Query 021270
Match_columns 315
No_of_seqs 160 out of 459
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 15:14:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021270.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021270hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bvyf_ c.23.5.1 (F:) FMN-bind 8.5 43 0.0032 25.4 0.5 28 229-256 83-110 (152)
2 d1vl6a2 c.58.1.3 (A:1-154) Mal 6.3 69 0.005 25.2 0.8 11 231-241 66-76 (154)
3 d1ja1a2 c.23.5.2 (A:63-239) NA 5.9 52 0.0038 25.8 -0.2 27 229-256 103-129 (177)
4 d2axtj1 f.23.32.1 (J:7-40) Pho 4.8 1.8E+02 0.013 16.9 1.8 14 187-200 14-27 (34)
5 d1ykga1 c.23.5.2 (A:63-208) Su 4.6 81 0.0059 23.7 0.1 26 229-255 82-107 (146)
6 d2axtt1 f.23.34.1 (T:1-30) Pho 4.4 1.2E+02 0.0089 17.0 0.8 12 190-201 12-23 (30)
7 d1tlla2 c.23.5.2 (A:750-951) N 3.2 1.2E+02 0.0085 23.8 -0.2 27 229-256 127-153 (202)
8 d1nixa_ g.3.6.2 (A:) Hainantox 3.1 1.8E+02 0.013 16.6 0.7 9 236-244 4-12 (33)
9 d2b3na1 d.38.1.4 (A:6-159) Hyp 3.1 2E+02 0.015 21.2 1.2 14 235-248 71-84 (154)
10 d1hyka_ g.3.5.1 (A:) Agouti-re 3.0 2E+02 0.015 17.6 0.9 28 288-315 5-32 (46)
No 1
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=8.47 E-value=43 Score=25.35 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=23.4
Q ss_pred CCCceeccCCCeechhHHHHHHHHhhhc
Q 021270 229 ARPFSMLGLGDIVIPGIFVALALRFDVS 256 (315)
Q Consensus 229 ~~~~s~LGlGDIviPGlfia~~lRfD~~ 256 (315)
..+|+++|+||---|=-|......+|..
T Consensus 83 ~~~~aV~GlGds~Y~~~fc~~~~~ld~~ 110 (152)
T d1bvyf_ 83 GVRYSVFGCGDKNWATTYQKVPAFIDET 110 (152)
T ss_dssp TCCEEEEEEECTTSGGGTTHHHHHHHHH
T ss_pred CceeeeeeccccchhhhhhhHHHHHHHH
Confidence 4689999999998887788888888864
No 2
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}
Probab=6.33 E-value=69 Score=25.16 Aligned_cols=11 Identities=45% Similarity=0.679 Sum_probs=9.1
Q ss_pred CceeccCCCee
Q 021270 231 PFSMLGLGDIV 241 (315)
Q Consensus 231 ~~s~LGlGDIv 241 (315)
+-+.||||||=
T Consensus 66 GtaVLGLGniG 76 (154)
T d1vl6a2 66 GSAVLGLGNIG 76 (154)
T ss_dssp STTBTTTBSCC
T ss_pred CceeecCCCcc
Confidence 45899999985
No 3
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.94 E-value=52 Score=25.78 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=21.5
Q ss_pred CCCceeccCCCeechhHHHHHHHHhhhc
Q 021270 229 ARPFSMLGLGDIVIPGIFVALALRFDVS 256 (315)
Q Consensus 229 ~~~~s~LGlGDIviPGlfia~~lRfD~~ 256 (315)
..+|+++|+||---| -|.....++|..
T Consensus 103 ~~~yaVfGlGds~Y~-~Fc~a~~~l~~~ 129 (177)
T d1ja1a2 103 GVKFAVFGLGNKTYE-HFNAMGKYVDQR 129 (177)
T ss_dssp TCEEEEEEEECSSSS-STTHHHHHHHHH
T ss_pred CceEEEEecCCccHH-HHHHHHHHHHHH
Confidence 468999999999887 577777777754
No 4
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=4.82 E-value=1.8e+02 Score=16.94 Aligned_cols=14 Identities=43% Similarity=1.077 Sum_probs=10.5
Q ss_pred HHHHHHHHHhhhhe
Q 021270 187 GAILLAGLFVYDIF 200 (315)
Q Consensus 187 ~~ilL~~lf~YDif 200 (315)
+.+-+.|+|+|..+
T Consensus 14 ~vi~~vG~FfYGsY 27 (34)
T d2axtj1 14 GVIVIVGLFFYGAY 27 (34)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred hhHhheeeeeeeee
Confidence 46778888988754
No 5
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.63 E-value=81 Score=23.70 Aligned_cols=26 Identities=27% Similarity=0.500 Sum_probs=18.8
Q ss_pred CCCceeccCCCeechhHHHHHHHHhhh
Q 021270 229 ARPFSMLGLGDIVIPGIFVALALRFDV 255 (315)
Q Consensus 229 ~~~~s~LGlGDIviPGlfia~~lRfD~ 255 (315)
..+|+++|+||---| -|.....+.|.
T Consensus 82 ~~~~aVfGlGds~Y~-~Fc~~~~~l~~ 107 (146)
T d1ykga1 82 NTAFAVFSLGDTSYE-FFCQSGKDFDS 107 (146)
T ss_dssp TCEEEEEEECCTTSS-STTHHHHHHHH
T ss_pred CCeEEEEcCcchhHH-HHHHHHHHHHH
Confidence 357999999997775 35566666665
No 6
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=4.43 E-value=1.2e+02 Score=16.96 Aligned_cols=12 Identities=33% Similarity=0.874 Sum_probs=8.7
Q ss_pred HHHHHHhhhhee
Q 021270 190 LLAGLFVYDIFW 201 (315)
Q Consensus 190 lL~~lf~YDif~ 201 (315)
-+.++|++.|||
T Consensus 12 c~i~lfffaiff 23 (30)
T d2axtt1 12 CIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 456788888875
No 7
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.16 E-value=1.2e+02 Score=23.82 Aligned_cols=27 Identities=33% Similarity=0.527 Sum_probs=21.1
Q ss_pred CCCceeccCCCeechhHHHHHHHHhhhc
Q 021270 229 ARPFSMLGLGDIVIPGIFVALALRFDVS 256 (315)
Q Consensus 229 ~~~~s~LGlGDIviPGlfia~~lRfD~~ 256 (315)
..+|+++|+||.--+. |.....++|..
T Consensus 127 ~l~faV~GlGds~y~~-Fc~~ak~ld~~ 153 (202)
T d1tlla2 127 NVRFSVFGLGSRAYPH-FCAFGHAVDTL 153 (202)
T ss_dssp TCEEEEEEEECTTSSS-TTHHHHHHHHH
T ss_pred CceeEEEccCcccHHH-HhhhHHHHHHH
Confidence 4579999999988776 77777777764
No 8
>d1nixa_ g.3.6.2 (A:) Hainantoxin-I {Spider (Selenocosmia hainana) [TaxId: 209901]}
Probab=3.15 E-value=1.8e+02 Score=16.64 Aligned_cols=9 Identities=44% Similarity=1.154 Sum_probs=7.9
Q ss_pred cCCCeechh
Q 021270 236 GLGDIVIPG 244 (315)
Q Consensus 236 GlGDIviPG 244 (315)
|+||--.||
T Consensus 4 gfg~sc~pg 12 (33)
T d1nixa_ 4 GFGKSCVPG 12 (33)
T ss_dssp CSSCBCCTT
T ss_pred ccccccCCC
Confidence 889998888
No 9
>d2b3na1 d.38.1.4 (A:6-159) Hypothetical protein AF1124 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=3.06 E-value=2e+02 Score=21.19 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=11.7
Q ss_pred ccCCCeechhHHHH
Q 021270 235 LGLGDIVIPGIFVA 248 (315)
Q Consensus 235 LGlGDIviPGlfia 248 (315)
-|+|+.+.||+++.
T Consensus 71 ~g~~~~IahG~l~~ 84 (154)
T d2b3na1 71 TRFGGRVVHGMLTT 84 (154)
T ss_dssp STTSSCCCCHHHHH
T ss_pred cCccceehhHHHHH
Confidence 38999999998764
No 10
>d1hyka_ g.3.5.1 (A:) Agouti-related protein {Synthetic, based on Homo sapiens sequence}
Probab=2.98 E-value=2e+02 Score=17.63 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=20.8
Q ss_pred CceeehheecccccccccccccCcCCCC
Q 021270 288 AQVTIACFFSFVFPLNVHVPRNYSPICY 315 (315)
Q Consensus 288 ~QPALLYLVP~~l~~~v~~~r~~~~~~~ 315 (315)
-|.-|=+=+|+.=|---.--|-|++|||
T Consensus 5 ~eSCLG~~~PCCdpC~TCYCRFFnafCY 32 (46)
T d1hyka_ 5 HESCLGQQVPCCDPCATCYCRFFNAFCY 32 (46)
T ss_dssp SCBCSSSCSCBSSTTCEEEESSSSSCEE
T ss_pred hhHhhCCCCCCcCchhhHHHHHhhhhhh
Confidence 3455556688887766677799999997
Done!