeeCCCCC----cccccChHHHHHHHHHHhcCCChHHHHHHHcCCCcceeeccccccC
Q 021261 106 FFGKGLRSGFIPCDDQTIYWFFTWTSSSQD----KELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQ 181 (315)
Q Consensus 106 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
+..+++.++++|.+++.++|++.+...... .....+.+++.+.+.+.+..+...+ .....+..+++.
T Consensus 270 ~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--- 340 (665)
T 1pn0_A 270 HSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDV------QQLDWFTAYHIG--- 340 (665)
T ss_dssp ECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCEE------EEEEEEEEEEEE---
T ss_pred EeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccCce------eeEEEEEeeecc---
Confidence 333567778999999877676665433211 1233567777777766654322110 000111122211
Q ss_pred cccccccCcC-CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhh
Q 021261 182 PQEVLWGNIS-RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKER 260 (315)
Q Consensus 182 ~~~~~~~~~~-~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r 260 (315)
...+++|. .|||+|+|||||.++|++|||+|+||+||.+|++.|..++.+. ..+.+|+.|+++|
T Consensus 341 --~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~-------------a~~~lL~tYe~eR 405 (665)
T 1pn0_A 341 --QRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR-------------AKRDILKTYEEER 405 (665)
T ss_dssp --EEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC-------------BCGGGGHHHHHHH
T ss_pred --ceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC-------------CcHHHHHHHHHHH
Confidence 12345787 7999999999999999999999999999999999999988753 3467899999999
Q ss_pred hhhHHHHHHHHHHhhhhhccCc
Q 021261 261 RWRCFELISIAYLVGSIQQSDG 282 (315)
Q Consensus 261 ~~~~~~~~~~s~~~~~~~~~~~ 282 (315)
+++.+.+++.++.+..++...+
T Consensus 406 ~p~a~~~i~~s~~~~~l~~~~~ 427 (665)
T 1pn0_A 406 QPFAQALIDFDHQFSRLFSGRP 427 (665)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999987543
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.97 E-value=1.9e-29 Score=237.10 Aligned_cols=249 Identities=18% Similarity=0.178 Sum_probs=176.9
Q ss_pred cceeeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCC----eeEEEecCC---CEEeecEEEecCCCchhhhhhhCCC
Q 021261 7 EMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGH----FKLLHLADG---TILKTKVLIGCDGVNSIVAKWLGFK 77 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~----~~~v~~~~g---~~~~ad~vVgADG~~S~vr~~l~~~ 77 (315)
....++|..|.+.|.+++. +++|+++++|++++.+++ +++|++.++ .+++||+||+|||.+|.||+.+|++
T Consensus 113 ~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~ 192 (535)
T 3ihg_A 113 GWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIG 192 (535)
T ss_dssp CCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCC
Confidence 3678999999999999873 599999999999999988 899999887 6899999999999999999999887
Q ss_pred CCccccc-eEEEeeeec--CCCCCCC-CceEEEecCCeEEEEEecCCCeEEEEEEee--CCCCCcccccChHHHHHHHHH
Q 021261 78 NPAFVGR-SAIRGYSDF--KGSHGFE-PNFLQFFGKGLRSGFIPCDDQTIYWFFTWT--SSSQDKELEDHSAELKQFVLG 151 (315)
Q Consensus 78 ~~~~~~~-~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 151 (315)
.+..... ..+...+.. +...... ..+..++.++....++|++++.. |.+.+. .+........+.+++.+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~l~~ 271 (535)
T 3ihg_A 193 RYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDR-HTLFVEYDPDEGERPEDFTPQRCVELIGL 271 (535)
T ss_dssp EEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTE-EEEEEEECTTTTCCGGGCCHHHHHHHHHH
T ss_pred cCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCE-EEEEEeeCccccCccccCCHHHHHHHHHH
Confidence 5433211 111112222 1111111 12344456666777889987433 444432 222122344567777777777
Q ss_pred HhcCCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHH
Q 021261 152 KLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEAL 231 (315)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~ 231 (315)
.+....... +......+++. ....++|..|||+|+|||||.++|++|||+|+||+||..|++.|..++
T Consensus 272 ~~~~~~~~~-------~~~~~~~~~~~-----~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l 339 (535)
T 3ihg_A 272 ALDAPEVKP-------ELVDIQGWEMA-----ARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVL 339 (535)
T ss_dssp HHTCSSCCC-------EEEEEEEEEEE-----EEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCce-------eEEEeeEeeee-----EEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHh
Confidence 665321110 00111222222 233467899999999999999999999999999999999999999988
Q ss_pred hccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccC
Q 021261 232 KTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSD 281 (315)
Q Consensus 232 ~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 281 (315)
.+. ..+.+|+.|+++|++++..+++.|..+...+..+
T Consensus 340 ~g~-------------~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~ 376 (535)
T 3ihg_A 340 QGQ-------------AGAGLLDTYEDERKVAAELVVAEALAIYAQRMAP 376 (535)
T ss_dssp TTS-------------SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred cCC-------------CcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc
Confidence 753 3467899999999999999999999888766443
No 12
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.97 E-value=7.2e-30 Score=240.37 Aligned_cols=260 Identities=18% Similarity=0.149 Sum_probs=176.6
Q ss_pred ccceeeeHHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecC---C--CEEeecEEEecCCCchhhhhhhCCCCCc
Q 021261 6 HEMRCVRRKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---G--TILKTKVLIGCDGVNSIVAKWLGFKNPA 80 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~---g--~~~~ad~vVgADG~~S~vr~~l~~~~~~ 80 (315)
...+.++|..|.+.|.+++... |+++++|++++.++++++|++.+ | .+++||+||||||.+|.||+.+|++.+.
T Consensus 130 ~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g 208 (549)
T 2r0c_A 130 EPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPP 208 (549)
T ss_dssp SCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCB
T ss_pred CcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCC
Confidence 3458899999999999987555 99999999999998888888876 6 4799999999999999999999887544
Q ss_pred cc-cceEEEeeeecCCC----CCCCCceEEEecCC-eEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhc
Q 021261 81 FV-GRSAIRGYSDFKGS----HGFEPNFLQFFGKG-LRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLH 154 (315)
Q Consensus 81 ~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (315)
.. ....+...+..+.. ...+..+.++++++ ..+.++|.+++.. |.+.+..+.. . .+.+++.+.+.+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~-~~~~~~~~~~---~-~~~~~~~~~l~~~~~ 283 (549)
T 2r0c_A 209 RHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGL-YRLTVGVDDA---S-KSTMDSFELVRRAVA 283 (549)
T ss_dssp SSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSE-EEEEEECSTT---C-CSCCCHHHHHHHHBC
T ss_pred CcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcE-EEEEecCCCC---C-CCHHHHHHHHHHHhC
Confidence 32 22333344443311 00112233444555 6778999976532 4443322211 1 456667777777664
Q ss_pred CCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhcc
Q 021261 155 DLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTK 234 (315)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~ 234 (315)
. ... .+......+++. ...+++|..|||+|+|||||.++|++|||+|+||+||.+|++.|..++.+.
T Consensus 284 ~-~~~-------~~~~~~~~~~~~-----~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~ 350 (549)
T 2r0c_A 284 F-DTE-------IEVLSDSEWHLT-----HRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGW 350 (549)
T ss_dssp S-CCC-------CEEEEEEEEEEC-----CEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred C-CCc-------eeEEEEecchhH-----hhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCC
Confidence 3 100 000111122221 223457889999999999999999999999999999999999999987752
Q ss_pred CCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccC---------chHHHHHHHHHHHHHH
Q 021261 235 QGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSD---------GKILNFLRDKILASFL 297 (315)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~---------~~~~~~~r~~~l~~~~ 297 (315)
..+.+|+.|+++|+++.+.+++.+..+..++... ++....+|+.+...+.
T Consensus 351 -------------a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~ 409 (549)
T 2r0c_A 351 -------------AGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVAEKLE 409 (549)
T ss_dssp -------------SCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHHHHHHH
T ss_pred -------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHHHHHHH
Confidence 3457899999999999999999999998887642 5667777877776554
No 13
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.97 E-value=9.8e-30 Score=231.56 Aligned_cols=239 Identities=23% Similarity=0.292 Sum_probs=169.4
Q ss_pred cceeeeHHHHHHHHHhhCC---C-CcEEecceEEEEEeeCCeeEEEecC---C--CEEeecEEEecCCCchhhhhhhCCC
Q 021261 7 EMRCVRRKLLLETLAKELP---S-GTIRYSSQVVSIEESGHFKLLHLAD---G--TILKTKVLIGCDGVNSIVAKWLGFK 77 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~~---~-~~i~~~~~v~~~~~~~~~~~v~~~~---g--~~~~ad~vVgADG~~S~vr~~l~~~ 77 (315)
+.+.++|..|.+.|.+++. + ++|+++++|++++. +++++|++.+ | .+++||+||||||.+|.||+.++..
T Consensus 100 ~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~ 178 (410)
T 3c96_A 100 PQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPD 178 (410)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTT
T ss_pred CeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCC
Confidence 3578999999999998773 3 68999999999998 7778888876 7 5899999999999999999999654
Q ss_pred --CCccccceEEEeeeecCCCCCCCCceEEEec--CCeEEEEEecCC-------CeEEEEEEeeCCC-----CCcccccC
Q 021261 78 --NPAFVGRSAIRGYSDFKGSHGFEPNFLQFFG--KGLRSGFIPCDD-------QTIYWFFTWTSSS-----QDKELEDH 141 (315)
Q Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~-------~~~~~~~~~~~~~-----~~~~~~~~ 141 (315)
.+.+.+...+.+....+... .....++++ .+..+.++|+.+ ..+.|.+...... ..... .
T Consensus 179 ~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~--~ 254 (410)
T 3c96_A 179 QRPLSHGGITMWRGVTEFDRFL--DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADW--N 254 (410)
T ss_dssp CCCCEEEEEEEEEEEEEESCCT--TSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCT--T
T ss_pred CCCCCcCCeeEEEeeccccccc--CCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCcccc--C
Confidence 24455666666665544221 222334444 356778999863 2455655543211 01111 1
Q ss_pred hHHHHHHHHHHhcCCCh---HHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhh
Q 021261 142 SAELKQFVLGKLHDLPA---QVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALE 218 (315)
Q Consensus 142 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~ 218 (315)
.+...+.+.+.+.+|.. .+..++.... .+..+++....+ .++|..+||+|||||||.++|++|||+|+||+
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~----~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~ 328 (410)
T 3c96_A 255 RDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDP----LPHWGRGRITLLGDAAHLMYPMGANGASQAIL 328 (410)
T ss_dssp CBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCC----CSCCCBTTEEECTHHHHCCCSSTTCTHHHHHH
T ss_pred CCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCC----ccccccCCEEEEecccCCCCCccchhHHHHHH
Confidence 11123555666666643 3455665542 333444433332 24788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 021261 219 DGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAY 272 (315)
Q Consensus 219 da~~La~~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 272 (315)
||..|++.|... . ..+.+|+.|+++|++++..++..++
T Consensus 329 Da~~La~~L~~~--~--------------~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 329 DGIELAAALARN--A--------------DVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHHHHHHHC--S--------------SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc--C--------------CHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999861 1 4678999999999999999998887
No 14
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.97 E-value=1.5e-30 Score=234.60 Aligned_cols=237 Identities=20% Similarity=0.245 Sum_probs=165.8
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCCC-CCccc
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFK-NPAFV 82 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~-~~~~~ 82 (315)
.+.+.++|..|.+.|.+.+ .+++|+++++|++++. ++ +|++++|++++||+||+|||.+|.+|+.++.. .+.+.
T Consensus 99 ~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~ 175 (379)
T 3alj_A 99 LPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVS 175 (379)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEE
T ss_pred CceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcC
Confidence 4468899999999999987 3589999999999988 34 78889999999999999999999999999764 33455
Q ss_pred cceEEEeeeecCC---CCCCCC-ceEE--EecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCC
Q 021261 83 GRSAIRGYSDFKG---SHGFEP-NFLQ--FFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 83 ~~~~~~~~~~~~~---~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
++.++.+.++... +...+. .... +++++++++++|.+++...|++....... . ++++.+.+......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~-----~~~l~~~~~~~~~~~ 249 (379)
T 3alj_A 176 KDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADP-R-----GSSVPIDLEVWVEMF 249 (379)
T ss_dssp EEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTCT-T-----TTCSSCCHHHHHHHC
T ss_pred CcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCCC-C-----HHHHHHHHhcCCchh
Confidence 6667777766531 111112 2222 56778888899999998888776643110 0 111111111111111
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
. .+.+++...+...+..+++.... ..++|..+||+|||||||.++|++|||+|+||+||..|++.|.. .
T Consensus 250 ~-~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~---~--- 318 (379)
T 3alj_A 250 P-FLEPCLIEAAKLKTARYDKYETT----KLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE---G--- 318 (379)
T ss_dssp G-GGHHHHHHHHTCTTCCEEEEEEE----EESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS---S---
T ss_pred c-cHHHHHhhCCccceEEecccccC----CCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc---c---
Confidence 1 11133332111122223332221 13478899999999999999999999999999999999999864 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAY 272 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 272 (315)
.+.+.+|+.|+++|++++...++.+.
T Consensus 319 ----------~~~~~~l~~Y~~~r~~~~~~~~~~s~ 344 (379)
T 3alj_A 319 ----------SSVEDALVAWETRIRPITDRCQALSG 344 (379)
T ss_dssp ----------SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------cCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 14578999999999999999999883
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.96 E-value=5.8e-29 Score=238.01 Aligned_cols=251 Identities=16% Similarity=0.175 Sum_probs=166.5
Q ss_pred ccceeeeHHHHHHHHHhhCC----CCcEEecceEEEEEeeCC----eeEEEec------CC--CEEeecEEEecCCCchh
Q 021261 6 HEMRCVRRKLLLETLAKELP----SGTIRYSSQVVSIEESGH----FKLLHLA------DG--TILKTKVLIGCDGVNSI 69 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~----~~~i~~~~~v~~~~~~~~----~~~v~~~------~g--~~~~ad~vVgADG~~S~ 69 (315)
...+.++|..|.+.|.+++. +++|+++++|++++.+++ +++|+++ +| .+++||+||||||.+|.
T Consensus 133 ~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 133 FPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp SCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred CceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 44578999999999999872 349999999999998763 5788776 45 47999999999999999
Q ss_pred hhhhhCCCCCccccceEEEeeeec---CCCCCCCCceEEEecCCeEEEEEecCCC-eEEEEEEeeC--CCC-CcccccCh
Q 021261 70 VAKWLGFKNPAFVGRSAIRGYSDF---KGSHGFEPNFLQFFGKGLRSGFIPCDDQ-TIYWFFTWTS--SSQ-DKELEDHS 142 (315)
Q Consensus 70 vr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~--~~~-~~~~~~~~ 142 (315)
||+.+|+..+.......+ ++++. ...........+.. ++++++++|.+++ ..++++.+.. ... ......+.
T Consensus 213 vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 290 (639)
T 2dkh_A 213 VRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-EQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITV 290 (639)
T ss_dssp HHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-TTEEEEEEECTTSSCEEEEEECC-----------CCCH
T ss_pred HHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEc-CCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCH
Confidence 999998875433222211 22221 11111112222223 6677889999888 5555554432 111 01223566
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHcCCCcceeeccccccCcccccccCcC------------CCcEEEeccCCCCCCCCCc
Q 021261 143 AELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNIS------------RGSVCVAGDALHPMTPDIG 210 (315)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~LiGDAAh~~~P~~G 210 (315)
+++.+.+.+.+..+...+ .....+..+++. ....++|. .|||+|+|||||.++|++|
T Consensus 291 e~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~G 359 (639)
T 2dkh_A 291 EQLIATAQRVLHPYKLEV------KNVPWWSVYEIG-----QRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAG 359 (639)
T ss_dssp HHHHHHHHHHHTTSCEEE------EEEEEEEEECCC-----CEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGC
T ss_pred HHHHHHHHHHhCcccCcc------eeeeEEEecccc-----cchhhhhhccccccccccCccCcEEEEecccccCCCccc
Confidence 777676666554322110 000111112211 11233555 8999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCc
Q 021261 211 QGGCAALEDGIVLARCINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDG 282 (315)
Q Consensus 211 ~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~ 282 (315)
||+|+||+||.+|++.|+.++.+. ..+.+|+.|+++|+++.+.+++.++.+..++....
T Consensus 360 qG~n~ai~DA~nLawkLa~vl~g~-------------a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~~ 418 (639)
T 2dkh_A 360 QGMNFSMQDSFNLGWKLAAVLRKQ-------------CAPELLHTYSSERQVVAQQLIDFDREWAKMFSDPA 418 (639)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTTS-------------BCGGGGHHHHHHHHHHHHHHHHHHHHSCC------
T ss_pred ccchhhHHHHHHHHHHHHHHHcCC-------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999988753 34578999999999999999999999998887543
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.95 E-value=7.2e-27 Score=218.35 Aligned_cols=257 Identities=14% Similarity=0.124 Sum_probs=180.8
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe---eEEEecCCC--EEeecEEEecCCCchhhhhhhCCCC
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF---KLLHLADGT--ILKTKVLIGCDGVNSIVAKWLGFKN 78 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~---~~v~~~~g~--~~~ad~vVgADG~~S~vr~~l~~~~ 78 (315)
...+.++|..|.+.|.+.+ .+++|+++++|+++..++++ +++...+|+ +++||+||+|||.+|.+|+.+|...
T Consensus 103 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~ 182 (512)
T 3e1t_A 103 GFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERV 182 (512)
T ss_dssp CCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEE
T ss_pred ceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCc
Confidence 4467899999999999877 56999999999999998775 445556675 8999999999999999999997642
Q ss_pred -CccccceEEEeeeecCCCC--CCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcC
Q 021261 79 -PAFVGRSAIRGYSDFKGSH--GFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHD 155 (315)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
..+....++.+++...... +..........++++++++|..++...+.+.+...... ....+.++..+.+. +
T Consensus 183 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~-~~~~~~~~~~~~~l----~ 257 (512)
T 3e1t_A 183 YSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAE-AIKDGHEAALLRYI----D 257 (512)
T ss_dssp ECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHT-TTSSCHHHHHHHHH----H
T ss_pred cCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhh-hhcCCHHHHHHHHH----H
Confidence 2334556777666532211 11222334445667888999999876666665332111 11222333333333 3
Q ss_pred CChHHHHHHHcCCC-cceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhcc
Q 021261 156 LPAQVKAVIEKTPL-DSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTK 234 (315)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~ 234 (315)
+.+.+...+..... .......+.......+..++|..+|++|||||||.++|+.|||+++||+||..|++.|...+.+
T Consensus 258 ~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~- 336 (512)
T 3e1t_A 258 RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAG- 336 (512)
T ss_dssp TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcC-
Confidence 55666666654321 1111122222222222345778999999999999999999999999999999999999997765
Q ss_pred CCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc
Q 021261 235 QGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 279 (315)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 279 (315)
....+.+|+.|++.|+++.....++......+..
T Consensus 337 -----------~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~ 370 (512)
T 3e1t_A 337 -----------EMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQ 370 (512)
T ss_dssp -----------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 2356789999999999999999999888877765
No 17
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.95 E-value=2.2e-27 Score=218.71 Aligned_cols=245 Identities=14% Similarity=0.014 Sum_probs=169.6
Q ss_pred ceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEec---CCC--EEeecEEEecCCCchhhhhhhCCCCC
Q 021261 8 MRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLA---DGT--ILKTKVLIGCDGVNSIVAKWLGFKNP 79 (315)
Q Consensus 8 ~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~---~g~--~~~ad~vVgADG~~S~vr~~l~~~~~ 79 (315)
.+.++|..|.+.|.+++ .+++|+++++|+++..++++++ |.+. +|+ +++||+||+|||.+|.+|+.++...+
T Consensus 94 ~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~ 173 (453)
T 3atr_A 94 GFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELP 173 (453)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSG
T ss_pred cEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCC
Confidence 46799999999999987 4699999999999998887754 6554 665 89999999999999999999976542
Q ss_pred ----cc--ccceEEEeeeecCCCCCCCCceEEEec----CCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHH
Q 021261 80 ----AF--VGRSAIRGYSDFKGSHGFEPNFLQFFG----KGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFV 149 (315)
Q Consensus 80 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (315)
.+ ....++.+.+........+....++++ ++++++++|..++...+.+.+...... ....+.+.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~---~~~~~~~~~~l 250 (453)
T 3atr_A 174 ITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGY---PSIHEYYKKYL 250 (453)
T ss_dssp GGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCC---CCHHHHHHHHH
T ss_pred cccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCC---CCHHHHHHHHH
Confidence 12 224556665555433322232334443 467888999999877666655433211 11223343333
Q ss_pred HHHhcCCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHH
Q 021261 150 LGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINE 229 (315)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~ 229 (315)
.+....+... +........+ +.....++|+.+|++|||||||+++|++|||+++||+||..|+++|.+
T Consensus 251 ~~~~~~~~~~--------~~~~~~~~~~----p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~ 318 (453)
T 3atr_A 251 DKYAPDVDKS--------KLLVKGGALV----PTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILS 318 (453)
T ss_dssp HHHCTTEEEE--------EEEEEEEEEE----ECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhcCCC--------eEEeccceec----cCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 3222111110 0000001111 112234578899999999999999999999999999999999999998
Q ss_pred HHhccCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc
Q 021261 230 ALKTKQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ 279 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 279 (315)
++... +..+++|+.|+++|++++...+..+..+..++.
T Consensus 319 ~l~~~------------~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 319 AFETG------------DFSASGLWDMNICYVNEYGAKQASLDIFRRFLQ 356 (453)
T ss_dssp HHHHT------------CCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHcC------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77641 123578999999999999999999888888765
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.95 E-value=2.6e-26 Score=207.26 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=160.3
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEe-cCC--CEEeecEEEecCCCchhhhhhhCCCCC
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHL-ADG--TILKTKVLIGCDGVNSIVAKWLGFKNP 79 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~-~~g--~~~~ad~vVgADG~~S~vr~~l~~~~~ 79 (315)
...+.++|..|++.|.+++ .+++++++++|+++..+++.+. +.. .++ .+++||+||||||.+|.||+.++....
T Consensus 94 ~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~ 173 (397)
T 3oz2_A 94 EVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSV 173 (397)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGG
T ss_pred ceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcc
Confidence 4457899999999999987 4599999999999998887744 332 233 379999999999999999999987643
Q ss_pred ccc-cceEEEeeeecCCCCCCCCceEEEe---cCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcC
Q 021261 80 AFV-GRSAIRGYSDFKGSHGFEPNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHD 155 (315)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
... .................+....+++ .++++.+++|..++.....+....+.. .......+.+.+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~-----~~~~~~~~~l~~~~~~ 248 (397)
T 3oz2_A 174 ILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI-----HNRFELKNYLDRFIEN 248 (397)
T ss_dssp CCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS-----CSHHHHHHHHHHHHHT
T ss_pred cccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchh-----hhhhhHHHHHHHHHHh
Confidence 322 2222111111211112223333333 356788899998887555444433321 1122333333333322
Q ss_pred CChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccC
Q 021261 156 LPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQ 235 (315)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~ 235 (315)
.+.+ ............+. ......+|..+|++|+|||||.++|++|||+++||+||..||+.|.+++..
T Consensus 249 -~~~l----~~~~~~~~~~~~~~----~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~-- 317 (397)
T 3oz2_A 249 -HPGL----KKGQDIQLVTGGVS----VSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES-- 317 (397)
T ss_dssp -CHHH----HTSEEEEEEEEEEE----CCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred -Cccc----cccceeeeeecccc----ccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHc--
Confidence 2221 11111111122222 122223577899999999999999999999999999999999999998876
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 021261 236 GVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQ 278 (315)
Q Consensus 236 ~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~ 278 (315)
.+..+++|+.|++.++++..............+
T Consensus 318 ----------~~~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 318 ----------NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp ----------TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234578999999999988877666555544444
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.95 E-value=1.2e-25 Score=203.35 Aligned_cols=246 Identities=14% Similarity=0.097 Sum_probs=170.1
Q ss_pred cceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEec---CCCEEeecEEEecCCCchhhhhhhCCCC-C
Q 021261 7 EMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLA---DGTILKTKVLIGCDGVNSIVAKWLGFKN-P 79 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~---~g~~~~ad~vVgADG~~S~vr~~l~~~~-~ 79 (315)
..+.++|..|.+.|.+++ .+++|+++++|++++.++++++ |.+. ++.+++||+||+|||.+|.+|+.+|... .
T Consensus 95 ~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~ 174 (397)
T 3cgv_A 95 VGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVI 174 (397)
T ss_dssp CEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTC
T ss_pred eeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccC
Confidence 467899999999999877 4699999999999999888776 7773 4568999999999999999999998775 3
Q ss_pred ccccc--eEEEeeeecCCCCCCCCceEEEe---cCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhc
Q 021261 80 AFVGR--SAIRGYSDFKGSHGFEPNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLH 154 (315)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (315)
..... .++...+..... .+....+++ .++++.+++|..++...+.+....... .......+.+.+.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~-----~~~~~~~~~l~~~~~ 247 (397)
T 3cgv_A 175 LARNDIISALQYRMINVDV--DPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI-----HNRFELKNYLDRFIE 247 (397)
T ss_dssp CCGGGEEEEEEEEEESCCC--CTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC-----SCHHHHHHHHHHHHH
T ss_pred CChhheeEEEEEEeccCCC--CCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc-----cCCCCHHHHHHHHHH
Confidence 22122 222222222211 133344444 467888899999988666665543321 112233333333332
Q ss_pred CCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhcc
Q 021261 155 DLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTK 234 (315)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~ 234 (315)
.. +.+ ...+........+ |.....++|..+|+++||||||.++|++|||+++|++||..|++.|.+++..
T Consensus 248 ~~-~~~----~~~~~~~~~~~~~----p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~- 317 (397)
T 3cgv_A 248 NH-PGL----KKGQDIQLVTGGV----SVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES- 317 (397)
T ss_dssp TC-HHH----HTSEEEEEEEEEE----ECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred hC-cCC----CCCeEEeeeeeee----ecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Confidence 22 211 1111111111111 1112234678899999999999999999999999999999999999988754
Q ss_pred CCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhcc
Q 021261 235 QGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQS 280 (315)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 280 (315)
.+..+.+|+.|+++|++++...+..+..+..++..
T Consensus 318 -----------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 318 -----------NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp -----------TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12456889999999999999999999888887654
No 20
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.94 E-value=7e-28 Score=217.23 Aligned_cols=249 Identities=14% Similarity=0.100 Sum_probs=161.3
Q ss_pred ccceeeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhh----CCCCC
Q 021261 6 HEMRCVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWL----GFKNP 79 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l----~~~~~ 79 (315)
..+..++|..|.+.|.+++. +++|+++++|++++.. .+++||+||+|||.+|. |+.+ +....
T Consensus 90 ~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~ 157 (381)
T 3c4a_A 90 VLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TAHFTEALVPQVD 157 (381)
T ss_dssp SCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCE
T ss_pred CceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HHhhhhhcCCCcc
Confidence 34578999999999999873 5899999999888642 13689999999999999 9987 33333
Q ss_pred ccccceEEEeeeecCCCCCCCCceEEEecCCeE-EEEEecCCCeEEEEEEeeCCCC--CcccccChHHHHHHHHHHhcCC
Q 021261 80 AFVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLR-SGFIPCDDQTIYWFFTWTSSSQ--DKELEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
.+.+...+.+..... ... .....+.+.+.. +.++|++++...|.+....+.. ......+.++..+.+.+.+.++
T Consensus 158 ~~~~~~~~~~~~~~~--~~~-~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 234 (381)
T 3c4a_A 158 YGRNKYIWYGTSQLF--DQM-NLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAE 234 (381)
T ss_dssp EEEEEEEEEEESSCC--SSE-EEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHH
T ss_pred cCCccEEEEecCCCC--Ccc-eeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhccc
Confidence 233445555543221 111 111112233332 3469998877544433311100 0012235566777777776644
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
.+.. .++... . ..+++....+ .++|..+||+|||||||+++|+.|||+|+||+||..|+++|... .
T Consensus 235 ~~~~-~l~~~~---~-~~~~~~~~~~----~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~--~--- 300 (381)
T 3c4a_A 235 LGGH-GLVSQP---G-LGWRNFMTLS----HDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE--D--- 300 (381)
T ss_dssp HTTC-CCBCCT---T-TCSEEEEECC----CSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS--S---
T ss_pred CCCc-hhhcCC---C-cceeeecccc----CCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc--c---
Confidence 3221 111111 1 0122222222 34788999999999999999999999999999999999999872 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhccCc-----hHHHHHHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQSDG-----KILNFLRDKILA 294 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~-----~~~~~~r~~~l~ 294 (315)
+.+.+|+.|+++|++++...+..++.+..++...+ +...+.|+..++
T Consensus 301 -----------~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 352 (381)
T 3c4a_A 301 -----------GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDAR 352 (381)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGT
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhc
Confidence 46889999999999999999999999886554321 334555665554
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.94 E-value=4.1e-25 Score=208.73 Aligned_cols=262 Identities=15% Similarity=0.084 Sum_probs=179.1
Q ss_pred cceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEee-CCeeEEEec-CC--CEEeecEEEecCCCchhhhhhhCCCCCc
Q 021261 7 EMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES-GHFKLLHLA-DG--TILKTKVLIGCDGVNSIVAKWLGFKNPA 80 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~-~~~~~v~~~-~g--~~~~ad~vVgADG~~S~vr~~l~~~~~~ 80 (315)
..+.++|..|.+.|.+.+ .+++++++++|++++.+ ++.+.|.+. +| .+++||+||+|||.+|.+|+.++.....
T Consensus 121 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~ 200 (591)
T 3i3l_A 121 HAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYD 200 (591)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEE
T ss_pred eeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCC
Confidence 457899999999999877 56999999999999976 455778887 66 5899999999999999999999776332
Q ss_pred c-ccceEEEeeeecCCC--CCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCCC
Q 021261 81 F-VGRSAIRGYSDFKGS--HGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLP 157 (315)
Q Consensus 81 ~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (315)
. ....++++.+..... .+..........++++++++|..++...+.+....+........+.+++.+ .+....
T Consensus 201 ~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~----~l~~~~ 276 (591)
T 3i3l_A 201 EFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYS----STLAKC 276 (591)
T ss_dssp EEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHH----HHHTTC
T ss_pred ccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHH----HHHHhC
Confidence 2 233444444433221 222233334455677888999998876555544322111001122333333 333455
Q ss_pred hHHHHHHHcCCC-cceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 158 AQVKAVIEKTPL-DSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 158 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
+.+...+..... ...... .......++|..+|++|||||||.++|+.|||+++|++||..|+++|...+..
T Consensus 277 p~l~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~--- 348 (591)
T 3i3l_A 277 AKAMDILGGAEQVDEVRIV-----QDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRH--- 348 (591)
T ss_dssp HHHHHHHTTCEECSCCEEE-----EEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHhcCccccCceEe-----cccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 556666554221 111111 11122345678999999999999999999999999999999999999998775
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhh--hhhcc-CchHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVG--SIQQS-DGKILNFLR 289 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~--~~~~~-~~~~~~~~r 289 (315)
.+..+.+++.|++.++.+...+.++...+. ..... ..+++...|
T Consensus 349 ---------~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~FW~~~r 395 (591)
T 3i3l_A 349 ---------GDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFWRKRR 395 (591)
T ss_dssp ---------GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHS
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHhhh
Confidence 345678999999999999999999998888 44443 334444333
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.92 E-value=5.1e-24 Score=201.55 Aligned_cols=253 Identities=12% Similarity=-0.007 Sum_probs=162.8
Q ss_pred cceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe-eE-EEec------CC---------CEEeecEEEecCCCc
Q 021261 7 EMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KL-LHLA------DG---------TILKTKVLIGCDGVN 67 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-~~-v~~~------~g---------~~~~ad~vVgADG~~ 67 (315)
..+.++|..|.++|.+++ .+++|+++++|+++..++++ +. |.+. +| .+++||+||+|||.+
T Consensus 137 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 137 GNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp TCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred CCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 367899999999999977 35999999999999987654 43 6665 33 689999999999999
Q ss_pred hhhhhhh----CCCCCccccc--eEEEeeeecCCCCCCCCceEEEec------CCeEEEEEecC--CCeEEEEEEeeCCC
Q 021261 68 SIVAKWL----GFKNPAFVGR--SAIRGYSDFKGSHGFEPNFLQFFG------KGLRSGFIPCD--DQTIYWFFTWTSSS 133 (315)
Q Consensus 68 S~vr~~l----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~p~~--~~~~~~~~~~~~~~ 133 (315)
|.+|+.+ ++........ .++...+..+.....+....++++ .....+++|.. ++.+.+.+....+.
T Consensus 217 S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~ 296 (584)
T 2gmh_A 217 GHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDY 296 (584)
T ss_dssp CHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTC
T ss_pred chHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCc
Confidence 9999887 5542211111 123333333322211222333332 12334577887 67766665554332
Q ss_pred CCcccccChHHHHHHHHHHhcCCChHHHHHHHcCCCcceeeccccccCccc-ccccCcCCCcEEEeccCCCCCCCCCccc
Q 021261 134 QDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDSIISSRLQYRQPQE-VLWGNISRGSVCVAGDALHPMTPDIGQG 212 (315)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~LiGDAAh~~~P~~G~G 212 (315)
... ..++ .+.+.+.. . .+.+...+...+ ...+..+...+.. ...++|..+|++|||||||.++|+.|||
T Consensus 297 ~~~--~~~~---~~~l~~~~-~-~p~i~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG 366 (584)
T 2gmh_A 297 QNP--YLSP---FREFQRWK-H-HPSIKPTLEGGK---RIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKG 366 (584)
T ss_dssp CCT--TCCH---HHHHHHHT-T-STTTHHHHTTCE---EEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBC
T ss_pred ccc--cCCh---HHHHHHHH-h-ChHHHHHhCCCe---EEEecceEccCCCcccCCccccCCEEEEcccccccCcccccc
Confidence 111 1112 23333322 2 345566665432 1111111111111 1235788999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhccCCCCCCchhhhhH-HHHHH---HHHHHHhhhhh-HHHHHHHHHHhhhhhccC
Q 021261 213 GCAALEDGIVLARCINEALKTKQGVGEEDEEEFNK-RVEMG---LKRYAKERRWR-CFELISIAYLVGSIQQSD 281 (315)
Q Consensus 213 ~~~al~da~~La~~l~~~~~~~~~~~~~~~~~s~~-~~~~~---l~~Y~~~r~~~-~~~~~~~s~~~~~~~~~~ 281 (315)
+++||+||..||+.|..++... + ..+++ |+.|+++|+++ +...+..++.+..++..-
T Consensus 367 ~~~Ai~da~~LA~~L~~~~~~g------------~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~~ 428 (584)
T 2gmh_A 367 THTAMKSGTLAAESIFNQLTSE------------NLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGI 428 (584)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCC------------CCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGST
T ss_pred HHHHHHHHHHHHHHHHHHHHcC------------CcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHHh
Confidence 9999999999999999987641 0 12343 89999999998 788888888888887543
No 23
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.91 E-value=3.3e-23 Score=188.89 Aligned_cols=241 Identities=14% Similarity=0.092 Sum_probs=157.4
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee--EEEecCCC--EEeecEEEecCCCchhhhhhhCCCCC
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK--LLHLADGT--ILKTKVLIGCDGVNSIVAKWLGFKNP 79 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~--~v~~~~g~--~~~ad~vVgADG~~S~vr~~l~~~~~ 79 (315)
...+.++|..|.+.|.+.+ .+++|+++++|++++.+++++ .|...+|+ +++||+||+|||.+|.+|+.++...+
T Consensus 98 ~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~ 177 (421)
T 3nix_A 98 NWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKP 177 (421)
T ss_dssp CCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEEC
T ss_pred CceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCC
Confidence 4467899999999999977 369999999999999987774 45557787 79999999999999999999987643
Q ss_pred c-cccceEEEeeeecCCCC-CC-CCceEEEe---cCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHh
Q 021261 80 A-FVGRSAIRGYSDFKGSH-GF-EPNFLQFF---GKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKL 153 (315)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (315)
. .....++...+...... .+ .....+++ ..+++++++|.+++...+.+....+.. .....+.++..+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~-~~~~~~~~~~l~~~~~-- 254 (421)
T 3nix_A 178 SGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYF-DEYTGTPEERMRAMIA-- 254 (421)
T ss_dssp CSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHH-TTSCSCHHHHHHHHHH--
T ss_pred CcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHh-hhcCCCHHHHHHHHHH--
Confidence 3 23444444444332211 11 11122222 356788899999988666555432211 1112244444444443
Q ss_pred cCCChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 154 HDLPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
..+.+...+...... .++...........+|..++++|||||||.++|+.|+|+++|++||..|++.|.+.+.+
T Consensus 255 --~~p~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~ 328 (421)
T 3nix_A 255 --NEGHIAERFKSEEFL----FEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKG 328 (421)
T ss_dssp --TCTTTHHHHTTCCBS----SCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --hCcHHHHHHhcCccc----cCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcC
Confidence 233344455543321 11111111222244678899999999999999999999999999999999999998775
Q ss_pred cCCCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHH
Q 021261 234 KQGVGEEDEEEFNKRVEMGLKRYAKERRWRCFELIS 269 (315)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~ 269 (315)
. ....++.|++.++.......+
T Consensus 329 ~--------------~~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 329 E--------------EVNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp C--------------CCCHHHHTHHHHHHHHHHHHH
T ss_pred C--------------chhHHHHHHHHHHHHHHHHHH
Confidence 2 112456677766655444333
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.90 E-value=9.7e-23 Score=191.00 Aligned_cols=248 Identities=12% Similarity=-0.001 Sum_probs=165.3
Q ss_pred cceeeeHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCe--eEEEecCCCEEeecEEEecCCCchhh-hhhhCCCCCc
Q 021261 7 EMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIV-AKWLGFKNPA 80 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~--~~v~~~~g~~~~ad~vVgADG~~S~v-r~~l~~~~~~ 80 (315)
..+.++|..|.+.|.+.+ .+++++++ +|++++.++++ +.|.+.+|.+++||+||+|||.+|.+ |+.+|.....
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~ 246 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLS 246 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEE
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCccc
Confidence 357899999999999876 46899999 69999887554 46778888889999999999999999 6777765422
Q ss_pred cc----cceEEEeeeecCCC-CCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcC
Q 021261 81 FV----GRSAIRGYSDFKGS-HGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHD 155 (315)
Q Consensus 81 ~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
+. ...++...+..... ....+.........++++.+|..++.. ..+.+.... .+.++..+.+.+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~-~~~v~~~~~------~~~~~~~~~l~~~l~~ 319 (526)
T 2pyx_A 247 QKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKG-VGYVYSSSH------TNDIDAQKTLFNYLGV 319 (526)
T ss_dssp CHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEE-EEEEECTTT------CCHHHHHHHHHHHHTC
T ss_pred ccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceE-EEEEecCCC------CChHHHHHHHHHHHHh
Confidence 21 12233333333321 111222223344566777899987532 333332211 1245566777777766
Q ss_pred CChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccC
Q 021261 156 LPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQ 235 (315)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~ 235 (315)
+.+. +...+. ..+++... ..++|..+||+|||||||.++|+.|||+++|++||..|+++|.. .
T Consensus 320 ~~~~----l~~~~~---~~~~~~~~-----~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~---~-- 382 (526)
T 2pyx_A 320 DGAA----ADKLEP---RQLAINPG-----YRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP---N-- 382 (526)
T ss_dssp CHHH----HHHCCC---EEEECCCE-----EESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS---C--
T ss_pred cCcc----cccCCc---eEEecccC-----ccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh---c--
Confidence 5332 222221 12222211 13456789999999999999999999999999999999988753 1
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc-cCchHHHHHH
Q 021261 236 GVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ-SDGKILNFLR 289 (315)
Q Consensus 236 ~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~-~~~~~~~~~r 289 (315)
....+.+++.|+++|++++..+.++......... ...+++...+
T Consensus 383 ----------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 427 (526)
T 2pyx_A 383 ----------RMVMDTISARVNERYQQHWQQIIDFLKLHYVISQRQEDRYWRDHR 427 (526)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHHHTT
T ss_pred ----------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHh
Confidence 1256789999999999999999887766665533 3445555544
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.90 E-value=1.6e-22 Score=188.95 Aligned_cols=245 Identities=8% Similarity=-0.055 Sum_probs=163.3
Q ss_pred ccceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe--eEEEecCCCEEeecEEEecCCCchhhh-hhhCCCCCc
Q 021261 6 HEMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIVA-KWLGFKNPA 80 (315)
Q Consensus 6 ~~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~--~~v~~~~g~~~~ad~vVgADG~~S~vr-~~l~~~~~~ 80 (315)
...+.++|..|.+.|.+++ .+++++++ +|++++.++++ +.|.+.+|++++||+||+|||.+|.++ +.+|.....
T Consensus 165 ~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~ 243 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQS 243 (511)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred CeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcc
Confidence 3457899999999999976 46999999 99999986655 678888888999999999999999995 456765321
Q ss_pred ----cccceEEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCC
Q 021261 81 ----FVGRSAIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
.....++...+....+....+.......++++++++|..+ ...+.+.+... ..+.++..+.+.+.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~------~~~~~~~~~~l~~~~~~- 315 (511)
T 2weu_A 244 FSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE------FISPEEAERELRSTVAP- 315 (511)
T ss_dssp CTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT------TSCHHHHHHHHHHHHCT-
T ss_pred ccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC------CCCHHHHHHHHHHHhCc-
Confidence 1112222222333222112222233445567788999987 33334444221 12345666667666632
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
.+.+ .+ ....++.. ...+++..+|++|||||||.++|+.|+|+++|++||..|+++|.. +
T Consensus 316 ~~~~------~~---~~~~~~~~-----~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~---~--- 375 (511)
T 2weu_A 316 GRDD------LE---ANHIQMRI-----GRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG---E--- 375 (511)
T ss_dssp TCTT------SC---CEEEECCC-----EEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---T---
T ss_pred cccc------cc---ceeEEeec-----cccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---C---
Confidence 2211 11 11111111 112356679999999999999999999999999999999998863 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc-cCchHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ-SDGKILNFLR 289 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~-~~~~~~~~~r 289 (315)
+..+.+|+.|+++|++++..+.++......... ...+++...+
T Consensus 376 ----------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 419 (511)
T 2weu_A 376 ----------RWDPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWKAAK 419 (511)
T ss_dssp ----------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHhcc
Confidence 134678999999999999999988777666543 3445555544
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.88 E-value=6e-22 Score=186.15 Aligned_cols=243 Identities=12% Similarity=-0.015 Sum_probs=160.6
Q ss_pred cceeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe--eEEEecCCCEEeecEEEecCCCchhhhh-hhCCCCCcc
Q 021261 7 EMRCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIVAK-WLGFKNPAF 81 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~--~~v~~~~g~~~~ad~vVgADG~~S~vr~-~l~~~~~~~ 81 (315)
..+.++|..|.+.|.+.+ .+++++.+ +|++++.++++ +.|.+.+|++++||+||+|||.+|.+|+ .+|.....+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~ 236 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDM 236 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccc
Confidence 357899999999999977 46999999 89999886554 5788888889999999999999999954 556653222
Q ss_pred c----cceEEEeeeecCCCC-CCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCC
Q 021261 82 V----GRSAIRGYSDFKGSH-GFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDL 156 (315)
Q Consensus 82 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (315)
. ...++...+....+. ............+++++++|..++. .+.+.+... ..+.++..+.+.+.+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~-~~g~v~~~~------~~~~~~~~~~l~~~~~~~ 309 (538)
T 2aqj_A 237 SDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRF-GSGYVFSSH------FTSRDQATADFLKLWGLS 309 (538)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEE-EEEEEECTT------TSCHHHHHHHHHHHHTCC
T ss_pred ccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCce-EEEEEEcCC------CCChHHHHHHHHHHhcCC
Confidence 1 122222222221110 0112222334566778899998753 333333211 123456667777776542
Q ss_pred ChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccCC
Q 021261 157 PAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQG 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~ 236 (315)
+ + .+ ....++.. ...++|..+||+|||||||.++|+.|||+++|++||..|+++|.. +
T Consensus 310 -~-~------~~---~~~~~~~~-----~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~--- 367 (538)
T 2aqj_A 310 -D-N------QP---LNQIKFRV-----GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---T--- 367 (538)
T ss_dssp -T-T------CC---CEEEECCC-----EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---T---
T ss_pred -C-C------CC---ceEEeecc-----ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---c---
Confidence 1 1 11 11122211 113456789999999999999999999999999999999987752 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc-cCchHHHHHH
Q 021261 237 VGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ-SDGKILNFLR 289 (315)
Q Consensus 237 ~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~-~~~~~~~~~r 289 (315)
+..+.+|+.|+++|+++++.+.++......... ...+++...+
T Consensus 368 ----------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 411 (538)
T 2aqj_A 368 ----------SFDPRLSDAFNAEIVHMFDDCRDFVQAHYFTTSRDDTPFWLANR 411 (538)
T ss_dssp ----------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHHHHH
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHhh
Confidence 235678999999999999888886666554432 3445554444
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.88 E-value=6.8e-22 Score=186.14 Aligned_cols=244 Identities=12% Similarity=0.042 Sum_probs=162.0
Q ss_pred cceeeeHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCe--eEEEecCCCEEeecEEEecCCCchhh-hhhhCCCCCc
Q 021261 7 EMRCVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHF--KLLHLADGTILKTKVLIGCDGVNSIV-AKWLGFKNPA 80 (315)
Q Consensus 7 ~~~~i~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~--~~v~~~~g~~~~ad~vVgADG~~S~v-r~~l~~~~~~ 80 (315)
..+.++|..|.+.|.+.+ ++++++++ +|++++.++++ +.|.+.+|++++||+||+|||.+|.+ ++.++.....
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~ 265 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLD 265 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCccc
Confidence 357799999999999977 38999999 99999886554 67888889899999999999999999 5677765322
Q ss_pred ccc----ceEEEeeeecCCCC-CCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcC
Q 021261 81 FVG----RSAIRGYSDFKGSH-GFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHD 155 (315)
Q Consensus 81 ~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (315)
+.+ ...+...+....+. ...+........+++++++|..+. ....+.+... ..+.++..+.+.+.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~------~~~~~~~~~~l~~~~~~ 338 (550)
T 2e4g_A 266 MSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR------FATEDEAVREFCEMWHL 338 (550)
T ss_dssp CTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHHHHHHTTC
T ss_pred ccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC------CCChHHHHHHHHHhhCc
Confidence 211 11222222222110 012222233345677778998773 3333343211 12345666677766643
Q ss_pred CChHHHHHHHcCCCcceeeccccccCcccccccCcCCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhccC
Q 021261 156 LPAQVKAVIEKTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKTKQ 235 (315)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~~~ 235 (315)
.+ .+ .. ....++.. ...+++..+|++|||||||.++|+.|||+++|++||..|+++|.. .
T Consensus 339 ~p-~l------~~---~~~i~~~~-----~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~---~-- 398 (550)
T 2e4g_A 339 DP-ET------QP---LNRIRFRV-----GRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD---K-- 398 (550)
T ss_dssp CT-TT------SC---CEEEECCC-----EEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC---T--
T ss_pred Cc-cc------CC---CceEEecC-----CCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc---c--
Confidence 21 11 11 11111111 112345679999999999999999999999999999999988753 1
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhc-cCchHHHHHH
Q 021261 236 GVGEEDEEEFNKRVEMGLKRYAKERRWRCFELISIAYLVGSIQQ-SDGKILNFLR 289 (315)
Q Consensus 236 ~~~~~~~~~s~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~-~~~~~~~~~r 289 (315)
...+.+|+.|+++|++++..+.++......+.. ...++++..+
T Consensus 399 -----------~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r~~~~fw~~~~ 442 (550)
T 2e4g_A 399 -----------SLNPVLTARFNREIETMFDDTRDFIQAHFYFSPRTDTPFWRANK 442 (550)
T ss_dssp -----------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHHHHT
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHhh
Confidence 245678999999999999999998877777543 3445555554
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.82 E-value=4.4e-19 Score=162.13 Aligned_cols=237 Identities=17% Similarity=0.134 Sum_probs=141.8
Q ss_pred ceeeeHHHHHHHHHhhC--CCCcEEecc-eEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCCC-CCcc--
Q 021261 8 MRCVRRKLLLETLAKEL--PSGTIRYSS-QVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFK-NPAF-- 81 (315)
Q Consensus 8 ~~~i~R~~L~~~L~~~~--~~~~i~~~~-~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~-~~~~-- 81 (315)
...++|..+...|.+++ .++++++.. ++.+++. ...++|+||+|||.+|.+|...... ...+
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~~------------~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~ 183 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLEG------------LSEQYDLLVVCTGKYALGKVFEKQSENSPFEK 183 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHHH------------HHTTSSEEEECCCCTTGGGGSCBCGGGCCCSS
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhhh------------hcccCCEEEECCCCcchHHhccCCCCCCcccC
Confidence 46789999999999876 346666521 0111100 1236899999999999987544211 1111
Q ss_pred ccceEEEeeeec-CCCCCCCCceEEEecCCeEEEEEec--CCCeEEEEEEeeCCCCC-ccc-c----cChHHHHHHHHHH
Q 021261 82 VGRSAIRGYSDF-KGSHGFEPNFLQFFGKGLRSGFIPC--DDQTIYWFFTWTSSSQD-KEL-E----DHSAELKQFVLGK 152 (315)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~-~~~-~----~~~~~~~~~~~~~ 152 (315)
.......+++.. ..+......+..+ ...+.+.++|. .++...+.+.+..+... ... . .+++++.+.+++.
T Consensus 184 p~r~~~~~~~~g~~~~~~~~~~~~~~-~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (430)
T 3ihm_A 184 PQRALCVGLFKGIKEAPIRAVTMSFS-PGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEK 262 (430)
T ss_dssp CSSEEEEEEEESBCCCSSCCEEEEEE-TTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHH
T ss_pred CCeeEEEEEEccCCCCCcCeeeeeec-CCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHH
Confidence 112222222211 1111111223333 33345557775 33444444555443322 111 1 3678888888888
Q ss_pred hcCCChHHHHHHHcCC------CcceeeccccccCcccccccCcCCCcEEE-eccCCCCCCCCCccchhhhhhHHHHHHH
Q 021261 153 LHDLPAQVKAVIEKTP------LDSIISSRLQYRQPQEVLWGNISRGSVCV-AGDALHPMTPDIGQGGCAALEDGIVLAR 225 (315)
Q Consensus 153 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~L-iGDAAh~~~P~~G~G~~~al~da~~La~ 225 (315)
+.++.+.+...+.... ...+....+ .+.......+|..|+++| +|||||.++|+.|||+|+||+||..|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~ 340 (430)
T 3ihm_A 263 LGKHHPSVAERIDPAEFDLANSSLDILQGGV--VPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGE 340 (430)
T ss_dssp HHHHCHHHHTTBCTTTCEESSSTTSEEEECC--CCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHhCccHHHHHhhchhccccCccceeecce--eecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHH
Confidence 8888887776665543 111111111 111111234788999999 9999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCchhhhhHHHHHHHHHHHHhhh-hhHHHHHHHHHHhh
Q 021261 226 CINEALKTKQGVGEEDEEEFNKRVEMGLKRYAKERR-WRCFELISIAYLVG 275 (315)
Q Consensus 226 ~l~~~~~~~~~~~~~~~~~s~~~~~~~l~~Y~~~r~-~~~~~~~~~s~~~~ 275 (315)
+|... . +.+++|..|+.+|+ .+++...+.+..+.
T Consensus 341 ~l~~~--~--------------~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 375 (430)
T 3ihm_A 341 EILAH--S--------------VYDLRFSEHLERRRQDRVLCATRWTNFTL 375 (430)
T ss_dssp HHHHC--S--------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhc--C--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99873 1 36789999999998 66666666665543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.57 E-value=2.4e-15 Score=139.69 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=56.7
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEee---CCeeEEEe--c-CC--CEEeecEEEecCCCchhhhhhhCCC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEES---GHFKLLHL--A-DG--TILKTKVLIGCDGVNSIVAKWLGFK 77 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~---~~~~~v~~--~-~g--~~~~ad~vVgADG~~S~vr~~l~~~ 77 (315)
..+++..|.+.|.+.+ .+++|+++++|++++.+ ++.+.|.+ . +| .+++||+||+|||.+|.+|+..++.
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~ 239 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIRE 239 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccchh
Confidence 4588899999998876 46999999999999875 34577777 3 55 4799999999999999999877654
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.35 E-value=3.7e-11 Score=105.63 Aligned_cols=194 Identities=15% Similarity=0.095 Sum_probs=111.1
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEe-ecEEEecCCCchhhhhhhCC-------CCCccccceEEEeeeecCCCC
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILK-TKVLIGCDGVNSIVAKWLGF-------KNPAFVGRSAIRGYSDFKGSH 97 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~-ad~vVgADG~~S~vr~~l~~-------~~~~~~~~~~~~~~~~~~~~~ 97 (315)
+++|+++++|++++.++++++|++.+|+.+. ||+||+|||.+|.+|..... ....|. ..+...+.++.+.
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~ 196 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD--PTWAVALAFETPL 196 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE--EEEEEEEEESSCC
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc--ceeEEEEEecCCC
Confidence 6899999999999999889999999998664 99999999999999865322 122222 3333334444443
Q ss_pred CCCCceEEEecCCeEEEEE-----ecCCCe-EEEEEEeeCCCCCcccccChHHHHHHHHHHhcCCChHHHHHHHcCCCcc
Q 021261 98 GFEPNFLQFFGKGLRSGFI-----PCDDQT-IYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIEKTPLDS 171 (315)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~-----p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
..+. ...+...+...+++ |...+. ..|++.............+.+++.+.+.+.+...-.. ....+..
T Consensus 197 ~~~~-~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~-----~~~~p~~ 270 (336)
T 1yvv_A 197 QTPM-QGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC-----TMPAPVF 270 (336)
T ss_dssp SCCC-CEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS-----CCCCCSE
T ss_pred CCCC-CeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCC-----CCCCCcE
Confidence 2222 22333443333332 443332 2233333211111223456777778887776643221 0000111
Q ss_pred eeeccccccCccc-ccccC-c-CCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 172 IISSRLQYRQPQE-VLWGN-I-SRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~~-~-~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
..........+.. ..... | ..+|++|+|||+|. .|++.|+.|+..||+.|.+.+..
T Consensus 271 ~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 271 SLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp EEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 1111111111110 00001 1 34899999999974 49999999999999999887664
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.61 E-value=2.5e-07 Score=82.45 Aligned_cols=195 Identities=12% Similarity=0.035 Sum_probs=111.3
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh-hhhhhCCCCCccccce
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLGFKNPAFVGRS 85 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~-vr~~l~~~~~~~~~~~ 85 (315)
..++...|.+.|.+.+ .+++++.+++|++++.+++++.|...+| +++||.||.|+|.+|. +.+.++...+.. ...
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~-~~~ 236 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFL-PVK 236 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCE-EEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCcee-ccc
Confidence 3467788888888876 3599999999999998877787877777 8999999999999987 777776543322 111
Q ss_pred EEEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEEeeCCCCCcccccChHHHHHHHHHHhcCCChHHHHHHH
Q 021261 86 AIRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFTWTSSSQDKELEDHSAELKQFVLGKLHDLPAQVKAVIE 165 (315)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (315)
.....+..+.. .... .++.. ..+++|..++.+.+.. ...........+. +..+.+.+.+..+.|.+.
T Consensus 237 g~~~~~~~~~~-~~~~---~~~~~--~~~~~p~~~g~~~vG~--~~~~~~~~~~~~~-~~~~~l~~~~~~~~p~l~---- 303 (382)
T 1ryi_A 237 GECLSVWNDDI-PLTK---TLYHD--HCYIVPRKSGRLVVGA--TMKPGDWSETPDL-GGLESVMKKAKTMLPAIQ---- 303 (382)
T ss_dssp EEEEEEECCSS-CCCS---EEEET--TEEEEECTTSEEEEEC--CCEETCCCCSCCH-HHHHHHHHHHHHHCGGGG----
T ss_pred eEEEEECCCCC-Cccc---eEEcC--CEEEEEcCCCeEEEee--cccccCCCCCCCH-HHHHHHHHHHHHhCCCcC----
Confidence 11112222211 1111 22333 3457787777543332 2111111112222 223344433332222211
Q ss_pred cCCCcceeeccccccCcccccccCcCCCcEEEeccCC-----CCCCCCCccchhhhhhHHHHHHHHHHH
Q 021261 166 KTPLDSIISSRLQYRQPQEVLWGNISRGSVCVAGDAL-----HPMTPDIGQGGCAALEDGIVLARCINE 229 (315)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~LiGDAA-----h~~~P~~G~G~~~al~da~~La~~l~~ 229 (315)
..+ + ...... ...+..++..+||++. ....+++|.|+.+|...|..+++.|..
T Consensus 304 ~~~---~-~~~w~g-------~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 304 NMK---V-DRFWAG-------LRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp GSE---E-EEEEEE-------EEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCc---e-eeEEEE-------ecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 110 0 000000 1123456777888763 346778999999999999888888754
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.58 E-value=1.5e-06 Score=77.94 Aligned_cols=112 Identities=10% Similarity=0.036 Sum_probs=69.8
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe-eEEEecCCCEEeecEEEecCCCch-hhhhhhCCCCCccccceE
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNS-IVAKWLGFKNPAFVGRSA 86 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~~~ad~vVgADG~~S-~vr~~l~~~~~~~~~~~~ 86 (315)
++-..+.+.|.+.+ .+++++++++|++++.++++ +.|...+| +++||.||.|+|.+| .+++.+|...+.......
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~~ 249 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPLQ 249 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCcccccee
Confidence 34456777777655 46999999999999987665 56777777 799999999999998 678888776443311111
Q ss_pred EEeeeecCCCCCCCCceEEEecCCeEEEEEecCCCeEEEEEE
Q 021261 87 IRGYSDFKGSHGFEPNFLQFFGKGLRSGFIPCDDQTIYWFFT 128 (315)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 128 (315)
....+.. ...... .+...+...++.|..++.+.+...
T Consensus 250 -~~~~~~~-~~~~~~---~~~~~~~~~y~~p~~~g~~~ig~~ 286 (405)
T 2gag_B 250 -ALVSELF-EPVHPT---VVMSNHIHVYVSQAHKGELVMGAG 286 (405)
T ss_dssp -EEEEEEB-CSCCCS---EEEETTTTEEEEECTTSEEEEEEE
T ss_pred -EEEecCC-ccccCc---eEEeCCCcEEEEEcCCCcEEEEec
Confidence 1111111 111111 223333445577877777655444
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.42 E-value=5.1e-06 Score=73.99 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=54.8
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCch-hhhhhhCCC
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNS-IVAKWLGFK 77 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S-~vr~~l~~~ 77 (315)
.++...+.+.|.+.+ .+++++.+++|++++.+++++. |...+| +++||.||.|+|.+| .+.+.++..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 356777888887765 4699999999999998877776 877777 899999999999998 567777655
No 34
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.39 E-value=4.3e-06 Score=74.25 Aligned_cols=68 Identities=13% Similarity=0.210 Sum_probs=56.7
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch-hhhhhhCCC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS-IVAKWLGFK 77 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S-~vr~~l~~~ 77 (315)
..++...+.+.|.+.+ .+++|+++++|++++.+++++.|...+| +++||.||.|+|.+| .+.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3467778888888776 4699999999999999888888888777 899999999999998 456777764
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.24 E-value=1.9e-05 Score=70.34 Aligned_cols=66 Identities=12% Similarity=0.054 Sum_probs=52.7
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh-hhhhhC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLG 75 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~-vr~~l~ 75 (315)
..++...+.+.|.+.+ .+++++.+++|++++.+++++.|...++ +++||.||.|+|.+|. +.+.++
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 3466778888888876 3599999999999998877787877665 7999999999999875 345555
No 36
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.20 E-value=0.0001 Score=65.88 Aligned_cols=68 Identities=13% Similarity=0.075 Sum_probs=54.2
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc-hhhhhhhCCCC
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN-SIVAKWLGFKN 78 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~-S~vr~~l~~~~ 78 (315)
.++...+.+.|.+.+ .+++|+++++|++++.++++++|...++ +++||.||.|+|.+ +.+++.++...
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~ 219 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARL 219 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCC
Confidence 456667777777765 4699999999999998888888876554 79999999999998 45777777543
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.10 E-value=4e-05 Score=73.61 Aligned_cols=67 Identities=13% Similarity=0.080 Sum_probs=55.4
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh-hhhhhC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI-VAKWLG 75 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~-vr~~l~ 75 (315)
..++...|.+.|.+.+ .+++|+++++|++++.+++++.|...+|.+++||.||.|+|.+|. +.+..+
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTST 481 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTT
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccC
Confidence 3456778888888765 469999999999999998889899888889999999999999986 344333
No 38
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.05 E-value=0.00013 Score=67.58 Aligned_cols=65 Identities=12% Similarity=0.119 Sum_probs=52.3
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEec---CCC--EEeecEEEecCCCchh-hhhh-hC
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTKVLIGCDGVNSI-VAKW-LG 75 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~---~g~--~~~ad~vVgADG~~S~-vr~~-l~ 75 (315)
++...|...|.+.+ .+++++.+++|+++..+++.+.|.+. +|+ +++||.||.|+|.+|. +++. ++
T Consensus 146 v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 146 VDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMH 219 (501)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTC
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhcc
Confidence 67888888888876 46999999999999987766667763 565 7999999999999986 4554 54
No 39
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.04 E-value=0.00014 Score=67.16 Aligned_cols=61 Identities=21% Similarity=0.302 Sum_probs=42.5
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCchhhhhhhC
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSIVAKWLG 75 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S~vr~~l~ 75 (315)
.|-+.|.+.+ .+++|++|++|++|..++++++ |.+++|++++||.||.+-+.....++.++
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 4556666655 3589999999999999988865 89999999999999987776666666663
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.03 E-value=3.4e-05 Score=74.32 Aligned_cols=67 Identities=10% Similarity=-0.005 Sum_probs=53.6
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCC-EEeecEEEecCCCchh-hhhhhCC
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGT-ILKTKVLIGCDGVNSI-VAKWLGF 76 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~-~~~ad~vVgADG~~S~-vr~~l~~ 76 (315)
.++...|.+.|.+.+ .+++|+++++|++++.+++++.|...+|. +++||.||.|+|.+|. +.+.++.
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~l 478 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHL 478 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTS
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCC
Confidence 456677888888765 46999999999999998888889888887 8999999999999975 3333333
No 41
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.99 E-value=0.00023 Score=62.56 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=56.3
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe-eEEEecCC--CEEeecEEEecCCCch-hhhhhh-CCC
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADG--TILKTKVLIGCDGVNS-IVAKWL-GFK 77 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-~~v~~~~g--~~~~ad~vVgADG~~S-~vr~~l-~~~ 77 (315)
.++...|.+.|.+.+ .+++++++++|++++.++++ +.|...+| .+++||.||.|+|.+| .+.+.+ |.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 466778888888766 46999999999999988766 78888888 4899999999999998 556777 765
No 42
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.98 E-value=0.00071 Score=61.60 Aligned_cols=56 Identities=21% Similarity=0.295 Sum_probs=49.1
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.|.+.|.+.++.++|+++++|++++.++++++|++.+|++++||.||.|-......
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 67777887776579999999999999888899999999999999999999988654
No 43
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.87 E-value=0.00015 Score=65.78 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=52.2
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecc---eEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCchh
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSS---QVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~---~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
-.++...+.+.|.+.+ .+++|++++ +|+++..++++++ |...+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3456667888888766 469999999 9999999888877 99999989999999999999984
No 44
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.76 E-value=0.0026 Score=57.67 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=53.5
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEe---------------eCCee-EEEecCCCEE--eecEEEecCCCchh
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEE---------------SGHFK-LLHLADGTIL--KTKVLIGCDGVNSI 69 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~---------------~~~~~-~v~~~~g~~~--~ad~vVgADG~~S~ 69 (315)
.++...+.+.|.+++ .+++++.+++|++++. +++++ .|...+| ++ +||.||.|.|.+|.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 456678888888766 4699999999999987 45554 5777777 68 99999999999986
Q ss_pred -hhhhhCCCCC
Q 021261 70 -VAKWLGFKNP 79 (315)
Q Consensus 70 -vr~~l~~~~~ 79 (315)
+.+.+|...+
T Consensus 256 ~l~~~~g~~~~ 266 (448)
T 3axb_A 256 RLLNPLGIDTF 266 (448)
T ss_dssp HHHGGGTCCCS
T ss_pred HHHHHcCCCCc
Confidence 6677665533
No 45
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.61 E-value=0.00045 Score=60.34 Aligned_cols=52 Identities=12% Similarity=0.099 Sum_probs=43.0
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
.+.+.|.+++ +++|+++++|++++.++++++|++.+|+++++|.||.|-...
T Consensus 113 ~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 113 SIIKHYLKES-GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp HHHHHHHHHH-TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHH
T ss_pred HHHHHHHHhc-CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 3444555544 689999999999999888899999999889999999998754
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.61 E-value=0.00049 Score=60.69 Aligned_cols=59 Identities=20% Similarity=0.241 Sum_probs=48.6
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.++...+.+.|.+.+ .+++++.+++|++++.+++++.|...+| +++||.||.|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 456667778887765 4699999999999998877788877777 4999999999999873
No 47
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.60 E-value=0.00012 Score=57.66 Aligned_cols=65 Identities=18% Similarity=0.280 Sum_probs=54.0
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCCC
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGFK 77 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~ 77 (315)
+....+.+.|.+.+ .+++++++ +|++++.+++++.|.+++| ++++|+||.|+|.+|.+++.+|++
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCC
Confidence 34567777777665 35999999 9999998877788888888 899999999999999888877654
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.54 E-value=0.00077 Score=63.18 Aligned_cols=68 Identities=13% Similarity=-0.055 Sum_probs=54.0
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEecC---C--CEEeecEEEecCCCch-hhhhhhCCC
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLAD---G--TILKTKVLIGCDGVNS-IVAKWLGFK 77 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~~---g--~~~~ad~vVgADG~~S-~vr~~l~~~ 77 (315)
.++...|...|.+.+ .+++|+.+++|+++..+++++ .|.+.+ | .+++||.||.|+|.+| .+++.+|..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 466777888887765 469999999999999988764 466654 4 3799999999999999 668877765
No 49
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.42 E-value=0.00027 Score=63.78 Aligned_cols=67 Identities=16% Similarity=0.217 Sum_probs=55.9
Q ss_pred eeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch-----------hhhhhhCC
Q 021261 10 CVRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS-----------IVAKWLGF 76 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S-----------~vr~~l~~ 76 (315)
...+..+.+.|.+++. +++|+++++|+++..+++++.|...+| +++||.||.|+|.+| .+.+.+|.
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~ 206 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGL 206 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCC
Confidence 3466788888888763 699999999999999888888988888 899999999999999 45666665
Q ss_pred C
Q 021261 77 K 77 (315)
Q Consensus 77 ~ 77 (315)
.
T Consensus 207 ~ 207 (417)
T 3v76_A 207 P 207 (417)
T ss_dssp C
T ss_pred C
Confidence 4
No 50
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.42 E-value=0.00035 Score=63.63 Aligned_cols=65 Identities=25% Similarity=0.255 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhC--CCCcEEecceEEEEEeeCCe-eEEEecCCCEEeecEEEecCCCch-----------hhhhhhCCC
Q 021261 13 RKLLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNS-----------IVAKWLGFK 77 (315)
Q Consensus 13 R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~~~ad~vVgADG~~S-----------~vr~~l~~~ 77 (315)
...+.+.|.+++ .+++|+++++|+++..++++ +.|.+.+|++++||.||.|+|.+| .+++.+|..
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 466777777765 46999999999999987776 778888888899999999999999 788888765
No 51
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.40 E-value=0.00052 Score=61.58 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=51.1
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEE---------EEEeeCCeeEEEecCCCEEeecEEEecCCCch-hhhh-hhC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVV---------SIEESGHFKLLHLADGTILKTKVLIGCDGVNS-IVAK-WLG 75 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~---------~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S-~vr~-~l~ 75 (315)
..++...|.+.|.+.+ .+++++++++|+ ++..+++++.|...+| +++||.||.|+|.+| .+++ .+|
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g 245 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLG 245 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHC
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcC
Confidence 3567788888888876 358999999999 8877766676666655 899999999999999 6777 887
Q ss_pred CCCC
Q 021261 76 FKNP 79 (315)
Q Consensus 76 ~~~~ 79 (315)
...+
T Consensus 246 ~~~~ 249 (405)
T 3c4n_A 246 LHTR 249 (405)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.33 E-value=0.00027 Score=58.32 Aligned_cols=65 Identities=11% Similarity=-0.046 Sum_probs=52.8
Q ss_pred eHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhhhhhhCCC
Q 021261 12 RRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIVAKWLGFK 77 (315)
Q Consensus 12 ~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~~ 77 (315)
+|..+.+.|.+.+ ++++++ +++|+++..+++++ .|.+.+|++++||+||.|+|.+|..+..+|..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCc
Confidence 5668888887765 467888 57999999887774 57788888999999999999999888776654
No 53
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.32 E-value=0.0054 Score=55.00 Aligned_cols=59 Identities=17% Similarity=0.172 Sum_probs=46.4
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCchhhhhhh
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S~vr~~l 74 (315)
..|.+.|.+.+ .+++|+++++|+++..++++++ |.. +|++++||.||-|-|..... +.+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~-~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATA-VLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHH-HHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHH-Hhc
Confidence 44666666665 3589999999999999888766 655 47899999999999998764 355
No 54
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.28 E-value=0.0079 Score=53.97 Aligned_cols=59 Identities=25% Similarity=0.304 Sum_probs=46.8
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhC
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLG 75 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~ 75 (315)
..|.+.|.+.+ .+++|+++++|++++.+++++ | ..+|++++||.||-|-|..... +.++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 35666676655 359999999999999888888 5 5678899999999999998654 4554
No 55
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.22 E-value=0.052 Score=49.39 Aligned_cols=55 Identities=18% Similarity=0.163 Sum_probs=47.4
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.|.+.|.+.+..++|+++++|++|+.++++++|++.+| +++||.||.|-+.....
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~ 291 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVV 291 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHH
Confidence 47777887776689999999999999988999999888 89999999999887543
No 56
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.09 E-value=0.0016 Score=60.68 Aligned_cols=66 Identities=17% Similarity=0.250 Sum_probs=51.4
Q ss_pred eHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchh----hhhhhCCC
Q 021261 12 RRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSI----VAKWLGFK 77 (315)
Q Consensus 12 ~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~----vr~~l~~~ 77 (315)
....+.+.|.+.+ .+++|+++++|++++.+++++ .|.+.+|++++||+||.|||.+|. ..+.+|+.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 3456666666654 469999999999999877764 488999999999999999999995 33444555
No 57
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.84 E-value=0.002 Score=59.08 Aligned_cols=53 Identities=9% Similarity=0.135 Sum_probs=44.8
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCC---CEEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG---TILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g---~~~~ad~vVgADG~~ 67 (315)
.|.+.|.+.++..+|+++++|++|+.++++++|++.+| ++++||.||.|-+..
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 46666776665578999999999999999999998887 689999999999876
No 58
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.80 E-value=0.00078 Score=55.95 Aligned_cols=37 Identities=24% Similarity=0.161 Sum_probs=33.5
Q ss_pred CCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 191 SRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 191 ~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
..+||+|+|||+ .|.|++.||.||..+|+.|.++|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999995 4789999999999999999999886
No 59
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.79 E-value=0.2 Score=44.67 Aligned_cols=51 Identities=25% Similarity=0.483 Sum_probs=42.0
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
.|.+.|.++.. +|+.+++|++|+.++++++|++.+|++++||.||.|-|..
T Consensus 208 ~l~~~~~~~~g--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEIP--EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTCS--CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhCC--ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 34444444433 9999999999999888899999999999999999999965
No 60
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.75 E-value=0.089 Score=48.09 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=45.0
Q ss_pred HHHHHHHhhC--CC-CcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKEL--PS-GTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~-~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|.+.|.+.+ .+ ++|+++++|++|+.+++++.|++.+|++++||.||.|-|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 4555565554 23 6799999999999888889999999989999999999998654
No 61
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.72 E-value=0.07 Score=48.91 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=44.8
Q ss_pred HHHHHHHHhhCCCCcEEecceEEEEEeeCCe------eEEEec--CC---CEEeecEEEecCCCchhh
Q 021261 14 KLLLETLAKELPSGTIRYSSQVVSIEESGHF------KLLHLA--DG---TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 14 ~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~------~~v~~~--~g---~~~~ad~vVgADG~~S~v 70 (315)
..|.+.|.++++..+|++|++|++|+.++++ +.|++. +| ++++||.||.|-...-..
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 3566777777655799999999999988776 677775 45 578999999999987544
No 62
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.69 E-value=0.094 Score=47.65 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=44.2
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEe---cCCCEEeecEEEecCCCchhhhhhh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL---ADGTILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~---~~g~~~~ad~vVgADG~~S~vr~~l 74 (315)
.|.+.|.+.+ +++|+++++|++|+.+++++.|.+ .+|++++||.||.|-+.... .+.+
T Consensus 239 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~-~~ll 299 (478)
T 2ivd_A 239 VLIDALAASL-GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT-AKLL 299 (478)
T ss_dssp HHHHHHHHHH-GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH-HHHH
T ss_pred HHHHHHHHHh-hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH-HHHh
Confidence 3555566554 468999999999998877888888 67889999999999998764 3444
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.60 E-value=0.0028 Score=55.63 Aligned_cols=65 Identities=12% Similarity=0.147 Sum_probs=53.3
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCC-eeEEEecCCCEEeecEEEecCCCchhhhhhhC
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGVNSIVAKWLG 75 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~-~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~ 75 (315)
+.+..+.+.|.+.+. +++++++++|++++.+++ .+.|.+.+|+++++|+||.|+|.+|..++.++
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCG
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCC
Confidence 567888888877653 488999999999998765 67888889989999999999999886665543
No 64
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.59 E-value=0.0045 Score=52.56 Aligned_cols=63 Identities=11% Similarity=0.130 Sum_probs=48.8
Q ss_pred eHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCee-EEEec---------CC-----CEEeecEEEecCCCchhhhhh
Q 021261 12 RRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLA---------DG-----TILKTKVLIGCDGVNSIVAKW 73 (315)
Q Consensus 12 ~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~~-~v~~~---------~g-----~~~~ad~vVgADG~~S~vr~~ 73 (315)
++..+...|.+++ .+++++++++|+++..+++.+ .|.+. ++ .+++||+||.|+|.+|.++..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHH
Confidence 6777887887765 469999999999999877753 33332 22 579999999999999988765
Q ss_pred h
Q 021261 74 L 74 (315)
Q Consensus 74 l 74 (315)
.
T Consensus 197 ~ 197 (284)
T 1rp0_A 197 G 197 (284)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.58 E-value=0.0035 Score=56.11 Aligned_cols=56 Identities=23% Similarity=0.169 Sum_probs=46.3
Q ss_pred eHHHHHHHHHhhC--CCCcEEecceEEEEEee----CCeeEEEecCCCEEeecEEEecCCCch
Q 021261 12 RRKLLLETLAKEL--PSGTIRYSSQVVSIEES----GHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 12 ~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~----~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
.+..+.+.|.+.+ .+++|+++++|+++..+ ++++.|...++ +++||.||.|+|.+|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 5677777777765 35999999999999876 55677877766 899999999999999
No 66
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.57 E-value=0.0033 Score=57.05 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=49.4
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecC---CC---EEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLAD---GT---ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~---g~---~~~ad~vVgADG~~S~v 70 (315)
++|..+.+.|.+.+. +..++++++|++++..+++++|++.+ |+ ++++|.||.|+|.+|.-
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 568888888877653 36799999999999888888888776 66 79999999999998753
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.54 E-value=0.0058 Score=53.09 Aligned_cols=58 Identities=14% Similarity=0.026 Sum_probs=49.6
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.+|..+.+.|.+.+ .+++++++++|++++.+++.+. |...++ ++++|.||.|+|.+|.
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 73 PARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp CBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 46778888887655 3589999999999999988888 888887 8999999999999874
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.53 E-value=0.0045 Score=53.54 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=53.5
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCC
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGF 76 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~ 76 (315)
+.+..+.+.|.+.+. +++++++++|.+++.+++.+.|...+|+++++|.||.|+|.+|...+.+++
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i 129 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGA 129 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCC
Confidence 567777777776553 478999999999998877888888888899999999999998866655543
No 69
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.46 E-value=0.052 Score=52.70 Aligned_cols=44 Identities=20% Similarity=0.134 Sum_probs=39.5
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
.+++|+++++|++|+.++++++|++.+|++++||.||.|-....
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~v 585 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLAL 585 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHH
Confidence 35789999999999998888999999999999999999997653
No 70
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.22 E-value=0.006 Score=57.69 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=52.3
Q ss_pred eeeHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhhhhhhCC
Q 021261 10 CVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIVAKWLGF 76 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~ 76 (315)
.++|..+.+.|.+.+ ++++| ++++|+++..+++.+ .|.+.+|.+++||.||.|+|.+|..+...|.
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G~ 189 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGL 189 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC-
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccccCc
Confidence 578888888888765 46888 568999998776664 6788888899999999999999877665443
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.18 E-value=0.014 Score=54.37 Aligned_cols=60 Identities=15% Similarity=0.220 Sum_probs=50.2
Q ss_pred eeeHHHHHHHHHhhCC--CC--cEEecceEEEEEeeCC--eeEEEecCCCEEeecEEEecCCCchh
Q 021261 10 CVRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~--~~--~i~~~~~v~~~~~~~~--~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..++.++.+.|.+.+. ++ .++++++|++++.+++ .++|++++|++++||+||.|+|..|.
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccccc
Confidence 4678888888876552 34 8999999999998765 68899999999999999999998774
No 72
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.16 E-value=0.034 Score=50.97 Aligned_cols=52 Identities=12% Similarity=0.270 Sum_probs=43.5
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCC----EEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGT----ILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~----~~~ad~vVgADG~~ 67 (315)
.|.+.|.+.++. +|+++++|++|+.+++++.|++.+|+ +++||.||.|=+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 566677776654 89999999999998888999888775 58999999999976
No 73
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.15 E-value=0.076 Score=47.89 Aligned_cols=57 Identities=11% Similarity=0.040 Sum_probs=44.2
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCe-eEEEecCCCEEeecEEEecCCCchhhhhhh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~~~ad~vVgADG~~S~vr~~l 74 (315)
.|.+.|.+.+ +++|+++++|++|+.++++ +.|.. ++.+++||.||.|-+.. .+++.+
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l~ 273 (453)
T 2yg5_A 216 QVSIRMAEAL-GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN-LYSRIS 273 (453)
T ss_dssp HHHHHHHHHH-GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGSE
T ss_pred HHHHHHHHhc-CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcCE
Confidence 4555555554 4799999999999998888 88876 67899999999999987 344443
No 74
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.08 E-value=0.011 Score=55.45 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=48.9
Q ss_pred eHHHHHHHHHhhC--CCCcEEecceEEEEEeeC-CeeE-EEe--cCCC--EEeecEEEecCCCchhhhhhh
Q 021261 12 RRKLLLETLAKEL--PSGTIRYSSQVVSIEESG-HFKL-LHL--ADGT--ILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 12 ~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~~~-v~~--~~g~--~~~ad~vVgADG~~S~vr~~l 74 (315)
....|.+.|.+.+ .+++|+++++|+++..++ +++. |.+ .+|+ +++||.||.|+|.+|..++.+
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 4667778887766 469999999999998876 5432 444 3675 789999999999999876544
No 75
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.95 E-value=0.011 Score=50.54 Aligned_cols=61 Identities=11% Similarity=0.105 Sum_probs=50.2
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhh
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr 71 (315)
.+++..+.+.|.+.+ .+++++. ++|++++.+++.+.|.+.+|+++++|+||.|+|.++.+.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 467888888887755 3488888 799999988888888888899999999999999877543
No 76
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=95.83 E-value=0.014 Score=50.85 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=45.4
Q ss_pred eHHHHHHHHHhhC---CCCcEEecceEEEEEeeCC-------------------e---eEEEe----c--------CCCE
Q 021261 12 RRKLLLETLAKEL---PSGTIRYSSQVVSIEESGH-------------------F---KLLHL----A--------DGTI 54 (315)
Q Consensus 12 ~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~-------------------~---~~v~~----~--------~g~~ 54 (315)
+..++.+.|.+++ ++++++++++++++..+++ . +.+.. . ++.+
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~ 237 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNT 237 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEE
T ss_pred cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceE
Confidence 3567777777754 5789999999999987652 2 22221 1 2247
Q ss_pred EeecEEEecCCCchhhhhhh
Q 021261 55 LKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 55 ~~ad~vVgADG~~S~vr~~l 74 (315)
++|++||+|+|..|.+++.+
T Consensus 238 i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 238 INAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EECSEEEECCCSSSSSSCHH
T ss_pred EEcCEEEECCCCCchhhHHH
Confidence 99999999999999976554
No 77
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.81 E-value=0.016 Score=54.00 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=48.1
Q ss_pred eeHHHHHHHHHhhC---C-CCcEEecceEEEEEeeCC--eeEEEecCCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKEL---P-SGTIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~---~-~~~i~~~~~v~~~~~~~~--~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
..+.++.+.|.+.+ . ...++++++|++++.+++ .++|++++|++++||+||.|+|..|.-
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 56777777765533 2 268999999999998754 588999999999999999999998754
No 78
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.80 E-value=0.02 Score=54.12 Aligned_cols=62 Identities=10% Similarity=0.041 Sum_probs=50.8
Q ss_pred eeeHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCeeE-EEecCCCEEeecEEEecCCCchhhhh
Q 021261 10 CVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFKL-LHLADGTILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~~~-v~~~~g~~~~ad~vVgADG~~S~vr~ 72 (315)
.++|..+.+.|.+.+ ++++++ +.+|+.+..+++++. |.+.+|.+++||.||.|+|.++..+-
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLI 178 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEE
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccc
Confidence 678888888888765 568885 569999988887765 88889999999999999999876443
No 79
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.74 E-value=0.015 Score=54.76 Aligned_cols=64 Identities=19% Similarity=0.063 Sum_probs=51.7
Q ss_pred eeeHHHHHHHHHhhC---CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhhhhhh
Q 021261 10 CVRRKLLLETLAKEL---PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~vr~~l 74 (315)
.++|..+.+.|.+.+ ++++| ++++|+++..+++++ .|...+|.+++||.||.|+|.+|..+...
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 568888888888765 46888 578999998877765 58888999999999999999988765543
No 80
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.69 E-value=0.33 Score=46.27 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=36.6
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecC------CCEEeecEEEecCCCc
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLAD------GTILKTKVLIGCDGVN 67 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~------g~~~~ad~vVgADG~~ 67 (315)
+.+|++|++|++|+.++++++|++.+ +.+++||.||.|=...
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHH
T ss_pred cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHH
Confidence 46899999999999999999998876 5689999999998754
No 81
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.69 E-value=0.027 Score=49.86 Aligned_cols=56 Identities=14% Similarity=0.259 Sum_probs=45.9
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+.+.|.+.+ .+++++++++|.+++.+++++.|.+.+|+++++|+||.|.|..+.+
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 3444444433 4699999999999998888888999999999999999999998765
No 82
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.62 E-value=0.19 Score=46.95 Aligned_cols=66 Identities=14% Similarity=-0.003 Sum_probs=48.2
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEec---CCC--EEeecEEEecCCCch-hhhhhhCC
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLA---DGT--ILKTKVLIGCDGVNS-IVAKWLGF 76 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~---~g~--~~~ad~vVgADG~~S-~vr~~l~~ 76 (315)
++-..|...|.+.+ .+++|+.+++|+++..+++++ .|.+. +|+ +++||.||-|.|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 34555666666654 469999999999999887763 45553 343 799999999999998 45665554
No 83
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.47 E-value=0.014 Score=50.40 Aligned_cols=59 Identities=17% Similarity=0.057 Sum_probs=47.8
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+.+..+.+.|.+.+ .+++++.++ |++++.+++.++|.+ ++.++++|+||.|+|.++..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 367788888887755 358999987 999988777777877 77899999999999998754
No 84
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.42 E-value=0.035 Score=51.73 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=48.3
Q ss_pred eeHHHHHHHHHhhCC--CC--cEEecceEEEEEeeCC--eeEEEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~--~i~~~~~v~~~~~~~~--~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.++.++.+.|.+.+. ++ .++++++|++++.+++ .++|++.+|++++||+||.|+|..|.
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 467777777766542 33 8999999999988765 68899999999999999999998764
No 85
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.39 E-value=0.033 Score=50.55 Aligned_cols=56 Identities=14% Similarity=0.168 Sum_probs=45.4
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+.+.|.+.+ .+++++++++|++++.+++++.|.+.+|+++++|.||.|.|..+.+
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 3444444433 3699999999999998888888888889999999999999998765
No 86
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.37 E-value=0.055 Score=47.30 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=37.9
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..++...|.+.|.+++ .+++++. ++|++++.+ .+ +||.||.|+|.+|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------CS-SCSEEEECCGGGGG
T ss_pred ceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------Cc-CCCEEEECCCcchh
Confidence 4578889999999876 3588888 888877543 12 89999999999984
No 87
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.35 E-value=0.027 Score=52.78 Aligned_cols=60 Identities=8% Similarity=0.041 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhC--CCCcEEecceEEEEEeeC-CeeE-EEec--CCC--EEeecEEEecCCCchhhhh
Q 021261 13 RKLLLETLAKEL--PSGTIRYSSQVVSIEESG-HFKL-LHLA--DGT--ILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 13 R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~~~-v~~~--~g~--~~~ad~vVgADG~~S~vr~ 72 (315)
...+.+.|.+.+ .+++|+++++|+++..++ +.+. |.+. +|+ +++||.||.|+|.+|..++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 467777777765 469999999999999876 5432 4443 665 7899999999999987543
No 88
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.24 E-value=0.05 Score=53.38 Aligned_cols=69 Identities=23% Similarity=0.317 Sum_probs=54.3
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhh-hhhhCCCC
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV-AKWLGFKN 78 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~v-r~~l~~~~ 78 (315)
..++...+.+.|.+.+ .+++|+.+++|++++.+++++ .|...+| +++||.||.|+|.+|.. .+.+|...
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~ 218 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAV 218 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCC
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCc
Confidence 3457788888888876 459999999999999887775 4666666 89999999999999854 34556543
No 89
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.98 E-value=0.057 Score=49.14 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=46.5
Q ss_pred HHHHHHHhhCC----------CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKELP----------SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~~----------~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|.+.|.+.+. +++|+++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 55666776652 46899999999999988889999999999999999999998644
No 90
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.81 E-value=0.03 Score=50.99 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=48.1
Q ss_pred eeeHHHHHHHHHhhCC--CCc--EEecceEEEEEeeCC--eeEEEecC---C--CEEeecEEEecCCCchhhh
Q 021261 10 CVRRKLLLETLAKELP--SGT--IRYSSQVVSIEESGH--FKLLHLAD---G--TILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~--~~~--i~~~~~v~~~~~~~~--~~~v~~~~---g--~~~~ad~vVgADG~~S~vr 71 (315)
.+++..+.+.|.+.+. +++ |+++++|++++..++ +++|++.+ | .++++|.||.|+|.+|.-+
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 3678888888877553 455 999999999998765 67777765 4 5789999999999876544
No 91
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=94.81 E-value=0.052 Score=50.06 Aligned_cols=56 Identities=18% Similarity=0.279 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCCCCcEEecceEEEEEee-CCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 14 KLLLETLAKELPSGTIRYSSQVVSIEES-GHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 14 ~~L~~~L~~~~~~~~i~~~~~v~~~~~~-~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..|.+.|.+.+++.+|++|++|++|..+ ++++.|.+.+|++++||.||.|-+....
T Consensus 202 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 202 DSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 4556666666666789999999999986 5679999999999999999999987644
No 92
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.72 E-value=0.058 Score=48.86 Aligned_cols=46 Identities=15% Similarity=0.081 Sum_probs=40.4
Q ss_pred CCcEEecceEEEEEeeCCe-eEEEecCCCEEeecEEEecCCCchhhh
Q 021261 26 SGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~~~ad~vVgADG~~S~vr 71 (315)
+++++++++|.+++.++++ +.|.+++|+++++|+||.|.|..+.+.
T Consensus 222 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 222 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 6999999999999886654 788899999999999999999987663
No 93
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.68 E-value=0.044 Score=46.63 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=47.7
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeC---CeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESG---HFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~---~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
..+..+.+.|.+.+ .+++++.+++|+.++.+. +.+.|.+++|+++++|.||.|+|.++..
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 46677777776654 358999999999997653 2578888889899999999999997643
No 94
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.65 E-value=0.065 Score=49.01 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=41.6
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr 71 (315)
+++++.+++|.+++.+++++.|.+++|+++.||.||.|.|..+.+.
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 6999999999999988888889999999999999999999876653
No 95
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.60 E-value=0.055 Score=46.33 Aligned_cols=61 Identities=21% Similarity=0.271 Sum_probs=49.6
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCC-eeEEEecCCCEEeecEEEecCCCchhhhh
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~-~~~v~~~~g~~~~ad~vVgADG~~S~vr~ 72 (315)
+.+..+.+.|.+.+. +++++++++|++++.+++ .+.|.+.+|+ +++|.||.|.|.+|...+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 467888888887664 489999999999998876 6788888876 999999999999654333
No 96
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.58 E-value=0.04 Score=51.31 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=47.7
Q ss_pred eeHHHHHHHHHhhCC--CC--cEEecceEEEEEeeCC--eeEEEecCCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKELP--SG--TIRYSSQVVSIEESGH--FKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~--~i~~~~~v~~~~~~~~--~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
..+.++.+.|.+.+. ++ .++++++|++++.+++ .++|++++|++++||+||.|+|..|.-
T Consensus 84 ~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 84 ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 567777777766542 23 8999999999987654 588999999999999999999987643
No 97
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.47 E-value=0.083 Score=48.03 Aligned_cols=46 Identities=17% Similarity=0.088 Sum_probs=41.1
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCC-EEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGT-ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~-~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.+.+|+ ++.+|+||.|.|....+
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 46999999999999987777889999999 89999999999988755
No 98
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.43 E-value=0.063 Score=49.52 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=45.4
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|.+.|.+.+ +++|++|++|++++.++++++|.+.+|++++||.||.|.+....
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 4555555554 57899999999999888888899999999999999999999864
No 99
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.16 E-value=0.1 Score=47.37 Aligned_cols=47 Identities=13% Similarity=0.098 Sum_probs=40.6
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec-C--CC--EEeecEEEecCCCchhhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA-D--GT--ILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~-~--g~--~~~ad~vVgADG~~S~vr 71 (315)
.+++++++++|++++.+++++.|.+. + |+ ++.+|+||.|.|..+.+.
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 46999999999999988777888886 6 76 899999999999887654
No 100
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.10 E-value=0.14 Score=42.91 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=48.3
Q ss_pred eeeHHHHHHHHHhhCC---CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhh
Q 021261 10 CVRRKLLLETLAKELP---SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~---~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr 71 (315)
.+....+.+.|.+.+. ++++. ..+|++++.+++++.|.+.+++++++|.||.|+|..+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 3566777777777653 34554 4699999998888899999999999999999999976543
No 101
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.08 E-value=0.096 Score=49.05 Aligned_cols=62 Identities=16% Similarity=0.100 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhC--CCCcEEecceEEEEEeeC-Cee-EEEec--CCC--EEeecEEEecCCCchhhhhhh
Q 021261 13 RKLLLETLAKEL--PSGTIRYSSQVVSIEESG-HFK-LLHLA--DGT--ILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 13 R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~-~~~-~v~~~--~g~--~~~ad~vVgADG~~S~vr~~l 74 (315)
...+.+.|.+.+ .+++|+++++|+++..++ +.+ .|.+. +|+ +++||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 556777777765 469999999999998765 442 24443 664 689999999999998765433
No 102
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.95 E-value=0.081 Score=45.61 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=45.4
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEE-EecCCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLL-HLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v-~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+.+..+.+.|.+.+ .+++++.++ +.+++. ++.++| .+.+++++++|.||.|+|.++..
T Consensus 68 ~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 68 ITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 56777777776654 358899987 888887 555677 78888899999999999997643
No 103
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.94 E-value=0.12 Score=45.08 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=45.8
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+.+..+.+.|.+.+ .+++++++++|++++.+++++.|...++ ++++|.||.|.|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 45666766665543 3589999999999998777788887776 6899999999999763
No 104
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=93.88 E-value=0.068 Score=46.45 Aligned_cols=49 Identities=24% Similarity=0.237 Sum_probs=37.1
Q ss_pred eeeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 9 RCVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..++...+.+.|.+++ .+++++. ++|++++..+ .++||.||.|+|.+|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG 187 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH
Confidence 4567788888888876 4588887 8887765432 2679999999999984
No 105
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.85 E-value=0.11 Score=44.55 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=45.8
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEee--CCe-eEEEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEES--GHF-KLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~--~~~-~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++..+.+.|.+.+ .+++++. .+|++++.+ ++. +.|...+|+++++|+||.|+|.++.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 56778887777655 3588887 689999876 444 6788888899999999999998764
No 106
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.77 E-value=0.13 Score=46.88 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=43.3
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh--hhhhCCC
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV--AKWLGFK 77 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v--r~~l~~~ 77 (315)
.+++++.+++|.+++.++++++|.+.+|+++.||.||-|-|..... -+.+|+.
T Consensus 215 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCC
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCcc
Confidence 4699999999999988777788889999999999999999987543 3344443
No 107
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.68 E-value=0.15 Score=46.66 Aligned_cols=55 Identities=18% Similarity=0.195 Sum_probs=44.4
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.+.+.+.+.+ .+++++.+++|.+++.+++.+.|.+.+|+++.||+||.|-|....
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 3444444433 469999999999998877777889999999999999999998754
No 108
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.67 E-value=0.13 Score=48.58 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=47.0
Q ss_pred HHHHHHHHhhC--CC-CcEEecceEEEEEeeCCe---eEEE-ecCCC--EEeecEEEecCCCchhhhhhh
Q 021261 14 KLLLETLAKEL--PS-GTIRYSSQVVSIEESGHF---KLLH-LADGT--ILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 14 ~~L~~~L~~~~--~~-~~i~~~~~v~~~~~~~~~---~~v~-~~~g~--~~~ad~vVgADG~~S~vr~~l 74 (315)
..|...|.+++ .+ ++|+++++|+++..+++. +.+. ..+|+ +++|+.||.|+|.+|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 46777777765 23 899999999999987764 3232 35676 799999999999999987655
No 109
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.54 E-value=0.1 Score=44.47 Aligned_cols=58 Identities=16% Similarity=0.157 Sum_probs=45.7
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+.+..+.+.|.+.+ .+++++.++ ++.++.+++.++| ..++.++++|.||.|+|.++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 56777777776654 358899886 8899887777777 6788899999999999987643
No 110
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.53 E-value=0.14 Score=46.99 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=40.7
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.+.+|+++++|.||-|-|..+.+
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 4799999999999998777788888889999999999999988754
No 111
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.48 E-value=0.18 Score=44.76 Aligned_cols=53 Identities=23% Similarity=0.262 Sum_probs=42.8
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhh--hhhhCCC
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV--AKWLGFK 77 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~v--r~~l~~~ 77 (315)
.+++++++++|.+++.+++++ .|.+++|+++.||+||-|-|..... -+.+|+.
T Consensus 197 ~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 197 AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCC
Confidence 479999999999999877664 5889999999999999999986543 3344444
No 112
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.41 E-value=0.21 Score=44.54 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=40.1
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++++++|.+++.+++++ .|.+++|+++.||+||-|-|.....
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 479999999999998876664 6889999999999999999987654
No 113
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.20 E-value=0.12 Score=44.11 Aligned_cols=58 Identities=14% Similarity=0.028 Sum_probs=44.8
Q ss_pred eeeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 10 CVRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.+.+..+.+.|.+.+ .+++++. .+|++++.+++.+.|.. ++.++++|+||.|+|.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 356677777777655 2477877 78999988877777766 6678999999999998764
No 114
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.07 E-value=0.18 Score=45.00 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=42.6
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh--hhhhCCC
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV--AKWLGFK 77 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v--r~~l~~~ 77 (315)
.+++++++++|.+++.++....|.+++|+++.||+||-|-|..... -+.+|+.
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCC
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCc
Confidence 3699999999999987665457899999999999999999987653 3344444
No 115
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.04 E-value=0.27 Score=41.64 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=47.1
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+.+..+.+.|.+.+ .+++++. ++|++++.+++.+.|...++.++++|.||.|.|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 56778887777655 3588998 9999999888788899999899999999999999843
No 116
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.98 E-value=0.18 Score=45.66 Aligned_cols=60 Identities=18% Similarity=0.192 Sum_probs=46.4
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEee---CCe--eEEEecCCC----EEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEES---GHF--KLLHLADGT----ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~---~~~--~~v~~~~g~----~~~ad~vVgADG~~S~v 70 (315)
..|..+.+.|...+. +++++++++|++++.+ ++. ++|...+|+ +++||.||.|+|....+
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 124 PCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp CBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 468888888876543 3799999999999876 332 477777775 89999999999985543
No 117
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=92.93 E-value=0.19 Score=43.32 Aligned_cols=63 Identities=11% Similarity=0.209 Sum_probs=44.4
Q ss_pred eHHHHHHHHHhhC---CCCcEEecceEEEEEeeC----C--e---eEEEe----c--------CCCEEee----------
Q 021261 12 RRKLLLETLAKEL---PSGTIRYSSQVVSIEESG----H--F---KLLHL----A--------DGTILKT---------- 57 (315)
Q Consensus 12 ~R~~L~~~L~~~~---~~~~i~~~~~v~~~~~~~----~--~---~~v~~----~--------~g~~~~a---------- 57 (315)
+...+...|.+++ ++++++.+++|+++..++ + . +.+.. . ++.+++|
T Consensus 144 ~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~ 223 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRD 223 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCC
T ss_pred chHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccc
Confidence 5667777777754 578999999999998763 2 2 22321 1 3357999
Q ss_pred -----cEEEecCCCchhhhhhh
Q 021261 58 -----KVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 58 -----d~vVgADG~~S~vr~~l 74 (315)
++||.|+|..|.+.+.+
T Consensus 224 ~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 224 LSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp SSTTCCEEEECCCCC--CCSHH
T ss_pred ccccCCEEEECcCCCchHHHHH
Confidence 99999999999887766
No 118
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.84 E-value=0.24 Score=45.45 Aligned_cols=46 Identities=13% Similarity=0.078 Sum_probs=39.9
Q ss_pred CCCcEEecceEEEEEeeCC-eeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~-~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++++++|.+++.+++ .+.|.+.+|+++++|+||.|-|....+
T Consensus 248 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 248 NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 4799999999999987654 378889999999999999999987654
No 119
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.75 E-value=0.21 Score=45.49 Aligned_cols=45 Identities=22% Similarity=0.221 Sum_probs=38.8
Q ss_pred CCcEEecceEEEEEeeCCe--eEEEecCC-CEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHF--KLLHLADG-TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~--~~v~~~~g-~~~~ad~vVgADG~~S~v 70 (315)
+++++.+++|.+++.++++ +.|.+++| +++.+|+||.|-|....+
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 6999999999999876554 77889999 789999999999987665
No 120
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.68 E-value=0.17 Score=46.82 Aligned_cols=59 Identities=15% Similarity=0.179 Sum_probs=47.4
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeC---CeeEEEecCCCEEeecEEEecCCCchh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESG---HFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~---~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..+..|.+.|.+.+ .+++++.+++|+++..+. +.+.|.+++|.++++|.||.|+|.++.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 46677777777655 358999999999997542 357888899999999999999998764
No 121
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.61 E-value=0.19 Score=46.47 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=39.8
Q ss_pred CCCcEEecceEEEEEeeCCe----eEEEecCCC-EEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHF----KLLHLADGT-ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~----~~v~~~~g~-~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.++++ +.|.+.+|+ +++||.||-|-|..+.+
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 46999999999999876555 678888887 89999999999988765
No 122
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.54 E-value=0.23 Score=42.50 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=47.8
Q ss_pred eeHHHHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEec---CCCEEeecEEEecCCCchhh
Q 021261 11 VRRKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLA---DGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 11 i~R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~---~g~~~~ad~vVgADG~~S~v 70 (315)
+.+..+...|.+.+ .+++++.++ |++++.+++.+.+... ++.++++|.||.|+|..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 81 LTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 56778888777765 358999988 9999988888888774 66789999999999997543
No 123
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.41 E-value=0.24 Score=45.28 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=43.4
Q ss_pred HHHHHHhhC--CCCcEEecceEEEEEeeCC-eeEEEecCCCEEeecEEEecCCCchhh
Q 021261 16 LLETLAKEL--PSGTIRYSSQVVSIEESGH-FKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 16 L~~~L~~~~--~~~~i~~~~~v~~~~~~~~-~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+.+.|.+.+ .+++++++++|.+++.+++ .+.|.+.+|+++.+|.||.|-|....+
T Consensus 233 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 233 LRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 334444433 4699999999999987765 378889999999999999999987654
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.30 E-value=0.24 Score=44.81 Aligned_cols=46 Identities=7% Similarity=-0.007 Sum_probs=38.6
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec---CCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA---DGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~---~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.+. +++++++|+||.|.|....+
T Consensus 224 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 46999999999999988777777775 45689999999999988654
No 125
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.01 E-value=0.35 Score=44.32 Aligned_cols=46 Identities=26% Similarity=0.267 Sum_probs=39.4
Q ss_pred CCCcEEecceEEEEEeeCCe-eEEEecCCCE-EeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHF-KLLHLADGTI-LKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~-~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.++++ +.|.+.+|++ +.+|+||.|-|....+
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 46999999999999876543 7888899988 9999999999987654
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.00 E-value=0.28 Score=44.48 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=37.5
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec--CC--CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA--DG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~--~g--~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.++ +| +++++|.||.|.|..+.+
T Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 36999999999999887766777776 66 589999999999988754
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.60 E-value=0.38 Score=43.15 Aligned_cols=44 Identities=25% Similarity=0.223 Sum_probs=37.5
Q ss_pred CCcEEecceEEEEEe--eCCee-EEEecCCCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEE--SGHFK-LLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~--~~~~~-~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++++++++|.+++. +++++ .|.+++|+++.+|+||.|-|....
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 699999999999987 44444 688899999999999999998654
No 128
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.53 E-value=0.25 Score=45.08 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=39.5
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecC----CCEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLAD----GTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~----g~~~~ad~vVgADG~~S~v 70 (315)
+++++.+++|.+++.+++++.|.+.+ |+++.+|.||.|-|....+
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 59999999999999887777888877 7789999999999988755
No 129
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.47 E-value=0.45 Score=42.91 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=38.3
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++..++++.|.+.++ +++||.||-|-|....+
T Consensus 202 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 4699999999999997777777888777 89999999999987543
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.81 E-value=0.37 Score=43.85 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=41.5
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEe-eCCe-eEEEecCCCEEeecEEEecCCCc
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEE-SGHF-KLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~-~~~~-~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
..|.+.|.+.+ .+++|+.+++|.++.. ++++ +.|.+.+|++++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35666666654 4699999999999998 4444 56888899999999999999876
No 131
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.71 E-value=0.48 Score=43.51 Aligned_cols=55 Identities=11% Similarity=0.130 Sum_probs=40.8
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEee-CCee-EEEec-CCC--EEeec-EEEecCCCchh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEES-GHFK-LLHLA-DGT--ILKTK-VLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~-~~~~-~v~~~-~g~--~~~ad-~vVgADG~~S~ 69 (315)
.|.+.|.+.+ .+++|+++++|+++..+ ++.+ .|... +++ +++|| .||.|.|..|.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 6777777655 36999999999999987 3433 24443 332 68995 99999999984
No 132
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.71 E-value=0.4 Score=43.40 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=38.1
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec---CC--CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA---DG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~---~g--~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.++ +| +++.+|+||.|.|....+
T Consensus 231 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 231 QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 46999999999999877666777775 55 589999999999988654
No 133
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.69 E-value=0.58 Score=43.48 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=39.5
Q ss_pred CCCcEEecceEEEEEee-------------------CCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEES-------------------GHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~-------------------~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.++++++++++.+++.+ ++++.+.+.+|+++.||.||-|-|....+
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 47999999999999873 55678888999999999999999987653
No 134
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=90.29 E-value=0.6 Score=42.20 Aligned_cols=45 Identities=27% Similarity=0.318 Sum_probs=38.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEec-CC--CEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLA-DG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~-~g--~~~~ad~vVgADG~~S~v 70 (315)
+++++.+++|.+++.+++++.|.++ +| +++.+|+||-|-|....+
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 6999999999999887766777775 66 589999999999987654
No 135
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=89.89 E-value=0.48 Score=43.01 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=38.2
Q ss_pred CCCcEEecceEEEEEe--eCCeeEEEec-----CCCEEeecEEEecCCCchhhh
Q 021261 25 PSGTIRYSSQVVSIEE--SGHFKLLHLA-----DGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~--~~~~~~v~~~-----~g~~~~ad~vVgADG~~S~vr 71 (315)
.+++++.+++|++++. +++.+.|.+. +++++.+|.||.|.|....+.
T Consensus 237 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 237 QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 4799999999999987 5556777776 346899999999999887654
No 136
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=89.84 E-value=0.6 Score=42.37 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=37.9
Q ss_pred CCCcEEecceEEEEEeeCCe-eEEEe-----cCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHF-KLLHL-----ADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~-~~v~~-----~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.++++ +.|.+ .+++++++|+||.|.|....+
T Consensus 233 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 46999999999999987766 67765 355689999999999987654
No 137
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=89.83 E-value=0.45 Score=43.30 Aligned_cols=60 Identities=15% Similarity=0.046 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEec-CCCEEeecEEEecCCCchhhhhh
Q 021261 13 RKLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLA-DGTILKTKVLIGCDGVNSIVAKW 73 (315)
Q Consensus 13 R~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~-~g~~~~ad~vVgADG~~S~vr~~ 73 (315)
...+.+.|.+++ .+++++.+++| ++..+++.+ .|... ++.+++||.||.|+|..|.+...
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 345666676654 46999999999 998777654 23333 22357899999999999988654
No 138
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=89.82 E-value=0.74 Score=41.95 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=38.9
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecC---C--CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLAD---G--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~---g--~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.+.+ | +++.+|+||-|-|....+
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 369999999999999988888787763 5 589999999999987654
No 139
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=89.79 E-value=0.78 Score=41.31 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=37.6
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec---CCC--EEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~---~g~--~~~ad~vVgADG~~ 67 (315)
.+++++.+++|++++.+++++.|.++ +|+ ++.+|+||-|-|..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 46899999999999998888888887 665 49999999999986
No 140
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=89.70 E-value=0.63 Score=42.24 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=39.4
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC---CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG---TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g---~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.|.+.++ +++.+|.||-|-|....+
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 4699999999999998887888888765 589999999999987654
No 141
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=89.49 E-value=0.26 Score=44.29 Aligned_cols=55 Identities=18% Similarity=0.040 Sum_probs=43.9
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|-+.|.+.+ .+++|+++++|+++..+++++.+...+|++++||.||.|-|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 5666666554 368999999999999888876644468889999999999998864
No 142
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=89.41 E-value=1 Score=40.53 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=37.0
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++++.....+|+++++|.||-|-|....+
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 4799999999999987666664333478899999999999987654
No 143
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.33 E-value=0.63 Score=42.07 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=38.6
Q ss_pred CCCcEEecceEEEEEeeCCe-eEEE-ecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHF-KLLH-LADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~-~~v~-~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.++++ +.|. +++|+ +.+|.||-|-|.....
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 46999999999999987665 6788 88888 9999999999987654
No 144
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=89.05 E-value=0.85 Score=40.47 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=38.6
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh--hhhhCCC
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV--AKWLGFK 77 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v--r~~l~~~ 77 (315)
.+++++.+++|.+++ + + .|.+++|+++.||+||-|-|....+ -+.+|+.
T Consensus 200 ~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 200 QGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp TTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEEECCHHHHHHTCC
T ss_pred cCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCC
Confidence 469999999999998 3 3 6788899999999999999987543 3334444
No 145
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=88.99 E-value=1.2 Score=42.04 Aligned_cols=57 Identities=16% Similarity=-0.002 Sum_probs=43.8
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEe---cCCC--EEeecEEEecCCCchhh
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHL---ADGT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~---~~g~--~~~ad~vVgADG~~S~v 70 (315)
..+...|.+++ .+++|+.++.|+++..+++.+ .|.. .+|+ .++|+.||.|+|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 36777777765 459999999999998776643 2333 4665 78999999999999865
No 146
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.98 E-value=0.43 Score=43.19 Aligned_cols=45 Identities=16% Similarity=0.065 Sum_probs=35.5
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCchhhhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S~vr~ 72 (315)
.+++++.++.+. .+++.+.|...+| .++++|.||.|+|.++.+..
T Consensus 104 ~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~ 150 (464)
T 2a8x_A 104 NKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVP 150 (464)
T ss_dssp TTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCT
T ss_pred CCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 468999888654 3566788888888 68999999999999885543
No 147
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=88.25 E-value=1.3 Score=41.52 Aligned_cols=57 Identities=16% Similarity=0.095 Sum_probs=42.0
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEee-CCee-EEEe---cCCC--EEeecEEEecCCCchhh
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEES-GHFK-LLHL---ADGT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~~-~~~~-~v~~---~~g~--~~~ad~vVgADG~~S~v 70 (315)
..+.+.|.+++ .+++|+++++|+++..+ ++.+ .|.. .+|+ +++|+.||.|+|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 45666666654 46999999999999876 4432 2333 4565 68999999999998864
No 148
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=87.88 E-value=1.1 Score=40.48 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=41.7
Q ss_pred HHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 16 LLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 16 L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+.+.|.+.+ .+++++.+++|.+++.+++.+.|.+. +.++++|.||-|-|..+.+
T Consensus 218 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 218 IGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 334444433 46999999999999887776667776 4689999999999998764
No 149
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=87.81 E-value=0.87 Score=41.20 Aligned_cols=57 Identities=18% Similarity=0.257 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCCCCcEEecceEEEEEeeC-CeeEEEec--CCC--EEeecEEEecCCCchhhh
Q 021261 14 KLLLETLAKELPSGTIRYSSQVVSIEESG-HFKLLHLA--DGT--ILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 14 ~~L~~~L~~~~~~~~i~~~~~v~~~~~~~-~~~~v~~~--~g~--~~~ad~vVgADG~~S~vr 71 (315)
..+.+.|.+.+. ++++.++++.+++.++ +++.|.++ +|+ ++++|+||-|-|......
T Consensus 214 ~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 214 QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 345555555544 9999999999999877 78888888 676 899999999999876543
No 150
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=87.78 E-value=1.1 Score=40.89 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=42.5
Q ss_pred HHHHHHHhhCC-CCcEEecceEEEEEeeCCeeEEEec--CC--CEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKELP-SGTIRYSSQVVSIEESGHFKLLHLA--DG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~~-~~~i~~~~~v~~~~~~~~~~~v~~~--~g--~~~~ad~vVgADG~~S~v 70 (315)
.+.+.|.+.+. .++++.++++.+++.+++++.|.+. +| .++.+|.||-|-|....+
T Consensus 216 ~~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 216 EMKRYAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHHHHHHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred HHHHHHHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 33444444331 2899999999999988888888875 67 689999999999987543
No 151
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=87.62 E-value=0.63 Score=45.62 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=36.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecC------CCEEeecEEEecCCCc
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLAD------GTILKTKVLIGCDGVN 67 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~------g~~~~ad~vVgADG~~ 67 (315)
...|++|++|++|..++++++|++.+ +.+++||.||.+=-..
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~ 628 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 628 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHH
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHH
Confidence 35799999999999999999998865 4689999999987654
No 152
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=87.55 E-value=0.33 Score=45.01 Aligned_cols=57 Identities=16% Similarity=0.020 Sum_probs=39.2
Q ss_pred HHHHHHHhhC---CCCcEEecceEEEEEe-eCC------ee-EEEec---CCC--EEeecEEEecCCCchhhh
Q 021261 15 LLLETLAKEL---PSGTIRYSSQVVSIEE-SGH------FK-LLHLA---DGT--ILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 15 ~L~~~L~~~~---~~~~i~~~~~v~~~~~-~~~------~~-~v~~~---~g~--~~~ad~vVgADG~~S~vr 71 (315)
.+.+.|.+++ ++++|+++++|+++.. +++ .+ .|... +|+ +++|+.||.|+|..|.+-
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 3444444443 5799999999999987 433 43 24443 565 789999999999999763
No 153
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.31 E-value=1.3 Score=40.23 Aligned_cols=46 Identities=11% Similarity=0.016 Sum_probs=37.4
Q ss_pred CCCcEEecceEEEEEeeCC-eeEEEecCCC-----EEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGH-FKLLHLADGT-----ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~-~~~v~~~~g~-----~~~ad~vVgADG~~S~v 70 (315)
.+++++.++++.+++..++ .+.|.+.++. ++.+|+||-|-|....+
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCc
Confidence 4699999999999988655 4778887654 79999999999986543
No 154
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=86.65 E-value=1.1 Score=39.67 Aligned_cols=53 Identities=15% Similarity=0.158 Sum_probs=41.9
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.+.+.|.+.+. .+|+.+++|++|+.++++++|...+|+ ++||.||-|-+..-.
T Consensus 207 ~l~~~l~~~l~-~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATLE-HPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHSS-SCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhhc-ceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 44555555553 578999999999988888888888775 899999999988744
No 155
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.60 E-value=1.3 Score=38.25 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=35.9
Q ss_pred CcEEecceEEEEEeeCCeeEEEecCCCEEe-ecEEEecCCCch
Q 021261 27 GTIRYSSQVVSIEESGHFKLLHLADGTILK-TKVLIGCDGVNS 68 (315)
Q Consensus 27 ~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~-ad~vVgADG~~S 68 (315)
++++.+++|.+++.+++++.|.+.+|+++. +|.||-|-|...
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 899999999999877777788899998775 599999999764
No 156
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=86.56 E-value=1.2 Score=37.55 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=38.8
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEecC----C--CEEeecEEEecCCCch
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLAD----G--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~~----g--~~~~ad~vVgADG~~S 68 (315)
.+.+.|.+.+ .++++++++++.+++.+++++ .|.+.+ | .++.+|.||-|-|...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 3444444432 469999999999998776553 366654 4 4799999999999763
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.06 E-value=1.1 Score=39.75 Aligned_cols=49 Identities=10% Similarity=0.009 Sum_probs=37.2
Q ss_pred HHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 16 LLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 16 L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+.+.+.+.+ .+++++.+++|++++.+ + |.+++|+++++|+||-|-|...
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 444444333 36999999999999653 2 7889999999999999988653
No 158
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=85.91 E-value=2.2 Score=39.54 Aligned_cols=46 Identities=9% Similarity=-0.001 Sum_probs=42.1
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.++.+.+++..++++.|.+.++.++.+|.|+.|-|+.-.+
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCc
Confidence 4699999999999999999999999999999999999999987655
No 159
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=85.84 E-value=0.74 Score=41.58 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=42.2
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCe-eEEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHF-KLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~-~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|.+.|.+.+ .+++|+++++|++++.++++ +.|.. ++.+++||.||-|-+....
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4666666655 36899999999999987766 77765 5568999999999887654
No 160
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.77 E-value=1.2 Score=40.29 Aligned_cols=48 Identities=17% Similarity=0.025 Sum_probs=36.4
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCchhhhhhhCC
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNSIVAKWLGF 76 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S~vr~~l~~ 76 (315)
+++++.++.+. .+.+.+.|...+| .++++|.||.|+|.++.+....|.
T Consensus 110 gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~ 159 (470)
T 1dxl_A 110 KVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTI 159 (470)
T ss_dssp TCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCC
T ss_pred CCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCC
Confidence 58999998664 3556777877777 689999999999998765544443
No 161
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=85.65 E-value=0.86 Score=41.09 Aligned_cols=54 Identities=11% Similarity=-0.063 Sum_probs=41.9
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEee--CCee-EEEecCCCEEeecEEEecCCCchh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEES--GHFK-LLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~--~~~~-~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.|-+.|.+.+ .+++|+++++|+++..+ ++++ .|.. +|++++||.||.|-|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4666666654 46899999999999987 6664 4544 6889999999999998854
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=83.98 E-value=1.7 Score=40.54 Aligned_cols=44 Identities=25% Similarity=0.425 Sum_probs=37.3
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++.+++ .|.+.+|+++.+|.||-|-|.....
T Consensus 241 ~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 241 HDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp TTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEECC
T ss_pred cCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCCCh
Confidence 4699999999999987655 3777899999999999999987543
No 163
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.89 E-value=0.95 Score=40.53 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=36.7
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|+.++.++. .|.+++|+++++|.||.|+|..+..
T Consensus 73 ~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp TTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCccC
Confidence 3689999999999987654 4677888899999999999997654
No 164
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=83.87 E-value=1.7 Score=38.96 Aligned_cols=54 Identities=17% Similarity=0.130 Sum_probs=39.4
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+.+.|.+.+ .+++++.+++|.+++.+ +++ .|.+ ++.++++|.||.|.|....+
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCCh
Confidence 3444444443 46999999999999876 443 4555 56789999999999987654
No 165
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.73 E-value=1.4 Score=37.44 Aligned_cols=52 Identities=17% Similarity=0.180 Sum_probs=38.6
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCee-EEEecC-----CCEEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLAD-----GTILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~-~v~~~~-----g~~~~ad~vVgADG~~ 67 (315)
.+.+.|.+ ..+++++.++++.+++.+++++ .|.+++ +.++.+|+||-|-|..
T Consensus 213 ~~~~~l~~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 213 IMQKRAEK-NEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHH-CTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHHh-cCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 34444443 2479999999999999877654 366665 3579999999999975
No 166
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=83.28 E-value=1.2 Score=40.48 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=42.9
Q ss_pred HHHHHHHHhhCCC--CcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 14 KLLLETLAKELPS--GTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 14 ~~L~~~L~~~~~~--~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
..|.+.|.+.++. ++|+.+++|+++..++.. |++.+|++++||.||-+--....
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l 277 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFL 277 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHH
Confidence 4577788887754 899999999999887664 66889999999999987655433
No 167
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=83.09 E-value=2.5 Score=35.87 Aligned_cols=54 Identities=9% Similarity=0.043 Sum_probs=38.6
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCeeEEEec---CC--CEEeecEEEecCCCch
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHFKLLHLA---DG--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~~~v~~~---~g--~~~~ad~vVgADG~~S 68 (315)
.+.+.|.+.+ .+++++.++++.+++.++....|.++ +| .++.+|.||-|-|...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 3344444433 36999999999999875432356665 67 5799999999999864
No 168
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.00 E-value=1.6 Score=39.40 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=34.8
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S~v 70 (315)
+++++.+++|.+++. + ++.+...+| +++.+|.||.|.|....+
T Consensus 226 gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp TCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred CCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 699999999999987 3 365654456 689999999999987654
No 169
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=82.55 E-value=2.3 Score=38.51 Aligned_cols=46 Identities=15% Similarity=-0.072 Sum_probs=37.0
Q ss_pred CCCcEEecceEEEEEeeCCe--eEEEecC---C----CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHF--KLLHLAD---G----TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~--~~v~~~~---g----~~~~ad~vVgADG~~S~v 70 (315)
.+++++.++++.+++.++++ +.|.+.+ | .++.+|.||-|-|....+
T Consensus 241 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 46999999999999877555 6777775 2 578999999999986543
No 170
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=82.25 E-value=2.7 Score=38.23 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=34.8
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|++++. ++++ .|.+ +|+++.+|.||-|-|....+
T Consensus 249 ~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp TTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred CCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 4699999999999986 3333 3555 77899999999999987543
No 171
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=81.81 E-value=3.2 Score=39.46 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=41.7
Q ss_pred HHHHHHHhhC--CCCcEEecceEEEEEeeCCe---eEEEe-cCCC--EEeecEEEecCCCchhh
Q 021261 15 LLLETLAKEL--PSGTIRYSSQVVSIEESGHF---KLLHL-ADGT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~--~~~~i~~~~~v~~~~~~~~~---~~v~~-~~g~--~~~ad~vVgADG~~S~v 70 (315)
.+...|.+++ .+++|+.++.|+++..+++. +.+.- .+|+ .++|+.||.|.|..+.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 4666666654 36999999999999876664 33322 4665 58999999999998865
No 172
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=81.58 E-value=2.5 Score=38.39 Aligned_cols=56 Identities=16% Similarity=0.424 Sum_probs=44.3
Q ss_pred HHHHHHHHhhCCCCcEEecc--eEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhh
Q 021261 14 KLLLETLAKELPSGTIRYSS--QVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVA 71 (315)
Q Consensus 14 ~~L~~~L~~~~~~~~i~~~~--~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr 71 (315)
..|.+.|.+.++..+|++++ +|++|+.+++++ ++.+|++++||.||-|=......+
T Consensus 216 ~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 216 GIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp HHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHH
Confidence 56778888877656899995 599999877764 458889999999999988776543
No 173
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=81.49 E-value=2 Score=38.81 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=32.9
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC--CE------EeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG--TI------LKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~------~~ad~vVgADG~~S 68 (315)
.+++++.++.+.. +++.++|...+| .+ +++|.||.|+|.++
T Consensus 109 ~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 109 NKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp TTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 4689999987652 556678887777 56 99999999999876
No 174
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=81.42 E-value=1.8 Score=39.31 Aligned_cols=43 Identities=16% Similarity=0.065 Sum_probs=33.0
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC------------CEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG------------TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g------------~~~~ad~vVgADG~~S~v 70 (315)
.+++++.++.+. .+++.+.|...+| .++++|.||.|+|.++.+
T Consensus 108 ~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 108 RKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp TTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred CCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 468899888654 3456677776666 679999999999998754
No 175
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=80.94 E-value=2.6 Score=38.51 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=45.5
Q ss_pred eeeeHHHHHHHHHhhCCC--CcEEecceEEEEEeeCC--------eeEEEecCC-----CEEeecEEEecCCCc
Q 021261 9 RCVRRKLLLETLAKELPS--GTIRYSSQVVSIEESGH--------FKLLHLADG-----TILKTKVLIGCDGVN 67 (315)
Q Consensus 9 ~~i~R~~L~~~L~~~~~~--~~i~~~~~v~~~~~~~~--------~~~v~~~~g-----~~~~ad~vVgADG~~ 67 (315)
....|.++.+.|..-+.. ..|++|++|++++..++ .++|+..++ .++.|+.||.|-|..
T Consensus 140 ~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 140 FLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp SCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 457899999988876544 56999999999986532 377877654 268999999999953
No 176
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=80.88 E-value=1.2 Score=39.30 Aligned_cols=54 Identities=6% Similarity=-0.056 Sum_probs=43.0
Q ss_pred HHHHHHHHhhC------CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 14 KLLLETLAKEL------PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 14 ~~L~~~L~~~~------~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
..++..+.+.+ .+++++.++++..++.+.+...|.+++|+++.+|+||.|=|..
T Consensus 198 ~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 198 AQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp HHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE
T ss_pred ccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC
Confidence 34455554433 2389999999999998888888999999999999999998864
No 177
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=80.86 E-value=1.8 Score=39.40 Aligned_cols=51 Identities=16% Similarity=0.036 Sum_probs=40.4
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh--hhhhCC
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV--AKWLGF 76 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v--r~~l~~ 76 (315)
+++++.+++|.+++.++....|.+.+|+++.+|+||-|-|..+.+ -+.+|.
T Consensus 271 GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTC
T ss_pred CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCC
Confidence 689999999999986554445778889999999999999987653 344444
No 178
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=80.84 E-value=3 Score=34.95 Aligned_cols=53 Identities=21% Similarity=0.222 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecC---CC--EEeecEEEecCCCch
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD---GT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~---g~--~~~ad~vVgADG~~S 68 (315)
.+.+.|.+ ..+++++.++++.+++.++....|.+++ |+ ++.+|+||-|-|...
T Consensus 194 ~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 194 IYVETVKK-KPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp HHHHHHHT-CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred HHHHHHHh-CCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 34444443 2469999999999998775545577765 76 799999999999764
No 179
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=80.19 E-value=3.8 Score=34.32 Aligned_cols=51 Identities=14% Similarity=-0.040 Sum_probs=37.6
Q ss_pred HHHHHHhhCCCCcEEecceEEEEEeeCCee-EEEec---CCC--EEeecEEEecCCCc
Q 021261 16 LLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLA---DGT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 16 L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~-~v~~~---~g~--~~~ad~vVgADG~~ 67 (315)
+.+.|.+ ..+++++.++++.+++.+++++ .|.++ +|+ ++.+|.||-|-|..
T Consensus 184 ~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 184 TLEHAKN-NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHT-CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHhh-CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 4444442 2469999999999998875553 46665 565 78999999999975
No 180
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=79.73 E-value=2.1 Score=37.71 Aligned_cols=40 Identities=25% Similarity=0.255 Sum_probs=35.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
+++++.+++|++++.+.. +|++++|+++.+|.||-|.|..
T Consensus 76 ~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCC
Confidence 588999999999987665 5778899999999999999974
No 181
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=79.57 E-value=2.7 Score=36.21 Aligned_cols=44 Identities=30% Similarity=0.314 Sum_probs=34.7
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEec--CC--CEEeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLA--DG--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~--~g--~~~~ad~vVgADG~~S 68 (315)
.++++++++++.+++.+++++ .|.+. +| .++.+|+||-|-|...
T Consensus 215 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 358999999999998876653 45553 77 5799999999999753
No 182
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=79.16 E-value=2.1 Score=38.82 Aligned_cols=45 Identities=9% Similarity=0.087 Sum_probs=36.7
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCchh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S~ 69 (315)
.+++++.+++|+.++.+++.+.+.. .+|+ ++++|.||.|+|....
T Consensus 106 ~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 106 YGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp TCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred cCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 3689999999999988777777665 4576 7999999999997653
No 183
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=79.07 E-value=4.1 Score=33.99 Aligned_cols=43 Identities=16% Similarity=0.072 Sum_probs=34.5
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEec--CCC--EEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLA--DGT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~--~g~--~~~ad~vVgADG~~ 67 (315)
.++++++++++.+++.+++++ .|.++ +|+ ++.+|+||-|-|..
T Consensus 196 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 196 EKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 479999999999998877542 35554 776 78999999999975
No 184
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=78.41 E-value=0.61 Score=39.94 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=33.7
Q ss_pred CCcEEEeccCCCCCCCCCccchh--hhhhHHHHHHHHHHHHHh
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGC--AALEDGIVLARCINEALK 232 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~--~al~da~~La~~l~~~~~ 232 (315)
-.+|+.+||||..+++...+|.. .+|.++...|+.|.++|.
T Consensus 283 vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp SBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 46899999999999988888844 357889999999888764
No 185
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=77.07 E-value=4.7 Score=36.53 Aligned_cols=46 Identities=9% Similarity=-0.059 Sum_probs=35.9
Q ss_pred CCCcEEecceEEEEEeeC-CeeEEEecC---CC--EEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESG-HFKLLHLAD---GT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~-~~~~v~~~~---g~--~~~ad~vVgADG~~S~v 70 (315)
.+++++.++++.+++..+ +.+.|.+.+ |+ ++.+|+||-|-|....+
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 469999999999998754 446677755 44 57999999999987544
No 186
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=77.01 E-value=4.8 Score=36.41 Aligned_cols=45 Identities=13% Similarity=0.125 Sum_probs=34.2
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++++++|.+++.++....|.+ ++.++++|.||.|.|.....
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 240 HHIEILTNENVKAFKGNERVEAVET-DKGTYKADLVLVSVGVKPNT 284 (480)
T ss_dssp TTCEEECSCCEEEEEESSBEEEEEE-TTEEEECSEEEECSCEEESC
T ss_pred cCcEEEcCCEEEEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcCh
Confidence 4699999999999986532223444 45689999999999987643
No 187
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=76.67 E-value=5.5 Score=33.56 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=33.3
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec---CCC--EEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA---DGT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~---~g~--~~~ad~vVgADG~~ 67 (315)
.+++++.+++++++..++....|.++ +|+ ++.+|.||-|-|..
T Consensus 201 ~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp TTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 47999999999999875432345554 565 78999999999875
No 188
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=76.58 E-value=6.6 Score=32.99 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=37.5
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCe-eEEEec---CCC--EEeecEEEecCCCch
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHF-KLLHLA---DGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~-~~v~~~---~g~--~~~ad~vVgADG~~S 68 (315)
.+.+.|.+ .++++++++++.++..+++. ..|.+. +|+ ++.+|.||-|-|...
T Consensus 195 ~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 195 AYVQEIKK--RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HHHHHHHH--TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred HHHHHHhc--CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 34444543 47999999999999876542 245554 565 689999999998763
No 189
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=76.14 E-value=3.3 Score=34.93 Aligned_cols=43 Identities=16% Similarity=0.083 Sum_probs=35.0
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecC-----CCEEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLAD-----GTILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~-----g~~~~ad~vVgADG~~ 67 (315)
.+++++.++++.+++.+++...|.+++ +.++.+|+||-|-|..
T Consensus 202 ~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp SSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred CCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 479999999999998876656677765 3578999999999975
No 190
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=75.63 E-value=3.7 Score=37.56 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=33.1
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCC----EEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGT----ILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~----~~~ad~vVgADG~~ 67 (315)
.+++|+.|++|++++.++....+..+||+ ++.||+||-|-|..
T Consensus 285 ~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 285 TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred cceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 37999999999999654433445566764 69999999999964
No 191
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=75.25 E-value=5.3 Score=37.76 Aligned_cols=50 Identities=12% Similarity=-0.064 Sum_probs=37.4
Q ss_pred HHHHHHHHhhC--CCCcEEecceEEEEEeeC--CeeE-EEecCCCEEeecEEEec
Q 021261 14 KLLLETLAKEL--PSGTIRYSSQVVSIEESG--HFKL-LHLADGTILKTKVLIGC 63 (315)
Q Consensus 14 ~~L~~~L~~~~--~~~~i~~~~~v~~~~~~~--~~~~-v~~~~g~~~~ad~vVgA 63 (315)
..|-+.|.+.+ -+++|+++++|..|..++ ++++ |...+|++++||.||..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 35556665544 469999999999998876 4443 44577999999999983
No 192
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.95 E-value=2.4 Score=37.00 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=33.9
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
.+++++.+++|.+++ .+ .|.+++|+ +++|+||.|.|....+
T Consensus 196 ~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 196 TGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp TTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECC
T ss_pred CCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 369999999999997 23 36778887 9999999999987654
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=74.58 E-value=3.4 Score=36.52 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=35.4
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+++++.+++|+.++.+.. +|.+++|+++++|.||.|.|.....
T Consensus 73 ~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp SCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred CCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 489999999999976544 5677888899999999999986543
No 194
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=74.39 E-value=4.9 Score=35.91 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=38.0
Q ss_pred HHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 14 KLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 14 ~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
..+.+.|.+ .+++++.+++|.+++. + .|.+++|+++++|+||-|-|..-
T Consensus 192 ~~~~~~l~~--~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 192 QPILDELDK--REIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp HHHHHHHHH--TTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHhhc--cceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceec
Confidence 344455544 3799999999988753 2 47889999999999999999764
No 195
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=74.33 E-value=3.8 Score=36.69 Aligned_cols=42 Identities=17% Similarity=0.160 Sum_probs=34.3
Q ss_pred CcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 27 GTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 27 ~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
++++.++++.+++.++ ++.+.+.++.++++|.||-|-|....
T Consensus 204 v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEEC
T ss_pred cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccC
Confidence 8999999999997655 44444667889999999999998643
No 196
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.27 E-value=5.2 Score=35.81 Aligned_cols=45 Identities=13% Similarity=-0.031 Sum_probs=34.5
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC-CEEeecEEEecCCCchhhhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG-TILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g-~~~~ad~vVgADG~~S~vr~ 72 (315)
.+++++.++.+. .+.+.+.|...+| .++++|.||.|+|..+....
T Consensus 104 ~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~ 149 (455)
T 1ebd_A 104 NKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRPIELP 149 (455)
T ss_dssp TTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEECCBT
T ss_pred CCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCC
Confidence 358999888654 3456788888877 68999999999998765433
No 197
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=74.16 E-value=4.9 Score=37.97 Aligned_cols=56 Identities=11% Similarity=0.108 Sum_probs=40.2
Q ss_pred HHHHHHHhhC---CCC-cEEecceEEEEEeeCC---eeE-EE---ecCCC--EEeecEEEecCCCchhh
Q 021261 15 LLLETLAKEL---PSG-TIRYSSQVVSIEESGH---FKL-LH---LADGT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 15 ~L~~~L~~~~---~~~-~i~~~~~v~~~~~~~~---~~~-v~---~~~g~--~~~ad~vVgADG~~S~v 70 (315)
.+...|.+.+ +++ +|+.++.|+++..+++ .+. |. ..+|+ +++|+.||.|+|..|.+
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 3444554443 378 9999999999987765 432 22 25665 68999999999999864
No 198
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=73.89 E-value=2.1 Score=41.07 Aligned_cols=53 Identities=15% Similarity=0.086 Sum_probs=36.6
Q ss_pred HHHHHHHhhC-CCCcEEecceEE--EEEeeCCe-------eEEE-ecCCC--EEeecEEEecCCCc
Q 021261 15 LLLETLAKEL-PSGTIRYSSQVV--SIEESGHF-------KLLH-LADGT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~-~~~~i~~~~~v~--~~~~~~~~-------~~v~-~~~g~--~~~ad~vVgADG~~ 67 (315)
.|-+.|.+++ .+..|+++++|+ +|..++++ |+|+ ..+|+ +++||+||.|=-..
T Consensus 348 ~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~ 413 (721)
T 3ayj_A 348 EFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHD 413 (721)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHH
Confidence 3444444443 235688899999 99887554 8884 45676 89999999976543
No 199
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=72.98 E-value=5.4 Score=32.89 Aligned_cols=47 Identities=17% Similarity=0.097 Sum_probs=35.9
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
.+.+.|.+ .+++++. +++.+++.++ .|.+++|+++.+|+||-|-|..
T Consensus 179 ~~~~~l~~--~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 179 DQHALLAA--RGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp HHHHHHHH--TTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEE
T ss_pred HHHHHHHH--CCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcc
Confidence 34445544 3688885 8898886543 6888999999999999999875
No 200
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=71.48 E-value=10 Score=31.42 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=41.8
Q ss_pred eeeHHHHHHHHHhhCC--CCcEEecceEEEEEeeC--CeeEEEecCCCEEeecEEEecCCCch
Q 021261 10 CVRRKLLLETLAKELP--SGTIRYSSQVVSIEESG--HFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 10 ~i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~--~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
.+.+..+...|.+.+. +++++.+ +|+++ .++ +.+.|.+..+.++++|.||-|.|...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAP 118 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCC
Confidence 3566778877777653 4888888 89999 666 56775343333999999999999843
No 201
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=71.48 E-value=7.6 Score=32.34 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=36.9
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCee-EEEecC---CC--EEeecEEEecCCCc
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFK-LLHLAD---GT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~-~v~~~~---g~--~~~ad~vVgADG~~ 67 (315)
.+.+.|.+ ..+++++.++++.++..+++++ .|.+++ |+ ++.+|.||-|-|..
T Consensus 184 ~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 184 VLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp HHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 34444443 2479999999999998765543 466653 53 68899999998865
No 202
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.55 E-value=4 Score=36.25 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=36.0
Q ss_pred HHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecC----CCEEeecEEEecCCCch
Q 021261 13 RKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLAD----GTILKTKVLIGCDGVNS 68 (315)
Q Consensus 13 R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~----g~~~~ad~vVgADG~~S 68 (315)
+..+.+.|.+ .+++++++++|++++. +++ .+++ ++++.+|+||-|-|...
T Consensus 203 ~~~l~~~l~~--~GV~i~~~~~v~~v~~--~~v--~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 203 KRLVEDLFAE--RNIDWIANVAVKAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHH--TTCEEECSCEEEEECS--SEE--EEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHH--CCCEEEeCCEEEEEeC--CeE--EEEecCCCceEEeeeEEEECCCCcc
Confidence 4455555554 3799999999999954 343 4444 67899999999988653
No 203
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=69.99 E-value=8.6 Score=34.59 Aligned_cols=45 Identities=13% Similarity=0.006 Sum_probs=33.2
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecC-C-CEEeecEEEecCCCchhhhh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLAD-G-TILKTKVLIGCDGVNSIVAK 72 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~-g-~~~~ad~vVgADG~~S~vr~ 72 (315)
.+++++.++.+ .+ +.+.+.|...+ + .++++|.||.|+|.++.+..
T Consensus 110 ~gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~ 156 (474)
T 1zmd_A 110 NKVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEVTPFP 156 (474)
T ss_dssp TTCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT
T ss_pred CCCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC
Confidence 36889888654 23 45677888777 4 57999999999998765443
No 204
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=69.24 E-value=5 Score=35.71 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=31.5
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+++++.+ +|++++.+.. +|++++|+++++|+||-|-|...
T Consensus 70 gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred CcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeCCCCc
Confidence 3666655 6888876555 57889999999999999999753
No 205
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=69.00 E-value=14 Score=30.82 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=38.0
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeC-CeeEEEecCCCEEeecEEEecCCCch
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESG-HFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~-~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+.-.+|.+...+++. ....+....++.+...+ +..+|...+|+++++|.||-|.|...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 444555555554432 23334445566665544 44778899999999999999999853
No 206
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=68.77 E-value=8.8 Score=32.33 Aligned_cols=43 Identities=26% Similarity=0.245 Sum_probs=33.5
Q ss_pred CCCcEEecceEEEEEeeCC--ee-EEEec---CC--CEEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGH--FK-LLHLA---DG--TILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~--~~-~v~~~---~g--~~~~ad~vVgADG~~ 67 (315)
.+++++.++++.+++.+++ ++ .|.+. +| .++.+|+||-|-|..
T Consensus 208 ~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 208 PKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp TTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 4699999999999987764 33 35554 45 478999999999976
No 207
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=66.98 E-value=8.1 Score=34.36 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=36.5
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhhhhhhCC
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIVAKWLGF 76 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~vr~~l~~ 76 (315)
+++++. .+|+.++.+.. .|++++++++.+|+||.|.|..+..-..-|.
T Consensus 73 gv~~~~-~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~ 120 (437)
T 3sx6_A 73 GIHFIA-QSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAFENVPGS 120 (437)
T ss_dssp TCEEEC-SCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECGGGSTTC
T ss_pred CCEEEE-eEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCcccCCCC
Confidence 578874 68999876655 5778899999999999999997654433343
No 208
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.67 E-value=4.3 Score=38.71 Aligned_cols=52 Identities=10% Similarity=-0.065 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEe--c-CCCEEeecEEEecCCCch
Q 021261 13 RKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL--A-DGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 13 R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~--~-~g~~~~ad~vVgADG~~S 68 (315)
+..+.+.|.+ .+++++.+++|++++. +++.+.. . +++++.||.||-|-|...
T Consensus 570 ~~~l~~~l~~--~GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 570 VNRIQRRLIE--NGVARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp HHHHHHHHHH--TTCEEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred HHHHHHHHHH--CCCEEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCCCC
Confidence 3445555554 3799999999999974 3444443 2 345899999999999864
No 209
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.52 E-value=12 Score=33.18 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCc
Q 021261 13 RKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVN 67 (315)
Q Consensus 13 R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~ 67 (315)
+..+.+.|.++ +++++.+++|++++ ++++.+...+| +++.+|+||-|=|..
T Consensus 203 ~~~l~~~l~~~--GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 203 KRLVEDLFAER--NIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT--TCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHhC--CeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCC
Confidence 34455555553 79999999999985 45566665555 479999999999865
No 210
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=66.10 E-value=3.5 Score=37.46 Aligned_cols=43 Identities=21% Similarity=0.185 Sum_probs=34.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecC--CCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLAD--GTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~--g~~~~ad~vVgADG~~S~ 69 (315)
+++++.+++|+.++.+++.+.+.. + +.++++|.||.|.|....
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCCCcC
Confidence 588999999999987777665542 3 357999999999997653
No 211
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=65.89 E-value=11 Score=35.81 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=36.2
Q ss_pred HHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCch
Q 021261 16 LLETLAKELPSGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 16 L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S 68 (315)
+.+.|.+ .+++++.+++|.+++ ++++++. .+| +++.+|.||-|-|...
T Consensus 579 ~~~~l~~--~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 579 HRTTLLS--RGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHH--TTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHh--cCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 3444544 379999999999986 3455554 677 5799999999999864
No 212
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=64.72 E-value=5.4 Score=36.83 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCCcEEe--cceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 25 PSGTIRY--SSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~--~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
++++++. +..+..+.. ++ |.++||+++++|+||-|.|....
T Consensus 343 ~nV~lv~~~~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 343 PNVEAVAIKENPIREVTA--KG--VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp TTEEEEETTTSCEEEECS--SE--EEETTCCEEECSEEEECCCBSCS
T ss_pred CCEEEEeCCCCCccEEec--Ce--EEcCCCCEEECCEEEECCccCcc
Confidence 3566665 677777754 33 77899999999999999998754
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=63.77 E-value=8.5 Score=33.90 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=34.8
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
+++++.+++|+.++.+.. .|.+.+|+++.+|.||-|.|..
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 689999999999976654 5778899999999999999976
No 214
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=63.15 E-value=6.7 Score=35.62 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=34.6
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+++++.+++|++++.+.. +|.+.+|+++.+|.||-|.|...
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 478999999999987654 57778899999999999999764
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=59.83 E-value=13 Score=33.13 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=34.8
Q ss_pred CCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S~ 69 (315)
+++++.++++..++.+++.+.+.. .+|+ ++++|.||.|.|....
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 688999999999988777666654 3465 4899999999997643
No 216
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=59.48 E-value=8.2 Score=34.48 Aligned_cols=44 Identities=11% Similarity=0.087 Sum_probs=34.3
Q ss_pred CCcEEecceEEEEEeeCCeeEEEe-cC--CCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHL-AD--GTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~-~~--g~~~~ad~vVgADG~~S~ 69 (315)
+++++.++++..++.++..+.+.. .+ +.++++|.||.|.|....
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 688999999999987777666654 22 357999999999997644
No 217
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=54.95 E-value=17 Score=34.47 Aligned_cols=58 Identities=14% Similarity=0.032 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhC----CCCcEEecceEEEEEeeCC---e---eEEE-ecCCC--EEeecEEEecCCCchhh
Q 021261 13 RKLLLETLAKEL----PSGTIRYSSQVVSIEESGH---F---KLLH-LADGT--ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 13 R~~L~~~L~~~~----~~~~i~~~~~v~~~~~~~~---~---~~v~-~~~g~--~~~ad~vVgADG~~S~v 70 (315)
...+...|.+++ ++++|+.++.++++..+++ . +.+. ..+|+ .++|+.||.|.|-.+.+
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 344555555543 3799999999999987765 4 2222 24554 68999999999998854
No 218
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=54.81 E-value=30 Score=31.54 Aligned_cols=46 Identities=4% Similarity=-0.113 Sum_probs=33.3
Q ss_pred CCCcEEecceEEEEEeeC----CeeEEEe--cCCC---EEeecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEESG----HFKLLHL--ADGT---ILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~----~~~~v~~--~~g~---~~~ad~vVgADG~~S~v 70 (315)
.+++++.++++.+++..+ +++.|.+ .++. ++.+|+||-|-|....+
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 469999999988887643 3455544 4552 56899999999986543
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.75 E-value=10 Score=32.81 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=32.3
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+++++.+++|+.++.+.. +|. .+|+++++|.||-|.|...
T Consensus 74 ~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCEEE
T ss_pred CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCCCC
Confidence 578999999999876543 455 6788999999999999753
No 220
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=54.49 E-value=9.9 Score=32.19 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=32.3
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEec---CC--CEEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLA---DG--TILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~---~g--~~~~ad~vVgADG~~ 67 (315)
.+++++.++++.+++.+++...|.++ +| .++.+|.||-|-|..
T Consensus 204 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 204 DKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp TTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred CCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 47999999999999876532334443 45 478999999999875
No 221
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.49 E-value=14 Score=32.76 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=32.2
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++++. .+++.++.+.. .|.+++++++.+|.||.|.|....
T Consensus 70 gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 70 NIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp TEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCcccc
Confidence 467776 48888876554 577888999999999999998743
No 222
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=54.44 E-value=11 Score=34.69 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=29.4
Q ss_pred CCcEEe--cceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 26 SGTIRY--SSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~--~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+++++. +..|..+.. ++ |.+++| ++++|+||-|.|...
T Consensus 352 nV~lv~~~~~~I~~it~--~g--v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTP--EG--IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCCBS
T ss_pred CEEEEecCCCCceEEcc--Ce--EEeCCC-eeecCEEEECCcccc
Confidence 466665 677777754 33 677899 999999999999974
No 223
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=53.43 E-value=18 Score=32.12 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=35.2
Q ss_pred HHHHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEe--cC-----CCEEeecEEEecCCCc
Q 021261 13 RKLLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL--AD-----GTILKTKVLIGCDGVN 67 (315)
Q Consensus 13 R~~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~--~~-----g~~~~ad~vVgADG~~ 67 (315)
+..+.+.|.+ .+++++.+++|++++. +++++.. .+ +.++.+|+||-|-|..
T Consensus 211 ~~~~~~~l~~--~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 211 KGILTKGLKE--EGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHH--TTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHH--CCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 4445555554 3799999999999864 4444432 23 4578999999998843
No 224
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=52.25 E-value=15 Score=32.33 Aligned_cols=41 Identities=24% Similarity=0.440 Sum_probs=34.5
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
.+++++.+++|+.++.+.. .|.+.+|+++.+|.||-|.|..
T Consensus 78 ~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 78 KAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp TTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEE
T ss_pred CCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCc
Confidence 3588999999999976554 5777899999999999999964
No 225
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=51.72 E-value=29 Score=30.95 Aligned_cols=42 Identities=21% Similarity=0.121 Sum_probs=32.3
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S~v 70 (315)
+++++.++.+. + +.+.+.|...+| .++++|.||.|.|.....
T Consensus 107 ~v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~ 150 (468)
T 2qae_A 107 KVTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATGSEPTE 150 (468)
T ss_dssp TCEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred CCEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCCCCcCC
Confidence 58888887553 3 456778888888 689999999999986543
No 226
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=50.31 E-value=22 Score=31.09 Aligned_cols=38 Identities=26% Similarity=0.371 Sum_probs=30.0
Q ss_pred CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHh
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALK 232 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~ 232 (315)
..+|..+||+++.-.|-. ...|...+..++..|...+.
T Consensus 299 ~~~vfa~GD~~~~~~~~~---~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPKL---GYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp CTTEEECGGGBTTCCSCC---HHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeehhccCCCCcH---HHHHHHHHHHHHHHHHHHhc
Confidence 469999999998644433 35789999999999988873
No 227
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=48.25 E-value=31 Score=28.47 Aligned_cols=57 Identities=18% Similarity=0.180 Sum_probs=39.7
Q ss_pred eeHHHHHHHHHhhCC--CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 11 VRRKLLLETLAKELP--SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 11 i~R~~L~~~L~~~~~--~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
++..+|...+.+.+. +.++. ...+.......+...+...++.++++|.||-|.|...
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 455666666665542 34444 4556666666666667778889999999999999754
No 228
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=47.36 E-value=56 Score=30.23 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=33.6
Q ss_pred CCCcEEecceEEEEEee------C---CeeEEE--ecCCCEEe--ecEEEecCCCchhh
Q 021261 25 PSGTIRYSSQVVSIEES------G---HFKLLH--LADGTILK--TKVLIGCDGVNSIV 70 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~------~---~~~~v~--~~~g~~~~--ad~vVgADG~~S~v 70 (315)
.++++++++++.+++.. + +++.+. +.+|+++. +|.||-|-|....+
T Consensus 339 ~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 339 HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 47999999998888642 2 344444 46777655 99999999987544
No 229
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=46.08 E-value=25 Score=31.24 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=30.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchhh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSIV 70 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~v 70 (315)
+++++.++.+. .+++.+.|.. +|.++++|.||.|.|.....
T Consensus 103 ~v~~~~g~~~~---i~~~~~~v~~-~g~~~~~d~lviAtG~~p~~ 143 (455)
T 2yqu_A 103 GIARHQGTARF---LSERKVLVEE-TGEELEARYILIATGSAPLI 143 (455)
T ss_dssp TCEEEESCEEE---SSSSEEEETT-TCCEEEEEEEEECCCEEECC
T ss_pred CCEEEEeEEEE---ecCCeEEEee-CCEEEEecEEEECCCCCCCC
Confidence 58888887542 3445566655 67899999999999986543
No 230
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=45.63 E-value=16 Score=32.52 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=34.7
Q ss_pred CCcEEecceEEEEEeeCCeeEEEec-CCCEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLA-DGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~-~g~~~~ad~vVgADG~~S 68 (315)
+++++.+++|++++.+...+.+... ++.++++|.||-|.|...
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 5788899999999888877766532 446899999999999853
No 231
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=43.85 E-value=42 Score=20.89 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=24.4
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCE
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTI 54 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~ 54 (315)
++....+..+++++.....-.+|.|++|++
T Consensus 21 ~Gd~~yYparI~Si~s~~~~Y~V~fKdgT~ 50 (66)
T 2l8d_A 21 PGSVLYYEVQVTSYDDASHLYTVKYKDGTE 50 (66)
T ss_dssp TTSSCEEEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCccceEEEEEEeccCCceEEEEecCCCE
Confidence 677888999999999555568899999863
No 232
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=43.78 E-value=30 Score=30.95 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=34.1
Q ss_pred CCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S 68 (315)
+++++.+++|++++.+...+.+.. .+|+ ++++|.||-|.|...
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCc
Confidence 588899999999988777766654 3465 899999999999753
No 233
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=42.84 E-value=35 Score=30.99 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=31.0
Q ss_pred CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHh
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALK 232 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~ 232 (315)
..+|+.+||+|..-.|-++| .|++.|..+|+.|.....
T Consensus 364 ~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~~~ 401 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKMAQ 401 (502)
T ss_dssp CSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHHhc
Confidence 46999999999887776764 688999999999877544
No 234
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=42.78 E-value=23 Score=32.52 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=34.6
Q ss_pred CCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S 68 (315)
+++++.+++|++++.+...+.+.. .+|+ ++++|.||-|.|...
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCC
Confidence 578999999999988777766654 3354 789999999999853
No 235
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=42.55 E-value=33 Score=29.73 Aligned_cols=41 Identities=12% Similarity=0.205 Sum_probs=32.2
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++++.+ +|++++.+.. .|.+.+|.++.+|+||-|-|....
T Consensus 69 gv~~i~~-~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 69 GIQVVHD-SALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp TCEEECS-CEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEEe-EEEEEEccCc--EEEecccceeecceeeeccCCccc
Confidence 5777654 6888866554 577899999999999999998654
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=42.55 E-value=46 Score=30.30 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=33.0
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEecC---CC--EEeecEEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLAD---GT--ILKTKVLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~~---g~--~~~ad~vVgADG~~ 67 (315)
++++++.+++++++..+++++ .|.+.+ |+ ++.+|.||-|-|..
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 579999999999998765554 466653 54 68899999988854
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=42.50 E-value=32 Score=31.80 Aligned_cols=43 Identities=23% Similarity=0.169 Sum_probs=35.2
Q ss_pred CCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S 68 (315)
+++++++++|++++.++..+.+.. .+|+ ++++|.||-|.|...
T Consensus 107 gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 107 NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 588999999999998887776654 4566 789999999999743
No 238
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=41.49 E-value=37 Score=31.78 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=36.9
Q ss_pred CCCcEEecceEEEEEeeCC--e-eEEEec---CCC--EEeecEEEecCCCchhhhhhh
Q 021261 25 PSGTIRYSSQVVSIEESGH--F-KLLHLA---DGT--ILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~--~-~~v~~~---~g~--~~~ad~vVgADG~~S~vr~~l 74 (315)
++++|++++.|+++..+++ . ..|.+. +|+ +++||.||.|-|.....+-.+
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 3689999999999988643 2 334443 454 789999999999877665443
No 239
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=40.50 E-value=24 Score=33.82 Aligned_cols=50 Identities=16% Similarity=0.044 Sum_probs=33.1
Q ss_pred HHHHHHHhhCCCCcEEecceEEEEEeeCCeeEEEe--cCC-CE------------------EeecEEEecCCCch
Q 021261 15 LLLETLAKELPSGTIRYSSQVVSIEESGHFKLLHL--ADG-TI------------------LKTKVLIGCDGVNS 68 (315)
Q Consensus 15 ~L~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~~--~~g-~~------------------~~ad~vVgADG~~S 68 (315)
.+.+.|.+ .++++++++++.+++. +++.+.. .++ ++ +.+|.||-|-|...
T Consensus 576 ~~~~~l~~--~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p 646 (729)
T 1o94_A 576 NMMRRLHE--LHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHS 646 (729)
T ss_dssp HHHHHHHH--TTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEE
T ss_pred HHHHHHHh--CCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCC
Confidence 34444443 4799999999999964 4444443 233 22 78888888888654
No 240
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=39.83 E-value=42 Score=30.26 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=32.1
Q ss_pred CCCcEEecceEEEEEee----CCeeEEEecCCC--EEeecEEEecCCCchh
Q 021261 25 PSGTIRYSSQVVSIEES----GHFKLLHLADGT--ILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~----~~~~~v~~~~g~--~~~ad~vVgADG~~S~ 69 (315)
.+++++.++ +..++.. ++.+.|...+|+ ++++|.||.|.|....
T Consensus 108 ~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 108 MGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp TTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred CCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 368898886 5555442 245777777787 8999999999997643
No 241
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=38.95 E-value=36 Score=25.47 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=29.7
Q ss_pred CCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 191 SRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 191 ~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
...+|..+||.+....| -...|+.++..++..+...+.+
T Consensus 134 ~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp SSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 34689999999987554 3467888899888888775553
No 242
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=38.20 E-value=24 Score=32.53 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=28.0
Q ss_pred CCcEE--ecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 26 SGTIR--YSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~--~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++++ ....+..+.. ++ |.+++| ++++|+||-|.|....
T Consensus 357 ~V~lvd~~~~~I~~it~--~g--v~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 357 NVELVDLRSTPIVGMDE--TG--IVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCEEES
T ss_pred CEEEEeCCCCCceEEeC--Cc--EEeCCC-ceecCEEEECCccccc
Confidence 45554 1466666654 33 677899 9999999999998754
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=38.17 E-value=36 Score=30.14 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=33.0
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCC-CEEeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADG-TILKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g-~~~~ad~vVgADG~~S 68 (315)
.+++++.+++|++++. +...|...++ .++++|.||-|.|...
T Consensus 72 ~gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp TTCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCCEEE
T ss_pred cCcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCCCCC
Confidence 4689999999999854 3456677777 4899999999999653
No 244
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=36.23 E-value=21 Score=30.91 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=31.7
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
+++++.++++..++.++.. |.+. +.++++|.||.|.|....
T Consensus 74 ~v~~~~~~~v~~i~~~~~~--v~~~-~~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQR--IWIG-EEEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp TCEEECSCCCCEEEGGGTE--EEET-TEEEECSEEEECCCEEEC
T ss_pred CcEEEeCCEEEEEECCCCE--EEEC-CcEEECCEEEEeCCCCcC
Confidence 5889999999998776554 4444 357999999999998653
No 245
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=35.70 E-value=36 Score=30.73 Aligned_cols=57 Identities=14% Similarity=0.255 Sum_probs=41.0
Q ss_pred eHHHHHHHHHhhC-CCCcEEecceEEEEEeeCCeeEEEe-cCCC--EEeecEEEecCCCch
Q 021261 12 RRKLLLETLAKEL-PSGTIRYSSQVVSIEESGHFKLLHL-ADGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 12 ~R~~L~~~L~~~~-~~~~i~~~~~v~~~~~~~~~~~v~~-~~g~--~~~ad~vVgADG~~S 68 (315)
...++...+.+.+ .+++++.+++|.++..++..+.+.. .+++ ++++|.||-|.|...
T Consensus 159 ~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 3455666666654 3588899999999887766554443 4454 789999999999764
No 246
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=35.49 E-value=62 Score=28.74 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=30.0
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCC--CEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADG--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g--~~~~ad~vVgADG~~S 68 (315)
+++++.+. +..+ +.+.+.|...+| +++++|.||-|.|...
T Consensus 109 ~v~~~~g~-~~~~--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 109 AITVVHGE-ARFK--DDQSLTVRLNEGGERVVMFDRCLVATGASP 150 (467)
T ss_dssp TEEEEEEE-EEEE--ETTEEEEEETTSSEEEEECSEEEECCCEEE
T ss_pred CeEEEEEE-EEEc--cCCEEEEEeCCCceEEEEeCEEEEeCCCCC
Confidence 67777764 5444 355678888888 6899999999999653
No 247
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=35.18 E-value=55 Score=28.95 Aligned_cols=43 Identities=14% Similarity=0.076 Sum_probs=33.5
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecC-C--CEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLAD-G--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~-g--~~~~ad~vVgADG~~S 68 (315)
+++++.+++|++++.+...+.+.... + .++.+|.||-|.|...
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 57899999999998877766655433 2 3689999999999864
No 248
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=34.97 E-value=34 Score=31.28 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=27.3
Q ss_pred CcEE--ecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCch
Q 021261 27 GTIR--YSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNS 68 (315)
Q Consensus 27 ~~i~--~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S 68 (315)
+++. .+..|.++. +++ |.++| +++++|+||-|.|...
T Consensus 353 v~lv~~~~~~i~~i~--~~g--v~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 353 VHLVDTLSAPIETIT--PRG--VRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp EEEEETTTSCEEEEC--SSE--EEESS-CEEECSEEEECCCCCC
T ss_pred EEEEecCCCCceEEc--CCe--EEeCC-eEEecCEEEEcCCccc
Confidence 4554 256677764 333 67788 8999999999999875
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=34.97 E-value=83 Score=27.94 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=30.7
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCE--EeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTI--LKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~--~~ad~vVgADG~~S 68 (315)
++++..+ ++..++ .+.+.|..++|++ +++|.||-|.|...
T Consensus 103 ~v~~~~g-~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 103 TLTFYKG-YVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp TEEEESE-EEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred CCEEEEe-EEEEec--CCeEEEEcCCCcEEEEecCEEEECCCCCc
Confidence 4777776 555553 5677888888888 99999999999743
No 250
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=34.35 E-value=29 Score=31.03 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=29.4
Q ss_pred CCcEEecceEEEEEeeCCeeEEEec----------------CC--CEEeecEEEecCCCch
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLA----------------DG--TILKTKVLIGCDGVNS 68 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~----------------~g--~~~~ad~vVgADG~~S 68 (315)
++++++++++.++..++.-..|.++ +| +++.||+||-|=|..+
T Consensus 266 gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 266 RMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred eEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 4899999999999765321124333 34 3688888888888764
No 251
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=33.98 E-value=66 Score=20.27 Aligned_cols=37 Identities=16% Similarity=-0.012 Sum_probs=27.0
Q ss_pred CCC-CcEEecceEEEEEeeC-C--eeEEEecCCCEEeecEE
Q 021261 24 LPS-GTIRYSSQVVSIEESG-H--FKLLHLADGTILKTKVL 60 (315)
Q Consensus 24 ~~~-~~i~~~~~v~~~~~~~-~--~~~v~~~~g~~~~ad~v 60 (315)
+|. +++..+.+.+.+..+- + .|+|.+.||+...|+.+
T Consensus 8 APaCV~~~qsWRYT~V~N~Cs~tvsVtV~Y~dG~~~PCrv~ 48 (74)
T 1ok0_A 8 APSCVTLYQSWRYSQADNGCAETVTVKVVYEDDTEGLCYAV 48 (74)
T ss_dssp CCTTEEEEECSSEEEEEECSSSCEEEEEEETTSCBCCCEEE
T ss_pred CcccEEEecceEEEeecCCCcccEEEEEEEeCCCcceeEEe
Confidence 355 8899999999998763 3 37788899986655443
No 252
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=33.26 E-value=33 Score=30.70 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=24.5
Q ss_pred ceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 33 SQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 33 ~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
..|.+++ ++ .|.+++|+++.+|.||-|-|..
T Consensus 245 ~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 245 PNLVRVD--TE--NAYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp SCEEEEC--SS--EEEETTSCEEECSEEEECCCBC
T ss_pred CCeEEEe--CC--EEEECCCCEEeCCEEEECCCCC
Confidence 5666663 33 3778999999999999999975
No 253
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=33.19 E-value=61 Score=28.96 Aligned_cols=41 Identities=7% Similarity=0.017 Sum_probs=29.9
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCC--EEeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGT--ILKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~--~~~ad~vVgADG~~S 68 (315)
.+++++.++ +..+ +.+.+.|...+|+ ++++|.||-|.|...
T Consensus 118 ~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 118 EKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp TTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred CCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 357787774 4443 4455777777776 899999999999754
No 254
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=32.68 E-value=46 Score=28.91 Aligned_cols=39 Identities=28% Similarity=0.370 Sum_probs=32.5
Q ss_pred CCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 26 SGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 26 ~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
+++++. ++|+.++.+.. .|.+.+|+++.+|.||-|.|..
T Consensus 71 ~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp TEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEE
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCC
Confidence 577888 89999876655 5778899999999999999974
No 255
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=31.83 E-value=58 Score=28.97 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=27.7
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCchh
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~S~ 69 (315)
.+++++.++.+. + +...+ .+. |+++++|.||.|.|....
T Consensus 106 ~gv~~~~g~~~~-~--~~~~v--~v~-g~~~~~d~lViATGs~p~ 144 (464)
T 2eq6_A 106 NGVELLRGFARL-V--GPKEV--EVG-GERYGAKSLILATGSEPL 144 (464)
T ss_dssp TTCEEEESCEEE-E--ETTEE--EET-TEEEEEEEEEECCCEEEC
T ss_pred CCCEEEeeeEEE-c--cCCEE--EEc-cEEEEeCEEEEcCCCCCC
Confidence 368898887553 3 34444 444 678999999999998654
No 256
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=31.26 E-value=78 Score=19.76 Aligned_cols=30 Identities=20% Similarity=0.470 Sum_probs=23.9
Q ss_pred CCCcEEecceEEEEEeeCCeeEEEecCCCE
Q 021261 25 PSGTIRYSSQVVSIEESGHFKLLHLADGTI 54 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~~v~~~~g~~ 54 (315)
++....+..+++++.....-.+|.|++|++
T Consensus 24 ~Gd~~yYparItSits~~~~Y~VkfKdgT~ 53 (68)
T 2dig_A 24 PGSSLYYEVEILSHDSTSQLYTVKYKDGTE 53 (68)
T ss_dssp TTTCCEEEEEEEEEETTTTEEEEECTTSCE
T ss_pred cCCccceEEEEEEeccCCceEEEEecCCCE
Confidence 567788999999999555557899999863
No 257
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=30.82 E-value=46 Score=29.45 Aligned_cols=39 Identities=13% Similarity=0.296 Sum_probs=28.5
Q ss_pred cEEecceEEEEEeeCCeeEEEecCCCE-EeecEEEecCCCch
Q 021261 28 TIRYSSQVVSIEESGHFKLLHLADGTI-LKTKVLIGCDGVNS 68 (315)
Q Consensus 28 ~i~~~~~v~~~~~~~~~~~v~~~~g~~-~~ad~vVgADG~~S 68 (315)
.|..+..|.+++.+++ .|.++||++ +.+|.||-|-|...
T Consensus 253 ~i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~~ 292 (447)
T 2gv8_A 253 SLQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYLY 292 (447)
T ss_dssp SEEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBCC
T ss_pred CeEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCCc
Confidence 3445667777754333 578899986 78999999999863
No 258
>3nk4_C ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_C*
Probab=29.37 E-value=27 Score=17.20 Aligned_cols=11 Identities=36% Similarity=0.676 Sum_probs=7.2
Q ss_pred CCEEeecEEEe
Q 021261 52 GTILKTKVLIG 62 (315)
Q Consensus 52 g~~~~ad~vVg 62 (315)
|.++.||+|||
T Consensus 7 gkevaadvvig 17 (30)
T 3nk4_C 7 GKEVAADVVIG 17 (30)
T ss_dssp --CEEEEEEEE
T ss_pred ccceecceEEe
Confidence 56777888887
No 259
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=29.20 E-value=59 Score=26.83 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=28.0
Q ss_pred CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
-.+|..+||.+..-. .-+..|+.++..+|..+.+++..
T Consensus 270 ~pgIyA~GDv~~~~~----~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGL----RQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp STTEEECSTTBSCSC----CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcc----hHHHHHHHHHHHHHHHHHHHHHh
Confidence 358999999875321 12467889999999888887664
No 260
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=29.17 E-value=66 Score=26.39 Aligned_cols=38 Identities=21% Similarity=0.185 Sum_probs=26.7
Q ss_pred CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
-.+|..+||.++...- =+..|+.++..+|..+.++|+.
T Consensus 276 ~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 276 VDGVFACGDVCDRVYR----QAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp STTEEECSTTTCSSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeccCCcch----HHHHHHHHHHHHHHHHHHHHhc
Confidence 4589999999874221 1356788888888877776653
No 261
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=29.14 E-value=62 Score=29.25 Aligned_cols=45 Identities=20% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCcEEecceEEEEEeeC-C-e-eEEEec--CC-----CEEeecEEEecCCCchh
Q 021261 25 PSGTIRYSSQVVSIEESG-H-F-KLLHLA--DG-----TILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~-~-~-~~v~~~--~g-----~~~~ad~vVgADG~~S~ 69 (315)
++++|+.+++|+++..++ + . +.|.+. +| .+++|+-||-|-|....
T Consensus 235 ~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 235 GKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp TSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred CCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 569999999999999875 3 3 445553 56 36889888888887633
No 262
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=29.00 E-value=46 Score=26.30 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=25.5
Q ss_pred CCCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHH
Q 021261 191 SRGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEA 230 (315)
Q Consensus 191 ~~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~ 230 (315)
.-.++..+||+| ... -...+++++..+|+.|.+.
T Consensus 197 ~~p~iya~G~~a--~~g----~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 197 RLEGLYAVGLCV--REG----DYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TSBSEEECGGGT--SCC----CHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeecc--cCc----cHHHHHHHHHHHHHHHHhh
Confidence 467999999999 322 2235689999999888764
No 263
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=28.69 E-value=45 Score=29.59 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=27.3
Q ss_pred CCcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHH
Q 021261 192 RGSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINE 229 (315)
Q Consensus 192 ~~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~ 229 (315)
.+++.++||. +.|.|+..++.++..+|+.|..
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 4689999988 4688999999999999988765
No 264
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=28.37 E-value=23 Score=29.76 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=26.1
Q ss_pred EEecceEEEEEeeCCeeEEEecCCCEEeecEEEecCCCc
Q 021261 29 IRYSSQVVSIEESGHFKLLHLADGTILKTKVLIGCDGVN 67 (315)
Q Consensus 29 i~~~~~v~~~~~~~~~~~v~~~~g~~~~ad~vVgADG~~ 67 (315)
+..+..+.+++. + .|.+++|+++.+|+||-|-|..
T Consensus 250 i~~~~~v~~~~~--~--~v~~~~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 250 LAAVPPPARFSP--T--GMQWADGTERAFDAVIWCTGFR 284 (357)
T ss_dssp CCEECCCSEEET--T--EEECTTSCEEECSEEEECCCBC
T ss_pred eEEecCcceEeC--C--eeEECCCCEecCCEEEECCCcC
Confidence 445555555543 2 3788999999999999999985
No 265
>2ker_A Parvulustat, alpha-amylase inhibitor Z-2685; parvulustat (Z-2685), hydrolase inhibitor; NMR {Streptomyces parvulus}
Probab=27.85 E-value=96 Score=19.76 Aligned_cols=37 Identities=8% Similarity=0.048 Sum_probs=26.9
Q ss_pred CCC-CcEEecceEEEEEeeC-C--eeEEEecCCCEEeecEE
Q 021261 24 LPS-GTIRYSSQVVSIEESG-H--FKLLHLADGTILKTKVL 60 (315)
Q Consensus 24 ~~~-~~i~~~~~v~~~~~~~-~--~~~v~~~~g~~~~ad~v 60 (315)
+|. +++..+++.+.+..+- + .++|.+.||+...|+.+
T Consensus 6 APaCV~~~qsWRYT~v~N~Cs~tvsVtV~Y~dG~~~PCrv~ 46 (78)
T 2ker_A 6 VAECVEYFQSWRYTDVHNGCADAVSVTVEYTHGQWAPCRVI 46 (78)
T ss_dssp SSSSCEEEECSSEEEEECCSSSCEEEEEEESSCCSCCCEEE
T ss_pred CcceEEEecceEEEeeeCCCcccEEEEEEEeCCCcceeEEe
Confidence 355 8999999999998763 3 37788888876655543
No 266
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=27.30 E-value=60 Score=29.73 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=32.6
Q ss_pred CCCcEEecceEEEEEeeC-Ce-eEEEecC---CC--EEeec-EEEecCCCc
Q 021261 25 PSGTIRYSSQVVSIEESG-HF-KLLHLAD---GT--ILKTK-VLIGCDGVN 67 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~-~~-~~v~~~~---g~--~~~ad-~vVgADG~~ 67 (315)
++++|+.++.|+.+..++ +. +.|.+.+ |+ +++|+ -||-|-|..
T Consensus 222 ~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 222 ENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp TTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 569999999999999876 44 3455533 53 78998 888888873
No 267
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=26.38 E-value=62 Score=32.11 Aligned_cols=45 Identities=22% Similarity=0.246 Sum_probs=34.2
Q ss_pred CCCcEEecceEEEEEee-CCee-EEEecC-------C--CEEeecEEEecCCCchh
Q 021261 25 PSGTIRYSSQVVSIEES-GHFK-LLHLAD-------G--TILKTKVLIGCDGVNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~-~~~~-~v~~~~-------g--~~~~ad~vVgADG~~S~ 69 (315)
.+++|+.++++++++.+ ++++ .|.+++ | +++.+|.||-|-|....
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC
T ss_pred CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC
Confidence 47999999999999874 3432 455553 4 58999999999997654
No 268
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=24.10 E-value=56 Score=29.52 Aligned_cols=48 Identities=17% Similarity=0.140 Sum_probs=31.1
Q ss_pred CcEEecceEEEEEeeCC--eeEE------------EecCCCEEeecEEEecCCCchhhhhhh
Q 021261 27 GTIRYSSQVVSIEESGH--FKLL------------HLADGTILKTKVLIGCDGVNSIVAKWL 74 (315)
Q Consensus 27 ~~i~~~~~v~~~~~~~~--~~~v------------~~~~g~~~~ad~vVgADG~~S~vr~~l 74 (315)
..+..+..+.+++.... .++| .+.+|+++++|.||-|.|.+...-..|
T Consensus 354 ~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L 415 (501)
T 4b63_A 354 HRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERL 415 (501)
T ss_dssp SEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHH
T ss_pred eeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchh
Confidence 35666777777765432 2333 345678999999999999987655444
No 269
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=24.01 E-value=91 Score=28.38 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=33.7
Q ss_pred CCCcEEecceEEEEEeeCCee-EEEecC---CC--EE---eecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESGHFK-LLHLAD---GT--IL---KTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~~~~-~v~~~~---g~--~~---~ad~vVgADG~~S 68 (315)
++++|+.++.|+++..+++.+ .|.+.+ |+ ++ .++-||-|-|...
T Consensus 209 ~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 209 PNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp TTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred CCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 579999999999999876653 466654 53 33 7899999999854
No 270
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=23.64 E-value=80 Score=28.13 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=25.8
Q ss_pred CcEEEeccCCCCCCCCCccc-hhhhhhHHHHHHHHHHHHHhc
Q 021261 193 GSVCVAGDALHPMTPDIGQG-GCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 193 ~~v~LiGDAAh~~~P~~G~G-~~~al~da~~La~~l~~~~~~ 233 (315)
.+|..+||++.. | .| +..|+.++..++..|...+..
T Consensus 360 p~vya~Gd~~~g--~---~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 360 PGLYCSGWVKRG--P---TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTEEECTHHHHC--T---TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcC--C---CccHHHHHHHHHHHHHHHHHHHHh
Confidence 378888888843 2 23 457888999888888776654
No 271
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=22.57 E-value=1e+02 Score=27.82 Aligned_cols=44 Identities=11% Similarity=0.152 Sum_probs=32.9
Q ss_pred CCCcEEecceEEEEEeeC-C-e-eEEEec--CC-----CEEeecEEEecCCCch
Q 021261 25 PSGTIRYSSQVVSIEESG-H-F-KLLHLA--DG-----TILKTKVLIGCDGVNS 68 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~~-~-~-~~v~~~--~g-----~~~~ad~vVgADG~~S 68 (315)
++++|+.+++|+++..++ + . +.|.+. +| .+++|+-||-|-|...
T Consensus 240 ~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 240 GKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp TCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHH
T ss_pred CCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccC
Confidence 569999999999999875 3 3 345553 45 2688988888888763
No 272
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=22.33 E-value=1.4e+02 Score=27.70 Aligned_cols=45 Identities=16% Similarity=0.047 Sum_probs=30.8
Q ss_pred CCCcEEecceEEEEEee----CCe-eEEEec--CCC--EEeec-EEEecCC-Cchh
Q 021261 25 PSGTIRYSSQVVSIEES----GHF-KLLHLA--DGT--ILKTK-VLIGCDG-VNSI 69 (315)
Q Consensus 25 ~~~~i~~~~~v~~~~~~----~~~-~~v~~~--~g~--~~~ad-~vVgADG-~~S~ 69 (315)
++.+|+.+++|+.|..+ +.. +-|++. +|. +++|+ =||-|-| .+|+
T Consensus 240 ~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SP 295 (583)
T 3qvp_A 240 PNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSP 295 (583)
T ss_dssp TTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHH
T ss_pred CCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCH
Confidence 56999999999999987 333 345554 564 67785 4666666 4443
No 273
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=20.88 E-value=83 Score=28.32 Aligned_cols=38 Identities=26% Similarity=0.175 Sum_probs=30.8
Q ss_pred CcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 193 GSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 193 ~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
+++.++||+.+...| | ++.-|++++...|+.|.+.+..
T Consensus 419 ~~L~fAG~~t~~~~~--g-~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 419 DRIYFAGTETATHWS--G-YMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp TTEEECSGGGCSSST--T-SHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEeehhhcCcCc--E-EhHHHHHHHHHHHHHHHHHHhc
Confidence 799999999876544 3 7899999999999988876643
No 274
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=20.88 E-value=83 Score=27.89 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.9
Q ss_pred CcEEEeccCCCCCCCCCccchhhhhhHHHHHHHHHHHHHhc
Q 021261 193 GSVCVAGDALHPMTPDIGQGGCAALEDGIVLARCINEALKT 233 (315)
Q Consensus 193 ~~v~LiGDAAh~~~P~~G~G~~~al~da~~La~~l~~~~~~ 233 (315)
+++.++||+.|. ..+.++.-|++++...|+.|.+.+..
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 699999999765 34568999999999999888776654
No 275
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=20.43 E-value=1.3e+02 Score=19.07 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=17.1
Q ss_pred CCeeEEEecCCCEEeecEEEecCCC
Q 021261 42 GHFKLLHLADGTILKTKVLIGCDGV 66 (315)
Q Consensus 42 ~~~~~v~~~~g~~~~ad~vVgADG~ 66 (315)
+..++|++++|.+++. .|+++|+.
T Consensus 15 g~~V~VeLk~g~~~~G-~L~~~D~~ 38 (75)
T 1d3b_A 15 GHIVTCETNTGEVYRG-KLIEAEDN 38 (75)
T ss_dssp TSEEEEEETTSCEEEE-EEEEECTT
T ss_pred CCEEEEEECCCcEEEE-EEEEEccc
Confidence 3457888998888776 45677764
Done!