Query 021266
Match_columns 315
No_of_seqs 142 out of 1538
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:54:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021266.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021266hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 1.7E-37 3.8E-42 277.3 32.7 295 14-311 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 9.7E-38 2.1E-42 275.0 30.5 292 17-314 2-298 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.8E-36 3.9E-41 260.6 19.5 298 14-314 14-312 (316)
4 PLN00411 nodulin MtN21 family 100.0 1.4E-30 3E-35 232.0 27.8 288 17-313 13-332 (358)
5 PF08449 UAA: UAA transporter 100.0 1.5E-28 3.3E-33 216.2 27.5 281 29-315 12-303 (303)
6 PRK11689 aromatic amino acid e 100.0 1.2E-27 2.6E-32 209.9 26.7 268 15-310 6-288 (295)
7 PRK11272 putative DMT superfam 100.0 1E-26 2.2E-31 203.7 29.7 271 20-313 15-289 (292)
8 KOG1444 Nucleotide-sugar trans 100.0 2.7E-27 5.9E-32 199.3 24.4 292 17-313 12-304 (314)
9 PRK15430 putative chlorampheni 100.0 8.8E-27 1.9E-31 204.5 25.7 275 13-308 8-284 (296)
10 PRK11453 O-acetylserine/cystei 100.0 3.3E-26 7.1E-31 201.2 28.5 279 15-312 6-290 (299)
11 PF06027 DUF914: Eukaryotic pr 100.0 1.8E-26 3.8E-31 201.5 25.7 270 33-311 29-307 (334)
12 TIGR00950 2A78 Carboxylate/Ami 100.0 4.9E-26 1.1E-30 196.5 25.3 253 33-304 5-259 (260)
13 PRK10532 threonine and homoser 99.9 6.3E-25 1.4E-29 192.5 28.8 265 20-311 15-283 (293)
14 KOG1443 Predicted integral mem 99.9 7.4E-26 1.6E-30 188.1 18.8 292 15-308 14-314 (349)
15 TIGR03340 phn_DUF6 phosphonate 99.9 3.7E-23 7.9E-28 180.4 24.2 257 32-306 16-280 (281)
16 COG5070 VRG4 Nucleotide-sugar 99.9 9.1E-23 2E-27 162.2 14.5 283 21-312 10-299 (309)
17 KOG1581 UDP-galactose transpor 99.9 1.6E-21 3.4E-26 162.5 22.5 289 16-312 13-316 (327)
18 TIGR00688 rarD rarD protein. T 99.9 4.9E-21 1.1E-25 164.8 25.2 245 17-284 6-255 (256)
19 COG0697 RhaT Permeases of the 99.9 9.7E-20 2.1E-24 159.4 29.2 261 33-311 23-289 (292)
20 KOG1442 GDP-fucose transporter 99.9 2.3E-23 5.1E-28 170.5 3.7 294 17-313 28-331 (347)
21 COG5006 rhtA Threonine/homoser 99.9 3.2E-19 7E-24 144.9 23.1 250 34-309 29-282 (292)
22 COG2962 RarD Predicted permeas 99.8 4.1E-18 8.9E-23 142.2 25.3 276 14-311 8-285 (293)
23 PF04142 Nuc_sug_transp: Nucle 99.8 1.6E-19 3.4E-24 152.8 17.1 215 80-300 13-244 (244)
24 KOG1580 UDP-galactose transpor 99.8 8.8E-20 1.9E-24 146.5 12.7 256 45-308 50-312 (337)
25 KOG2234 Predicted UDP-galactos 99.8 9.5E-18 2.1E-22 143.9 24.4 290 17-312 15-325 (345)
26 TIGR00776 RhaT RhaT L-rhamnose 99.8 3.1E-17 6.6E-22 143.3 25.5 263 18-310 6-289 (290)
27 KOG3912 Predicted integral mem 99.8 7.6E-18 1.6E-22 138.8 19.1 284 23-308 9-333 (372)
28 KOG4510 Permease of the drug/m 99.8 7.1E-21 1.5E-25 155.5 -1.3 267 26-311 47-327 (346)
29 KOG2765 Predicted membrane pro 99.8 3.1E-18 6.6E-23 146.7 12.8 225 84-311 159-392 (416)
30 PF03151 TPT: Triose-phosphate 99.7 5.3E-17 1.2E-21 128.7 14.0 145 165-309 1-153 (153)
31 KOG1582 UDP-galactose transpor 99.7 1.5E-16 3.3E-21 130.5 14.5 291 13-311 38-334 (367)
32 KOG1583 UDP-N-acetylglucosamin 99.7 9.1E-17 2E-21 132.2 12.1 264 34-309 20-314 (330)
33 KOG2766 Predicted membrane pro 99.6 5.8E-16 1.3E-20 126.1 3.9 260 32-310 33-300 (336)
34 TIGR00803 nst UDP-galactose tr 99.4 1.2E-12 2.6E-17 110.2 7.7 194 108-307 2-222 (222)
35 COG2510 Predicted membrane pro 99.3 1.9E-11 4.2E-16 89.4 9.4 123 31-156 17-139 (140)
36 PF00892 EamA: EamA-like trans 99.3 2E-11 4.3E-16 93.0 10.1 119 32-155 6-125 (126)
37 COG2510 Predicted membrane pro 99.2 3.2E-11 7E-16 88.3 7.6 135 165-308 4-138 (140)
38 PF13536 EmrE: Multidrug resis 99.2 3.9E-11 8.4E-16 89.8 8.2 107 53-160 2-110 (113)
39 KOG4314 Predicted carbohydrate 99.2 1.6E-11 3.6E-16 96.6 5.4 220 83-311 52-278 (290)
40 PF00892 EamA: EamA-like trans 99.2 1.2E-10 2.7E-15 88.5 7.7 124 174-308 1-125 (126)
41 PF06800 Sugar_transport: Suga 99.0 1.1E-07 2.4E-12 80.6 21.1 238 48-305 12-267 (269)
42 PRK15430 putative chlorampheni 99.0 1.7E-08 3.7E-13 88.7 15.4 142 159-308 3-144 (296)
43 TIGR00688 rarD rarD protein. T 99.0 1.6E-08 3.5E-13 87.0 14.3 139 164-308 2-141 (256)
44 TIGR00950 2A78 Carboxylate/Ami 98.9 9.7E-08 2.1E-12 82.3 15.4 130 18-151 129-259 (260)
45 TIGR03340 phn_DUF6 phosphonate 98.9 3.1E-08 6.7E-13 86.5 12.2 133 166-309 3-135 (281)
46 PLN00411 nodulin MtN21 family 98.7 2.5E-07 5.5E-12 83.0 13.3 137 164-308 13-155 (358)
47 PF05653 Mg_trans_NIPA: Magnes 98.7 1.1E-07 2.4E-12 83.2 8.9 214 92-313 58-296 (300)
48 PF03151 TPT: Triose-phosphate 98.5 4.2E-06 9E-11 66.0 14.1 132 22-154 5-151 (153)
49 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.3E-06 2.8E-11 64.7 10.3 65 92-156 45-109 (111)
50 PRK11272 putative DMT superfam 98.5 4.4E-06 9.5E-11 73.3 14.5 109 48-157 177-286 (292)
51 PRK10532 threonine and homoser 98.5 6.3E-06 1.4E-10 72.4 15.1 129 20-155 151-280 (293)
52 PRK02971 4-amino-4-deoxy-L-ara 98.4 4.5E-06 9.9E-11 63.4 10.8 125 164-315 2-128 (129)
53 PRK13499 rhamnose-proton sympo 98.4 0.00023 5.1E-09 63.0 22.8 225 80-309 69-341 (345)
54 PRK11689 aromatic amino acid e 98.4 4.6E-06 9.9E-11 73.3 11.6 129 164-308 4-136 (295)
55 COG2962 RarD Predicted permeas 98.4 9.5E-06 2.1E-10 68.7 12.6 140 162-309 5-144 (293)
56 TIGR00817 tpt Tpt phosphate/ph 98.3 5.6E-06 1.2E-10 73.0 11.6 136 20-156 148-293 (302)
57 PRK11453 O-acetylserine/cystei 98.3 4.5E-05 9.7E-10 67.2 16.1 138 20-157 146-288 (299)
58 PTZ00343 triose or hexose phos 98.2 2.3E-05 4.9E-10 70.6 13.3 138 162-308 47-185 (350)
59 PF13536 EmrE: Multidrug resis 98.2 2.2E-05 4.8E-10 58.5 9.7 75 238-313 35-110 (113)
60 PRK02971 4-amino-4-deoxy-L-ara 97.9 3.9E-05 8.4E-10 58.3 7.0 73 86-158 50-124 (129)
61 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00031 6.8E-09 61.5 13.3 126 18-155 153-287 (290)
62 KOG2922 Uncharacterized conser 97.9 6.3E-05 1.4E-09 64.6 8.1 212 91-311 71-308 (335)
63 PF08449 UAA: UAA transporter 97.9 0.00053 1.1E-08 60.5 14.3 139 18-157 155-298 (303)
64 COG0697 RhaT Permeases of the 97.7 0.0015 3.2E-08 56.9 15.1 78 80-157 210-288 (292)
65 COG5006 rhtA Threonine/homoser 97.7 0.00086 1.9E-08 55.8 11.9 129 18-152 149-278 (292)
66 COG4975 GlcU Putative glucose 97.7 1.9E-05 4.1E-10 65.1 2.0 241 48-309 28-285 (288)
67 PRK15051 4-amino-4-deoxy-L-ara 97.7 0.00016 3.6E-09 53.5 6.7 57 252-308 52-108 (111)
68 PRK10452 multidrug efflux syst 97.7 0.00017 3.8E-09 53.8 6.8 70 88-157 34-104 (120)
69 PF04657 DUF606: Protein of un 97.6 0.0014 3.1E-08 50.5 10.6 131 165-306 2-138 (138)
70 PRK10650 multidrug efflux syst 97.5 0.0013 2.9E-08 48.2 9.7 68 87-154 38-106 (109)
71 PRK09541 emrE multidrug efflux 97.5 0.00041 8.8E-09 51.1 7.0 69 89-157 35-104 (110)
72 PRK11431 multidrug efflux syst 97.5 0.0012 2.6E-08 48.1 8.7 68 88-155 33-101 (105)
73 PF06027 DUF914: Eukaryotic pr 97.4 0.0024 5.2E-08 56.7 11.7 139 164-309 13-151 (334)
74 COG2076 EmrE Membrane transpor 97.4 0.0011 2.3E-08 48.0 7.7 71 86-156 32-103 (106)
75 PF06800 Sugar_transport: Suga 97.3 0.0053 1.1E-07 52.5 12.5 118 16-143 137-254 (269)
76 KOG1581 UDP-galactose transpor 97.1 0.013 2.9E-07 50.2 12.2 139 14-153 169-310 (327)
77 KOG2234 Predicted UDP-galactos 97.1 0.016 3.4E-07 50.9 12.9 144 165-308 16-163 (345)
78 PRK09541 emrE multidrug efflux 97.1 0.0055 1.2E-07 45.1 8.6 56 256-311 49-105 (110)
79 PF00893 Multi_Drug_Res: Small 97.1 0.0049 1.1E-07 44.0 8.2 58 90-147 35-93 (93)
80 PF04142 Nuc_sug_transp: Nucle 97.1 0.0013 2.9E-08 55.9 5.9 75 236-310 16-90 (244)
81 KOG1441 Glucose-6-phosphate/ph 97.0 0.0016 3.5E-08 57.0 6.2 141 15-156 161-307 (316)
82 PF04657 DUF606: Protein of un 97.0 0.035 7.5E-07 42.8 12.7 118 32-153 16-138 (138)
83 PRK10650 multidrug efflux syst 97.0 0.011 2.4E-07 43.4 9.3 53 256-308 54-107 (109)
84 COG2076 EmrE Membrane transpor 96.9 0.0094 2E-07 43.1 8.6 55 256-310 49-104 (106)
85 PRK10452 multidrug efflux syst 96.9 0.0089 1.9E-07 44.7 8.1 55 256-310 49-104 (120)
86 PRK13499 rhamnose-proton sympo 96.8 0.017 3.6E-07 51.5 11.2 140 162-309 5-153 (345)
87 TIGR00803 nst UDP-galactose tr 96.6 0.028 6E-07 47.1 10.5 65 89-153 157-221 (222)
88 PRK11431 multidrug efflux syst 96.5 0.025 5.4E-07 41.3 8.4 54 256-309 48-102 (105)
89 COG3238 Uncharacterized protei 96.3 0.068 1.5E-06 41.4 10.2 138 163-309 4-146 (150)
90 KOG4510 Permease of the drug/m 96.1 0.00019 4E-09 60.1 -5.1 133 163-309 37-169 (346)
91 PF05653 Mg_trans_NIPA: Magnes 96.0 0.019 4.2E-07 50.4 6.4 118 161-308 4-121 (300)
92 PF10639 UPF0546: Uncharacteri 95.6 0.024 5.1E-07 41.8 4.6 69 85-154 43-112 (113)
93 COG3238 Uncharacterized protei 95.6 0.65 1.4E-05 36.0 12.5 129 23-154 11-144 (150)
94 PF00893 Multi_Drug_Res: Small 95.5 0.062 1.3E-06 38.3 6.5 45 256-300 48-93 (93)
95 COG5070 VRG4 Nucleotide-sugar 94.3 0.43 9.3E-06 39.4 8.8 134 20-154 158-294 (309)
96 COG4975 GlcU Putative glucose 93.3 0.11 2.3E-06 43.5 3.7 132 165-312 3-139 (288)
97 KOG1444 Nucleotide-sugar trans 93.0 0.65 1.4E-05 40.5 8.3 137 18-155 158-299 (314)
98 KOG2765 Predicted membrane pro 93.0 1.1 2.4E-05 40.0 9.6 136 20-158 250-392 (416)
99 KOG1580 UDP-galactose transpor 92.8 0.096 2.1E-06 43.4 2.8 73 82-154 239-311 (337)
100 PF10639 UPF0546: Uncharacteri 92.7 0.51 1.1E-05 34.8 6.3 51 256-306 60-111 (113)
101 PF06379 RhaT: L-rhamnose-prot 92.0 3.8 8.2E-05 36.3 11.7 140 163-310 6-154 (344)
102 PF07857 DUF1632: CEO family ( 91.6 0.23 5E-06 42.3 3.9 128 165-310 1-135 (254)
103 KOG4314 Predicted carbohydrate 86.6 0.22 4.8E-06 40.2 0.2 61 249-309 65-125 (290)
104 KOG1582 UDP-galactose transpor 85.0 6.6 0.00014 33.7 8.0 124 35-159 208-335 (367)
105 PRK02237 hypothetical protein; 79.4 18 0.00039 26.3 7.5 47 265-311 61-107 (109)
106 KOG3912 Predicted integral mem 76.8 35 0.00077 29.6 9.7 136 18-155 178-333 (372)
107 KOG2922 Uncharacterized conser 75.7 0.73 1.6E-05 40.2 -0.5 118 161-308 18-135 (335)
108 PF02694 UPF0060: Uncharacteri 74.1 14 0.0003 26.8 5.7 46 266-311 60-105 (107)
109 COG3169 Uncharacterized protei 69.3 38 0.00083 24.1 9.8 31 125-155 84-114 (116)
110 KOG1442 GDP-fucose transporter 68.8 25 0.00053 30.4 6.9 108 48-155 215-326 (347)
111 COG1742 Uncharacterized conser 68.1 43 0.00093 24.2 8.7 42 116-157 64-105 (109)
112 PF02694 UPF0060: Uncharacteri 63.4 55 0.0012 23.8 8.0 45 113-157 60-104 (107)
113 PRK02237 hypothetical protein; 61.9 60 0.0013 23.7 9.7 44 113-156 62-105 (109)
114 PF04342 DUF486: Protein of un 58.7 68 0.0015 23.3 8.2 52 103-154 54-106 (108)
115 KOG2766 Predicted membrane pro 57.7 2.6 5.7E-05 35.7 -0.6 102 195-307 47-148 (336)
116 KOG4831 Unnamed protein [Funct 53.9 22 0.00048 25.7 3.5 61 94-154 62-123 (125)
117 PF06379 RhaT: L-rhamnose-prot 53.8 1.7E+02 0.0036 26.3 21.8 258 49-308 34-339 (344)
118 PF04342 DUF486: Protein of un 52.2 6.6 0.00014 28.3 0.7 29 278-306 77-105 (108)
119 PF11139 DUF2910: Protein of u 40.8 2.1E+02 0.0045 23.6 11.1 39 117-155 159-210 (214)
120 COG3169 Uncharacterized protei 40.5 14 0.00031 26.2 0.9 30 278-307 84-113 (116)
121 PF05297 Herpes_LMP1: Herpesvi 39.3 9.9 0.00021 32.7 0.0 94 107-203 46-143 (381)
122 KOG1583 UDP-N-acetylglucosamin 37.2 2.9E+02 0.0062 24.2 8.7 47 109-155 267-313 (330)
123 PF08627 CRT-like: CRT-like; 35.9 1.2E+02 0.0027 22.7 5.2 54 13-67 53-106 (130)
124 PF07123 PsbW: Photosystem II 32.5 57 0.0012 24.8 3.1 28 160-187 102-129 (138)
125 PF07168 Ureide_permease: Urei 31.6 1.4E+02 0.003 26.4 5.6 131 170-307 2-144 (336)
126 PF06123 CreD: Inner membrane 24.1 6E+02 0.013 23.8 12.5 67 120-188 307-375 (430)
127 KOG4831 Unnamed protein [Funct 23.8 1E+02 0.0022 22.5 2.9 51 256-307 71-123 (125)
128 COG2116 FocA Formate/nitrite f 23.0 5E+02 0.011 22.5 7.8 24 288-311 236-259 (265)
129 PF00909 Ammonium_transp: Ammo 22.7 6E+02 0.013 23.3 20.3 25 162-186 274-299 (399)
130 PF15055 DUF4536: Domain of un 22.6 64 0.0014 19.7 1.5 20 294-313 8-27 (47)
131 COG3247 HdeD Uncharacterized c 21.6 4.5E+02 0.0097 21.4 12.0 39 270-308 134-176 (185)
132 PRK11357 frlA putative fructos 21.4 6.5E+02 0.014 23.2 10.5 16 295-310 419-434 (445)
133 TIGR01167 LPXTG_anchor LPXTG-m 21.3 58 0.0012 17.7 1.1 16 290-305 11-26 (34)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.7e-37 Score=277.27 Aligned_cols=295 Identities=22% Similarity=0.354 Sum_probs=250.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCC-hhhhHHHHHHHHH
Q 021266 14 GSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLK-SQKQFFKISALGI 92 (315)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~ 92 (315)
.+++....++.|+..|+..++.||+++++ +|+|++++.+|++++.++..+.+. .+.+++++.. ++++++..++.|+
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl 122 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGL 122 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHH
Confidence 36888999999999999999999999998 889999999999999887666553 3333333332 4567889999999
Q ss_pred HHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHHH
Q 021266 93 IFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCISA 172 (315)
Q Consensus 93 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a 172 (315)
++.......+.|+++++++.++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+.++.|++++++|
T Consensus 123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s 202 (350)
T PTZ00343 123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLS 202 (350)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHH
Confidence 98877777889999999999999999999999999999999999999999999999999999888888888999999999
Q ss_pred HHHHHHHHHHHHHHhccCC---CCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHH-----hhh-chhHHHHHHHHH
Q 021266 173 TAARALKTVLQGILLSSEG---EKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIA-----LAR-QDVEFLWYLMFN 243 (315)
Q Consensus 173 ~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~ 243 (315)
++++|+|+++.|+..++++ ++.++.+...+..+.+.++++|.....|......... ... .....+..++.+
T Consensus 203 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s 282 (350)
T PTZ00343 203 NLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFS 282 (350)
T ss_pred HHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHH
Confidence 9999999999999885332 2467888888889999999999887776543221110 011 112344566778
Q ss_pred HHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 244 SSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
++..+.+|.+.|.++++++|.++++.++++|+++++.|++++||++|..+++|.++++.|+++|++.|
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 88888999999999999999999999999999999999999999999999999999999999998753
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=9.7e-38 Score=275.03 Aligned_cols=292 Identities=26% Similarity=0.348 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCL 96 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 96 (315)
+....+..|+..|+..++.||+++++ +++|..+++.|+..+.+...+.+. .+.++++ ..++++++..++.|++++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWS-SGLPKRL-KISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCC-CCCHHHHHHHHHHHHHHHH
Confidence 35678899999999999999999987 888999999999999887766643 2223322 2457789999999999989
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHHHHHHH
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCISATAAR 176 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 176 (315)
+..+.+.+++|++++++++++++.|+++.+++++++|||++++++.++++++.|+.+...+|.+.+..|+++++++++++
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 157 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF 157 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877667777788999999999999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHH--HHHhh--hchhHHHHHHHHHHH-HHHHHH
Q 021266 177 ALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGI--TIALA--RQDVEFLWYLMFNSS-LAYFVN 251 (315)
Q Consensus 177 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~l~~~~~-~~~~~~ 251 (315)
|.|.++.||.. +++++|+.+.+.|+...+.+.+.|.....|+..... ..... ......+...+..+. +...+|
T Consensus 158 a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 158 VSRNIFSKKAM--TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHhh--ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999986 334789999999999999999999887766543221 11110 011122332334443 444566
Q ss_pred HHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhccc
Q 021266 252 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQS 314 (315)
Q Consensus 252 ~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~~ 314 (315)
...+.+++++||++.++..+++|+.++++|++++||++|..+++|.++++.|+++|++.|.|+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK 298 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence 677889999999999999999999999999999999999999999999999999999877655
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=260.64 Aligned_cols=298 Identities=44% Similarity=0.672 Sum_probs=265.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHH
Q 021266 14 GSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGII 93 (315)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 93 (315)
...........|+.+++..+..||++++++++++|++++..+...+.+....... .+..|..+..++.+++..++.++.
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~~~~~~~~~~~~~llpl~~~ 92 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKV-LKLVPPSKISSKLPLRTLLPLGLV 92 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCCccccccchHHHHHHHHH
Confidence 4466777899999999999999999999888999999999988888888877775 777776666678899999999999
Q ss_pred HHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHHHH
Q 021266 94 FCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCISAT 173 (315)
Q Consensus 94 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~ 173 (315)
++++.++.|.+++|++++.+++++++.|+++.++++++.+|+.++..+.++...+.|+.+.+.+|.++++.|.+.+.++.
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~ 172 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN 172 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHH-HHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHH
Q 021266 174 AARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLL-PAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNL 252 (315)
Q Consensus 174 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (315)
+..++++++.|+..++|+++.|+.+...|+...+.+.++ |.....|+... .......++...+..+..+ ++++.+|+
T Consensus 173 ~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s-v~~f~~Nl 250 (316)
T KOG1441|consen 173 LAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS-VLAFLLNL 250 (316)
T ss_pred HHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH-HHHHHHHH
Confidence 999999999999997778899999999999999999998 87766665443 1111122333344444444 99999999
Q ss_pred HHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhccc
Q 021266 253 TNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQS 314 (315)
Q Consensus 253 ~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~~ 314 (315)
..|.++++++|++.++.++.|.+..++.|+++|+|++|+.+.+|+.+.+.|+++|++.|.|+
T Consensus 251 s~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 251 SAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE 312 (316)
T ss_pred HHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999887654
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.4e-30 Score=231.95 Aligned_cols=288 Identities=16% Similarity=0.186 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCL 96 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 96 (315)
.....++.-=....++..+.|..++. |++ |..+...|+.++.+++.++.+..+++++.+..+++++......|++...
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~ 90 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM 90 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence 34455555556667778899999965 888 9999999999999999888653332222222245566777777777666
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHH------hccccCcchhhhhhhhhhhhhhhccc-cC----------
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLM------TLKREGWLTYVTLVPVVTGVIIASGG-EP---------- 159 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~---------- 159 (315)
.+.+.+.|++|+++++++++.++.|+++.++++++ +|||++++|++|++++++|+.++... +.
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 77789999999999999999999999999999999 69999999999999999999976532 11
Q ss_pred -------------ccc-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCh-HHHHHHHhHHHHHHHHHHHHHhcchhHH
Q 021266 160 -------------SFH-LFGFIMCISATAARALKTVLQGILLSSEGEKLNS-MNLLMYMAPVAAIFLLPAALIMEKDVVG 224 (315)
Q Consensus 160 -------------~~~-~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (315)
..+ ..|+.+.++++++||+|+++.|+.. .++++ ...++++...+.+...+.....|+.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 112 4599999999999999999999986 33333 4556666666666655555555433222
Q ss_pred HHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHH
Q 021266 225 ITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGV 304 (315)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~ 304 (315)
.+. ...+...+ .++..++.....+.++++++++.||.+++++.+++|+++.++|++++||++++.+++|.++++.|+
T Consensus 247 ~~~--~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv 323 (358)
T PLN00411 247 VWI--IHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323 (358)
T ss_pred cce--eccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 111 11112222 233344444455667778999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcc
Q 021266 305 ILYNEAKRQ 313 (315)
Q Consensus 305 ~~~~~~~~~ 313 (315)
++.++.+++
T Consensus 324 ~l~~~~~~~ 332 (358)
T PLN00411 324 YAVMWGKAN 332 (358)
T ss_pred HHHHhhhhh
Confidence 998866544
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=1.5e-28 Score=216.24 Aligned_cols=281 Identities=21% Similarity=0.324 Sum_probs=236.1
Q ss_pred HHHHHHHHHHHHhhcCCC-hhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhccc
Q 021266 29 NIGVILLNKYLLSSYGFK-YPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKY 107 (315)
Q Consensus 29 ~~~~~~~~k~~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~ 107 (315)
.....+.++.+.++.... +|.++++.|+..+.+...+.....+ .+..++.+++.+++.++++.++..+.+.|++|
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333455667777664444 7999999999999988887765333 12235667788888999999999999999999
Q ss_pred chhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCc----------ccHHHHHHHHHHHHHHH
Q 021266 108 LPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPS----------FHLFGFIMCISATAARA 177 (315)
Q Consensus 108 ~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----------~~~~G~~~~l~a~~~~a 177 (315)
+|.+..++++++.|+++++++.+++|||.+++|++++.+.++|+++...+|.+ ....|+++.+.+.++.|
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988754321 11349999999999999
Q ss_pred HHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 021266 178 LKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLV 257 (315)
Q Consensus 178 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 257 (315)
.+.+++||.. ++.+.++.+.++|.+.++.+...+.....+..+..+..+....++..+..++..++.++..+...+..
T Consensus 168 ~~~~~qe~~~--~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~ 245 (303)
T PF08449_consen 168 FTGVYQEKLF--KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYL 245 (303)
T ss_pred HHHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 56777999999999999999888777763222222233333455667888888999999888888899
Q ss_pred HhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhcccC
Q 021266 258 TKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQSK 315 (315)
Q Consensus 258 ~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~~~ 315 (315)
.++.||++.+++..+|.+.+++++.++||+++++.+|.|..+++.|..+|+..|+|++
T Consensus 246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999888775
No 6
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=1.2e-27 Score=209.87 Aligned_cols=268 Identities=17% Similarity=0.144 Sum_probs=197.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHH
Q 021266 15 SFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIF 94 (315)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (315)
.......+++|.... ...|...++ +| |..+...|+..+.+++.++.. +++ .++++++..+..++.+
T Consensus 6 ~l~~l~a~~~Wg~~~----~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~----~~~---~~~~~~~~~~~~~l~~ 71 (295)
T PRK11689 6 TLIGLIAILLWSTMV----GLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTVG----FPR---LRQFPKRYLLAGGLLF 71 (295)
T ss_pred hHHHHHHHHHHHHHH----HHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHcc----ccc---cccccHHHHHHHhHHH
Confidence 345556667776544 477988887 77 999999999999988876531 111 1222334445555556
Q ss_pred HHHHHhhhhhcc----cchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccC-----------
Q 021266 95 CLSVVGGNVSLK----YLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEP----------- 159 (315)
Q Consensus 95 ~~~~~~~~~al~----~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----------- 159 (315)
..+..+.+.+++ +.++.+++++.++.|+++.+++++++|||++++++.++.++++|+.++..++.
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~ 151 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNI 151 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcc
Confidence 667777777765 46788889999999999999999999999999999999999999998865432
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHH
Q 021266 160 SFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWY 239 (315)
Q Consensus 160 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (315)
+.+..|+.+.++++++||.|+++.||.. ++.++..... ..+...+.+.....+.+. ...+...+..
T Consensus 152 ~~~~~G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~ 217 (295)
T PRK11689 152 ASNPLSYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFLSPQPA-------MVFSLPAIIK 217 (295)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHHhcCcc-------ccCCHHHHHH
Confidence 1235699999999999999999999974 3446654422 222333333222222111 1122334444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhh
Q 021266 240 LMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 240 l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
++..++.+...+.++++.+++.++...+.+.+++|+++.+++++++||+++..+++|.++++.|+++....
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 55555656666778889999999999999999999999999999999999999999999999999776543
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=1e-26 Score=203.74 Aligned_cols=271 Identities=18% Similarity=0.210 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHH-HHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIF-CLSV 98 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 98 (315)
...++|.... ...|...++ .+ |..++..|+..+.+++.++....++ + . +++++++.....|.+. ...+
T Consensus 15 ~~~~iWg~~~----~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~--~-~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 15 ALYIIWGSTY----LVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGH-P--L-PTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHhhHH----HHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCC-C--C-CcHHHHHHHHHHHHHHHHHHH
Confidence 3445565544 477988876 77 9999999999999998877653322 1 1 2345566666666654 5677
Q ss_pred Hhhhhhc-ccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc-cCcccHHHHHHHHHHHHHH
Q 021266 99 VGGNVSL-KYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG-EPSFHLFGFIMCISATAAR 176 (315)
Q Consensus 99 ~~~~~al-~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~ 176 (315)
.+.+.+. +++++++++++.++.|+++.+++.+ +|||++++++.++.++++|+.++..+ +.+.+..|+.+.++++++|
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~ 162 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW 162 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence 8888898 9999999999999999999999985 69999999999999999999988644 3345568999999999999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHH
Q 021266 177 ALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAY-FVNLTNF 255 (315)
Q Consensus 177 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 255 (315)
|.+.+..||.. .+ ++...+.++...+...+.+.....+.+. . ...+...|..++..++.+. ..+...+
T Consensus 163 a~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~i~~l~i~~s~~~~~l~~ 231 (292)
T PRK11272 163 AFGSVWSSRLP----LP-VGMMAGAAEMLAAGVVLLIASLLSGERL-T-----ALPTLSGFLALGYLAVFGSIIAISAYM 231 (292)
T ss_pred HHHHHHHHhcC----CC-cchHHHHHHHHHHHHHHHHHHHHcCCcc-c-----ccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999863 22 3455667777777777777655433221 1 0112233444455455443 4456677
Q ss_pred HHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhcc
Q 021266 256 LVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQ 313 (315)
Q Consensus 256 ~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~ 313 (315)
+++++.++.+.+...+++|+.+.+++++++||++|..+++|.++++.|+++.++.++|
T Consensus 232 ~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 232 YLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999999999999999999999999988765544
No 8
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.7e-27 Score=199.34 Aligned_cols=292 Identities=22% Similarity=0.276 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCL 96 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 96 (315)
........+..+|..+++.||++++++++|....+...|.+.+.+.+....+ .|..+.++ .+++..+.++|..+.+.+
T Consensus 12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~-l~~~~~kk~~P~~~lf~~ 89 (314)
T KOG1444|consen 12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRP-LDLRTAKKWFPVSLLFVG 89 (314)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCC-cChHHHHHHccHHHHHHH
Confidence 3566678888999999999999999977665566666999999888887765 56555443 367788889999999999
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHHHHHHH
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCISATAAR 176 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 176 (315)
.......+++|.++++++++++.+|+++++.+..++|.|++++.|.++....+|.......|.+++..|..+.+...++.
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~ 169 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTT 169 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHH-hhhchhHHHHHHHHHHHHHHHHHHHHH
Q 021266 177 ALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIA-LARQDVEFLWYLMFNSSLAYFVNLTNF 255 (315)
Q Consensus 177 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 255 (315)
+.+.++.|+.. +..+.+.+++++|.++.+.+.......+.|+.+ +...+ ........+..+.+++++++..+++.+
T Consensus 170 a~~~v~~kk~v--d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~ 246 (314)
T KOG1444|consen 170 AAFVVYVKKSV--DSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF 246 (314)
T ss_pred HHHHHHHHHhh--ccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 667789999999999999999988888887765 22222 223456778899999999999999999
Q ss_pred HHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhcc
Q 021266 256 LVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQ 313 (315)
Q Consensus 256 ~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~ 313 (315)
++.+..++++.++++..+...+.+.+.++.|++.++...+|..+.+.|..+|+..+.|
T Consensus 247 ~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~ 304 (314)
T KOG1444|consen 247 LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFR 304 (314)
T ss_pred HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhh
Confidence 9999999999999997777777888888888899999999999999999999976644
No 9
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.96 E-value=8.8e-27 Score=204.49 Aligned_cols=275 Identities=10% Similarity=0.121 Sum_probs=193.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccc--cCChhhhHHHHHHH
Q 021266 13 YGSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQ--HLKSQKQFFKISAL 90 (315)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 90 (315)
+.........++|.... ...|.. .+ ++ |..+..+|...+.+++.++....++++.. +..+++++......
T Consensus 8 ~g~~~~l~a~~~wg~~~----~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (296)
T PRK15430 8 QGVLLALAAYFIWGIAP----AYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS 79 (296)
T ss_pred hHHHHHHHHHHHHHHHH----HHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence 33344445555565544 355764 43 67 99999999999988777665422221110 01123333334455
Q ss_pred HHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHH
Q 021266 91 GIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCI 170 (315)
Q Consensus 91 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l 170 (315)
++....++.+.+.|++++++++++++.++.|+++.+++++++|||+++++|.++.+++.|++++..++.+. ..+.+
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l 155 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIAL 155 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999999886443322 24678
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 021266 171 SATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFV 250 (315)
Q Consensus 171 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (315)
+++++||.|.+..|+.. +++..+......+....+.+...+.. +.. ... ....+...+..++..++.+...
T Consensus 156 ~aa~~~a~~~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~---~~~~~~~~~~~~~~~g~~t~i~ 226 (296)
T PRK15430 156 GLAFSFAFYGLVRKKIA--VEAQTGMLIETMWLLPVAAIYLFAIA---DSS-TSH---MGQNPMSLNLLLIAAGIVTTVP 226 (296)
T ss_pred HHHHHHHHHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHHHHc---cCC-ccc---ccCCcHHHHHHHHHHHHHHHHH
Confidence 89999999999999863 22222333334444444433322211 111 100 0011112234455555566677
Q ss_pred HHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 251 NLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 251 ~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
+.+.++.+++.+|...+.+.+++|+++.++|++++||++++.+++|+++++.|+.+..
T Consensus 227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999999999988877665
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.96 E-value=3.3e-26 Score=201.23 Aligned_cols=279 Identities=16% Similarity=0.207 Sum_probs=199.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHH
Q 021266 15 SFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIF 94 (315)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (315)
.......+++|....+ ..|...++ ++ |..+..+|+.++.+.+.+..+ + ++. +++..+..++..
T Consensus 6 ~l~~l~~~~~Wg~~~~----~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~--~--~~~------~~~~~~~~g~~~ 68 (299)
T PRK11453 6 GVLALLVVVVWGLNFV----VIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVA--R--PKV------PLNLLLGYGLTI 68 (299)
T ss_pred HHHHHHHHHHHhhhHH----HHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhc--C--CCC------chHHHHHHHHHH
Confidence 3455666777766554 66888876 77 999999999988776655432 1 111 122333344433
Q ss_pred -HHHHHhhhhhccc-chhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc---CcccHHHHHHH
Q 021266 95 -CLSVVGGNVSLKY-LPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE---PSFHLFGFIMC 169 (315)
Q Consensus 95 -~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~ 169 (315)
.....+.+.+++| .+++.++++.++.|+++.+++++++|||++++++.++.++++|+.++..++ .+.+..|+.++
T Consensus 69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~ 148 (299)
T PRK11453 69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLT 148 (299)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHH
Confidence 3455567788888 688999999999999999999999999999999999999999999886542 23345799999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHH
Q 021266 170 ISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYF 249 (315)
Q Consensus 170 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 249 (315)
+.++++||.|.++.||..++ ....+......+....+.+.........|++... .......+...+..++..++++..
T Consensus 149 l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~i~~t~ 226 (299)
T PRK11453 149 LAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATM-IHSLVTIDMTTILSLMYLAFVATI 226 (299)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhh-hhhhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999997521 1122233444455544443333333333332211 011112334456666666655554
Q ss_pred -HHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhc
Q 021266 250 -VNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKR 312 (315)
Q Consensus 250 -~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~ 312 (315)
.+.+++..+++.++.+.+.+.+++|+.+.+++++++||+++..+++|.++++.|+++..+.++
T Consensus 227 ~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 227 VGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 455677889999999999999999999999999999999999999999999999988765443
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.8e-26 Score=201.47 Aligned_cols=270 Identities=15% Similarity=0.205 Sum_probs=220.0
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhH
Q 021266 33 ILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSF 112 (315)
Q Consensus 33 ~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 112 (315)
...++.+-++ |.+.|.+.+++.+..-.++..+....++..++.....++++++.+..+++...++.+.+.|++|++.+.
T Consensus 29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 3455555555 788899999999988777666655432222221222345666667789999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc---------CcccHHHHHHHHHHHHHHHHHHHHH
Q 021266 113 NQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE---------PSFHLFGFIMCISATAARALKTVLQ 183 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~a~~~~a~~~v~~ 183 (315)
++++.+++.+++++++++++|||+++.|++|++++++|++++...| .++...|+++++.++.++|.++++.
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~ 187 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE 187 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999886543 2345899999999999999999999
Q ss_pred HHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 021266 184 GILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSA 263 (315)
Q Consensus 184 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a 263 (315)
|+.. ++.++.+...+..+++.++..+.....|...++. ..++.....+++..+++.+..+...-..++..+|
T Consensus 188 E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~----~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssA 259 (334)
T PF06027_consen 188 EKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIES----IHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSA 259 (334)
T ss_pred HHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc----cCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9998 3457899999999999999988888777665542 2233445556666666666666666677999999
Q ss_pred hhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 264 LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
+...+-.....+++.+++++++|+++++..++|.++++.|.++|+..+
T Consensus 260 t~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 260 TFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred ceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 999998999999999999999999999999999999999999998644
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=4.9e-26 Score=196.48 Aligned_cols=253 Identities=17% Similarity=0.165 Sum_probs=198.8
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhH
Q 021266 33 ILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSF 112 (315)
Q Consensus 33 ~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 112 (315)
....|..+++ +.| |..+...|.+.+.+++.+..+ .+ + ++++..+.....++...+++.+.+.|++|+++++
T Consensus 5 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~-~~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 75 (260)
T TIGR00950 5 GVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLR-RR--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE 75 (260)
T ss_pred HHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHH-hc--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 4567888876 345 999999999988888877654 22 1 2333334444444567889999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 021266 113 NQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE-PSFHLFGFIMCISATAARALKTVLQGILLSSEG 191 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~ 191 (315)
++++.++.|+++.+++.+++|||++++++.++.++++|+.++..++ .+.+..|+.+.+.++++++.+.++.|+.. ++
T Consensus 76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~--~~ 153 (260)
T TIGR00950 76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV--KK 153 (260)
T ss_pred hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh--hc
Confidence 9999999999999999999999999999999999999999876543 45567899999999999999999999986 33
Q ss_pred CCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHH-HHHHHHHHHHHhcCchhhHHHhh
Q 021266 192 EKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLA-YFVNLTNFLVTKHTSALTLQVLG 270 (315)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~a~~~s~~~ 270 (315)
.+.++.....+....+.+.+.|.....+.+. . .+...+..++..++++ ...+.+.++++++.++.+.+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~ 225 (260)
T TIGR00950 154 EGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q-------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA 225 (260)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 3333455555677788888877766543221 1 1223344445445444 45566778899999999999999
Q ss_pred hhhhHhhhhhhheeecccccccccchhHHHHHHH
Q 021266 271 NAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGV 304 (315)
Q Consensus 271 ~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~ 304 (315)
+++|+++.+++++++||+++..+++|..+++.|+
T Consensus 226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999886
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=6.3e-25 Score=192.45 Aligned_cols=265 Identities=14% Similarity=0.065 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVV 99 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 99 (315)
.++.+-..+........|+..++ +| |..+..+|++.+.+++.++.+. ++ + + .++++++..+..|+.....+.
T Consensus 15 ~~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~-~~-~--~-~~~~~~~~~~~~g~~~~~~~~ 86 (293)
T PRK10532 15 LLLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKP-WR-L--R-FAKEQRLPLLFYGVSLGGMNY 86 (293)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhH-Hh-c--c-CCHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444579999987 67 9999999999999888776541 11 1 1 234566667777887777888
Q ss_pred hhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc--c-CcccHHHHHHHHHHHHHH
Q 021266 100 GGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG--E-PSFHLFGFIMCISATAAR 176 (315)
Q Consensus 100 ~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~a~~~~ 176 (315)
+.+.+++|+|++.++++..+.|+++.+++. |++++. .++.++++|+.++... + .+.+..|+++.++++++|
T Consensus 87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~ 160 (293)
T PRK10532 87 LFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACW 160 (293)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHH
Confidence 899999999999999999999999998873 555544 4456778998876532 2 233567999999999999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHH
Q 021266 177 ALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAY-FVNLTNF 255 (315)
Q Consensus 177 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 255 (315)
|.|.+..||.. ++.++... .+....+.+.+.|.....+... ..+...+..++..++++. ..+.+++
T Consensus 161 a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~l~lgv~~t~~~~~l~~ 227 (293)
T PRK10532 161 AIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAGEA--------LWHWSILPLGLAVAILSTALPYSLEM 227 (293)
T ss_pred HHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccCcc--------cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999985 34456555 4555666666666655433211 012222333334444444 4455667
Q ss_pred HHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 256 LVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 256 ~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
+.+++.++.+++++.+++|+++.++|++++||+++..+++|.++++.|...+.+..
T Consensus 228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999886543
No 14
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.94 E-value=7.4e-26 Score=188.05 Aligned_cols=292 Identities=21% Similarity=0.411 Sum_probs=251.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccC---ccccCChhhhHHHHHHHH
Q 021266 15 SFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVA---PIQHLKSQKQFFKISALG 91 (315)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~l~~~ 91 (315)
++.....+..|+.+|+++.+.+|+.-.+ +++|.+++..|+++-.+......+..+.+ .+....++++.++.+|.+
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta 91 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA 91 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence 4556666799999999999999998877 89999999999998888877766533222 223456788899999999
Q ss_pred HHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHH
Q 021266 92 IIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCIS 171 (315)
Q Consensus 92 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 171 (315)
++-++...+.|++++|++.+.|++.++.+++|+.+++.++.-||+++.-.+.++++..|+.+.+..+.+++..|.+++.+
T Consensus 92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~ 171 (349)
T KOG1443|consen 92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA 171 (349)
T ss_pred hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCC-CCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHH-hhhch----hHHHHHHHHHHH
Q 021266 172 ATAARALKTVLQGILLSSEG-EKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIA-LARQD----VEFLWYLMFNSS 245 (315)
Q Consensus 172 a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~~~~ 245 (315)
|+++.+++..+.+.+.++++ .+-+|....+.......+.++|....+|+.....+.. +...+ ......+.+.|.
T Consensus 172 aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 172 ASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999997655 5678999999999999999999999999875432211 11111 223345556677
Q ss_pred HHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 246 LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 246 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
.+++.-.+-|..+++++..+.++.+.++.+.+.+++.++.+|.++...|+|..+...|+..|.
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 777777778889999999999999999999999999999999999999999999999999993
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.92 E-value=3.7e-23 Score=180.36 Aligned_cols=257 Identities=12% Similarity=0.085 Sum_probs=182.4
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhh
Q 021266 32 VILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVS 111 (315)
Q Consensus 32 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 111 (315)
.+...|...++ +++. ...+...+.+++.+.......++..+..+++.+...+..++....+..+.+.|+++.+++
T Consensus 16 ~~~~~k~~~~~---~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 16 WNLMAKSHADK---EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHhhcCCc---hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 34466766654 2132 355666666666665542211221122244555566666777888999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccC-cccHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 021266 112 FNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEP-SFHLFGFIMCISATAARALKTVLQGILLSSE 190 (315)
Q Consensus 112 ~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~ 190 (315)
+++.+.++.|+++.+++++++|||+++++|.|+.+++.|+.++..++. +.+..|+.+.+.++++++.|.+..|+..
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~--- 167 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAA--- 167 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccc---
Confidence 999999999999999999999999999999999999999998765432 3445788899999999999999888753
Q ss_pred CCCCChH----HHHHHHhHHHHHHHHHHHHH---hcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 021266 191 GEKLNSM----NLLMYMAPVAAIFLLPAALI---MEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSA 263 (315)
Q Consensus 191 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a 263 (315)
++.++. ....+...... .|.... .++.... ..+...+..+...++.....+.+.++.+++.++
T Consensus 168 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a 237 (281)
T TIGR03340 168 -LGVPAFYSALGYLGIGFLAMG---WPFLLLYLKRHGRSMF------PYARQILPSATLGGLMIGGAYALVLWAMTRLPV 237 (281)
T ss_pred -cchhcccccHHHHHHHHHHHH---HHHHHHHHHHhccchh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 222322 12222222221 222221 1111110 111233444555566666667778899999999
Q ss_pred hhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHH
Q 021266 264 LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVIL 306 (315)
Q Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~ 306 (315)
...+...+++|+++.++|++++||+++..+++|.++++.|+++
T Consensus 238 ~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 238 ATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred eEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999875
No 16
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.90 E-value=9.1e-23 Score=162.23 Aligned_cols=283 Identities=17% Similarity=0.212 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHh
Q 021266 21 LITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVG 100 (315)
Q Consensus 21 ~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 100 (315)
....+..+++.+++.||++++..||+..+.+...|.+++.+-+....+ .|..+. +..+.+.+.+.+++.....+.
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~f----R~t~aK~WfpiSfLLv~MIyt 84 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEF----RLTKAKKWFPISFLLVVMIYT 84 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhe----ehhhhhhhcCHHHHHHHHHHh
Confidence 456778889999999999999999998889999999998888777654 444332 345566777889988888899
Q ss_pred hhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcc-------cHHHHHHHHHHH
Q 021266 101 GNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSF-------HLFGFIMCISAT 173 (315)
Q Consensus 101 ~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~-------~~~G~~~~l~a~ 173 (315)
...+++|++.+.+++.++++.+.++..+..++|.|++..+..+.++.++.......+|.+. -.-|.++.....
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Nc 164 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNC 164 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhh
Confidence 9999999999999999999999999999999999999999999999999988888777532 235899999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHH
Q 021266 174 AARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLT 253 (315)
Q Consensus 174 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 253 (315)
+..+.+....|+.. +-.+....+.++|.++.+.++++...+++|++......... ....+..+..+|+++++..++
T Consensus 165 lssaafVL~mrkri--~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl--~~d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 165 LSSAAFVLIMRKRI--KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL--SVDSLMAMFISGLCSVGISYC 240 (309)
T ss_pred HhHHHHHHHHHHhh--cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC--ChHHHHHHHHHHHHHhhhhhc
Confidence 99999999888876 44566788999999999999999999999887655333222 233466778899999999999
Q ss_pred HHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhc
Q 021266 254 NFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKR 312 (315)
Q Consensus 254 ~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~ 312 (315)
.-|+++.+++++.++++.++.....+.|.++||||.+...+....+-+.+...|...+.
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks 299 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS 299 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988886543
No 17
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.6e-21 Score=162.54 Aligned_cols=289 Identities=17% Similarity=0.237 Sum_probs=242.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHH
Q 021266 16 FFTLGLITIWYSSNIGVILLNKYLLSS------YGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISA 89 (315)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (315)
.+.++++..-++..+..-++++.+.++ ..|++|.++.+.|.+++.++-..+..+.+.. ...+++++.+..
T Consensus 13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~y~~ 88 (327)
T KOG1581|consen 13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhHHhH
Confidence 444555556666677777787777654 2377799999999999999997776533222 345777888888
Q ss_pred HHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc---c------Cc
Q 021266 90 LGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG---E------PS 160 (315)
Q Consensus 90 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~---~------~~ 160 (315)
.++...++..+.+.|++|++-++..+.+++--+-+++...++.|+|.+..++++..++..|+.+.... | .+
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ 168 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRE 168 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999977532 1 13
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHH
Q 021266 161 FHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYL 240 (315)
Q Consensus 161 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (315)
+.+.|+.+....-++.++-+..++++. ++.++++++++++.++++++...... + +.....+..+....+++.+.-+
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf--~~~k~s~~~mM~~vNLf~~i~~~~~l-i-~qg~~~~av~F~~~hp~~~~Di 244 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLF--KKYKVSSLHMMFGVNLFSAILNGTYL-I-LQGHLLPAVSFIKEHPDVAFDI 244 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHh--ccCCccHhHHHHHHHHHHHHHHHHhh-h-cCCCCchHHHHHHcChhHHHHH
Confidence 468999999999999999999999999 67899999999999999998887652 2 2222233344555677888889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhc
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKR 312 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~ 312 (315)
.+.+.++...|...++.+++.|+.+.+.++..|.++++.++.+.||.+++..||+|..+++.|+.+-...++
T Consensus 245 ~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~ 316 (327)
T KOG1581|consen 245 LLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK 316 (327)
T ss_pred HHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987664443
No 18
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=4.9e-21 Score=164.82 Aligned_cols=245 Identities=7% Similarity=-0.013 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCc----ccc-CChhhhHHHHHHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAP----IQH-LKSQKQFFKISALG 91 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~-~~~~~~~~~~l~~~ 91 (315)
......++|...+ ...|. ..+ ++ |.++.++|.+.+.+++.++....++++ +.+ ..+++.+......+
T Consensus 6 ~~i~a~~~wg~~~----~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 6 VSLLASFLFGYMY----YYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred HHHHHHHHHHHHH----HHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 3444555565544 46787 444 67 999999999999988777654333211 111 11222234456677
Q ss_pred HHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHH
Q 021266 92 IIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCIS 171 (315)
Q Consensus 92 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 171 (315)
++...+..+.+.|++++++++++++.++.|+++++++++++|||+++++|.++.++++|+.++..++.+.. ..+++
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~ 153 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALV 153 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHH
Confidence 77888999999999999999999999999999999999999999999999999999999998764432222 35788
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 021266 172 ATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVN 251 (315)
Q Consensus 172 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (315)
+++++|.|.+..|+.. ++ +..+..... ....+...+.... +++... ........|..++..++.+...+
T Consensus 154 aa~~~a~~~i~~~~~~---~~--~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~l~~~g~~t~i~~ 222 (256)
T TIGR00688 154 LAFSFTAYGLIRKALK---NT--DLAGFCLET-LSLMPVAIYYLLQ-TDFATV----QQTNPFPIWLLLVLAGLITGTPL 222 (256)
T ss_pred HHHHHHHHHHHHhhcC---CC--CcchHHHHH-HHHHHHHHHHHHH-hccCcc----cccCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999873 22 222222111 1111111111111 111100 00011124566666677777778
Q ss_pred HHHHHHHhcCchhhHHHhhhhhhHhhhhhhhee
Q 021266 252 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILI 284 (315)
Q Consensus 252 ~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~ 284 (315)
.+...++++.++...++..+++|+++.+++.+.
T Consensus 223 ~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 223 LAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999988753
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=9.7e-20 Score=159.45 Aligned_cols=261 Identities=19% Similarity=0.229 Sum_probs=191.0
Q ss_pred HHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhH
Q 021266 33 ILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSF 112 (315)
Q Consensus 33 ~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 112 (315)
....|...++ ...+......|...+......... .+..++ ....++.++..+..++.......+.+.++++++++.
T Consensus 23 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (292)
T COG0697 23 FIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGL-RPALRPWLLLLLLALLGLALPFLLLFLALKYTSASV 98 (292)
T ss_pred HHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhcccc-cccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 3445555544 232566666699888888444433 211111 111222344555566677889999999999999999
Q ss_pred HHHHhhhhHHHHHHHHH-HHhccccCcchhhhhhhhhhhhhhhccccCccc---HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021266 113 NQAVGATTPFFTAVFAY-LMTLKREGWLTYVTLVPVVTGVIIASGGEPSFH---LFGFIMCISATAARALKTVLQGILLS 188 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~v~~k~~~~ 188 (315)
++++.++.|+++.+++. +++|||++++++.++.+++.|+.++..++...+ ..|+.+.+.+++++|++.+..|+..
T Consensus 99 ~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~- 177 (292)
T COG0697 99 ASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS- 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999997 667999999999999999999999988765443 5899999999999999999999873
Q ss_pred cCCCCCChHHHHH-HHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHHhcCchhhH
Q 021266 189 SEGEKLNSMNLLM-YMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAY-FVNLTNFLVTKHTSALTL 266 (315)
Q Consensus 189 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~ 266 (315)
+.++..... +..........+. ..+... ...+...+..+...++++. ..+.+.+..+++.++...
T Consensus 178 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 178 ----RLGPVTLALLLQLLLALLLLLLF--FLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHH--Hhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 445666555 3333111111221 111111 1122334555666666666 457777889999999999
Q ss_pred HHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 267 QVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 267 s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
+...+++|+.+.+++++++||+++..+++|.++++.|+.+.+..+
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~ 289 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRA 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999988663
No 20
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=2.3e-23 Score=170.48 Aligned_cols=294 Identities=19% Similarity=0.269 Sum_probs=246.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--cCCChhHHHHHHHHHHHHHHHHHHHHHhccCcc----cc-CChhhhHHHHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSS--YGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPI----QH-LKSQKQFFKISA 89 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~-~~~~~~~~~~l~ 89 (315)
+.......+...++.+.+.||++++. ...+.|.++++.|-++...+.....+..++.+. ++ ..+-+..+..++
T Consensus 28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlp 107 (347)
T KOG1442|consen 28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLP 107 (347)
T ss_pred chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcc
Confidence 34456677788899999999999987 446679999999998777666655442222211 11 134566788999
Q ss_pred HHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc---CcccHHHH
Q 021266 90 LGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE---PSFHLFGF 166 (315)
Q Consensus 90 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~ 166 (315)
.++.+.+...+.+.+++|++++.+++-+++..+|+.+++++++|+|-+.....+.++++.|-.+-+..| .+..+.|.
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gv 187 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGV 187 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999988877666 45678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHH
Q 021266 167 IMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSL 246 (315)
Q Consensus 167 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 246 (315)
++++.|+++-|+..++.||.. ...+...+.+++|+++.+++.++|...+.++.+ +.......+...+|.++.++|++
T Consensus 188 ifGVlaSl~vAlnaiytkk~l--~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~-~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVL--PPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQ-AVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred HHHHHHHHHHHHHHHhhheec--ccccCeehhhHHHHHHHHHHHHHHHHHHcchHH-HHcCcccchHHHHHHHHHHHHHH
Confidence 999999999999999999887 334556899999999999999999877654332 21222233456789999999999
Q ss_pred HHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhcc
Q 021266 247 AYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQ 313 (315)
Q Consensus 247 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~ 313 (315)
++..++...+.+|.++|+++.+-...+.....+++..+++|..+..-|-|-.+++.|...|.+.|++
T Consensus 265 gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~ 331 (347)
T KOG1442|consen 265 GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH 331 (347)
T ss_pred HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876543
No 21
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=3.2e-19 Score=144.92 Aligned_cols=250 Identities=15% Similarity=0.097 Sum_probs=202.4
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHH
Q 021266 34 LLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFN 113 (315)
Q Consensus 34 ~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~ 113 (315)
-+.|.++...| |.-.++.|...+.+++..+++..++ ..++++++..+..|......|.++|.+++.+|.+.+
T Consensus 29 s~Ak~LFP~vG---~~g~t~lRl~~aaLIll~l~RPwr~-----r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiA 100 (292)
T COG5006 29 SFAKSLFPLVG---AAGVTALRLAIAALILLALFRPWRR-----RLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIA 100 (292)
T ss_pred HHHHHHccccC---hhhHHHHHHHHHHHHHHHHhhHHHh-----ccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 36788888755 9999999999999999999874332 236788889999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc---CcccHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 021266 114 QAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE---PSFHLFGFIMCISATAARALKTVLQGILLSSE 190 (315)
Q Consensus 114 ~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~ 190 (315)
..+.++-|+.+.+++. -+.+....+.+.+.|..++...+ .+.|..|..++++++.||+.|.+..||.-
T Consensus 101 VAiEF~GPL~vA~~~s------Rr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g--- 171 (292)
T COG5006 101 VAIEFTGPLAVALLSS------RRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG--- 171 (292)
T ss_pred hhhhhccHHHHHHHhc------cchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc---
Confidence 9999999999888773 45567777788888988775332 56688999999999999999999999974
Q ss_pred CCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHH-HHHHHHHHhcCchhhHHHh
Q 021266 191 GEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFV-NLTNFLVTKHTSALTLQVL 269 (315)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~a~~~s~~ 269 (315)
+..+...-+...+..+.++.+|+..-..++.+ .++.....-+..++++... +.+-...+++.++.+++..
T Consensus 172 -~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--------~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~L 242 (292)
T COG5006 172 -RAEHGTAGVAVGMLVAALIVLPIGAAQAGPAL--------FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTL 242 (292)
T ss_pred -ccCCCchHHHHHHHHHHHHHhhhhhhhcchhh--------cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHH
Confidence 34567777888888888888888765433322 2334445555556665544 4445677999999999999
Q ss_pred hhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 270 GNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 270 ~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
.+++|.++.+.|++++||.+|..||+|+..++.+..-...
T Consensus 243 lSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 243 LSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999998875554
No 22
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.84 E-value=4.1e-18 Score=142.19 Aligned_cols=276 Identities=14% Similarity=0.118 Sum_probs=214.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCcccc--CChhhhHHHHHHHH
Q 021266 14 GSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQH--LKSQKQFFKISALG 91 (315)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ 91 (315)
+.......-++|.. .....|.+- . .| +..+...|.+-+...+.......|+.+.-+ .++++.+......+
T Consensus 8 Gil~~l~Ay~lwG~----lp~y~kll~-~--~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 8 GILLALLAYLLWGL----LPLYFKLLE-P--LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred hhHHHHHHHHHHHH----HHHHHHHHc-c--CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 33444444455543 444666544 3 56 899999999988888777766554433211 12334455556667
Q ss_pred HHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcccHHHHHHHHH
Q 021266 92 IIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSFHLFGFIMCIS 171 (315)
Q Consensus 92 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 171 (315)
.....+.....+|.++..+-++++-...+|++..+++.+++|||+++.||++++++.+||.......++.++....+++
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~- 158 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALAL- 158 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH-
Confidence 7778888999999999999999999999999999999999999999999999999999999888888888877666554
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 021266 172 ATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVN 251 (315)
Q Consensus 172 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (315)
+++.|....|+ .++|+.+-.......-.+..+......++... .....+...+.+++..|.++..--
T Consensus 159 ---sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL 225 (293)
T COG2962 159 ---SFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPL 225 (293)
T ss_pred ---HHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHH
Confidence 89999998776 45678877777777666666655555544331 112234567888889999888777
Q ss_pred HHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 252 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 252 ~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
.+...+-++.+-.+.++..+++|....+.+.+++||+++..+....+.+..|+.+|..+.
T Consensus 226 ~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 226 LLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 777778999999999999999999999999999999999999999999999999998543
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.84 E-value=1.6e-19 Score=152.77 Aligned_cols=215 Identities=19% Similarity=0.234 Sum_probs=176.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccC
Q 021266 80 SQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEP 159 (315)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 159 (315)
++++...+...++++..++.+.+.+++++++++++++..+..+++++++++++|+|++++||.++.+.++|+.++..++.
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 34445566667999999999999999999999999999999999999999999999999999999999999998853211
Q ss_pred -----------------cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchh
Q 021266 160 -----------------SFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDV 222 (315)
Q Consensus 160 -----------------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (315)
.....|....+.+++++++..++.||.+ |+++.+.+.........+.+..++.....+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~l--K~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLL--KRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 1236899999999999999999999999 556678888888888888888877655544433
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHH
Q 021266 223 VGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLT 300 (315)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li 300 (315)
..+......++...|..+...++.|.... ..+|+.+...-+....+..+.+.+.++.+||.++|....+|..++
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 22222223445556666666676666655 678999999999999999999999999999999999999998753
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=8.8e-20 Score=146.49 Aligned_cols=256 Identities=16% Similarity=0.254 Sum_probs=205.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHH
Q 021266 45 FKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFT 124 (315)
Q Consensus 45 ~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~ 124 (315)
|.+...+.+.|-....+..=+... . +++.+. ++.+-+.....+..+.+..+..|.|+||+|-++..+-+++.|+-+
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~-i--r~~~~~-D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV 125 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFL-I--RKKTEI-DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV 125 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhhee-e--cccccc-cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence 555677777777766665544332 1 221122 223334555678889999999999999999999999999999999
Q ss_pred HHHHHHHhccccCcchhhhhhhhhhhhhhhcccc-------CcccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChH
Q 021266 125 AVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE-------PSFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSM 197 (315)
Q Consensus 125 ~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~ 197 (315)
++++..+.+++.+|++++++..++.|+++....+ .+....|-++.+.+--..+.....++|+. +...-+..
T Consensus 126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrir--a~yq~~g~ 203 (337)
T KOG1580|consen 126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIR--ASYQRTGT 203 (337)
T ss_pred eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHH--HhhccCch
Confidence 9999999999999999999999999999886543 23346899999999999999999999987 44555788
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhh
Q 021266 198 NLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 277 (315)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~ 277 (315)
+++++.++.+.+.+-....+. ++.++ +.......+..++-+.+.++.+.+.+.+.|..+...||.+.|++...+..++
T Consensus 204 ~MM~~~NlwStL~Lg~g~lfT-GElwe-F~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 204 SMMFYTNLWSTLYLGAGLLFT-GELWE-FFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred hhHHHHHHHHHHHhhhhheeh-hhHHH-HHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 999999999988776544443 32222 2233445667788888889999999999999999999999999999999999
Q ss_pred hhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 278 VVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 278 ~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
++.+.++|+++++++||+|..+++.+...=.
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999999886543
No 25
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.82 E-value=9.5e-18 Score=143.92 Aligned_cols=290 Identities=15% Similarity=0.171 Sum_probs=223.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-hHHHHHHHHHHHHHHHHHHHHHhc-c--Ccccc------CChhhhHHH
Q 021266 17 FTLGLITIWYSSNIGVILLNKYLLSSYGFKY-PIFLTLCHMMACSLLSYVAVAWLK-V--APIQH------LKSQKQFFK 86 (315)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~-~--~~~~~------~~~~~~~~~ 86 (315)
...........-..++....|+.-++.+.++ |....+.--+.-.++......... . ++..+ ...+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3334445555566777778888877654443 777777666665555555444221 1 11111 112323445
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc--------
Q 021266 87 ISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE-------- 158 (315)
Q Consensus 87 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------- 158 (315)
..+.++.+++++.+.+.++.+.+++++++...+....+++++.++++||++++||.++.+.+.|+.++..+.
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 555688999988899999999999999999999999999999999999999999999999999999996211
Q ss_pred ---CcccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhH
Q 021266 159 ---PSFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVE 235 (315)
Q Consensus 159 ---~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (315)
.+..+.|....+.+.+++++..++.||++ |+.+.+.+....-...++.++........|+...........++..
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~ 252 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSI 252 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHH
Confidence 23357999999999999999999999999 6677788888888888888887766555555444311123456677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhc
Q 021266 236 FLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKR 312 (315)
Q Consensus 236 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~ 312 (315)
.|..++..++-|.... ..+++.+....+....+..+++.+.++.++|-++|....+|..+++.++.+|+..+.
T Consensus 253 vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 253 VWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 7888888888777777 668999999999999999999999999999999999999999999999999985544
No 26
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.81 E-value=3.1e-17 Score=143.27 Aligned_cols=263 Identities=16% Similarity=0.195 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLS 97 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 97 (315)
....+++|....+ ..|++. +++.++.. |...+.+++..+....+. ++ ...++.+..-...|+....+
T Consensus 6 ~lia~~~wGs~g~----~~k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~~-~~--~~~~~~~~~g~l~G~~w~ig 72 (290)
T TIGR00776 6 ALIPALFWGSFVL----INVKIG---GGPYSQTL---GTTFGALILSIAIAIFVL-PE--FWALSIFLVGLLSGAFWALG 72 (290)
T ss_pred HHHHHHHHhhhHH----HHhccC---CCHHHHHH---HHHHHHHHHHHHHHHHhC-Cc--ccccHHHHHHHHHHHHHHhh
Confidence 3444556655443 456554 46634332 666677666655443332 21 12344555566677778999
Q ss_pred HHhhhhhcccchhhHHHHHhh-hhHHHHHHHHHHHhccccCcch----hhhhhhhhhhhhhhccccCc-------cc-HH
Q 021266 98 VVGGNVSLKYLPVSFNQAVGA-TTPFFTAVFAYLMTLKREGWLT----YVTLVPVVTGVIIASGGEPS-------FH-LF 164 (315)
Q Consensus 98 ~~~~~~al~~~~~~~~~~l~~-~~pi~~~lls~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~ 164 (315)
+.+++.+.++++.+.+..+.+ +.|+++.+.+.+++||+.++++ +.++++.++|+.++...+.+ .+ ..
T Consensus 73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~ 152 (290)
T TIGR00776 73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKK 152 (290)
T ss_pred hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhh
Confidence 999999999999999999988 8899999999999999999999 99999999999988653211 22 68
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhH---HHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAP---VAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLM 241 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (315)
|+.+++.++++++.|.+..|+. +.||.+.++.+.. .+.....+.. .+..+. .+...+..++
T Consensus 153 Gi~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~--------~~~~~~~~~~ 216 (290)
T TIGR00776 153 GILLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAKPL--------KKYAILLNIL 216 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH--hcccch--------HHHHHHHHHH
Confidence 9999999999999999999974 2578777444443 3333222221 111100 1122333333
Q ss_pred HHHHHHHHHHHHHHHHHh-cCchhhHHHhhhhhhHhhhhhhheeeccccccccc----chhHHHHHHHHHhhhh
Q 021266 242 FNSSLAYFVNLTNFLVTK-HTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM----AGYTLTVIGVILYNEA 310 (315)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~-~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~----~G~~li~~g~~~~~~~ 310 (315)
.|+.....+.+++...+ +.++...++..+.+|+.+.+++++++||+.++.++ +|.++++.|+.+....
T Consensus 217 -~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 217 -PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred -HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 77776666777778888 99999999999999999999999999999999999 9999999999876543
No 27
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.80 E-value=7.6e-18 Score=138.76 Aligned_cols=284 Identities=18% Similarity=0.113 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----cCCChhHHHHHHHHHHHHHHHHHHHHHhcc--Cc--cc-------cCChhhhHHH
Q 021266 23 TIWYSSNIGVILLNKYLLSS-----YGFKYPIFLTLCHMMACSLLSYVAVAWLKV--AP--IQ-------HLKSQKQFFK 86 (315)
Q Consensus 23 ~~~~~~~~~~~~~~k~~~~~-----~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~--~~--~~-------~~~~~~~~~~ 86 (315)
.+...++...++..|+.=+. -++++|+..+...++.-.+|+..+.....+ ++ .. ...++-+...
T Consensus 9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l 88 (372)
T KOG3912|consen 9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL 88 (372)
T ss_pred hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence 44455666677888887442 347789999999999887777766542211 11 00 0111222344
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc--------
Q 021266 87 ISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE-------- 158 (315)
Q Consensus 87 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------- 158 (315)
.++.+++...+..+.|.|+.+++++.+|+++....+|+.+++..+++++++.+||+++....+|++.+...|
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~ 168 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY 168 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence 566899999999999999999999999999999999999999999999999999999999999999886543
Q ss_pred --CcccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHH----hcchh--------HH
Q 021266 159 --PSFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALI----MEKDV--------VG 224 (315)
Q Consensus 159 --~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--------~~ 224 (315)
-+....|+.+.+.+-+.-|.+.++.+|.. ++.+++|.+.+.|..+++..++..+..+ ..++. +.
T Consensus 169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l--~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e 246 (372)
T KOG3912|consen 169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQL--KKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE 246 (372)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHhhh--hhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence 23346899999999999999999999999 6688899999999999996554333332 21211 11
Q ss_pred HHHH---hhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHH
Q 021266 225 ITIA---LARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTV 301 (315)
Q Consensus 225 ~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~ 301 (315)
++.. .....+.....+....+...++|+.-....+..++++-.+...+|.....+++.....|.+...|+.|.++..
T Consensus 247 D~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi 326 (372)
T KOG3912|consen 247 DWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILI 326 (372)
T ss_pred hHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1111222222222233333366777777889999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 021266 302 IGVILYN 308 (315)
Q Consensus 302 ~g~~~~~ 308 (315)
.|..+|+
T Consensus 327 ~Gi~lY~ 333 (372)
T KOG3912|consen 327 MGIILYN 333 (372)
T ss_pred HHHHHHH
Confidence 9999997
No 28
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.79 E-value=7.1e-21 Score=155.50 Aligned_cols=267 Identities=13% Similarity=0.161 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhc
Q 021266 26 YSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSL 105 (315)
Q Consensus 26 ~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al 105 (315)
+..+..+++..|..-+ + |..+...|.++-.+..++... ..+.+. ..++...++.+.+|+....+..+.++|+
T Consensus 47 ~ff~~~~vv~t~~~e~----~-p~e~a~~r~l~~mlit~pcli-y~~~~v--~gp~g~R~~LiLRg~mG~tgvmlmyya~ 118 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEN----D-PMELASFRLLVRMLITYPCLI-YYMQPV--IGPEGKRKWLILRGFMGFTGVMLMYYAL 118 (346)
T ss_pred HHHhhHHHhhhhhhcc----C-hhHhhhhhhhhehhhhheEEE-EEeeee--ecCCCcEEEEEeehhhhhhHHHHHHHHH
Confidence 4445555555554443 3 999999997776666665543 222221 1223333456678888888889999999
Q ss_pred ccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc-----c---------CcccHHHHHHHHH
Q 021266 106 KYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG-----E---------PSFHLFGFIMCIS 171 (315)
Q Consensus 106 ~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-----~---------~~~~~~G~~~~l~ 171 (315)
+|.+.++++++...+|.|+.+++|.++||+.++.+.++....+.|++++..+ | .+.+..|...++.
T Consensus 119 ~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~ 198 (346)
T KOG4510|consen 119 MYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAIS 198 (346)
T ss_pred hhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHH
Confidence 9999999999999999999999999999999999999999999999999643 1 1234568889999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHH
Q 021266 172 ATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVN 251 (315)
Q Consensus 172 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (315)
+++.-|.-.++.|++- ++.+....+.|..+++.+..++.....++.+++ .....+++++..|+.++..|
T Consensus 199 s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-------~cgkdr~l~~~lGvfgfigQ 267 (346)
T KOG4510|consen 199 SVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGCASIGAVQLP-------HCGKDRWLFVNLGVFGFIGQ 267 (346)
T ss_pred hHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHHhhccceecC-------ccccceEEEEEehhhhhHHH
Confidence 9999999889999885 444555556666666666555444433433332 23344677788899999999
Q ss_pred HHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 252 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 252 ~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
+...+++++-.|...++..+..-+++.++..++|||.+|.+.|.|+++++.+.++....|
T Consensus 268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 998899888888888999999999999999999999999999999999999888776544
No 29
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.78 E-value=3.1e-18 Score=146.73 Aligned_cols=225 Identities=18% Similarity=0.213 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccC----
Q 021266 84 FFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEP---- 159 (315)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---- 159 (315)
.+..+.......+.++..+.|+.+++++..+++.+++-+|+..++.++..||+++.|.+++.+.+.|+++++.+|.
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~ 238 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS 238 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence 3444444556678899999999999999999999999999999999999999999999999999999999987632
Q ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhH
Q 021266 160 ----SFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVE 235 (315)
Q Consensus 160 ----~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (315)
+....|+++++.+++.||.|.++.||...++++++|...+..+..++..+++.|...+.+....+.+. ......
T Consensus 239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~--lP~~~q 316 (416)
T KOG2765|consen 239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE--LPSSTQ 316 (416)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc--CCCCce
Confidence 34589999999999999999999999886555688999999999999999998877765433222111 111222
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 236 FLWYLMFNSSLAY-FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 236 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
...+++.++++. +--+++.+++-.++|+..++-..+....+++.+.++=|.++|+.+++|.+.++.|.+..++..
T Consensus 317 -~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 317 -FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred -eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 333444445544 557777788999999999999999999999999999999999999999999999999888654
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.74 E-value=5.3e-17 Score=128.66 Aligned_cols=145 Identities=35% Similarity=0.629 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC---CCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhh-----chhHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSE---GEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALAR-----QDVEF 236 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 236 (315)
|.++++.++++.|+++++.|+..+++ +++.++.++..|.+..+.+.+.|.....|++.......... .+...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 68899999999999999999998542 36889999999999999999999999988876443322111 14577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 237 LWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
+..++.+++.++.+|++.+.++++++|++.++.+.+|.+..++.|+++|||++|..+++|..+.+.|.++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999974
No 31
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.5e-16 Score=130.51 Aligned_cols=291 Identities=18% Similarity=0.201 Sum_probs=226.1
Q ss_pred chhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCC-hhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHH
Q 021266 13 YGSFFTLG-LITIWYSSNIGVILLNKYLLSSYGFK-YPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISAL 90 (315)
Q Consensus 13 ~~~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (315)
++++.+.+ +.......-...-..++++++..||+ +-|.++..|+++=..+.+..+. ..++ .++..+|+.....
T Consensus 38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~---k~r~iP~rtY~~l 112 (367)
T KOG1582|consen 38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQT---KRRVIPWRTYVIL 112 (367)
T ss_pred CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eecc---cceecchhHhhhh
Confidence 34554444 33444444555667899999999998 6799999999866544444332 1111 1356678888888
Q ss_pred HHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc----CcccHHHH
Q 021266 91 GIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE----PSFHLFGF 166 (315)
Q Consensus 91 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~~~G~ 166 (315)
++.-.....+.+-++.|++-++-.+.+++.-+-+++.+.++-|+|.++.++.+..+..+|.+.....| +.++..|.
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv 192 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGV 192 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeH
Confidence 88888888999999999999999999999999999999999999999999999999999999887765 34678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHH
Q 021266 167 IMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSL 246 (315)
Q Consensus 167 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 246 (315)
++.-+|-++.|.-...+++.+ +..+-+..++++|....+.+.++......++. ++.+..-...+....-..++-+..
T Consensus 193 ~mIsgALl~DA~iGNvQEk~m--~~~~~ss~EmvfySy~iG~vflf~~mvlTge~-f~a~~fcaehp~~tyGy~~~~s~~ 269 (367)
T KOG1582|consen 193 MMISGALLADAVIGNVQEKAM--KMNPASSSEMVFYSYGIGFVFLFAPMVLTGEL-FSAWTFCAEHPVRTYGYAFLFSLA 269 (367)
T ss_pred HHHHHHHHHHHHhhHHHHHHH--hhCCCCcceEEEeeecccHHHHHHHHHhcccc-hhhhHHHHhCcHhHHHHHHHHHHH
Confidence 999999999999999999998 55666889999999999998887666654432 333332222333233444445555
Q ss_pred HHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 247 AYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 247 ~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
++.........++..||..+..+...|...+++++.++|..|+|..+.-|..+++.|+++-...|
T Consensus 270 gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 270 GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 55554455566899999999999999999999999999999999999999999999999876555
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.71 E-value=9.1e-17 Score=132.23 Aligned_cols=264 Identities=19% Similarity=0.278 Sum_probs=202.8
Q ss_pred HHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhccc-chhhH
Q 021266 34 LLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKY-LPVSF 112 (315)
Q Consensus 34 ~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~-~~~~~ 112 (315)
+.-+.+.++ +-..-..+++.|+++...--++... + ....+++-+.+.+......+...+.+.|.++++ ++.+.
T Consensus 20 v~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~s--k---f~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~Pl 93 (330)
T KOG1583|consen 20 VFLELLVRN-EPGSGNLITFAQFLFIATEGLIFTS--K---FFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPL 93 (330)
T ss_pred HHHHHHHHh-CCCCeeehHHHHHHHHHHhceeeec--c---ccccCCCCchhhhheehheeeeeeeeccceeeecccceE
Confidence 344555554 2122568888998877665555431 1 111124445566666666677778999999998 79999
Q ss_pred HHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc---ccCc--------------c--cHHHHHHHHHHH
Q 021266 113 NQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG---GEPS--------------F--HLFGFIMCISAT 173 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~---~~~~--------------~--~~~G~~~~l~a~ 173 (315)
..++++..++.++++++++.|+|.+.+|+.++.+..+|+.+... +|.+ . ...|+.+...|-
T Consensus 94 HiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al 173 (330)
T KOG1583|consen 94 HIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFAL 173 (330)
T ss_pred EEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998753 1211 0 147899999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhh-----------hchhHHHHHHHH
Q 021266 174 AARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALA-----------RQDVEFLWYLMF 242 (315)
Q Consensus 174 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~ 242 (315)
+..|.-.+++|...++ .+-++-+.++|....+. |...+..++-.+++.... ..-+..|.+++.
T Consensus 174 ~~sa~mgiyqE~~Y~k--yGKh~~EalFytH~LsL----P~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~ 247 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQK--YGKHWKEALFYTHFLSL----PLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF 247 (330)
T ss_pred HHHHHHHHHHHHHHHH--hcCChHHHHHHHHHhcc----chHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH
Confidence 9999999999999843 44589999999998884 444444444333332211 124567888888
Q ss_pred HHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 243 NSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
+.+..+.+--..+....++++.+++++-.+|..++.+++.+.|++++++.+|+|.++++.|...|..
T Consensus 248 n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 248 NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8888887765566668899999999999999999999999999999999999999999999999973
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.59 E-value=5.8e-16 Score=126.11 Aligned_cols=260 Identities=13% Similarity=0.149 Sum_probs=205.0
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhh
Q 021266 32 VILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVS 111 (315)
Q Consensus 32 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 111 (315)
..+.+.++.++ +.+-|...++..+..-.++-.++... |+ + .-+..|++.++.++...=++++...|.||++.+
T Consensus 33 ~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~f-R~-~----~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmt 105 (336)
T KOG2766|consen 33 TAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLF-RR-K----YIKAKWRHYILLAFVDVEANYFVVKAYQYTSMT 105 (336)
T ss_pred chhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHh-hh-H----HHHHHHHHhhheeEEeecccEEEeeehhhcchH
Confidence 34456666555 46779999999998777777766653 22 1 245667778888888888899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc--------CcccHHHHHHHHHHHHHHHHHHHHH
Q 021266 112 FNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE--------PSFHLFGFIMCISATAARALKTVLQ 183 (315)
Q Consensus 112 ~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~~~v~~ 183 (315)
..+++..-..+-+.+++|+++|.|.++.|+.|+..+..|++++..+| ++++..|+++.+.++-+||..|+..
T Consensus 106 Si~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~E 185 (336)
T KOG2766|consen 106 SIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSE 185 (336)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccH
Confidence 99999999999999999999999999999999999999999987654 3455789999999999999999999
Q ss_pred HHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 021266 184 GILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSA 263 (315)
Q Consensus 184 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a 263 (315)
+.+. +|.|..+++....++|.++..+- ++.|..... ...++......+. ..++.+..+-..-..+|..|+
T Consensus 186 Eflv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~----tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~a 255 (336)
T KOG2766|consen 186 EFLV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVS----TLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSA 255 (336)
T ss_pred HHHH----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhcccee----eEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCc
Confidence 9987 56689999999999999888765 444443222 1122222222222 455555555555566899999
Q ss_pred hhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhh
Q 021266 264 LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
+...+--.....++.++ ..||-..++...+....+..|.++|+.+
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 99998888899999888 6678889999999999999999999744
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.38 E-value=1.2e-12 Score=110.21 Aligned_cols=194 Identities=14% Similarity=0.068 Sum_probs=129.1
Q ss_pred chhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc--------------------cc-------Cc
Q 021266 108 LPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG--------------------GE-------PS 160 (315)
Q Consensus 108 ~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~--------------------~~-------~~ 160 (315)
++.+.....++..|+++++..+...+||.+..|+++.++...|++.... ++ .+
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 3566777888888888888888888888888888888888888764211 11 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHH
Q 021266 161 FHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYL 240 (315)
Q Consensus 161 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (315)
....|....+.+.++.++..++.|+..| +++.+.+........++.+.........+.............+...|..+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILK--DGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG 159 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHccc--CCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence 3467888888999999999999999863 22223333333333333332221111111111111000112233344444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILY 307 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~ 307 (315)
+..++ .+.+..+.+++.++...++...++++.+.+++.++|||+++..+++|..+++.|+++|
T Consensus 160 ~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 160 LLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 33333 3334558899999999999999999999999999999999999999999999998765
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.31 E-value=1.9e-11 Score=89.44 Aligned_cols=123 Identities=17% Similarity=0.089 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchh
Q 021266 31 GVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPV 110 (315)
Q Consensus 31 ~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 110 (315)
...++.|.-+++ .| |.+.+..|.++....+..+....++.+.....+++.|......|+...++..+++.|++...+
T Consensus 17 L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~a 93 (140)
T COG2510 17 LTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKA 93 (140)
T ss_pred HHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCc
Confidence 345688988887 66 999999999999888888877666554433346777888888899899999999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 111 SFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 111 ~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
+...-+..++|+++.+++++++|||++.++|+|+.++++|.++++.
T Consensus 94 s~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 94 SRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred ceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 9999999999999999999999999999999999999999988753
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.30 E-value=2e-11 Score=92.96 Aligned_cols=119 Identities=21% Similarity=0.395 Sum_probs=96.0
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHH-HHHHHHhhhhhcccchh
Q 021266 32 VILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGII-FCLSVVGGNVSLKYLPV 110 (315)
Q Consensus 32 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~ 110 (315)
....+|...++ +| |...+.+|+..+.+ +.+.....++++ .+..+++++...+..+.. ...++.+.+.++++.++
T Consensus 6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 80 (126)
T PF00892_consen 6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISA 80 (126)
T ss_pred HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence 35678988887 66 99999999999997 444443333332 222345555556656665 58899999999999999
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 111 SFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 111 ~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
+.++.+..++|+++.+++++++||+++++++.++++++.|+.++.
T Consensus 81 ~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 81 SIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998764
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.24 E-value=3.2e-11 Score=88.29 Aligned_cols=135 Identities=23% Similarity=0.246 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNS 244 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 244 (315)
..++++.+++++++..++.|--. +++||...+...+....+++.......+..+.. ...++..|..++++|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHH
Confidence 46789999999999999999865 677899888888888887777666555443322 223556788889999
Q ss_pred HHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 245 SLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
+.+....+++|++++.-.+.......-..++++.+++++++||++|..+++|..++..|.++.+
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9888889999999999999999999999999999999999999999999999999999987654
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.24 E-value=3.9e-11 Score=89.77 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHhccCccc-cCChhhhHHHHHHHHHHHH-HHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHH
Q 021266 53 LCHMMACSLLSYVAVAWLKVAPIQ-HLKSQKQFFKISALGIIFC-LSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYL 130 (315)
Q Consensus 53 ~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~ 130 (315)
.+|+..+.+++..+....++.++. +..+++++...+..+.... .++.+.+.|+++.+ +.++.+.+++|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 578888888888777644332211 1123344556666666654 88999999999999 58889999999999999999
Q ss_pred HhccccCcchhhhhhhhhhhhhhhccccCc
Q 021266 131 MTLKREGWLTYVTLVPVVTGVIIASGGEPS 160 (315)
Q Consensus 131 ~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~ 160 (315)
++|||++++++.+++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999877654
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.22 E-value=1.6e-11 Score=96.62 Aligned_cols=220 Identities=14% Similarity=0.119 Sum_probs=158.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc--Cc
Q 021266 83 QFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE--PS 160 (315)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--~~ 160 (315)
...+..|.+++....++.+..|++.++++.++.+..++-.|+.+++++.+|+|+...++++.++++.|++++...| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 3445566677778888999999999999999999999999999999999999999999999999999999998654 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHH---H-HHHHHH-HhcchhHHHHHHhhhchhH
Q 021266 161 FHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAI---F-LLPAAL-IMEKDVVGITIALARQDVE 235 (315)
Q Consensus 161 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (315)
..+.|+..++++++..|+|-+..|+..++ .+. -+...+++..+.. + ..|... .+.+. +++.... ..
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGn--An~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsFA---~~ 202 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGN--ANF--GDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSFA---AA 202 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhcc--Ccc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHHh---hC
Confidence 56899999999999999999999999833 222 2222333333322 1 122211 11111 1111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 236 FLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 236 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
.|--+...+......|+....++....|...|+-+.....-....+.++-+-..+.....|.+++..|..+....+
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 1333444444444556665577888888888888877777778888887666788899999999999998775443
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.15 E-value=1.2e-10 Score=88.51 Aligned_cols=124 Identities=23% Similarity=0.320 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHH-HHHHHH
Q 021266 174 AARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSL-AYFVNL 252 (315)
Q Consensus 174 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 252 (315)
++||.+.+..|+.. ++.|+.....+....+.+ ..+.....+..+ ....+...+......+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHH
Confidence 46889999999987 458999999999999987 666665554432 112233334444555555 466677
Q ss_pred HHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 253 TNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 253 ~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
+.+.++++.++...+...+++|+++.++++++++|+++..+++|.++++.|+.+..
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999998764
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.04 E-value=1.1e-07 Score=80.62 Aligned_cols=238 Identities=17% Similarity=0.176 Sum_probs=170.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCccccCC-hhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHH
Q 021266 48 PIFLTLCHMMACSLLSYVAVAWLKVAPIQHLK-SQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTA 125 (315)
Q Consensus 48 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ 125 (315)
|.....-..+.+.++-....... ++ ... +...+...+..|++.+.++..++.++++..++.+.=+. ...-+.+.
T Consensus 12 ~~~Q~lG~t~Gali~alv~~~~~--~p--~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~s 87 (269)
T PF06800_consen 12 PANQILGTTIGALIFALVVFLFR--QP--AFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTS 87 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHH
Confidence 44444444444444444444321 11 111 34667777888999999999999999999888877665 45677789
Q ss_pred HHHHHHhccccCcchhh----hhhhhhhhhhhhccccCc--------ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 021266 126 VFAYLMTLKREGWLTYV----TLVPVVTGVIIASGGEPS--------FHLFGFIMCISATAARALKTVLQGILLSSEGEK 193 (315)
Q Consensus 126 lls~~~~~e~~~~~~~~----~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~ 193 (315)
+.+.++++|-.+..++. ++++.++|+.+.+..|.+ ....|....+++.+.|..|.+..|. .+
T Consensus 88 l~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~------~~ 161 (269)
T PF06800_consen 88 LIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA------FH 161 (269)
T ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh------cC
Confidence 99999999998877755 888889999988765421 2356999999999999999999775 35
Q ss_pred CChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhh
Q 021266 194 LNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAK 273 (315)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~ 273 (315)
.|+++...-+.+--.+....+....+....+ ...+.-+..|++-...|++++...++.|..+.=.+....
T Consensus 162 ~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~----------k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~ 231 (269)
T PF06800_consen 162 VSGWSAFLPQAIGMLIGAFIFNLFSKKPFFE----------KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLG 231 (269)
T ss_pred CChhHhHHHHHHHHHHHHHHHhhcccccccc----------cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHH
Confidence 6888887776654443333333322111111 112233667777778888888889999999988999999
Q ss_pred hHhhhhhhheeeccccccc----ccchhHHHHHHHH
Q 021266 274 GAVAVVVSILIFRNPVSVT----GMAGYTLTVIGVI 305 (315)
Q Consensus 274 ~~~~~~~~~~~~ge~ls~~----~~~G~~li~~g~~ 305 (315)
.+++.+.|.+++||+-+.. .++|.++++.|..
T Consensus 232 vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 232 VVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 9999999999999987765 4567777777765
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.99 E-value=1.7e-08 Score=88.71 Aligned_cols=142 Identities=11% Similarity=0.036 Sum_probs=109.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHH
Q 021266 159 PSFHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLW 238 (315)
Q Consensus 159 ~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (315)
.+....|..+.+.++++|+...+..|.. ++++|.++.++...++.+.+.+......+.+.. .. ...+...+.
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~--~~-~~~~~~~~~ 74 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWSYL--KT-LIQTPQKIF 74 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHH--HH-HHcCHHHHH
Confidence 3445689999999999999999999864 458999999999999988777665443221110 00 001222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 239 YLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 239 ~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
.....+......+.+.+++++++++...++..+..|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 3344555555667788899999999999999999999999999999999999999999999999998764
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.98 E-value=1.6e-08 Score=86.97 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhH-HHHHHhhhchhHHHHHHHH
Q 021266 164 FGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVV-GITIALARQDVEFLWYLMF 242 (315)
Q Consensus 164 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 242 (315)
.|..+.++++++|+...+..|.. .+++|.++.++...++.+.+.+.......... ...... ......+..+..
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-----~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-----KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKR-IQKRPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhC-cccchHHHHHHH
Confidence 48899999999999999999974 34899999999999998887765544322111 001110 011223445566
Q ss_pred HHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 243 NSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
.++.....+.+.+.+++++++.++++..+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 676666777888899999999999999999999999999999999999999999999999988653
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.87 E-value=9.7e-08 Score=82.27 Aligned_cols=130 Identities=17% Similarity=0.044 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHH-HHH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGII-FCL 96 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 96 (315)
.....++...+........|+..++.+.+ +.....+++..+.+++.+.....+. + .. .+.+.+...+..+.. ...
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-N-PQ-ALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-C-CC-cchHHHHHHHHHHHHHHHH
Confidence 33334444444444556788888764322 4555557888888888777653222 1 11 234455555555554 467
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhh
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGV 151 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv 151 (315)
+..+++.++++.+++.++.+..++|+++.+++++++||+++..++.|..+.+.|+
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999999999999999999999999999886
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.87 E-value=3.1e-08 Score=86.46 Aligned_cols=133 Identities=13% Similarity=0.144 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHH
Q 021266 166 FIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSS 245 (315)
Q Consensus 166 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 245 (315)
..+.+.+++++|.+.+..|+.. ++.++. ..+....+.+...|......... .+...+...+..++..+.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~----~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA----DKEPDF--LWWALLAHSVLLTPYGLWYLAQV-----GWSRLPATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC----CchhHH--HHHHHHHHHHHHHHHHHHhcccC-----CCCCcchhhHHHHHHHHH
Confidence 5678999999999999999875 222343 35555556666666554321110 011122334556666777
Q ss_pred HHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 246 LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 246 ~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
....++.+.+.+.++.++...+.+.+..|+++.+++++++||+++..+++|..+++.|+.+...
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 7778888888999999999999999999999999999999999999999999999999987653
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.72 E-value=2.5e-07 Score=83.02 Aligned_cols=137 Identities=17% Similarity=0.236 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHH
Q 021266 164 FGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFN 243 (315)
Q Consensus 164 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (315)
.-...++...++++...++.|... +..++|....++...++.+.++|+....+..... ...+...+..+...
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~---~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~-----~~~~~~~~~~l~l~ 84 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVAT---SKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL-----PPLSVSILSKIGLL 84 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH---HCCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcchHHHHHHHHHH
Confidence 446777888999999999999997 5788999999999999999998887665322110 11122335555666
Q ss_pred HHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhhee------ecccccccccchhHHHHHHHHHhh
Q 021266 244 SSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILI------FRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~------~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
|+++..++.+.+.+++++++..+++..+..|+++.++++++ ++|+++..+++|.++.+.|+.+..
T Consensus 85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 76665566677889999999999999999999999999999 699999999999999999998754
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.66 E-value=1.1e-07 Score=83.15 Aligned_cols=214 Identities=13% Similarity=0.130 Sum_probs=120.2
Q ss_pred HHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc---Cc-cc-----
Q 021266 92 IIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE---PS-FH----- 162 (315)
Q Consensus 92 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~-~~----- 162 (315)
..+.++..+.+.|+.+.|.+..+-+.+..-++..+++..++|||++++++.|..+++.|..++.... .+ .+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 4567788999999999999999999999999999999999999999999999999999998764221 11 10
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHH--Hhhhch
Q 021266 163 -------LFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITI--ALARQD 233 (315)
Q Consensus 163 -------~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 233 (315)
..-....... ++..+.....+|.. +. +...........+..-.+ ..-..+. ...... +....+
T Consensus 138 ~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g---~~--~i~vyi~i~sl~Gs~tvl-~~K~i~~-~i~~~~~g~~~f~~ 209 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLV-LILILIFFIKPRYG---RR--NILVYISICSLIGSFTVL-SAKAISI-LIKLTFSGDNQFTY 209 (300)
T ss_pred HHhcCcceehhHHHHHH-HHHHHHHhhcchhc---cc--ceEEEEEEeccccchhhh-HHHHHHH-HHHHHhcCchhhhh
Confidence 0111111111 11111111122211 11 111101111111111100 0000000 000000 001122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhh-hhHhhhhhhheeeccc--ccc----cccchhHHHHHHHHH
Q 021266 234 VEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSILIFRNP--VSV----TGMAGYTLTVIGVIL 306 (315)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~~~~~~~~~~~~ge~--ls~----~~~~G~~li~~g~~~ 306 (315)
+..|..++....+....-.....++++.+++....+.+. -...+++-|.++|+|- .+. ....|..+++.|+++
T Consensus 210 ~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~l 289 (300)
T PF05653_consen 210 PLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFL 289 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhe
Confidence 333444433333333333345578999988776665555 5667788888999974 444 356788888999988
Q ss_pred hhhhhcc
Q 021266 307 YNEAKRQ 313 (315)
Q Consensus 307 ~~~~~~~ 313 (315)
.+..|+.
T Consensus 290 L~~~~~~ 296 (300)
T PF05653_consen 290 LSSSKDK 296 (300)
T ss_pred eeccCch
Confidence 8765543
No 48
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.54 E-value=4.2e-06 Score=65.95 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-----cCCChhHHHHHHHHHHHHHHHHHHHHHhccCcccc-----CC-----hhhhHHH
Q 021266 22 ITIWYSSNIGVILLNKYLLSS-----YGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQH-----LK-----SQKQFFK 86 (315)
Q Consensus 22 ~~~~~~~~~~~~~~~k~~~~~-----~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-----~~-----~~~~~~~ 86 (315)
++..........+..|..+++ .+.+ |..+.......+.+.+.+........+..+ .. ..+.+..
T Consensus 5 ~l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (153)
T PF03151_consen 5 ALASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFL 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHH
Confidence 344444455556677888877 4566 888888888888888887765443322111 00 2234455
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 87 ISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 87 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
.+..++.....+...+..++++++-+.+++.....+.+.++++++++|+++..++.|+.+++.|+.+.
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 55566677788999999999999999999999999999999999999999999999999999998764
No 49
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.53 E-value=1.3e-06 Score=64.72 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=60.5
Q ss_pred HHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 92 IIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 92 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
+++.....+...+++..|.+.+..+-++.|+++.+++++++|||++++|++++.+++.|++++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 45677899999999999999999999999999999999999999999999999999999987653
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.49 E-value=4.4e-06 Score=73.34 Aligned_cols=109 Identities=11% Similarity=0.166 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHH-HHHHHHhhhhhcccchhhHHHHHhhhhHHHHHH
Q 021266 48 PIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGII-FCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAV 126 (315)
Q Consensus 48 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 126 (315)
+...+.++...+.+.+.+....... +.....+.+.+...+..++. ......+++.++++.+++.++++..++|++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i 255 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL 255 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 5566778888777777666542221 11111233445555555654 456888999999999999999999999999999
Q ss_pred HHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 127 FAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 127 ls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
++++++||+++..+++|..+.+.|+.+....
T Consensus 256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887644
No 51
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.48 E-value=6.3e-06 Score=72.39 Aligned_cols=129 Identities=13% Similarity=0.030 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHH-HHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIF-CLSV 98 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 98 (315)
+..++-..+.....+..|+..++ .+ |..... ....+.+.+.+....... ....+...+...+..++.. .++.
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~~--~~-~~~~~~-~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGAE--HG-PATVAI-GSLIAALIFVPIGALQAG---EALWHWSILPLGLAVAILSTALPY 223 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CC-chHHHH-HHHHHHHHHHHHHHHccC---cccCCHHHHHHHHHHHHHHHHHHH
Confidence 33333344444456677877655 44 666544 445555555554432211 1112333333334455543 5678
Q ss_pred HhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 99 VGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 99 ~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
.+++.++++.+++.++++..++|++..++++++++|+++..+++|..+++.|+....
T Consensus 224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999988764
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.41 E-value=4.5e-06 Score=63.40 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHH
Q 021266 164 FGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFN 243 (315)
Q Consensus 164 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (315)
.|.++.+.+.++.+...++.|+-.+ + .+..+.... .. . .+ . ...+ .....+..+..+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~--~--~g~~~~~~~-~~-~---~~-~-~~~~------------p~~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS--R--LPLLSHAWD-FI-A---AL-L-AFGL------------ALRAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh--h--CCCccchhH-HH-H---HH-H-HHhc------------cHHHHHHHHHHH
Confidence 3678888999999999999998762 1 121111110 00 0 00 0 0000 000122222333
Q ss_pred HHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhhe--eecccccccccchhHHHHHHHHHhhhhhcccC
Q 021266 244 SSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSIL--IFRNPVSVTGMAGYTLTVIGVILYNEAKRQSK 315 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~--~~ge~ls~~~~~G~~li~~g~~~~~~~~~~~~ 315 (315)
++. ..++...+++.+...+..+.+..++...+.++. ++||++|..+++|.++++.|+++.++.++|+|
T Consensus 59 ~la----~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~~ 128 (129)
T PRK02971 59 ALS----MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKAR 128 (129)
T ss_pred HHH----HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 333 333447899999999998888887777777774 89999999999999999999999987766654
No 53
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.40 E-value=0.00023 Score=63.02 Aligned_cols=225 Identities=8% Similarity=0.048 Sum_probs=143.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHHHHHHHHhcccc---Cc----chhhhhhhhhhhh
Q 021266 80 SQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTAVFAYLMTLKRE---GW----LTYVTLVPVVTGV 151 (315)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lls~~~~~e~~---~~----~~~~~~~l~~~Gv 151 (315)
+...+...+..|++...++..+..+.++...+...-+. .+.-+...++..++++|=. +. .-..++++.++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 45566777778999999999999999999998887555 4677888888888888643 32 2467888888999
Q ss_pred hhhcc----ccC---------cccHHHHHHHHHHHHHHHHHH-------HHHHHHhccCCCCCChHHHHHHHhH---HHH
Q 021266 152 IIASG----GEP---------SFHLFGFIMCISATAARALKT-------VLQGILLSSEGEKLNSMNLLMYMAP---VAA 208 (315)
Q Consensus 152 ~l~~~----~~~---------~~~~~G~~~~l~a~~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~~~---~~~ 208 (315)
++.+. .|. .....|..+++.+.+.+++|+ ...+... ..+.++.....-+.. .+.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~---~~g~~~~~~~lp~~~~~~~G~ 225 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA---ALGVDPLYAALPSYVVIMGGG 225 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh---hcCCCchHHHHHHHHHHHHHH
Confidence 98875 332 123689999999999999999 4444321 133455444333333 333
Q ss_pred HHHHHHHHHh---cchhHHHHHHhhhch----hHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHH----HhhhhhhHhh
Q 021266 209 IFLLPAALIM---EKDVVGITIALARQD----VEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQ----VLGNAKGAVA 277 (315)
Q Consensus 209 ~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s----~~~~~~~~~~ 277 (315)
+..-...... .........+ ...+ .......++.|+.-+..+..+...-++.+..... +-+...-+++
T Consensus 226 ~~~n~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viis 304 (345)
T PRK13499 226 AITNLGFCFIRLAKNKDLSLKAD-FSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCG 304 (345)
T ss_pred HHHHHHHHHHHHhhCCCcccchh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHH
Confidence 2222111111 1111110011 0011 1233444667777777777777777766443222 4446666888
Q ss_pred hhhhheeeccccc------ccccchhHHHHHHHHHhhh
Q 021266 278 VVVSILIFRNPVS------VTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 278 ~~~~~~~~ge~ls------~~~~~G~~li~~g~~~~~~ 309 (315)
.+.|.+ ++|.-+ ...++|.++++.|..+...
T Consensus 305 tlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 305 NLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 888984 999866 4578999999999887654
No 54
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.37 E-value=4.6e-06 Score=73.32 Aligned_cols=129 Identities=13% Similarity=0.077 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHH
Q 021266 164 FGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFN 243 (315)
Q Consensus 164 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (315)
.+.+..+.+.++|+...+..|... +.++|....++....+.+.+.+... .+... ... +..++..
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~----~~~~P~~~~~~R~~~a~l~l~~~~~---~~~~~------~~~---~~~~~~~ 67 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVS----ESLGPVGGAAMIYSVSGLLLLLTVG---FPRLR------QFP---KRYLLAG 67 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH----ccCChHHHHHHHHHHHHHHHHHHcc---ccccc------ccc---HHHHHHH
Confidence 457788999999999999999876 6689999999999988887776421 11111 011 1122333
Q ss_pred HHHHHHHHHHHHHHH----hcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 244 SSLAYFVNLTNFLVT----KHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~----~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
++....++.+.+... +..++...++..+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 333334444444433 45678888999999999999999999999999999999999999998764
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.37 E-value=9.5e-06 Score=68.70 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=108.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHH
Q 021266 162 HLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLM 241 (315)
Q Consensus 162 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (315)
...|+++++.|-+.|+.--.+.|-+ ++.++.++..+..+.+.++++.........+ ...+ ...++..+..+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~~r~~~--~~~~-~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFLLRQWR--ELKQ-LLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHH-HHhCcHHHHHHH
Confidence 3479999999999999999999987 6779999999999999988876665553332 2222 222344455555
Q ss_pred HHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 242 FNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
..+.....--....++..+-....+|+-.+++|++.++.|.++++|+++..|++..++...|+..-.+
T Consensus 77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 55554443333345678888899999999999999999999999999999999999999999976544
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.35 E-value=5.6e-06 Score=73.04 Aligned_cols=136 Identities=9% Similarity=-0.035 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccC--------ChhhhHHH-HHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHL--------KSQKQFFK-ISAL 90 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~-~l~~ 90 (315)
..+++...+.....+..|+..++.+.+ |..++.++...+.+.+.+........+.... ........ .+..
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA 226 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH
Confidence 334444444444566788877733356 8899999998888888877653221110000 00001111 2222
Q ss_pred HH-HHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 91 GI-IFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 91 ~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
+. ++...+.+.+.+++++++..+++.....|+++.++++++++|+++..+++|..+++.|+.+...
T Consensus 227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 22 3334446777899999999999999999999999999999999999999999999999987754
No 57
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.30 E-value=4.5e-05 Score=67.19 Aligned_cols=138 Identities=14% Similarity=0.010 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCcc---c-cCChhhhHHHHHHHHHHH-
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPI---Q-HLKSQKQFFKISALGIIF- 94 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~~~~- 94 (315)
..++.-..+.....+.+|...++.+-+.......+..+.+.+.+............ + ...+.+.+...+-.++..
T Consensus 146 ~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t 225 (299)
T PRK11453 146 MLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVAT 225 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHH
Confidence 33334444444445577776554221213344455555544433332221111100 0 112334455555555543
Q ss_pred HHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 95 CLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 95 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
.....+++.++++.+++.++.+..++|++..++++++++|+++..+++|..++++|+.+...+
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 568889999999999999999999999999999999999999999999999999999876543
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.25 E-value=2.3e-05 Score=70.57 Aligned_cols=138 Identities=15% Similarity=0.073 Sum_probs=102.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-hHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHH
Q 021266 162 HLFGFIMCISATAARALKTVLQGILLSSEGEKLN-SMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYL 240 (315)
Q Consensus 162 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (315)
++.-..+.+.--.+...+++..|... +..+ |+.+..++...+.+...+.... +..+.+. .......+..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl----~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~----~~~~~~~~~~l 117 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL----NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPR----IKSLKLFLKNF 117 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH----HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCC----CCCHHHHHHHH
Confidence 34445556666666777889999998 4467 9999999999987765544221 1110000 00012245566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
+..|+++...+...+..++.+++...+++...+|+++.++++++++|+++..+++|.++++.|+.+..
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 67777777666667788999999999999999999999999999999999999999999999998765
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.17 E-value=2.2e-05 Score=58.53 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=61.9
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhhcc
Q 021266 238 WYLMFNSSLAY-FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAKRQ 313 (315)
Q Consensus 238 ~~l~~~~~~~~-~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~~~ 313 (315)
...+..+.++. ..+...+...++.++ ..+....+.|+++.++++++++|+++..+++|.+++..|+.+....+.+
T Consensus 35 ~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 35 LWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 34455555554 556667788999995 7889999999999999999999999999999999999999988766543
No 60
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.93 E-value=3.9e-05 Score=58.31 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHH--HhccccCcchhhhhhhhhhhhhhhcccc
Q 021266 86 KISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYL--MTLKREGWLTYVTLVPVVTGVIIASGGE 158 (315)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 158 (315)
.....-+++.+...+++.+++..+.+.+.-+.+..+.++.+.++. ++||+++..|++|+.++++|+.++..++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 334344567889999999999999999999999999889888885 7999999999999999999999887543
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.90 E-value=0.00031 Score=61.51 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHH----HHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMM----ACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGII 93 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 93 (315)
...+.+.-..+-.......|.. +.+ |...+..+.. .+.++..+. + +. ++..++..+ ..+..|+.
T Consensus 153 Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~-~----~~-~~~~~~~~~-~~~~~Gi~ 220 (290)
T TIGR00776 153 GILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH-I----LA-KPLKKYAIL-LNILPGLM 220 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH-h----cc-cchHHHHHH-HHHHHHHH
Confidence 3333333334444445566654 244 7777655554 444333333 1 11 111223333 34447777
Q ss_pred HHHHHHhhhhhcc-cchhhHHHHHhhhhHHHHHHHHHHHhccccCcchh----hhhhhhhhhhhhhc
Q 021266 94 FCLSVVGGNVSLK-YLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTY----VTLVPVVTGVIIAS 155 (315)
Q Consensus 94 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~----~~~~l~~~Gv~l~~ 155 (315)
...++.+++.+.+ +.+++.+.++.+.+|+...+.+++++||+.+++|+ +|.++.+.|+.+..
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 8888899999999 99999999999999999999999999999999999 99999999988764
No 62
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=6.3e-05 Score=64.57 Aligned_cols=212 Identities=11% Similarity=0.101 Sum_probs=121.7
Q ss_pred HHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccCcc---------
Q 021266 91 GIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEPSF--------- 161 (315)
Q Consensus 91 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~--------- 161 (315)
-+.+.++....+.|+.+-|.+..+-+.+++.+..++++..++|||+++.-.+|..+++.|..+++...++.
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el 150 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV 150 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999998776532211
Q ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHH---HhcchhHHHHHHhhh
Q 021266 162 -------HLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAAL---IMEKDVVGITIALAR 231 (315)
Q Consensus 162 -------~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (315)
..+.....+.-.+ ..-....|.. + ...+++.|..+-+.+..+-... ..+.-+..-......
T Consensus 151 ~~~~~~~~Fliy~~~iil~~--~il~~~~~p~-----~--g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql 221 (335)
T KOG2922|consen 151 WELATEPGFLVYVIIIILIV--LILIFFYAPR-----Y--GQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQL 221 (335)
T ss_pred HHHhcCccHHHHHHHHHHHH--HHHheeeccc-----c--cccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccc
Confidence 1111111111111 1111222211 1 2223333333333221110000 000000000000011
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhh-hhHhhhhhhheeeccc--ccc----cccchhHHHHHHH
Q 021266 232 QDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSILIFRNP--VSV----TGMAGYTLTVIGV 304 (315)
Q Consensus 232 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~~~~~~~~~~~~ge~--ls~----~~~~G~~li~~g~ 304 (315)
..+..|..++....+....-.-...+++..++...+.+.++ -...++..|.++|.|- .+. ....|...++.|+
T Consensus 222 ~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~ 301 (335)
T KOG2922|consen 222 FYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGI 301 (335)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhee
Confidence 11233333333333333332223467888887777777766 6777888899999873 232 3677888888898
Q ss_pred HHhhhhh
Q 021266 305 ILYNEAK 311 (315)
Q Consensus 305 ~~~~~~~ 311 (315)
.+....|
T Consensus 302 flL~~~k 308 (335)
T KOG2922|consen 302 FLLHRTK 308 (335)
T ss_pred eEeeeec
Confidence 8775444
No 63
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.87 E-value=0.00053 Score=60.53 Aligned_cols=139 Identities=11% Similarity=0.046 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHH--hccCcc-cc--CChhhhHHHHHHHHH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAW--LKVAPI-QH--LKSQKQFFKISALGI 92 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~--~~~~~~-~~--~~~~~~~~~~l~~~~ 92 (315)
....+.+...........+|+++++++.+ |..........+.+...+.... .+.... .+ ...++.+...+..++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 56666777777777788999999998877 8888888888777777666553 221111 00 123345566666777
Q ss_pred HHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 93 IFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 93 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
....++.+.+.-.+..++...+++..+.-+++.+++.+++++++++.+|.|+.+.+.|..+-...
T Consensus 234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 77888888888889999999999999999999999999999999999999999999999876543
No 64
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.75 E-value=0.0015 Score=56.87 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=68.4
Q ss_pred hhhhHHHHHHHHHHHH-HHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 80 SQKQFFKISALGIIFC-LSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 80 ~~~~~~~~l~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
....+......++... ..+.+.+.+++..+++..+.+..+.|++..++++++++|+++..++.|..+.+.|+.+....
T Consensus 210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 4556666666777665 58999999999999999999999999999999999999999999999999999999877644
No 65
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.71 E-value=0.00086 Score=55.79 Aligned_cols=129 Identities=12% Similarity=0.054 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHH-HH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIF-CL 96 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 96 (315)
.+.+...-..+...+++..|++-+. -+ ...-...-+..+.++..++-.. ...+ ...++.-....+..+++. .+
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~-~ag~--~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAA-QAGP--ALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhh-hcch--hhcChHHHHHHHHHHHHhccc
Confidence 3344444445555666777777643 22 3333445566667776776642 2211 122344444555555554 45
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhh
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVI 152 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~ 152 (315)
.+.+...+++..|...+.++.+.+|.+.++.++++++|.+|..||+++...+.+..
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999998887765
No 66
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.69 E-value=1.9e-05 Score=65.11 Aligned_cols=241 Identities=15% Similarity=0.170 Sum_probs=165.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhh-hhHHHHHH
Q 021266 48 PIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGA-TTPFFTAV 126 (315)
Q Consensus 48 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~l 126 (315)
|...+.-..+.+.++....+.. . .+..+...+..-+..|++.+.++..++.|.++.+++.+.-+.+ ..-+-+.+
T Consensus 28 p~qQ~lGtT~GALifaiiv~~~--~---~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL 102 (288)
T COG4975 28 PYQQTLGTTLGALIFAIIVFLF--V---SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSL 102 (288)
T ss_pred hhHhhhhccHHHHHHHHHHhee--e---cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhcee
Confidence 7777666666666665555542 1 2223455566666788889999999999999999888876654 56777888
Q ss_pred HHHHHhccccCcch----hhhhhhhhhhhhhhccccC--------cccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 021266 127 FAYLMTLKREGWLT----YVTLVPVVTGVIIASGGEP--------SFHLFGFIMCISATAARALKTVLQGILLSSEGEKL 194 (315)
Q Consensus 127 ls~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~ 194 (315)
++.+.++|=.+..| ..++++.+.|+.+-+..|. ++.-.|....+.+.+.|-.|.++.+.. +.
T Consensus 103 ~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f------~v 176 (288)
T COG4975 103 FGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF------DV 176 (288)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc------cc
Confidence 99999999887665 3577888888888876542 223578888899999999999988764 34
Q ss_pred ChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhh
Q 021266 195 NSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKG 274 (315)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~ 274 (315)
|.+....-+..--.+..+.+....++.. .....+.-+..|+.-...|+.++...++.+-.+.=.+..+.-
T Consensus 177 ~g~saiLPqAiGMv~~ali~~~~~~~~~----------~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgV 246 (288)
T COG4975 177 DGLSAILPQAIGMVIGALILGFFKMEKR----------FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGV 246 (288)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcccccc----------hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhee
Confidence 5555554444422222222222221111 112233445677777778888888888887666656677778
Q ss_pred Hhhhhhhheeecccccccc----cchhHHHHHHHHHhhh
Q 021266 275 AVAVVVSILIFRNPVSVTG----MAGYTLTVIGVILYNE 309 (315)
Q Consensus 275 ~~~~~~~~~~~ge~ls~~~----~~G~~li~~g~~~~~~ 309 (315)
+++.+-|+++++|+-|..+ ++|.++++.|..+...
T Consensus 247 iisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 247 IISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred eeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 8899999999999988764 5677777777765543
No 67
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.68 E-value=0.00016 Score=53.50 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=51.2
Q ss_pred HHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 252 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 252 ~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
.+....+++.+...+-...++.++.+.+.|+++|||++|..+++|.++++.|+.+..
T Consensus 52 ~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 52 VLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 334477899999988888889999999999999999999999999999999998764
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.68 E-value=0.00017 Score=53.78 Aligned_cols=70 Identities=16% Similarity=0.263 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 88 SALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 88 l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
+...+++..+..+...++++.|.+.+..+- ....+.+.+.+++++||+++..|++++.+++.|+..+...
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 445667788999999999999999998885 6889999999999999999999999999999999887543
No 69
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.55 E-value=0.0014 Score=50.50 Aligned_cols=131 Identities=24% Similarity=0.366 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCC-ChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKL-NSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFN 243 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (315)
..++++.+..+-+.+.....++. ++. ||+.........+.+.........++.+.+ ...+. -++....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~---~~~~~----p~w~~lG 70 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSLA---SLSSV----PWWAYLG 70 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc---hhccC----ChHHhcc
Confidence 35678888899999999998886 333 599999999999999888777776554222 11111 2233448
Q ss_pred HHHHHHHHHHHHHHHhcCchhhHHHhhhhhhH-hhhhhhhe-ee---cccccccccchhHHHHHHHHH
Q 021266 244 SSLAYFVNLTNFLVTKHTSALTLQVLGNAKGA-VAVVVSIL-IF---RNPVSVTGMAGYTLTVIGVIL 306 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~-~~~~~~~~-~~---ge~ls~~~~~G~~li~~g~~~ 306 (315)
|+++..+-.+.....++.++...........+ .+.++|.+ .| .+++++.+++|.++++.|+++
T Consensus 71 G~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 71 GLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88888887777788999999988888877554 45667765 33 467899999999999999863
No 70
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.54 E-value=0.0013 Score=48.19 Aligned_cols=68 Identities=12% Similarity=0.023 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhHHHHHhh-hhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 87 ISALGIIFCLSVVGGNVSLKYLPVSFNQAVGA-TTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 87 ~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
.+....++..+..+...++++.|.+.+..+-. ...+.+.+.+++++||++++.|+.++.+++.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34455667788889999999999999887665 678889999999999999999999999999999865
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.54 E-value=0.00041 Score=51.09 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 89 ALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
..-+++..+..+...++++.|.+.+..+- ....+.+.+.+++++||++++.|+.++.+++.|++.+...
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34556777888889999999999998885 4788899999999999999999999999999999988543
No 72
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.48 E-value=0.0012 Score=48.14 Aligned_cols=68 Identities=18% Similarity=0.081 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhhhhhcccchhhHHHHHhh-hhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 88 SALGIIFCLSVVGGNVSLKYLPVSFNQAVGA-TTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 88 l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
+....++..+..+...++++.|.+.+..+-. ...+.+.+.+.+++||++++.|++++.+.+.|++.+.
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3445677888899999999999998877665 7788999999999999999999999999999998764
No 73
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.42 E-value=0.0024 Score=56.65 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHH
Q 021266 164 FGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFN 243 (315)
Q Consensus 164 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (315)
.+.++.-.-++|-+..++.+..+.++ +.+ -|....++....-.++..+......+.+ .+.. ....-|+..++.
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~-~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~--~~~~---~~~~~~w~y~ll 85 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANK-GVN-IPTFQSFFNYVLLALVYTPILLYRRGFK--KWLK---VLKRPWWKYFLL 85 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhc-Ccc-CcHHHHHHHHHHHHHHHhhhhhhccccc--cchh---hcchhHHHHHHH
Confidence 44455555555666666666665422 223 2555555555544445555444332211 0111 111223334445
Q ss_pred HHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 244 SSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
+++=...|.....+.+.++.+..++......+++.++++++++|+.+..|++|.++.+.|+.+...
T Consensus 86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~ 151 (334)
T PF06027_consen 86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVV 151 (334)
T ss_pred HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheee
Confidence 788888899999999999999999999999999999999999999999999999999999886653
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.0011 Score=47.97 Aligned_cols=71 Identities=18% Similarity=0.089 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhhHHHHHhh-hhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 86 KISALGIIFCLSVVGGNVSLKYLPVSFNQAVGA-TTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
..+..-+++..+..+...+++++|.+.+..+-. .-.+.+.+.+++++||+++..+++++.+.+.|++.+..
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 334455667788889999999999998876654 66888999999999999999999999999999987643
No 75
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.35 E-value=0.0053 Score=52.46 Aligned_cols=118 Identities=7% Similarity=-0.049 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHH
Q 021266 16 FFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFC 95 (315)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 95 (315)
.+.....++-......+....|.. +.+ |+....=|.+.-.+.-.++.. .. + ++..+++.++. +..|+.+.
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~~----~~~-~~~~~lPqaiGm~i~a~i~~~-~~--~-~~~~~k~~~~n-il~G~~w~ 206 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKAF----HVS-GWSAFLPQAIGMLIGAFIFNL-FS--K-KPFFEKKSWKN-ILTGLIWG 206 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc----CCC-hhHhHHHHHHHHHHHHHHHhh-cc--c-ccccccchHHh-hHHHHHHH
Confidence 344444555555555555666652 244 766666555433333333332 11 1 22223444555 45899999
Q ss_pred HHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhh
Q 021266 96 LSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVT 143 (315)
Q Consensus 96 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~ 143 (315)
.++.+...+.+....+.+-.+..+.++...+.+.+++||+-+++|+..
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~ 254 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY 254 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH
Confidence 999999999999999999999999999999999999999999987653
No 76
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.013 Score=50.20 Aligned_cols=139 Identities=8% Similarity=0.006 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccC-cccc--CChhhhHHHHHHH
Q 021266 14 GSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVA-PIQH--LKSQKQFFKISAL 90 (315)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~l~~ 90 (315)
........++.+.+.-...+..++.++++++.+ ++.+-..-.+...+.-.......+.. +... ..+++-++..+..
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 345666777777777777788889999987777 55444433333333333332212211 1100 1356778899999
Q ss_pred HHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhh
Q 021266 91 GIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVII 153 (315)
Q Consensus 91 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l 153 (315)
+++.++++.+.+.-++.-.+-+.+.+..+.=++..+++.+.++.++++.||.++...+.|..+
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 999999999999999987777788889999999999999999999999999999999888754
No 77
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.016 Score=50.92 Aligned_cols=144 Identities=17% Similarity=0.098 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcch---hHHH-HHHhhhchhHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKD---VVGI-TIALARQDVEFLWYL 240 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~l 240 (315)
-....+...+-.+......|...+.++.+..|...++..-+.-.++.......-+.. .... ........+.....+
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 345555566666666777776664455567888888888777777666544432211 1110 011111223234555
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
...+.+....|...+...++.+|++.++...++...+.+++.++++++++..||...++...|+...+
T Consensus 96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 66677777778888899999999999999999999999999999999999999999999999998876
No 78
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.07 E-value=0.0055 Score=45.11 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=46.0
Q ss_pred HHHhcCch-hhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 256 LVTKHTSA-LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 256 ~~~~~~~a-~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
.++++.+- ...++..-+..+.+.+.|+++|||++|..+++|..+++.|++..+..+
T Consensus 49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 55677663 344555667888899999999999999999999999999999987644
No 79
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.07 E-value=0.0049 Score=44.01 Aligned_cols=58 Identities=16% Similarity=0.045 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHHHHHHHHhccccCcchhhhhhhh
Q 021266 90 LGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTAVFAYLMTLKREGWLTYVTLVPV 147 (315)
Q Consensus 90 ~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lls~~~~~e~~~~~~~~~~~l~ 147 (315)
...++..+..+...++++.|.+.+..+- ....+.+.+.+..++||++|..|+.++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3446788889999999999999987654 588999999999999999999999998763
No 80
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.05 E-value=0.0013 Score=55.91 Aligned_cols=75 Identities=23% Similarity=0.204 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhh
Q 021266 236 FLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 236 ~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
........+++-...|...+.++++.+|.+..+....+.+.+.++++++++++++..||++..+...|+......
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 345666778888888999999999999999999999999999999999999999999999999999999987644
No 81
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.01 E-value=0.0016 Score=57.03 Aligned_cols=141 Identities=11% Similarity=0.062 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCChhHHHHHHHHHHHHHHHH-HHHHHhccCcc---ccCChhhhHHHHH
Q 021266 15 SFFTLGLITIWYSSNIGVILLNKYLLS--SYGFKYPIFLTLCHMMACSLLSY-VAVAWLKVAPI---QHLKSQKQFFKIS 88 (315)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~l 88 (315)
+........++......-.++.|.+++ +++.+ +..+...+.-++...+. |.......... ....+.-......
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence 466777888888888889999999995 45566 88888888888888887 76542111111 1101222233333
Q ss_pred HHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 89 ALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
..+++..+.|...+..+..+++-++++....--+.+...++.+++|+++..+..|.+++++|+.+...
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 44566667789999999999999999999999889999999999999999999999999999998753
No 82
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.98 E-value=0.035 Score=42.80 Aligned_cols=118 Identities=11% Similarity=0.092 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhh
Q 021266 32 VILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVS 111 (315)
Q Consensus 32 ~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 111 (315)
....|-.+-++.+ .|+.-+...+..+.+.+..+....+.. ..+..++.+|+.++ .|++......+.......++++
T Consensus 16 q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~ 91 (138)
T PF04657_consen 16 QAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP-SLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAA 91 (138)
T ss_pred HHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHH
Confidence 3445555655533 499999999999999998887755543 22222333444444 7888888888999999999888
Q ss_pred HHHHHhhh-hHHHHHHHHHH----HhccccCcchhhhhhhhhhhhhh
Q 021266 112 FNQAVGAT-TPFFTAVFAYL----MTLKREGWLTYVTLVPVVTGVII 153 (315)
Q Consensus 112 ~~~~l~~~-~pi~~~lls~~----~~~e~~~~~~~~~~~l~~~Gv~l 153 (315)
..+.+.-+ .-+...++..+ .-|++++++|.+++++.+.|+.+
T Consensus 92 ~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 92 LTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88877665 45556666664 34788899999999999999864
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.97 E-value=0.011 Score=43.36 Aligned_cols=53 Identities=15% Similarity=0.309 Sum_probs=44.0
Q ss_pred HHHhcCc-hhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 256 LVTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 256 ~~~~~~~-a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
..+|+.+ .+..++..-+..+.+.+.|+++|||++|..+++|..+++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4566665 4455677777888889999999999999999999999999998764
No 84
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.95 E-value=0.0094 Score=43.12 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=47.2
Q ss_pred HHHhcCc-hhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhh
Q 021266 256 LVTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 256 ~~~~~~~-a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
..+|+.+ .+..++..-+..+.+.+.|+++|||+++..+++|..+++.|+...+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 5577776 455678888899999999999999999999999999999999987653
No 85
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.85 E-value=0.0089 Score=44.66 Aligned_cols=55 Identities=20% Similarity=0.350 Sum_probs=45.1
Q ss_pred HHHhcCch-hhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhh
Q 021266 256 LVTKHTSA-LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 256 ~~~~~~~a-~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
..+++.+. ...++..-+..+.+.+.|+++|||++|..+++|..+++.|+...+..
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 55677663 33455566788889999999999999999999999999999988753
No 86
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.85 E-value=0.017 Score=51.46 Aligned_cols=140 Identities=12% Similarity=0.008 Sum_probs=91.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHH-HhhhchhHHHHHH
Q 021266 162 HLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITI-ALARQDVEFLWYL 240 (315)
Q Consensus 162 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 240 (315)
...|+++.+++++|++.+.+-.|+. +.-++|.. |. ..+.+..+...+.......+... .....+...+..-
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~------k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~ 76 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV------KKWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPV 76 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc------CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHH
Confidence 3579999999999999999999873 22456655 44 32332221111111000011111 1222456677788
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhh-HHHhhhhhhHhhhhhhheeecccc---c----ccccchhHHHHHHHHHhhh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALT-LQVLGNAKGAVAVVVSILIFRNPV---S----VTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~-~s~~~~~~~~~~~~~~~~~~ge~l---s----~~~~~G~~li~~g~~~~~~ 309 (315)
+++|++-...|..++..+++.|-+. ..+..-+.-+...+.+.+++||-- + ...++|.++++.|+.+..+
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888988888899888443 344445577778888888898632 2 3477899999999998876
No 87
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.60 E-value=0.028 Score=47.13 Aligned_cols=65 Identities=9% Similarity=0.051 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhh
Q 021266 89 ALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVII 153 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l 153 (315)
...+..+.+..+....++|.+....+....+.++++.+++.++++|+++..+|.|..+.+.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34556677888899999999999999999999999999999999999999999999999988754
No 88
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.53 E-value=0.025 Score=41.26 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=46.3
Q ss_pred HHHhcCc-hhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 256 LVTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 256 ~~~~~~~-a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
..+|+.+ ....++..-+..+.+.+.|+++|||++|+.+++|..+++.|+...+.
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 4566665 45667778889999999999999999999999999999999988754
No 89
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.35 E-value=0.068 Score=41.39 Aligned_cols=138 Identities=18% Similarity=0.211 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHH
Q 021266 163 LFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMF 242 (315)
Q Consensus 163 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (315)
.+..++.+.+..+...+.....++. +..+ +|.......+..++..+..+....++.+... ... ...++...
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~--~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~----~~pwW~~~ 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLA--RYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVA----SAPWWAWI 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHH--HHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hcc----CCchHHHH
Confidence 4567888999999999999999886 2233 6888888888888888877666654433221 111 11223344
Q ss_pred HHHHHHHHHHHHHHHHhcCchhhHHHhhhh-hhHhhhhhhheeec----ccccccccchhHHHHHHHHHhhh
Q 021266 243 NSSLAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSILIFR----NPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~~~~~~~~~~~~g----e~ls~~~~~G~~li~~g~~~~~~ 309 (315)
.|.++..+-........+.++++...+... +.+.+.++|.+=+. .+++...++|.++++.|+++...
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 556666665555566788887766665555 44445566655333 46899999999999999665543
No 90
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.13 E-value=0.00019 Score=60.08 Aligned_cols=133 Identities=14% Similarity=0.195 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHH
Q 021266 163 LFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMF 242 (315)
Q Consensus 163 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (315)
..|..+...+ ..+....+..++.. ..+|.+..-...+.-.+...|.......+-+. +..--.++++
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~-----e~~p~e~a~~r~l~~mlit~pcliy~~~~v~g--------p~g~R~~LiL 102 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVL-----ENDPMELASFRLLVRMLITYPCLIYYMQPVIG--------PEGKRKWLIL 102 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhh-----ccChhHhhhhhhhhehhhhheEEEEEeeeeec--------CCCcEEEEEe
Confidence 4677777777 77777777787765 22555555444333333333333322111100 0111223345
Q ss_pred HHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 243 NSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
=|+.++..-+.+++..++.+-..+.+.....|+++++++|.+++|+.|....+|..+.+.|+++..+
T Consensus 103 Rg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 103 RGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred ehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 5666666666677888999999999999999999999999999999999999999999999988754
No 91
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.98 E-value=0.019 Score=50.40 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=80.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHH
Q 021266 161 FHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYL 240 (315)
Q Consensus 161 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (315)
+...|..+++.++++.+....++|+-..+.++ ++.. ++.... ....++.+|..+
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~--~~~~--------------------~~~~~~----~~l~~~~W~~G~ 57 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR--GSLR--------------------AGSGGR----SYLRRPLWWIGL 57 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccc--------------------ccchhh----HHHhhHHHHHHH
Confidence 44689999999999999999999987632111 1000 000000 000112222222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
+ ....+.. ..+.+....+++..+.++.+.-+++.+++..+++|+++...+.|..+++.|..+.-
T Consensus 58 ~-~~~~g~~---~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 58 L-LMVLGEI---LNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred H-HHhcchH---HHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 2 2223333 33456788899999999999999999999999999999999999999999987653
No 92
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.62 E-value=0.024 Score=41.77 Aligned_cols=69 Identities=16% Similarity=0.107 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 85 FKISALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
++.++ -..+..+...++..+...+.+.+.-+. ++.=+|+.+.++++.+|..+++.+.|+++.+.|+.+.
T Consensus 43 ~y~ip-f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIP-FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34443 344556678888999999999988775 7889999999988888888999999999999998764
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.56 E-value=0.65 Score=36.05 Aligned_cols=129 Identities=11% Similarity=0.055 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhhHHHHHHHHHHHHHHHHhhh
Q 021266 23 TIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQHLKSQKQFFKISALGIIFCLSVVGGN 102 (315)
Q Consensus 23 ~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 102 (315)
+.-........-.|-.+-+. .+.|..-++.-+..+.+++..+.....+++.....++.+|+.+. .|++.+.......
T Consensus 11 i~aG~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~-GG~lGa~~vt~s~ 87 (150)
T COG3238 11 ILAGALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWI-GGLLGAIFVTSSI 87 (150)
T ss_pred HHHhhhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHH-ccchhhhhhhhhH
Confidence 33334444455566667666 44599999999999888888887753222222222334455544 5676666666666
Q ss_pred hhcccchhhHHHHHh-hhhHHHHHHHHHHHh----ccccCcchhhhhhhhhhhhhhh
Q 021266 103 VSLKYLPVSFNQAVG-ATTPFFTAVFAYLMT----LKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 103 ~al~~~~~~~~~~l~-~~~pi~~~lls~~~~----~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
.......+++.+.+. +-.-+..+++..+=. ++++++.++.++.+.++|+.+.
T Consensus 88 ~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 88 LLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 666666665555444 445666666654433 4678899999999999995544
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.53 E-value=0.062 Score=38.31 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=24.5
Q ss_pred HHHhcCchhhH-HHhhhhhhHhhhhhhheeecccccccccchhHHH
Q 021266 256 LVTKHTSALTL-QVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLT 300 (315)
Q Consensus 256 ~~~~~~~a~~~-s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li 300 (315)
.++|+.+...+ ++..-+..+...+.|.++|||++|..+++|..++
T Consensus 48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 56777765444 5666678889999999999999999999999875
No 95
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=94.30 E-value=0.43 Score=39.35 Aligned_cols=134 Identities=10% Similarity=-0.017 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccC-cc--ccCChhhhHHHHHHHHHHHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVA-PI--QHLKSQKQFFKISALGIIFCL 96 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~ 96 (315)
+|+.....++.+.+...|.-.+--.+. ...-.+...+.+..++...-...... +. ....+.+....+.+.|++-..
T Consensus 158 ~Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svg 236 (309)
T COG5070 158 LWMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVG 236 (309)
T ss_pred EEEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhh
Confidence 355555566666666666655432244 44455566666666665554432221 11 111234556677778888777
Q ss_pred HHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 97 SVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 97 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
-.++.-+.++-++.+++++..+++-...++.+.++++|+.++.++.++.++++..++.
T Consensus 237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999998889999999999999999999988877665544
No 96
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.25 E-value=0.11 Score=43.50 Aligned_cols=132 Identities=11% Similarity=0.126 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNS 244 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 244 (315)
+.++++.-++.|+.-.....|.- =+|.+.+.-+.+-+.++.+....+. .+ ......+..-+.+|
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G------G~p~qQ~lGtT~GALifaiiv~~~~-~p---------~~T~~~~iv~~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG------GKPYQQTLGTTLGALIFAIIVFLFV-SP---------ELTLTIFIVGFISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC------CChhHhhhhccHHHHHHHHHHheee-cC---------ccchhhHHHHHHhh
Confidence 56788888889988777665541 1566666555554444444433332 11 12234455566777
Q ss_pred HHHHHHHHHHHHHHhcCchhhHHHhhhh-hhHhhhhhhheeeccccccccc----chhHHHHHHHHHhhhhhc
Q 021266 245 SLAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSILIFRNPVSVTGM----AGYTLTVIGVILYNEAKR 312 (315)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~a~~~s~~~~~-~~~~~~~~~~~~~ge~ls~~~~----~G~~li~~g~~~~~~~~~ 312 (315)
..-.+.+..++...+..+.+.+..+.+- +-+-+.++|.+.|||--++.++ +..++++.|+++-+++++
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 7777778888888888887777666554 5566789999999998776643 456677888887776554
No 97
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.03 E-value=0.65 Score=40.47 Aligned_cols=137 Identities=9% Similarity=-0.013 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCc-----cccCChhhhHHHHHHHHH
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAP-----IQHLKSQKQFFKISALGI 92 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~ 92 (315)
...++...........+..|.-.+..+.. -+.......+.....+.......+..+ .+.......+......++
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 44556666666666667777777765554 555555666666666666655444322 011111223444554555
Q ss_pred HHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 93 IFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 93 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
+...-.++...+.+..|+.+.++...-+-..+.+....+.+++.++....|+.++++|.+...
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 556677899999999999999998877777777777777788889999999998888887664
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.96 E-value=1.1 Score=39.99 Aligned_cols=136 Identities=14% Similarity=0.005 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--CCChhHHHHHHHHHHHHHHHH----HHHHHhccCccccCChhhhHHHHHHHHHH
Q 021266 20 GLITIWYSSNIGVILLNKYLLSSY--GFKYPIFLTLCHMMACSLLSY----VAVAWLKVAPIQHLKSQKQFFKISALGII 93 (315)
Q Consensus 20 ~~~~~~~~~~~~~~~~~k~~~~~~--~~~~p~~~~~~r~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 93 (315)
+....-...-..+.++-|+-..++ +.+-|.+..+. .++..+++. ++-+ .+ .++-..++..+....+..++.
T Consensus 250 llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfv-GLfnllllwP~l~iL~~-~~-~e~F~lP~~~q~~~vv~~~li 326 (416)
T KOG2765|consen 250 LLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFV-GLFNLLLLWPPLIILDF-FG-EERFELPSSTQFSLVVFNNLI 326 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHH-HHHHHHHHhHHHHHHHH-hc-cCcccCCCCceeEeeeHhhHH
Confidence 333333333344455667666665 35544433322 233333333 2222 22 222223344445555556665
Q ss_pred H-HHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcccc
Q 021266 94 F-CLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGE 158 (315)
Q Consensus 94 ~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 158 (315)
. .++-+++..|.-.+++-.+++-.+.+....++...++-++++++..++|.+.++.|-+.+...+
T Consensus 327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 5 5688999999999999999999999988999999999999999999999999999999886543
No 99
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.81 E-value=0.096 Score=43.40 Aligned_cols=73 Identities=18% Similarity=0.151 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 82 KQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
..++.....+++..+++.+.+.-..+-++-+-+++..+.-+|+.+.|.++++..++.+||++..+.+.|...-
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 4456666778888999999999999988888888999999999999999999999999999999998887643
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.72 E-value=0.51 Score=34.77 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=40.5
Q ss_pred HHHhcCchhhHH-HhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHH
Q 021266 256 LVTKHTSALTLQ-VLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVIL 306 (315)
Q Consensus 256 ~~~~~~~a~~~s-~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~ 306 (315)
..+++.+-+.+. +.|.+.-+++.+.++++.+|..+...++|+.+++.|+.+
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 556777644444 447888899999998888888888999999999999864
No 101
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.99 E-value=3.8 Score=36.35 Aligned_cols=140 Identities=12% Similarity=0.069 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHH-hHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHH
Q 021266 163 LFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYM-APVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLM 241 (315)
Q Consensus 163 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (315)
..|+++..+++++.+.+.+=.||. |+ =++|..... .+++-++.-+......-++..+.... .+...+....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv---k~---WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~--~~~~~l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV---KG---WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA--TPASTLFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc---CC---ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh--CChhHHHHHH
Confidence 579999999999999999998876 22 344444333 33333333222223333333322221 2223344444
Q ss_pred HHHHHHHHHHHHHHHHHhcCch-hhHHHhhhhhhHhhhhhhhee-------ecccccccccchhHHHHHHHHHhhhh
Q 021266 242 FNSSLAYFVNLTNFLVTKHTSA-LTLQVLGNAKGAVAVVVSILI-------FRNPVSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~a-~~~s~~~~~~~~~~~~~~~~~-------~ge~ls~~~~~G~~li~~g~~~~~~~ 310 (315)
+.|+.-....+..-..+|+.+- ...++..-+..++..+.--++ ++++-....++|.++.+.|+....+.
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 4444433333333344566552 222222222222222222222 22333456889999999999988754
No 102
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.63 E-value=0.23 Score=42.30 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHH
Q 021266 165 GFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNS 244 (315)
Q Consensus 165 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 244 (315)
|.+.+++|+++++...+=.||. +.-|+.-.++++.....+.........+.+ .+..+.+++|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-----~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p-------------~f~p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-----DTGDGFFFQWVMCSGIFLVGLVVNLILGFP-------------PFYPWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-----cCCCcHHHHHHHHHHHHHHHHHHHHhcCCC-------------cceeHHHhhh
Confidence 5677889999999999988875 334777777777665544444444333222 2344556666
Q ss_pred HHHHHHHHHHHHHHhcCc-hhhHHHhhhhhhHhhhhhhhe-eeccc-----ccccccchhHHHHHHHHHhhhh
Q 021266 245 SLAYFVNLTNFLVTKHTS-ALTLQVLGNAKGAVAVVVSIL-IFRNP-----VSVTGMAGYTLTVIGVILYNEA 310 (315)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-a~~~s~~~~~~~~~~~~~~~~-~~ge~-----ls~~~~~G~~li~~g~~~~~~~ 310 (315)
.+-...|.+..-.++.+| +....+.+..+-+.....|-+ +||++ -.....+|.++++.|...|..-
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 666666777666777776 344455555566666665543 56653 2456899999999999988753
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=86.56 E-value=0.22 Score=40.15 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhh
Q 021266 249 FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNE 309 (315)
Q Consensus 249 ~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~ 309 (315)
..|+.+..++++++|+.++....-+..+..+++|+++||++...+++..++.+.|++...+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 4466666889999999999999999999999999999999999999999999999877654
No 104
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=85.01 E-value=6.6 Score=33.67 Aligned_cols=124 Identities=8% Similarity=-0.036 Sum_probs=71.3
Q ss_pred HHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCcccc----CChhhhHHHHHHHHHHHHHHHHhhhhhcccchh
Q 021266 35 LNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPIQH----LKSQKQFFKISALGIIFCLSVVGGNVSLKYLPV 110 (315)
Q Consensus 35 ~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 110 (315)
+++..++.++-+ ...+.+.-+.++.+.++......+..-+.. ..+.+.....+..++...+++.+--.=.+--.+
T Consensus 208 vQEk~m~~~~~s-s~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA 286 (367)
T KOG1582|consen 208 VQEKAMKMNPAS-SSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGA 286 (367)
T ss_pred HHHHHHhhCCCC-cceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhch
Confidence 445555543323 345555555556555555444343321111 012223334444454444433322222233455
Q ss_pred hHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccccC
Q 021266 111 SFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGGEP 159 (315)
Q Consensus 111 ~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 159 (315)
..+..+....-..+.++|++++.++++.+...+..+.+.|+.+=..++.
T Consensus 287 ~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 287 LIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 5666666667778999999999999999999999999999987665553
No 105
>PRK02237 hypothetical protein; Provisional
Probab=79.38 E-value=18 Score=26.30 Aligned_cols=47 Identities=11% Similarity=0.033 Sum_probs=39.1
Q ss_pred hHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 265 TLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 265 ~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
..+..+-+-.+.+.+.++.+-|++++...++|..+++.|..+....+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34556666778888999999999999999999999999998775544
No 106
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=76.81 E-value=35 Score=29.58 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhccCcc------ccCChhhhHHHH----
Q 021266 18 TLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAVAWLKVAPI------QHLKSQKQFFKI---- 87 (315)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~---- 87 (315)
..+.++.=+..++.++.-.|++ ++.+.+ |...+.++-+.+.+.+..........+. ++....+++...
T Consensus 178 dllIiiaqiivaiQ~v~Eek~l-~~~nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~ 255 (372)
T KOG3912|consen 178 DLLIIIAQIIVAIQMVCEEKQL-KKSNVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAAL 255 (372)
T ss_pred hHHHHHHHHHHHHHHHHHHhhh-hhccCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHh
Confidence 3444555566666666555555 445677 9999999998886665544332211111 111112222221
Q ss_pred ------HHHHHHHHHHHHhhhhh----cccchhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 88 ------SALGIIFCLSVVGGNVS----LKYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 88 ------l~~~~~~~~~~~~~~~a----l~~~~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
......+..+..+.|++ -++.++++=.++-+....++=+++.....|++...|+.|..+...|..+..
T Consensus 256 ~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 256 QESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred cCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111223333333332 356788888999999999999999999999999999999999999988663
No 107
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.73 E-value=0.73 Score=40.20 Aligned_cols=118 Identities=16% Similarity=0.245 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHH
Q 021266 161 FHLFGFIMCISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYL 240 (315)
Q Consensus 161 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (315)
.+..|..+++.+++..+...++.|+..++... .. .-..++. .+ .. ....|+.-
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~----------------~ra~~gg-~~-----yl-~~~~Ww~G 70 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG----------------LRAGEGG-YG-----YL-KEPLWWAG 70 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc----------------ccccCCC-cc-----hh-hhHHHHHH
Confidence 45678889999998888888888887621100 00 0000111 00 00 11334444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhh
Q 021266 241 MFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~ 308 (315)
++...++-..|++. ....+++-.+.++.+.-+.+.+++..+++|+++....+|+.+.+.|....-
T Consensus 71 ~ltm~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 71 MLTMIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 55555566666544 466778888888899999999999999999999999999999999986553
No 108
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.13 E-value=14 Score=26.78 Aligned_cols=46 Identities=13% Similarity=0.064 Sum_probs=39.1
Q ss_pred HHHhhhhhhHhhhhhhheeecccccccccchhHHHHHHHHHhhhhh
Q 021266 266 LQVLGNAKGAVAVVVSILIFRNPVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 266 ~s~~~~~~~~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
.+..+-+-.+.+.+.++.+-|++++...++|..+++.|..+....+
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4556666788899999999999999999999999999998776544
No 109
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.32 E-value=38 Score=24.11 Aligned_cols=31 Identities=10% Similarity=0.146 Sum_probs=26.7
Q ss_pred HHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 125 AVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 125 ~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
..+|.+.+||++++..+.+..+...|+.++.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4578899999999999999999988887654
No 110
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.77 E-value=25 Score=30.41 Aligned_cols=108 Identities=14% Similarity=0.036 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCcc----ccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHhhhhHHH
Q 021266 48 PIFLTLCHMMACSLLSYVAVAWLKVAPI----QHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVGATTPFF 123 (315)
Q Consensus 48 p~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 123 (315)
-+.+++...+.+.++.++.....+..+. ++.+....|..+.+.|++...-++.+..=++-+++-+.-+-....-..
T Consensus 215 iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~a 294 (347)
T KOG1442|consen 215 IWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAA 294 (347)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHH
Confidence 5788999999999999888775554332 122233444445555555444444555556667766666655556666
Q ss_pred HHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 124 TAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 124 ~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
=.+++..+++|..+...|-+.++...|.....
T Consensus 295 QTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 295 QTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 67888999999999999999988888776543
No 111
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=68.09 E-value=43 Score=24.19 Aligned_cols=42 Identities=12% Similarity=0.156 Sum_probs=33.5
Q ss_pred HhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 116 VGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 116 l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
-.....+...+..+.+-|.++++..|.+..++++|+.++..+
T Consensus 64 YGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 64 YGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 334455666677788889999999999999999998877654
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=63.38 E-value=55 Score=23.78 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=36.1
Q ss_pred HHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhccc
Q 021266 113 NQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASGG 157 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 157 (315)
+..-.....+...+..+.+-|+++++..+++..+++.|+.++...
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 334444566677788899999999999999999999999977543
No 113
>PRK02237 hypothetical protein; Provisional
Probab=61.95 E-value=60 Score=23.69 Aligned_cols=44 Identities=9% Similarity=0.093 Sum_probs=35.3
Q ss_pred HHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhcc
Q 021266 113 NQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIASG 156 (315)
Q Consensus 113 ~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 156 (315)
+..-.....+...+..+.+-|+|+++..+++..++++|+.++..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 33444455666678889999999999999999999999987754
No 114
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=58.66 E-value=68 Score=23.29 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=34.3
Q ss_pred hhcccchhhHHHHHhh-hhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 103 VSLKYLPVSFNQAVGA-TTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 103 ~al~~~~~~~~~~l~~-~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
+|.+.-+.+.--++.= .+-..-..++.+++||++++.+..|..+..+++.++
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 4555544444333332 223334557888999999999999999998776654
No 115
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=57.70 E-value=2.6 Score=35.67 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=72.3
Q ss_pred ChHHHHHHHhHHHHHHHHHHHHHhcchhHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhHHHhhhhhh
Q 021266 195 NSMNLLMYMAPVAAIFLLPAALIMEKDVVGITIALARQDVEFLWYLMFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKG 274 (315)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~ 274 (315)
.|...++.....-++..-|...+.. ..+. ..|.--++.++.-.=.|+....+-++++-+......+-..
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~~----------~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwai 115 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRR-KYIK----------AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAI 115 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhh-HHHH----------HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhh
Confidence 4666666666666667777666543 1111 1222334444444445555556778888889999999999
Q ss_pred HhhhhhhheeecccccccccchhHHHHHHHHHh
Q 021266 275 AVAVVVSILIFRNPVSVTGMAGYTLTVIGVILY 307 (315)
Q Consensus 275 ~~~~~~~~~~~ge~ls~~~~~G~~li~~g~~~~ 307 (315)
+...+++|++++.+-...++.|..+++.|+...
T Consensus 116 p~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 116 PCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred HHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 999999999999999999999999999888644
No 116
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=53.88 E-value=22 Score=25.73 Aligned_cols=61 Identities=21% Similarity=0.218 Sum_probs=43.7
Q ss_pred HHHHHHhhhhhcccchhhHHHHH-hhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhh
Q 021266 94 FCLSVVGGNVSLKYLPVSFNQAV-GATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIA 154 (315)
Q Consensus 94 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~ 154 (315)
.-.+..+++.-+++.+.+.+.-. .+++-.|+.+.+..+..|...++..++..+.++|..+.
T Consensus 62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 34445667777777777766544 45678889999987765556677888988888887654
No 117
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=53.78 E-value=1.7e+02 Score=26.30 Aligned_cols=258 Identities=12% Similarity=0.083 Sum_probs=133.2
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhccCcc----ccCChhhhHHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHh-hhhHH
Q 021266 49 IFLTLC-HMMACSLLSYVAVAWLKVAPI----QHLKSQKQFFKISALGIIFCLSVVGGNVSLKYLPVSFNQAVG-ATTPF 122 (315)
Q Consensus 49 ~~~~~~-r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi 122 (315)
++..+. +.++++++...+..... .|. ....+.+........|++-..+...+=.+.+|+..+..+-+. .+.-.
T Consensus 34 WEs~Wlv~gi~swli~P~~~a~l~-ip~~~~i~~~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~ 112 (344)
T PF06379_consen 34 WESYWLVQGIFSWLIVPWLWALLA-IPDFFSIYSATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAV 112 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHhCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHH
Confidence 444333 44566666655543222 221 112344556666677888888888888899998777655333 23333
Q ss_pred HHHHHHHHHhc-------cccCcchhhhhhhhhhhhhhhccc----c-------Ccc-cHHHHHHHHHHHHHHHHHHHHH
Q 021266 123 FTAVFAYLMTL-------KREGWLTYVTLVPVVTGVIIASGG----E-------PSF-HLFGFIMCISATAARALKTVLQ 183 (315)
Q Consensus 123 ~~~lls~~~~~-------e~~~~~~~~~~~l~~~Gv~l~~~~----~-------~~~-~~~G~~~~l~a~~~~a~~~v~~ 183 (315)
+-.++-.++.+ ++-....++++.+.++|+++.... | .++ -..|.++++.+.+.+|+.+.-.
T Consensus 113 ~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 113 FGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred HhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 44444333333 222345788999999999988531 1 112 2479999999999999998866
Q ss_pred HHHhcc----CCCCCChHHHHH--H-H-hHHHHHHHHHHHHHh--cchhHHHHHHh---hhchhHHHHHHHHHHHHHHHH
Q 021266 184 GILLSS----EGEKLNSMNLLM--Y-M-APVAAIFLLPAALIM--EKDVVGITIAL---ARQDVEFLWYLMFNSSLAYFV 250 (315)
Q Consensus 184 k~~~~~----~~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~ 250 (315)
+.-.+- .....+|..... | . ..-+.+..+...++. .........+. ...-........+.|..-+..
T Consensus 193 ~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~q 272 (344)
T PF06379_consen 193 DAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQ 272 (344)
T ss_pred HcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 542100 001112221111 1 1 111222222222221 00111000000 000112233344445444444
Q ss_pred HHHHHHHHhcCc----hhhHHHhhhhhhHhhhhhhheeeccc------ccccccchhHHHHHHHHHhh
Q 021266 251 NLTNFLVTKHTS----ALTLQVLGNAKGAVAVVVSILIFRNP------VSVTGMAGYTLTVIGVILYN 308 (315)
Q Consensus 251 ~~~~~~~~~~~~----a~~~s~~~~~~~~~~~~~~~~~~ge~------ls~~~~~G~~li~~g~~~~~ 308 (315)
.+.+-++-.+.+ ...-.+.+.+..+++-+.|.+ ++|- --...++|.++++.+..+..
T Consensus 273 fffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 273 FFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 433334444444 556677777888888888877 4662 12335778888887776553
No 118
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=52.19 E-value=6.6 Score=28.34 Aligned_cols=29 Identities=10% Similarity=0.165 Sum_probs=25.0
Q ss_pred hhhhheeecccccccccchhHHHHHHHHH
Q 021266 278 VVVSILIFRNPVSVTGMAGYTLTVIGVIL 306 (315)
Q Consensus 278 ~~~~~~~~ge~ls~~~~~G~~li~~g~~~ 306 (315)
..++.++++|+++..+..|.++++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 46778899999999999999999888754
No 119
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=40.80 E-value=2.1e+02 Score=23.61 Aligned_cols=39 Identities=18% Similarity=0.360 Sum_probs=26.6
Q ss_pred hhhhHHHHHHHHHHHhcccc-------------Ccchhhhhhhhhhhhhhhc
Q 021266 117 GATTPFFTAVFAYLMTLKRE-------------GWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 117 ~~~~pi~~~lls~~~~~e~~-------------~~~~~~~~~l~~~Gv~l~~ 155 (315)
....|..+.++.+...+||. +.++..++++.+.|+.++.
T Consensus 159 i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~ 210 (214)
T PF11139_consen 159 IASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLG 210 (214)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 35678888888888888775 2234556677777766553
No 120
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.53 E-value=14 Score=26.23 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=26.4
Q ss_pred hhhhheeecccccccccchhHHHHHHHHHh
Q 021266 278 VVVSILIFRNPVSVTGMAGYTLTVIGVILY 307 (315)
Q Consensus 278 ~~~~~~~~ge~ls~~~~~G~~li~~g~~~~ 307 (315)
..++.+.++||+.+.++.|..++..|++..
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999999888765
No 121
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=39.33 E-value=9.9 Score=32.69 Aligned_cols=94 Identities=7% Similarity=0.007 Sum_probs=0.0
Q ss_pred cchhhHHHHHhhhhHHHHHH-HHHHHhcccc-Ccchhhhhhhhhhhhhhhcccc--CcccHHHHHHHHHHHHHHHHHHHH
Q 021266 107 YLPVSFNQAVGATTPFFTAV-FAYLMTLKRE-GWLTYVTLVPVVTGVIIASGGE--PSFHLFGFIMCISATAARALKTVL 182 (315)
Q Consensus 107 ~~~~~~~~~l~~~~pi~~~l-ls~~~~~e~~-~~~~~~~~~l~~~Gv~l~~~~~--~~~~~~G~~~~l~a~~~~a~~~v~ 182 (315)
-.+-+..+++.++..+.+.+ +-.+++|+|+ -..-.+|++++++-.++...-. .+.-++|+++.+...+.--.-..+
T Consensus 46 d~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Y 125 (381)
T PF05297_consen 46 DLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFY 125 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556666666554444 3344556664 5666777777766555444322 233345654443332221111111
Q ss_pred HHHHhccCCCCCChHHHHHHH
Q 021266 183 QGILLSSEGEKLNSMNLLMYM 203 (315)
Q Consensus 183 ~k~~~~~~~~~~~~~~~~~~~ 203 (315)
. +++ ++...+-|+++++.
T Consensus 126 m-~lL--r~~GAs~WtiLaFc 143 (381)
T PF05297_consen 126 M-WLL--RELGASFWTILAFC 143 (381)
T ss_dssp ---------------------
T ss_pred H-HHH--HHhhhHHHHHHHHH
Confidence 1 122 33455667665554
No 122
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=37.17 E-value=2.9e+02 Score=24.20 Aligned_cols=47 Identities=11% Similarity=0.045 Sum_probs=37.2
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHhccccCcchhhhhhhhhhhhhhhc
Q 021266 109 PVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYVTLVPVVTGVIIAS 155 (315)
Q Consensus 109 ~~~~~~~l~~~~pi~~~lls~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 155 (315)
++-++++.....=.+..++|.+.++..+++..|+|..+.+.|..+..
T Consensus 267 ~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 267 SSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred cceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 33444555666777888899999999999999999999999988764
No 123
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=35.86 E-value=1.2e+02 Score=22.73 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=39.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHH
Q 021266 13 YGSFFTLGLITIWYSSNIGVILLNKYLLSSYGFKYPIFLTLCHMMACSLLSYVAV 67 (315)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~r~~~~~~~l~~~~ 67 (315)
++......+++....+++...++-|.++.... +||++++-.....-..+.+++.
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~-NY~fFL~QlTt~gyvpIffaV~ 106 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMK-NYPFFLNQLTTFGYVPIFFAVV 106 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHhcccceehHHHHHH
Confidence 44566778888888899998999999988743 4688887776655555555443
No 124
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=32.51 E-value=57 Score=24.83 Aligned_cols=28 Identities=25% Similarity=0.160 Sum_probs=24.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021266 160 SFHLFGFIMCISATAARALKTVLQGILL 187 (315)
Q Consensus 160 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~ 187 (315)
+++.+|.++.-.-.+.|++|.++.|.+-
T Consensus 102 sn~~LgwIL~gVf~lIWslY~~~~~~l~ 129 (138)
T PF07123_consen 102 SNNLLGWILLGVFGLIWSLYFVYTSTLD 129 (138)
T ss_pred cCchhHHHHHHHHHHHHHHHHhhccccC
Confidence 4567899999999999999999999873
No 125
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=31.58 E-value=1.4e+02 Score=26.39 Aligned_cols=131 Identities=8% Similarity=0.006 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhHHHHHHHHHHHHHh-c--c---hh-HHHHHHhhhchhHHHHHHHH
Q 021266 170 ISATAARALKTVLQGILLSSEGEKLNSMNLLMYMAPVAAIFLLPAALIM-E--K---DV-VGITIALARQDVEFLWYLMF 242 (315)
Q Consensus 170 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---~~-~~~~~~~~~~~~~~~~~l~~ 242 (315)
+++.+||+.+-...|-.-+ +.+ ..+..+|-..++.++...+..+. + + +. ..-..+....+.......+.
T Consensus 2 ~itmlcwGSW~nt~kL~~r--~gR--~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~a 77 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAER--RGR--LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMA 77 (336)
T ss_pred eeehhhhcChHHHHHHHHh--cCC--ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHH
Confidence 4567888888888877642 111 11235555555554443332222 1 1 11 11112223334444555666
Q ss_pred HHHHHHHHHHHHHHHHhcCchhhHHHhhhhhhHhhhhhhhee---eccccc--ccccchhHHHHHHHHHh
Q 021266 243 NSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILI---FRNPVS--VTGMAGYTLTVIGVILY 307 (315)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~~~---~ge~ls--~~~~~G~~li~~g~~~~ 307 (315)
.|++--..|++..+.+...|-+. ...+..-++.++|..+ .+++.. ...+.|..+++.++++-
T Consensus 78 GGvvfnlgNillq~aia~aGmSV---afpvg~glalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 78 GGVVFNLGNILLQAAIAFAGMSV---AFPVGIGLALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILG 144 (336)
T ss_pred hhHhhhhHHHHHHHHHHHhccee---eeeeecceEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHH
Confidence 77777777887777777666432 2222233333344332 344554 35566777777766543
No 126
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.12 E-value=6e+02 Score=23.78 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHhccccCcchhhhhhhh--hhhhhhhccccCcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021266 120 TPFFTAVFAYLMTLKREGWLTYVTLVPV--VTGVIIASGGEPSFHLFGFIMCISATAARALKTVLQGILLS 188 (315)
Q Consensus 120 ~pi~~~lls~~~~~e~~~~~~~~~~~l~--~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~ 188 (315)
.++.+..+-=.+-|.|++..|++=++++ +.=.++++.+|- -.++....+.|..|-.+-..+.+...|
T Consensus 307 LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh--i~F~~AYliAa~a~i~Li~~Y~~~vl~ 375 (430)
T PF06123_consen 307 LTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH--IGFNLAYLIAALACIGLISLYLSSVLK 375 (430)
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333334444555777777776544443 333344444432 224567777777777787888888873
No 127
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=23.82 E-value=1e+02 Score=22.46 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=34.8
Q ss_pred HHHhcCchhhHH-HhhhhhhHhhhhhhheeeccccc-ccccchhHHHHHHHHHh
Q 021266 256 LVTKHTSALTLQ-VLGNAKGAVAVVVSILIFRNPVS-VTGMAGYTLTVIGVILY 307 (315)
Q Consensus 256 ~~~~~~~a~~~s-~~~~~~~~~~~~~~~~~~ge~ls-~~~~~G~~li~~g~~~~ 307 (315)
..+++++-+.+. +.+.+.-.++...|... ||+.. ...++|..+++.|+++.
T Consensus 71 ~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 71 LTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence 556666644433 44555666677777774 66654 56899999999998764
No 128
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=22.97 E-value=5e+02 Score=22.46 Aligned_cols=24 Identities=25% Similarity=0.257 Sum_probs=16.3
Q ss_pred cccccccchhHHHHHHHHHhhhhh
Q 021266 288 PVSVTGMAGYTLTVIGVILYNEAK 311 (315)
Q Consensus 288 ~ls~~~~~G~~li~~g~~~~~~~~ 311 (315)
+.+...++|..+.+.-.+.|..++
T Consensus 236 pv~lGNivGG~v~vgl~Y~~~~~~ 259 (265)
T COG2116 236 PVTLGNIVGGAVFVGLMYWYLYRK 259 (265)
T ss_pred HHHHhchhcchhhhhHHHHHhccc
Confidence 445677888888777666665444
No 129
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=22.70 E-value=6e+02 Score=23.32 Aligned_cols=25 Identities=12% Similarity=-0.138 Sum_probs=12.5
Q ss_pred cHHHHHHHHHHH-HHHHHHHHHHHHH
Q 021266 162 HLFGFIMCISAT-AARALKTVLQGIL 186 (315)
Q Consensus 162 ~~~G~~~~l~a~-~~~a~~~v~~k~~ 186 (315)
++...++.++++ +++-.+..+.||.
T Consensus 274 p~~A~~iG~iag~i~~~~~~~l~~~~ 299 (399)
T PF00909_consen 274 PWGALLIGAIAGLISYFGVSWLLKRL 299 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhhhhhhheeccccee
Confidence 445566666663 3343443355554
No 130
>PF15055 DUF4536: Domain of unknown function (DUF4536)
Probab=22.63 E-value=64 Score=19.65 Aligned_cols=20 Identities=25% Similarity=0.498 Sum_probs=15.3
Q ss_pred cchhHHHHHHHHHhhhhhcc
Q 021266 294 MAGYTLTVIGVILYNEAKRQ 313 (315)
Q Consensus 294 ~~G~~li~~g~~~~~~~~~~ 313 (315)
+-|..++-.|.++|...|++
T Consensus 8 vSG~GLig~G~Yv~~~ark~ 27 (47)
T PF15055_consen 8 VSGGGLIGAGAYVYAQARKR 27 (47)
T ss_pred ecccchHHHHHHHHHHHhhc
Confidence 44777888899999877665
No 131
>COG3247 HdeD Uncharacterized conserved protein [Function unknown]
Probab=21.57 E-value=4.5e+02 Score=21.37 Aligned_cols=39 Identities=21% Similarity=0.396 Sum_probs=26.4
Q ss_pred hhhhhHhhhhhhheeecccccc----cccchhHHHHHHHHHhh
Q 021266 270 GNAKGAVAVVVSILIFRNPVSV----TGMAGYTLTVIGVILYN 308 (315)
Q Consensus 270 ~~~~~~~~~~~~~~~~ge~ls~----~~~~G~~li~~g~~~~~ 308 (315)
..+.-+++++.|++...+|... .-++|.-+++.|.....
T Consensus 134 ~ii~Gvl~ii~g~ill~~P~~~~~~l~~llGI~li~~G~~~i~ 176 (185)
T COG3247 134 MIISGVLGIIAGLILLFNPVASAWILGLLLGIELIFQGIALIA 176 (185)
T ss_pred HHHHHHHHHHHHHHHHHccHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777888877777543 46677777888876654
No 132
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=21.39 E-value=6.5e+02 Score=23.23 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=11.4
Q ss_pred chhHHHHHHHHHhhhh
Q 021266 295 AGYTLTVIGVILYNEA 310 (315)
Q Consensus 295 ~G~~li~~g~~~~~~~ 310 (315)
.|..+++.|...|...
T Consensus 419 ~~~~~~~~g~~~y~~~ 434 (445)
T PRK11357 419 CAVIVIATGLPAYAFW 434 (445)
T ss_pred HHHHHHHHhhhHHhhe
Confidence 5777778888777543
No 133
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=21.29 E-value=58 Score=17.74 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=8.2
Q ss_pred cccccchhHHHHHHHH
Q 021266 290 SVTGMAGYTLTVIGVI 305 (315)
Q Consensus 290 s~~~~~G~~li~~g~~ 305 (315)
+...++|..++..+.+
T Consensus 11 ~~~~~~G~~l~~~~~~ 26 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGL 26 (34)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455667744444333
Done!