BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021268
(315 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 57/301 (18%)
Query: 18 SFAHSGLKSSTVDLGEGTVMHCWVPKTHKQNKPNLCLIHGIG----ANAMWQWADFISPL 73
S +G+ ++ D+GEG +P + LIHG G A A W+ P
Sbjct: 9 SILAAGVLTNYHDVGEG--------------QP-VILIHGSGPGVSAYANWR---LTIPA 50
Query: 74 ISKF-NVYVPDLLFFGDSYTSRPDR---SESFQARCVMGLLDAHGVAKTHVVGMSYGGFV 129
+SKF V PD++ FG +T RP+ S+ ++G++DA + K H+VG S+GG +
Sbjct: 51 LSKFYRVIAPDMVGFG--FTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNSFGGGL 108
Query: 130 GYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKL 189
+ A ++ E+V R+VL+ G D+ +GL V + E MR LL +
Sbjct: 109 AIATALRYSERVDRMVLM--GAVGTRFDVTEGLNAVWGYTPSI--------ENMRNLLDI 158
Query: 190 TFY------------KPPKSIPSCFFSDFIGVMCTTYLEERNELIEALFKGRKLSDLPKI 237
Y + SI F F + + E R I+AL + D+ +
Sbjct: 159 FAYDRSLVTDELARLRYEASIQPGFQESF----SSMFPEPRQRWIDALASSDE--DIKTL 212
Query: 238 TQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLT 297
TLII G DQV P+ + RL L D A+L + + GH +E+ + + F
Sbjct: 213 PNETLIIHGREDQVVPLSSSLRLG-ELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFN 271
Query: 298 D 298
+
Sbjct: 272 E 272
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 133/301 (44%), Gaps = 57/301 (18%)
Query: 18 SFAHSGLKSSTVDLGEGTVMHCWVPKTHKQNKPNLCLIHGIG----ANAMWQWADFISPL 73
S +G+ ++ D+GEG +P + LIHG G A A W+ P
Sbjct: 9 SILAAGVLTNYHDVGEG--------------QP-VILIHGSGPGVSAYANWR---LTIPA 50
Query: 74 ISKF-NVYVPDLLFFGDSYTSRPDR---SESFQARCVMGLLDAHGVAKTHVVGMSYGGFV 129
+SKF V PD++ FG +T RP+ S+ ++G++DA + K H+VG ++GG +
Sbjct: 51 LSKFYRVIAPDMVGFG--FTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGL 108
Query: 130 GYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKL 189
+ A ++ E+V R+VL+ G D+ +GL V + E MR LL +
Sbjct: 109 AIATALRYSERVDRMVLM--GAAGTRFDVTEGLNAVWG--------YTPSIENMRNLLDI 158
Query: 190 TFY------------KPPKSIPSCFFSDFIGVMCTTYLEERNELIEALFKGRKLSDLPKI 237
Y + SI F F + + E R I+AL + D+ +
Sbjct: 159 FAYDRSLVTDELARLRYEASIQPGFQESF----SSMFPEPRQRWIDALASSDE--DIKTL 212
Query: 238 TQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLT 297
TLII G DQV P+ + RL L D A+L + + GH +E+ + + F
Sbjct: 213 PNETLIIHGREDQVVPLSSSLRLG-ELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFN 271
Query: 298 D 298
+
Sbjct: 272 E 272
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 58/269 (21%)
Query: 48 NKPNLCLIHGIG--ANAMWQWADFISPLISKFNVYVPDLLFFGDS-----YTSRPDRSES 100
P + L+HG G A+A W I L F V PDL+ FG S Y
Sbjct: 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVG 87
Query: 101 FQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLI-CAGVCMEEKDMD 159
+ ++GL++ G+ K+H+VG S GG V + + E+ +V L+ G M
Sbjct: 88 MRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN----- 142
Query: 160 DGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIP-----SCFFSD---FIGV-- 209
RP ++ +L L FY P+ P F D F G+
Sbjct: 143 ------------------ARPPELARL--LAFYADPRLTPYRELIHSFVYDPENFPGMEE 182
Query: 210 MCTTYLEERNE-----LIEALFKGRKL---------SDLPKITQPTLIIWGEHDQVFPVE 255
+ + E N+ + E +F+ K + L ++ L+ G D++ P++
Sbjct: 183 IVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLD 242
Query: 256 LAHRLKRHLGDNAELKILKKVGHAVNMEK 284
+ L +HL +AEL +L + GH +E+
Sbjct: 243 TSLYLTKHL-KHAELVVLDRCGHWAQLER 270
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 63/284 (22%)
Query: 47 QNKPNLCLIHGIGANAMWQWADF---ISPLI-SKFNVYVPDLLFFG--DSYTSRPDRSES 100
Q + L+HG G A WA+F I PL+ + + V + D +G DS + RS+
Sbjct: 34 QGDETVVLLHGSGPGAT-GWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSD- 91
Query: 101 FQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDD 160
AR + ++D +AK H++G S GG + ++ E+VG++VL+ G
Sbjct: 92 LNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTG-------- 143
Query: 161 GLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERNE 220
+ P E +++L +L Y+ P + + +M ++ + ++
Sbjct: 144 ----------GMSLFTPMPTEGIKRLNQL--YRQPT-------IENLKLMMDIFVFDTSD 184
Query: 221 LIEALFKGR-----------------------KLSD----LPKITQPTLIIWGEHDQVFP 253
L +ALF+ R + D L +I TLI+WG +D+ P
Sbjct: 185 LTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP 244
Query: 254 VELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLT 297
++ RL + +EL I + GH E + + FL
Sbjct: 245 MDAGLRLLSGIA-GSELHIFRDCGHWAQWEHADAFNQLVLNFLA 287
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 22/262 (8%)
Query: 48 NKPNLCLIHGIGANAMWQWADF---ISPLISKFNVYVPDLLFFGDSYTSRPDRSE--SFQ 102
N + L+HG G A W +F I+ L F+V D +G S R + + +
Sbjct: 55 NDQTVVLLHGGGPGAA-SWTNFSRNIAVLARHFHVLAVDQPGYGHS-DKRAEHGQFNRYA 112
Query: 103 ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAG---VCMEEKDMD 159
A + GL D G+ + +VG S GG A + + GR+VL+ G + + D
Sbjct: 113 AMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPT 172
Query: 160 DGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERN 219
+G+ ++ + A P R E + L++ Y P F L
Sbjct: 173 EGVKRLSKFSVA-----PTR-ENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATR 226
Query: 220 ELIEALF-----KGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILK 274
+ ++ G ++ ++ QP L+IWG D+V P++ A + + A+L +
Sbjct: 227 AMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLHVFG 285
Query: 275 KVGHAVNMEKPKEMYKSMKAFL 296
+ GH V +EK E K FL
Sbjct: 286 QCGHWVQVEKFDEFNKLTIEFL 307
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 22/262 (8%)
Query: 48 NKPNLCLIHGIGANAMWQWADF---ISPLISKFNVYVPDLLFFGDSYTSRPDRSE--SFQ 102
N + L+HG G A W +F I+ L F+V D +G S R + + +
Sbjct: 35 NDQTVVLLHGGGPGAA-SWTNFSRNIAVLARHFHVLAVDQPGYGHS-DKRAEHGQFNRYA 92
Query: 103 ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAG---VCMEEKDMD 159
A + GL D G+ + +VG + GG A + + GR+VL+ G + + D
Sbjct: 93 AMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPT 152
Query: 160 DGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERN 219
+G+ ++ + A P R E + L++ Y P F L
Sbjct: 153 EGVKRLSKFSVA-----PTR-ENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATR 206
Query: 220 ELIEALF-----KGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILK 274
+ ++ G ++ ++ QP L+IWG D+V P++ A + + A+L +
Sbjct: 207 AMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLHVFG 265
Query: 275 KVGHAVNMEKPKEMYKSMKAFL 296
+ GH V +EK E K FL
Sbjct: 266 QCGHWVQVEKFDEFNKLTIEFL 287
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG S GG + A ++ +++G+++L+ G +
Sbjct: 90 NARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMGPG------GLGPS 143
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 144 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 197
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 198 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 256
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K GH E E + + FL
Sbjct: 257 LHVFSKCGHWAQWEHADEFNRLVIDFL 283
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG + GG + A ++ +++G+++L+ G +
Sbjct: 90 NARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG------GLGPS 143
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 144 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 197
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 198 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 256
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K GH E E + + FL
Sbjct: 257 LHVFSKCGHWAQWEHADEFNRLVIDFL 283
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG + GG + A ++ +++G+++L+ G +
Sbjct: 87 NARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG------GLGPS 140
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 141 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 194
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 195 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 253
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K GH E E + + FL
Sbjct: 254 LHVFSKCGHWAQWEHADEFNRLVIDFL 280
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTSRPDRSESFQ------A 103
P L L+HG W+W+ I PL ++V VPDL FGDS +PD ++ + A
Sbjct: 30 PTLLLLHG-WPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDS--EKPDLNDLSKYSLDKAA 86
Query: 104 RCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVL 146
LLDA G+ K +VVG + V + ++ ++V + +
Sbjct: 87 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAI 129
>pdb|2XUA|A Chain A, Crystal Structure Of The Enol-Lactonase From Burkholderia
Xenovorans Lb400
pdb|2XUA|H Chain H, Crystal Structure Of The Enol-Lactonase From Burkholderia
Xenovorans Lb400
Length = 266
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 37/279 (13%)
Query: 34 GTVMHCWVPKTHKQNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTS 93
GT +H + N P + L + +G + + WA ++ L F V D G S
Sbjct: 11 GTELHYRIDGERHGNAPWIVLSNSLGTD-LSXWAPQVAALSKHFRVLRYDTRGHGHSEAP 69
Query: 94 RPDRSESFQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCM 153
+ + V+GL D +A+ + G+S GG G ++AA+ +++ RV L C
Sbjct: 70 KGPYTIEQLTGDVLGLXDTLKIARANFCGLSXGGLTGVALAARHADRIERVAL-C----- 123
Query: 154 EEKDMDDGLFKVMNINEAAEILFPQ--RPEKMRQLLKLTFYKPPKSIPSCFFSDFI---- 207
N AA I P+ P ++ + +P F +D+
Sbjct: 124 ---------------NTAARIGSPEVWVPRAVKARTEGXHALADAVLPRWFTADYXEREP 168
Query: 208 -------GVMCTTYLEERNELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRL 260
V T E EA+ + P I P L+I G HD L
Sbjct: 169 VVLAXIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGREL 228
Query: 261 KRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLTDQ 299
+ + +++ H N+E+ K++ FLT+Q
Sbjct: 229 AQAIAGARYVEL--DASHISNIERADAFTKTVVDFLTEQ 265
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG S GG + A ++ +++G+++L+ G +
Sbjct: 90 NARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMGPG------GLGPS 143
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 144 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 197
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 198 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 256
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K G E E + + FL
Sbjct: 257 LHVFSKCGQWAQWEHADEFNRLVIDFL 283
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG + GG + A ++ +++G+++L+ G +
Sbjct: 90 NARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG------GLGPS 143
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 144 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 197
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 198 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 256
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K G E E + + FL
Sbjct: 257 LHVFSKCGQWAQWEHADEFNRLVIDFL 283
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 102 QARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDG 161
AR V GL+DA + + H+VG + GG + A ++ +++G+++L+ G +
Sbjct: 90 NARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG------GLGPS 143
Query: 162 LFKVMNINEAAEILFP--QRP--EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+F M + E ++LF P E ++Q+L++ Y S + + +
Sbjct: 144 MFAPMPM-EGIKLLFKLYAEPSYETLKQMLQVFLYD-----QSLITEELLQGRWEAIQRQ 197
Query: 218 RNELIEALFKGRK--------LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAE 269
L L +K + L +I T I WG D+ P++ +L ++ D+A
Sbjct: 198 PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDAR 256
Query: 270 LKILKKVGHAVNMEKPKEMYKSMKAFL 296
L + K G E E + + FL
Sbjct: 257 LHVFSKCGAWAQWEHADEFNRLVIDFL 283
>pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G5X|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G9E|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
pdb|4G9E|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
Length = 279
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 106/265 (40%), Gaps = 20/265 (7%)
Query: 41 VPKTHKQNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTS-RPDRSE 99
V ++ + P L +IHG ++ + K+ V PDL G S + PDRS
Sbjct: 17 VRESEGEGAP-LLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY 75
Query: 100 SFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKD 157
S + A + ++ G+A V G S GG +G M A++ E G ++ V EE
Sbjct: 76 SMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREE-- 133
Query: 158 MDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+ G ++ A + +F +R + + T +P F + + ++ T
Sbjct: 134 VGQGFKSGPDMALAGQEIFSER--DVESYARSTCGEP-------FEASLLDIVARTDGRA 184
Query: 218 RNELIEALFKGR--KLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELK--IL 273
R + E G D+ Q + + D+ F VEL K G+ E K ++
Sbjct: 185 RRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPF-VELDFVSKVKFGNLWEGKTHVI 243
Query: 274 KKVGHAVNMEKPKEMYKSMKAFLTD 298
GHA E P E + F+ D
Sbjct: 244 DNAGHAPFREAPAEFDAYLARFIRD 268
>pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium
Smegmatis
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 46/225 (20%)
Query: 99 ESFQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDM 158
+ F A C A G+ + HV+G S+GG +G +A R+ G L+ +C M
Sbjct: 114 DEFHAVCT-----ALGIERYHVLGQSWGGMLGAEIA--VRQPSG---LVSLAICNSPASM 163
Query: 159 DDGLFKVMNINEAAEILFPQRPEKMRQLL-----------------KLTFYKPP--KSIP 199
L+ +EAA L Q P + R L FY+ + +P
Sbjct: 164 R--LW-----SEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVP 216
Query: 200 SCF-FSDFIGVM---CTTY--LEERNE--LIEALFKGRKLSDLPKITQPTLIIWGEHDQV 251
+ F+D + M T Y + NE ++ L + LP +T P L+I GEHD+
Sbjct: 217 TPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEA 276
Query: 252 FPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFL 296
P + H+ D + H ++EKP+E + FL
Sbjct: 277 TP-KTWQPFVDHIPD-VRSHVFPGTSHCTHLEKPEEFRAVVAQFL 319
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D KI Q TL++WG D V P+ L+ + + L+I++ GH V +EKP+E +
Sbjct: 142 DXKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKPEEFVRIT 200
Query: 293 KAFL 296
FL
Sbjct: 201 VDFL 204
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 47 QNKPNLCLIHGIGANAM-WQWADFISPLISK--FNVYVPDLLFFGDSYTSRP---DRSE- 99
N+ ++ L HG + W AD + SK +NVY PD FG S +S DR +
Sbjct: 25 SNRRSIALFHGYSFTSXDWDKADLFNNY-SKIGYNVYAPDYPGFGRSASSEKYGIDRGDL 83
Query: 100 SFQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLIC 148
A + L A+GVA++ + G S GG Q+ + V ++ +
Sbjct: 84 KHAAEFIRDYLKANGVARSVIXGASXGGGXVIXTTLQYPDIVDGIIAVA 132
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D+ KI PTL+I G+ DQ+ P E ++ L AELK+ K H + +++ + +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 293 KAFL 296
AFL
Sbjct: 266 LAFL 269
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D+ KI PTL+I G+ DQ+ P E ++ L AELK+ K H + +++ + +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 293 KAFL 296
AFL
Sbjct: 266 LAFL 269
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D+ KI PTL+I G+ DQ+ P E ++ L AELK+ K H + +++ + +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 293 KAFL 296
AFL
Sbjct: 266 LAFL 269
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D+ KI PTL+I G+ DQ+ P E ++ L AELK+ K H + +++ + +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 293 KAFL 296
AFL
Sbjct: 266 LAFL 269
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSM 292
D+ KI PTL+I G+ DQ+ P E ++ L AELK+ K H + +++ + +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 293 KAFL 296
AFL
Sbjct: 266 LAFL 269
>pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G8C|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G9G|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
pdb|4G9G|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 20/265 (7%)
Query: 41 VPKTHKQNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTS-RPDRSE 99
V ++ + P L +IHG ++ + K+ V PDL G S + PDRS
Sbjct: 17 VRESEGEGAP-LLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY 75
Query: 100 SFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKD 157
S + A + ++ G+A V G S GG +G M A++ E G ++ V EE
Sbjct: 76 SMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREE-- 133
Query: 158 MDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+ G ++ A + +F +R + + T +P F + + ++ T
Sbjct: 134 VGQGFKSGPDMALAGQEIFSER--DVESYARSTCGEP-------FEASLLDIVARTDGRA 184
Query: 218 RNELIEALFKGR--KLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELK--IL 273
R + E G D+ Q + + D F VEL K G+ E K ++
Sbjct: 185 RRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDGPF-VELDFVSKVKFGNLWEGKTHVI 243
Query: 274 KKVGHAVNMEKPKEMYKSMKAFLTD 298
GHA E P E + F+ D
Sbjct: 244 DNAGHAPFREAPAEFDAYLARFIRD 268
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 20/240 (8%)
Query: 65 QWADFISPLISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMGLLD----AHGVAKTHV 120
W + I L + V D+L FG T++PD E Q R + L D + K +
Sbjct: 54 NWRNVIPILARHYRVIAMDMLGFGK--TAKPD-IEYTQDRRIRHLHDFIKAMNFDGKVSI 110
Query: 121 VGMSYGGFVGYSMAAQFREKVGRVVLI-CAGVCMEEKDMDDGLFKVMNINEAAEILFPQR 179
VG S GG G ++ E V +VL+ AG+ +E + + L ++N + E +
Sbjct: 111 VGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVE---IHEDLRPIINYDFTREGMV--- 164
Query: 180 PEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERNELIE--ALFKGRKLSDLPKI 237
++ L F I S + Y+ + E LF + + K+
Sbjct: 165 -HLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEF--IRKV 221
Query: 238 TQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLT 297
PTL++ G+ D+V PVE A++ L D++ I+ GH +E P++ + +FL+
Sbjct: 222 QVPTLVVQGKDDKVVPVETAYKF-LDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLS 280
>pdb|4G8B|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8B|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8D|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
pdb|4G8D|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
Length = 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 20/265 (7%)
Query: 41 VPKTHKQNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTS-RPDRSE 99
V ++ + P L +IHG ++ + K+ V PDL G S + PDRS
Sbjct: 17 VRESEGEGAP-LLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSY 75
Query: 100 SFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKD 157
S + A + ++ G+A V G GG +G M A++ E G ++ V EE
Sbjct: 76 SMEGYADAMTEVMQQLGIADAVVFGWGLGGHIGIEMIARYPEMRGLMITGTPPVAREE-- 133
Query: 158 MDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEE 217
+ G ++ A + +F +R + + T +P F + + ++ T
Sbjct: 134 VGQGFKSGPDMALAGQEIFSER--DVESYARSTCGEP-------FEASLLDIVARTDGRA 184
Query: 218 RNELIEALFKGR--KLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELK--IL 273
R + E G D+ Q + + D+ F VEL K G+ E K ++
Sbjct: 185 RRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPF-VELDFVSKVKFGNLWEGKTHVI 243
Query: 274 KKVGHAVNMEKPKEMYKSMKAFLTD 298
GHA E P E + F+ D
Sbjct: 244 DNAGHAPFREAPAEFDAYLARFIRD 268
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 18/255 (7%)
Query: 47 QNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTSRPDR---SESFQA 103
++ P L L+HG ++ W I+ SK+ Y D++ GD S P+ + + A
Sbjct: 65 EDAPPLVLLHGALFSST-XWYPNIADWSSKYRTYAVDII--GDKNKSIPENVSGTRTDYA 121
Query: 104 RCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLF 163
++ + D G+ K+H +G+S GG + + E+V ++ D +
Sbjct: 122 NWLLDVFDNLGIEKSHXIGLSLGGLHTXNFLLRXPERVKSAAILSPAETFLPFHHDFYKY 181
Query: 164 KVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERNELIE 223
+ F + +L F K K+ GV N +
Sbjct: 182 ALGLTASNGVETFLNWXXNDQNVLHPIFVKQFKA----------GVXWQDGSRNPNPNAD 231
Query: 224 ALFKGRKLSDLPKITQPTLIIWGEHDQVF-PVELAHRLKRHLGDNAELKILKKVGHAVNM 282
+L P L++ GEH+ ++ P HR + D E +++K GH ++
Sbjct: 232 GFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPD-IEAEVIKNAGHVLSX 290
Query: 283 EKPKEMYKSMKAFLT 297
E+P + + + F
Sbjct: 291 EQPTYVNERVXRFFN 305
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 222 IEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVN 281
I A K DL K PTLII G+ D P E + +L N+++ ++K H +N
Sbjct: 205 ITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLN 264
Query: 282 MEKPKEMYKSMKAFLTD 298
KE +++ FL D
Sbjct: 265 ATHAKEFNEALLLFLKD 281
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 52/289 (17%)
Query: 46 KQNKPNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYTSRPDRSE-SFQ- 102
K N + L HG A W I L + + V D + F S S+P + SFQ
Sbjct: 43 KANGRTILLXHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKS--SKPAHYQYSFQQ 99
Query: 103 -ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEE------ 155
A LL+ GVA+ V+G S GG + A + +V R+VL+ + +E+
Sbjct: 100 LAANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLVLVNP-IGLEDWKALGV 158
Query: 156 --KDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTT 213
+ +DD + + + E +RQ + T+Y + P F ++
Sbjct: 159 PWRSVDDWYRRDLQTSA----------EGIRQYQQATYYA-GEWRPE--FDRWVQXQAGX 205
Query: 214 YLEERNELI--------EALFKGRKLSDLPKITQPTLIIWGEHDQV------FPVELAHR 259
Y + E + + +F + +L ++ PTL++ GE D P EL R
Sbjct: 206 YRGKGRESVAWNSALTYDXIFTQPVVYELDRLQXPTLLLIGEKDNTAIGKDAAPAELKAR 265
Query: 260 LKRH--LGDNAELKI-------LKKVGHAVNMEKPKEMYKSMKAFLTDQ 299
L + LG +A +I +GH ++ P+ ++++ L Q
Sbjct: 266 LGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314
>pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas
Aeruginosa Pa01
pdb|3OM8|B Chain B, The Crystal Structure Of A Hydrolase From Pseudomonas
Aeruginosa Pa01
Length = 266
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 16/251 (6%)
Query: 49 KPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMG 108
KP L L + IG + W + L F V D G S + + V+
Sbjct: 27 KPLLALSNSIGTT-LHXWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLE 85
Query: 109 LLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCM-EEKDMDDGLFKVMN 167
LLDA V + H +G+S GG VG +A +++ R+VL + D+ + V+
Sbjct: 86 LLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQ 145
Query: 168 INEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSC--FFSDFIGVMCTTYLEERNELIEAL 225
+ +E L + PP + F + T A+
Sbjct: 146 AEDXSETAAG----------FLGNWFPPALLERAEPVVERFRAXLXATNRHGLAGSFAAV 195
Query: 226 FKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKP 285
+ L +I +PTL+I G +D V + + A L L V H N+E P
Sbjct: 196 RDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTLPAV-HLSNVEFP 253
Query: 286 KEMYKSMKAFL 296
+ ++ +FL
Sbjct: 254 QAFEGAVLSFL 264
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 233 DLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNM 282
DL K PTL++ G+ DQV P++ R + NAELK+ + H + M
Sbjct: 207 DLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM 256
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 43 KTHKQNKPNLCLIHGIGANA-MWQWADFISPLISKFNVYVPDLLFFGDSYTSRPDRSESF 101
+T Q +L L+HG G NA +W+ D L S F +++ DL FG RS F
Sbjct: 7 QTKGQGNVHLVLLHGWGLNAEVWRCID--EELSSHFTLHLVDLPGFG--------RSRGF 56
Query: 102 QARCVMGLLDA---HGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDM 158
A + + +A K +G + GG V +A E+V +V + + C +D
Sbjct: 57 GALSLADMAEAVLQQAPDKAIWLGWALGGLVASQIALTHPERVQALVTVASSPCFSARDE 116
Query: 159 DDGL 162
G+
Sbjct: 117 WPGI 120
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 43 KTHKQNKPNLCLIHGIGANA-MWQWADFISPLISKFNVYVPDLLFFGDSYTSRPDRSESF 101
+T Q +L L+HG G NA +W+ D L S F +++ DL FG RS F
Sbjct: 7 QTKGQGNVHLVLLHGWGLNAEVWRCID--EELSSHFTLHLVDLPGFG--------RSRGF 56
Query: 102 QARCVMGLLDA---HGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDM 158
A + +A K +G S GG V +A E+V +V + + C +D
Sbjct: 57 GALSLADXAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDE 116
Query: 159 DDGL 162
G+
Sbjct: 117 WPGI 120
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 220 ELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHA 279
+ I+A + DL KI PTL++ G+ DQV P+E + L + LKI H
Sbjct: 195 DCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHG 254
Query: 280 VNMEKPKEMYKSMKAFL 296
+ ++ + AF+
Sbjct: 255 LTDTHKDQLNADLLAFI 271
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 6/186 (3%)
Query: 116 AKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICA--GVCMEEKDMDDGLFKVMNINEAAE 173
HV + GG V MA +KV + VLI A + ++ GL K + A+
Sbjct: 90 GAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQ 149
Query: 174 ILFPQRPEKMRQLLKLTFY---KPPKSIPSCFFSDFIGVMCTTYLEERNELIEALFKGRK 230
+ R + R + FY +P ++ + + I A +
Sbjct: 150 VA-SNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDF 208
Query: 231 LSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYK 290
DL I QP L++ G+ DQ+ P E + L L N LK K H + +
Sbjct: 209 TEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINA 268
Query: 291 SMKAFL 296
+ AF+
Sbjct: 269 DLLAFI 274
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 211 CTTYLEERNELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAEL 270
C+T + +A F DL K+T P+LI+ D + P + + +HL + L
Sbjct: 183 CSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL-PYSSL 241
Query: 271 KILKKVGHAVNMEKPKEMYKSMKAFL 296
K ++ GH +M P E + + +L
Sbjct: 242 KQMEARGHCPHMSHPDETIQLIGDYL 267
>pdb|4IH4|A Chain A, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|B Chain B, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|C Chain C, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|D Chain D, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
Length = 267
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 240 PTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLTDQ 299
PT +I D P +A L+ HLG + ++ LK GH + P ++ + FL
Sbjct: 209 PTCVIQTAKDVSVPASVAEYLRSHLGGDTTVETLKTEGHLPQLSAPAQLAQ----FLRRA 264
Query: 300 LPQ 302
LP+
Sbjct: 265 LPR 267
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 234 LPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMK 293
L +I PTLI+ GE+D+ F V++A ++ +L N++ K++ GH +++E E +
Sbjct: 203 LKEIKVPTLILAGEYDEKF-VQIAKKMA-NLIPNSKCKLISATGHTIHVEDSDEFDTMIL 260
Query: 294 AFLTDQ 299
FL ++
Sbjct: 261 GFLKEE 266
>pdb|1Q0R|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (Rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin T (Dcmat)
pdb|1Q0Z|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin A (dcma)
Length = 298
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 26/201 (12%)
Query: 103 ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGL 162
A + +LD GV + HVVG+S G + +A +++ + ++ G + D D +
Sbjct: 81 AADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGL--DIDFDANI 138
Query: 163 FKVMNINEAAEIL-FPQRP-----EKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCT---- 212
+VM + L PQ+P M Q + + K + GV
Sbjct: 139 ERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEY 198
Query: 213 TYLEER------NELIE-------ALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHR 259
EER L E L + ++L ++T PTL+I EHD + P
Sbjct: 199 ARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKH 258
Query: 260 LKRHLGDNAELKILKKVGHAV 280
L L A L + +GHA+
Sbjct: 259 LAG-LIPTARLAEIPGMGHAL 278
>pdb|3FSG|D Chain D, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 16/237 (6%)
Query: 69 FISPL--ISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMGLLDAHGVAKTHVVGMSYG 126
F PL + ++ DL G+S P S++ + + + G + + G SYG
Sbjct: 40 FFEPLSNVGQYQRIYLDLPGXGNSDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYG 99
Query: 127 GFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQL 186
G++ ++A +++ V L C + + G K +NI E P + ++
Sbjct: 100 GYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTG--KHINILEE-----DINPVENKEY 152
Query: 187 LKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERNELIEALFKGRKLSDLPKITQ-----PT 241
F I + + D+ ++ +E I+ L + K+ P
Sbjct: 153 FA-DFLSXNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPF 211
Query: 242 LIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFLTD 298
I G +DQV + +L H +N E+ +L + GH + +++ + + FL +
Sbjct: 212 KIXVGRNDQVVGYQEQLKLINH-NENGEIVLLNRTGHNLXIDQREAVGFHFDLFLDE 267
>pdb|3FSG|A Chain A, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|B Chain B, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|C Chain C, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 100/254 (39%), Gaps = 17/254 (6%)
Query: 52 LCLIHGIGANAMWQWADFISPL--ISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMGL 109
+ +HG+ + F PL + ++ DL G+S P S++ + +
Sbjct: 24 IIFLHGLSLDKQSTXL-FFEPLSNVGQYQRIYLDLPGXGNSDPISPSTSDNVLETLIEAI 82
Query: 110 LDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFKVMNIN 169
+ G + + G SYGG++ ++A +++ V L C + + G K +NI
Sbjct: 83 EEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTG--KHINIL 140
Query: 170 EAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVMCTTYLEERNELIEALFKGR 229
E P + ++ F I + + D+ ++ +E I+ L
Sbjct: 141 EE-----DINPVENKEYFA-DFLSXNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNY 194
Query: 230 KLSDLPKITQ-----PTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEK 284
+ K+ P I G +DQV + +L H +N E+ +L + GH + +++
Sbjct: 195 SFTFEEKLKNINYQFPFKIXVGRNDQVVGYQEQLKLINH-NENGEIVLLNRTGHNLXIDQ 253
Query: 285 PKEMYKSMKAFLTD 298
+ + FL +
Sbjct: 254 REAVGFHFDLFLDE 267
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 34 GTVMHCWVPKTHKQNKPNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYT 92
GT +H Q P + L+HG + + W I L + + V D +G S
Sbjct: 18 GTRIHAVADSPPDQQGPLVVLLHGF-PESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSK 76
Query: 93 SRPDRSESFQARC--VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLIC 148
R ++ + V+G+LD++G + VVG +G V ++ A ++ VV I
Sbjct: 77 YRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGIS 134
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 34 GTVMHCWVPKTHKQNKPNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYT 92
GT +H Q P + L+HG + + W I L + + V D +G S
Sbjct: 12 GTRIHAVADSPPDQQGPLVVLLHGF-PESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSK 70
Query: 93 SRPDRSESFQARC--VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLIC 148
R ++ + V+G+LD++G + VVG +G V ++ A ++ VV I
Sbjct: 71 YRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGIS 128
>pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W04|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W05|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
pdb|3W05|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
Length = 266
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 21/256 (8%)
Query: 52 LCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTSRPD-----RSESFQARC- 105
+ L HG G + W+ + L V + DL+ G + PD R ++ A
Sbjct: 20 VVLSHGFGTD-QSAWSRVLPYLTRDHRVVLYDLVCAG---SVNPDHFDFRRYDNLDAYVD 75
Query: 106 -VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFK 164
++ +LDA + + VG S +G + + + ++VLI A G F+
Sbjct: 76 DLLAILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGASPRFLNDSDYHGGFE 135
Query: 165 VMNINEAAEILFPQRPEKMRQLLKLTFYKP---PKSIPSCFFSDFIGVMCTTYLEERNEL 221
+ I + + + T Y P +P+ +F + + +
Sbjct: 136 LEEIQQVFDAMGANYSAWA------TGYAPLAVGADVPAAV-QEFSRTLFNMRPDISLHV 188
Query: 222 IEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVN 281
+ +FK L + P +++ D P +A LK HLG ++ L+ GH +
Sbjct: 189 CQTVFKTDLRGVLGMVRAPCVVVQTTRDVSVPASVAAYLKAHLGGRTTVEFLQTEGHLPH 248
Query: 282 MEKPKEMYKSMKAFLT 297
+ P + + ++ L
Sbjct: 249 LSAPSLLAQVLRRALA 264
>pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IHA|B Chain B, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IH9|A Chain A, Crystal Structure Of Rice Dwarf14 (d14)
pdb|4IH9|B Chain B, Crystal Structure Of Rice Dwarf14 (d14)
Length = 268
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 21/256 (8%)
Query: 52 LCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYTSRPD-----RSESFQARC- 105
+ L HG G + W+ + L V + DL+ G + PD R ++ A
Sbjct: 22 VVLSHGFGTD-QSAWSRVLPYLTRDHRVVLYDLVCAG---SVNPDHFDFRRYDNLDAYVD 77
Query: 106 -VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMDDGLFK 164
++ +LDA + + VG S +G + + + ++VLI A G F+
Sbjct: 78 DLLAILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGASPRFLNDSDYHGGFE 137
Query: 165 VMNINEAAEILFPQRPEKMRQLLKLTFYKP---PKSIPSCFFSDFIGVMCTTYLEERNEL 221
+ I + + + T Y P +P+ +F + + +
Sbjct: 138 LEEIQQVFDAMGANYSAWA------TGYAPLAVGADVPAAV-QEFSRTLFNMRPDISLHV 190
Query: 222 IEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVN 281
+ +FK L + P +++ D P +A LK HLG ++ L+ GH +
Sbjct: 191 CQTVFKTDLRGVLGMVRAPCVVVQTTRDVSVPASVAAYLKAHLGGRTTVEFLQTEGHLPH 250
Query: 282 MEKPKEMYKSMKAFLT 297
+ P + + ++ L
Sbjct: 251 LSAPSLLAQVLRRALA 266
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 88 GDSYTSRPDR---SESFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVG 142
G ++ PDR ++ F+ A+ + L+ A K ++G S GG AA++ +
Sbjct: 61 GYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSNGGITALIAAAKYPSYIH 120
Query: 143 RVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCF 202
++V+ A + ++D +++ E +R + K + + K + + +
Sbjct: 121 KMVIWGANAYVTDED---------------SMIY----EGIRDVSKWS-ERTRKPLEALY 160
Query: 203 FSDFIGVMCTTYLEERNELIEALFKGRKLSD-------LPKITQPTLIIWGEHDQVFPVE 255
D+ C + ++ + + + L D LP++ P LI+ GE D + P
Sbjct: 161 GYDYFARTCEKW-------VDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRF 213
Query: 256 LAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFL 296
A + +H+ + L ++ + H +++ E K + FL
Sbjct: 214 HADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 253
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 232 SDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKS 291
+D+P+I P LI+ G D+ P+E R+ +AE ++ H + +E+ +
Sbjct: 211 ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270
Query: 292 MKAFL 296
+ AFL
Sbjct: 271 LLAFL 275
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 232 SDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKS 291
+D+P+I P LI+ G D+ P+E R+ +AE ++ H + +E+ +
Sbjct: 211 ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270
Query: 292 MKAFL 296
+ AFL
Sbjct: 271 LLAFL 275
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 232 SDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKS 291
+D+P+I P LI+ G D+ P+E R+ +AE ++ H + +E+ +
Sbjct: 211 ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270
Query: 292 MKAFL 296
+ AFL
Sbjct: 271 LLAFL 275
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed With
A Product Analogue
Length = 254
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 88 GDSYTSRPDR---SESFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVG 142
G ++ PDR ++ F+ A+ + L+ A K ++G S GG AA++ +
Sbjct: 61 GYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIH 120
Query: 143 RVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCF 202
++V+ A + ++D +++ E +R + K + + K + + +
Sbjct: 121 KMVIWGANAYVTDED---------------SMIY----EGIRDVSKWS-ERTRKPLEALY 160
Query: 203 FSDFIGVMCTTYLEERNELIEALFKGRKLSD-------LPKITQPTLIIWGEHDQVFPVE 255
D+ C + ++ + + + L D LP++ P LI+ GE D + P
Sbjct: 161 GYDYFARTCEKW-------VDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRF 213
Query: 256 LAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFL 296
A + +H+ + L ++ + H +++ E K + FL
Sbjct: 214 HADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 253
>pdb|3QVM|A Chain A, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
pdb|3QVM|B Chain B, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
Length = 282
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 30/245 (12%)
Query: 52 LCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFG----DSYTSRPDRSESFQARCVM 107
+ L HG G + W + L +F V V D + G +S++++ S A+ V
Sbjct: 31 VLLAHGFGCDQN-XWRFXLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVE 89
Query: 108 GLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLICAGVCMEEKDMD-------D 160
+L A + ++G S + + +++ + IC C D D
Sbjct: 90 EILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITXICPSPCFXNFPPDYVGGFERD 149
Query: 161 GLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCFFSDFIGVM----CTTYLE 216
L +++N+ + + + Y P + S+ IG + CTT
Sbjct: 150 DLEELINLXD-------------KNYIGWANYLAPLVXGASHSSELIGELSGSFCTTDPI 196
Query: 217 ERNELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKV 276
+A F S L I+ P LI D + E+ ++ N++L++++
Sbjct: 197 VAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYXAENI-PNSQLELIQAE 255
Query: 277 GHAVN 281
GH ++
Sbjct: 256 GHCLH 260
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 208 GVMCTTYLEERNELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDN 267
G+M +T + + + I A + +DL IT P L+I G+ DQV P + L L N
Sbjct: 192 GMMGST--KAQYDGIVAFSQTDFTNDLKGITIPVLVIHGDDDQVVPYADSGVLSAKLVKN 249
Query: 268 AELKILKKVGHAVNMEKPKEMYKSMKAFL 296
+L K H + ++ + FL
Sbjct: 250 GKLITYKGAPHGIPTTHADKVNADLLEFL 278
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYTSRPDRSESF--QARC- 105
P +CL HG + + W I L + + V D+ +G+S S P E + + C
Sbjct: 259 PAVCLCHGF-PESWYSWRYQIPALAQAGYRVLAMDMKGYGES--SAPPEIEEYCMEVLCK 315
Query: 106 -VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRV 144
++ LD G+++ +G +GG + + MA + E+V V
Sbjct: 316 EMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAV 355
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 94/221 (42%), Gaps = 40/221 (18%)
Query: 88 GDSYTSRPDR---SESFQ--ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVG 142
G ++ PDR ++ F+ A+ + L+ A K ++G + GG AA++ +
Sbjct: 61 GYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWADGGITALIAAAKYPSYIH 120
Query: 143 RVVLICAGVCMEEKDMDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPPKSIPSCF 202
++V+ A + ++D +++ E +R + K + + K + + +
Sbjct: 121 KMVIWGANAYVTDED---------------SMIY----EGIRDVSKWS-ERTRKPLEALY 160
Query: 203 FSDFIGVMCTTYLEERNELIEALFKGRKLSD-------LPKITQPTLIIWGEHDQVFPVE 255
D+ C + ++ + + + L D LP++ P LI+ GE D + P
Sbjct: 161 GYDYFARTCEKW-------VDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRF 213
Query: 256 LAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAFL 296
A + +H+ + L ++ + H +++ E K + FL
Sbjct: 214 HADFIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 253
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYTSRPDRSESF--QARC- 105
P +CL HG + + W I L + + V D+ +G+S S P E + + C
Sbjct: 40 PAVCLCHGF-PESWYSWRYQIPALAQAGYRVLAMDMKGYGES--SAPPEIEEYCMEVLCK 96
Query: 106 -VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRV 144
++ LD G+++ +G +GG + + MA + E+V V
Sbjct: 97 EMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAV 136
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 220 ELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHA 279
E I A + DL +I P L+ G DQV P A L NA LK + + H
Sbjct: 197 ECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHG 256
Query: 280 VNMEKPKEMYKSMKAFL 296
+ P+ + + AF+
Sbjct: 257 MLSTHPEVLNPDLLAFV 273
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLI-SKFNVYVPDLLFFGDSYTSRPDRSESF--QARC- 105
P +CL HG + + W I L + + V D+ +G+S S P E + + C
Sbjct: 55 PAVCLCHGF-PESWYSWRYQIPALAQAGYRVLAMDMKGYGES--SAPPEIEEYCMEVLCK 111
Query: 106 -VMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVV 145
++ LD G+++ +G +GG + + MA + E+V V
Sbjct: 112 EMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVA 152
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 46 KQNKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDSYT---SRPDRSESFQ 102
K + P L L+HG + W L ++V + DL +G+S D S++
Sbjct: 28 KGSGPPLLLLHGYPQTHL-AWHRIAPRLAEDYSVVLADLRGYGESRALDEEGADYSKAAL 86
Query: 103 ARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVV 145
AR + + G + V+G G VGY +A + V V
Sbjct: 87 ARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFV 129
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 236 KITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKAF 295
+ P LI++G+ D + H LK+ N + I+K GH ++KP+E + + F
Sbjct: 149 SVKTPALIVYGDQDPMGQTSFEH-LKQL--PNHRVLIMKGAGHPCYLDKPEEWHTGLLDF 205
Query: 296 L 296
L
Sbjct: 206 L 206
>pdb|2XLB|A Chain A, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|B Chain B, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|C Chain C, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|D Chain D, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|E Chain E, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|F Chain F, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|G Chain G, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|H Chain H, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|I Chain I, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|J Chain J, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|K Chain K, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
pdb|2XLB|L Chain L, Acetyl Xylan Esterase From Bacillus Pumilus Without
Ligands
Length = 320
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 237 ITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGH 278
+ QPTL+ G DQV P HL + ELK+ + GH
Sbjct: 257 VKQPTLMAIGLIDQVTPPSTVFAAYNHLETDKELKVYRYFGH 298
>pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I
Length = 297
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 78 NVYVPDLLFFG--DSYTSRPDRSESFQARCVMGLLDAHGVAKTHVVGMSYGGFVGYSMAA 135
V PDL FG D T + F R ++ LDA + + +V +GG +G ++
Sbjct: 75 RVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPV 134
Query: 136 QFREKVGRVVLICAGVCM 153
+ V R++++ + +
Sbjct: 135 DRPQLVDRLIVMNTALAV 152
>pdb|3P2M|A Chain A, Crystal Structure Of A Novel Esterase Rv0045c From
Mycobacterium Tuberculosis
Length = 330
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 100/265 (37%), Gaps = 33/265 (12%)
Query: 48 NKPNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDS-YTSRPDRSESFQARCV 106
+ P + +HG G NA W I L DL G S + + S + +
Sbjct: 80 SAPRVIFLHGGGQNAH-TWDTVIVGLGEP--ALAVDLPGHGHSAWREDGNYSPQLNSETL 136
Query: 107 MGLLDAHGVAKTHVVGMSYGGFVGYSMAAQFREKVGRVVLI---------CAGVCMEEKD 157
+L VVGMS GG +AA + VG +VL+ A + E++
Sbjct: 137 APVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR- 195
Query: 158 MDDGLFKVMNINEAAEILFPQRPEKMRQLLKLTFYKPP----KSIPSCFFSDFIGVMCTT 213
G +M+ E FP + +L LT P KS+ F + +
Sbjct: 196 ---GTVALMH----GEREFP----SFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGN 244
Query: 214 YLEERNELIEAL--FKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELK 271
++ R + I F G D+ ++ P ++ G + L R +
Sbjct: 245 WV-WRYDAIRTFGDFAG-LWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVH 302
Query: 272 ILKKVGHAVNMEKPKEMYKSMKAFL 296
I++K GH+V ++P+ + + ++ L
Sbjct: 303 IVEKSGHSVQSDQPRALIEIVRGVL 327
>pdb|2WJ3|A Chain A, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a
pdb|2WJ3|B Chain B, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a
pdb|2WJ3|C Chain C, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a
pdb|2WJ3|D Chain D, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a
pdb|2WJ4|A Chain A, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Anaerobically Complexed With Its
Natural Substrate 1-H-3-Hydroxy-4-Oxoquinaldine
pdb|2WJ4|B Chain B, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Anaerobically Complexed With Its
Natural Substrate 1-H-3-Hydroxy-4-Oxoquinaldine
pdb|2WJ4|C Chain C, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Anaerobically Complexed With Its
Natural Substrate 1-H-3-Hydroxy-4-Oxoquinaldine
pdb|2WJ4|D Chain D, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Anaerobically Complexed With Its
Natural Substrate 1-H-3-Hydroxy-4-Oxoquinaldine
pdb|2WJ6|A Chain A, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Complexed With Its Natural
Product N-Acetylanthranilate
pdb|2WJ6|B Chain B, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Complexed With Its Natural
Product N-Acetylanthranilate
pdb|2WJ6|C Chain C, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Complexed With Its Natural
Product N-Acetylanthranilate
pdb|2WJ6|D Chain D, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a Complexed With Its Natural
Product N-Acetylanthranilate
Length = 276
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 69 FISPLISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMGLLDAHGVAKTHVVGMSYGGF 128
I L + F V VP+ G S + PD Q + + +LD GV V S+GG+
Sbjct: 46 LIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGW 105
Query: 129 VGYSMAAQ 136
V + Q
Sbjct: 106 VLVELLEQ 113
>pdb|2WM2|A Chain A, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a In Complex With Chloride
pdb|2WM2|B Chain B, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a In Complex With Chloride
pdb|2WM2|C Chain C, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a In Complex With Chloride
pdb|2WM2|D Chain D, Crystal Structure Of The Cofactor-Devoid 1-H-3-Hydroxy-4-
Oxoquinaldine 2,4-Dioxygenase (Hod) From Arthrobacter
Nitroguajacolicus Ru61a In Complex With Chloride
Length = 279
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 69 FISPLISKFNVYVPDLLFFGDSYTSRPDRSESFQARCVMGLLDAHGVAKTHVVGMSYGGF 128
I L + F V VP+ G S + PD Q + + +LD GV V S+GG+
Sbjct: 49 LIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGW 108
Query: 129 VGYSMAAQ 136
V + Q
Sbjct: 109 VLVELLEQ 116
>pdb|2XLC|A Chain A, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
pdb|2XLC|B Chain B, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
pdb|2XLC|C Chain C, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
pdb|2XLC|D Chain D, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
pdb|2XLC|E Chain E, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
pdb|2XLC|F Chain F, Acetyl Xylan Esterase From Bacillus Pumilus Cect5072 Bound
To Paraoxon
Length = 320
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 237 ITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGH 278
+ QPTL G DQV P HL + ELK+ + GH
Sbjct: 257 VKQPTLXAIGLIDQVTPPSTVFAAYNHLETDKELKVYRYFGH 298
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDS 90
P + L+HG G ++W + L +F V PDL G S
Sbjct: 31 PLVMLVHGFG-QTWYEWHQLMPELAKRFTVIAPDLPGLGQS 70
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDS 90
P + L+HG G ++W + L +F V PDL G S
Sbjct: 31 PLVMLVHGFG-QTWYEWHQLMPELAKRFTVIAPDLPGLGQS 70
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 50 PNLCLIHGIGANAMWQWADFISPLISKFNVYVPDLLFFGDS 90
P + L+HG G ++W + L +F V PDL G S
Sbjct: 31 PLVMLVHGFG-QTWYEWHQLMPELAKRFTVIAPDLPGLGQS 70
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 223 EALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNM 282
+ +F+ LP +T P I+ D PV ++ L +LG + ++++ GH +
Sbjct: 191 QTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLPQL 250
Query: 283 EKPKEM 288
P +
Sbjct: 251 SSPDSV 256
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 223 EALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNM 282
+ +F+ LP +T P I+ D PV ++ L +LG + ++++ GH +
Sbjct: 193 QTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLPQL 252
Query: 283 EKPKEM 288
P +
Sbjct: 253 SSPDSV 258
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 223 EALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGHAVNM 282
+ +F+ LP +T P I+ D PV ++ L +LG + ++++ GH +
Sbjct: 209 QTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLPQL 268
Query: 283 EKPKEM 288
P +
Sbjct: 269 SSPDSV 274
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 232 SDLPKITQPTLIIWGEHDQVFPVELAHRL 260
+D+P+I P LI+ G D+ P+E R+
Sbjct: 212 ADIPRIDVPALILHGTGDRTLPIENTARV 240
>pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|B Chain B, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|C Chain C, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|D Chain D, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|E Chain E, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|F Chain F, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|G Chain G, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|H Chain H, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
Length = 246
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 208 GVMC-TTYLEERNELIEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAHRLKRHL-- 264
G+M +TYL + FKG K++ + K P L+ G DQV P L H L L
Sbjct: 159 GIMALSTYLPAWDN-----FKG-KITSINK-GLPILVCHGTDDQVLPEVLGHDLSDKLKV 211
Query: 265 -GDNAELKILKKVGHAVNMEKPKEM 288
G E K + H+V ME+ K++
Sbjct: 212 SGFANEYKHYVGMQHSVCMEEIKDI 236
>pdb|1TMO|A Chain A, Trimethylamine N-Oxide Reductase From Shewanella Massilia
Length = 829
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 200 SCFFSDFIGVMCTTYLEERNEL-IEALFKGRKLSDLPKITQPTLIIWGEHDQVFPVELAH 258
+C FSD + CTTY ERN++ + + R + + K+ +P D + E+
Sbjct: 505 TCRFSDIVLPACTTY--ERNDIDVYGAYANRGILAMQKMVEPLF------DSLSDFEIFT 556
Query: 259 RLKRHLGDNAELKILKKVGHAVNMEKPKEMYKSMKA 294
R LG E + +G ME + +Y KA
Sbjct: 557 RFAAVLGKEKEYT--RNMGE---MEWLETLYNECKA 587
>pdb|3FYU|A Chain A, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|B Chain B, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|D Chain D, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|H Chain H, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|I Chain I, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
Length = 320
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 237 ITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGH 278
+ QPTL+ G D++ P HL + +LK+ + GH
Sbjct: 257 VKQPTLMAIGLIDKITPPSTVFAAYNHLETDKDLKVYRYFGH 298
>pdb|3FYT|A Chain A, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|B Chain B, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|C Chain C, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|D Chain D, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|E Chain E, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|F Chain F, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|G Chain G, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|H Chain H, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|I Chain I, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|L Chain L, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|M Chain M, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
pdb|3FYT|N Chain N, Crystal Structure Of Bacillus Pumilus Acetyl Xylan
Esterase S181a Mutant In Complex With
Beta-D-Xylopyranose
Length = 320
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 237 ITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGH 278
+ QPTL+ G D++ P HL + +LK+ + GH
Sbjct: 257 VKQPTLMAIGLIDKITPPSTVFAAYNHLETDKDLKVYRYFGH 298
>pdb|3FVR|A Chain A, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|B Chain B, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|C Chain C, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|D Chain D, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|E Chain E, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|F Chain F, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|G Chain G, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|H Chain H, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|I Chain I, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|L Chain L, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|M Chain M, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVR|N Chain N, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form I
pdb|3FVT|A Chain A, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|B Chain B, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|C Chain C, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|D Chain D, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|E Chain E, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|F Chain F, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|G Chain G, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|H Chain H, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|I Chain I, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|L Chain L, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|M Chain M, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FVT|N Chain N, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus, Monoclinic Crystal Form Ii
pdb|3FYU|C Chain C, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|E Chain E, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|F Chain F, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|G Chain G, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|L Chain L, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|M Chain M, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
pdb|3FYU|N Chain N, Crystal Structure Of Acetyl Xylan Esterase From Bacillus
Pumilus Obtained In Presence Of D-Xylose And Sodium
Acetate
Length = 320
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 237 ITQPTLIIWGEHDQVFPVELAHRLKRHLGDNAELKILKKVGH 278
+ QPTL+ G D++ P HL + +LK+ + GH
Sbjct: 257 VKQPTLMAIGLIDKITPPSTVFAAYNHLETDKDLKVYRYFGH 298
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,471,857
Number of Sequences: 62578
Number of extensions: 391857
Number of successful extensions: 1204
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1120
Number of HSP's gapped (non-prelim): 89
length of query: 315
length of database: 14,973,337
effective HSP length: 99
effective length of query: 216
effective length of database: 8,778,115
effective search space: 1896072840
effective search space used: 1896072840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)