Query 021272
Match_columns 315
No_of_seqs 261 out of 1958
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 15:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 8.5E-46 2.9E-50 368.2 27.6 269 6-280 1-604 (605)
2 3d2f_A Heat shock protein homo 100.0 3.2E-45 1.1E-49 367.3 29.4 277 8-285 3-631 (675)
3 2kho_A Heat shock protein 70; 100.0 3.4E-43 1.2E-47 349.4 25.1 165 110-280 440-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 7.8E-37 2.7E-41 301.0 8.0 112 110-221 442-553 (554)
5 4e81_A Chaperone protein DNAK; 100.0 1.2E-30 4.2E-35 226.7 20.1 173 102-280 43-216 (219)
6 1u00_A HSC66, chaperone protei 100.0 7.5E-29 2.6E-33 217.1 21.4 172 104-282 44-215 (227)
7 2v7y_A Chaperone protein DNAK; 99.9 7.9E-28 2.7E-32 234.7 11.2 101 110-211 409-509 (509)
8 3n8e_A Stress-70 protein, mito 99.9 5.7E-23 2E-27 173.0 12.2 119 102-221 62-181 (182)
9 3h0x_A 78 kDa glucose-regulate 99.8 1.5E-20 5E-25 154.2 10.6 107 104-211 46-152 (152)
10 3dob_A Heat shock 70 kDa prote 99.8 8.8E-21 3E-25 155.4 7.8 110 102-211 42-152 (152)
11 3dqg_A Heat shock 70 kDa prote 99.8 1.5E-20 5.2E-25 153.8 4.8 109 102-211 42-151 (151)
12 3i33_A Heat shock-related 70 k 99.8 2.2E-19 7.4E-24 169.9 7.0 109 5-114 21-129 (404)
13 2op6_A Heat shock 70 kDa prote 99.8 1E-18 3.6E-23 143.5 8.8 110 102-211 42-152 (152)
14 3qfu_A 78 kDa glucose-regulate 99.8 3.3E-19 1.1E-23 167.9 6.4 107 7-114 18-124 (394)
15 3lof_A Heat shock 70 kDa prote 99.8 4.5E-18 1.5E-22 132.6 11.5 111 199-315 3-113 (113)
16 1dkg_D Molecular chaperone DNA 99.7 1.6E-18 5.6E-23 162.7 7.8 103 7-109 2-105 (383)
17 1ud0_A HSC70, 70 kDa heat-shoc 99.7 4E-17 1.4E-21 127.3 8.0 111 203-315 2-113 (113)
18 2p32_A Heat shock 70 kDa prote 99.6 4.4E-16 1.5E-20 122.5 7.9 107 201-315 14-120 (120)
19 4gni_A Putative heat shock pro 99.6 3.2E-16 1.1E-20 148.4 7.8 101 6-109 12-112 (409)
20 1q5l_A Chaperone protein DNAK; 99.3 8.8E-12 3E-16 99.8 9.1 72 103-175 62-133 (135)
21 1jce_A ROD shape-determining p 98.2 6E-07 2.1E-11 82.4 3.4 55 7-70 3-60 (344)
22 2ych_A Competence protein PILM 95.6 0.00074 2.5E-08 62.4 -3.0 37 7-45 13-49 (377)
23 1k8k_A ARP3, actin-like protei 95.5 0.006 2E-07 57.2 2.8 48 6-61 4-69 (418)
24 2fxu_A Alpha-actin-1, actin, a 94.6 0.011 3.7E-07 54.6 1.7 56 6-61 4-61 (375)
25 4ehu_A Activator of 2-hydroxyi 94.5 0.023 7.9E-07 49.9 3.6 21 8-28 2-22 (276)
26 2zgy_A Plasmid segregation pro 90.9 0.17 5.7E-06 45.4 3.9 24 9-32 2-26 (320)
27 3ifr_A Carbohydrate kinase, FG 90.4 0.16 5.6E-06 48.7 3.6 28 1-28 1-29 (508)
28 1k8k_B ARP2, actin-like protei 87.6 0.11 3.6E-06 48.3 0.0 55 7-61 6-64 (394)
29 3i8b_A Xylulose kinase; strain 85.6 0.52 1.8E-05 45.3 3.7 23 6-28 4-28 (515)
30 3jvp_A Ribulokinase; PSI-II, N 84.5 0.55 1.9E-05 45.7 3.3 24 6-29 4-29 (572)
31 3l0q_A Xylulose kinase; xlylul 84.3 0.58 2E-05 45.3 3.4 23 6-28 4-27 (554)
32 3qb0_A Actin-related protein 4 84.1 0.54 1.9E-05 45.0 3.0 44 7-58 23-70 (498)
33 3h6e_A Carbohydrate kinase, FG 84.0 0.48 1.6E-05 45.2 2.6 21 5-25 4-24 (482)
34 3ll3_A Gluconate kinase; xylul 83.0 0.64 2.2E-05 44.5 3.1 21 6-26 3-23 (504)
35 2fsj_A Hypothetical protein TA 82.4 0.66 2.3E-05 42.1 2.8 16 8-23 22-37 (346)
36 1zc6_A Probable N-acetylglucos 82.3 0.8 2.7E-05 40.5 3.2 21 8-28 12-33 (305)
37 4bc3_A Xylulose kinase; transf 81.9 0.86 2.9E-05 44.0 3.5 21 6-26 9-29 (538)
38 3h3n_X Glycerol kinase; ATP-bi 81.6 0.97 3.3E-05 43.2 3.7 23 6-28 4-27 (506)
39 3hz6_A Xylulokinase; xylulose, 81.0 0.95 3.2E-05 43.4 3.4 23 6-28 4-27 (511)
40 2uyt_A Rhamnulokinase; rhamnos 79.9 0.84 2.9E-05 43.4 2.6 20 6-25 3-22 (489)
41 4e1j_A Glycerol kinase; struct 79.8 1.1 3.7E-05 43.1 3.4 22 7-28 26-48 (520)
42 1hux_A Activator of (R)-2-hydr 79.2 1.4 4.7E-05 38.4 3.6 21 8-28 4-25 (270)
43 3g25_A Glycerol kinase; IDP007 79.1 1.2 4.1E-05 42.5 3.4 23 6-28 5-28 (501)
44 2dpn_A Glycerol kinase; thermu 78.8 1.1 3.7E-05 42.7 3.0 19 7-25 2-20 (495)
45 3ezw_A Glycerol kinase; glycer 78.3 1.1 3.8E-05 43.1 2.9 19 7-25 4-22 (526)
46 2p3r_A Glycerol kinase; glycer 78.2 1.2 4.2E-05 42.6 3.2 23 6-28 2-25 (510)
47 2w40_A Glycerol kinase, putati 77.3 1.2 4E-05 42.6 2.7 19 7-25 4-22 (503)
48 2ews_A Pantothenate kinase; PA 75.1 1.8 6.2E-05 38.2 3.2 25 5-29 18-42 (287)
49 2zf5_O Glycerol kinase; hypert 74.7 1.6 5.5E-05 41.5 3.0 20 7-26 3-22 (497)
50 3djc_A Type III pantothenate k 73.8 2.5 8.6E-05 36.9 3.7 22 8-29 3-24 (266)
51 2itm_A Xylulose kinase, xylulo 70.7 2.5 8.5E-05 40.0 3.2 20 9-28 2-22 (484)
52 2d4w_A Glycerol kinase; alpha 69.5 2.5 8.6E-05 40.3 3.0 21 8-28 3-24 (504)
53 1nu0_A Hypothetical protein YQ 69.2 3.7 0.00013 32.0 3.4 21 7-27 3-23 (138)
54 1vhx_A Putative holliday junct 68.5 3 0.0001 33.0 2.8 19 8-26 4-22 (150)
55 1iv0_A Hypothetical protein; r 67.0 3.9 0.00013 29.9 2.9 19 8-26 2-20 (98)
56 3h1q_A Ethanolamine utilizatio 66.7 5 0.00017 34.3 4.1 19 7-25 28-46 (272)
57 1zbs_A Hypothetical protein PG 64.5 5.1 0.00017 35.0 3.7 20 9-28 2-21 (291)
58 1hjr_A Holliday junction resol 63.0 8.5 0.00029 30.7 4.4 25 8-32 2-28 (158)
59 4fla_A Regulation of nuclear P 62.6 47 0.0016 26.1 8.7 47 233-279 96-145 (152)
60 2ch5_A NAGK protein; transfera 62.4 4.9 0.00017 35.8 3.3 21 8-28 7-28 (347)
61 3vgl_A Glucokinase; ROK family 61.5 4.1 0.00014 36.2 2.6 20 7-26 2-21 (321)
62 2e2o_A Hexokinase; acetate and 59.8 6.1 0.00021 34.4 3.4 21 8-28 3-24 (299)
63 1sz2_A Glucokinase, glucose ki 58.0 6 0.00021 35.2 3.1 25 5-29 12-38 (332)
64 1zxo_A Conserved hypothetical 56.9 4.7 0.00016 35.2 2.1 20 9-28 2-21 (291)
65 3dwl_A Actin-related protein 3 54.4 3.6 0.00012 38.4 0.9 25 6-30 4-28 (427)
66 2o37_A Protein SIS1; HSP40, J- 52.3 10 0.00034 27.0 2.9 23 259-281 47-69 (92)
67 2qm1_A Glucokinase; alpha-beta 52.2 7.3 0.00025 34.3 2.6 20 7-26 6-25 (326)
68 3lay_A Zinc resistance-associa 52.1 91 0.0031 25.1 9.6 18 177-194 67-84 (175)
69 2h3g_X Biosynthetic protein; p 51.4 11 0.00039 32.7 3.6 21 9-29 2-22 (268)
70 1bdg_A Hexokinase; phosphotran 51.2 8.8 0.0003 36.0 3.1 20 6-25 67-86 (451)
71 3vov_A Glucokinase, hexokinase 51.0 9 0.00031 33.6 3.0 20 8-27 2-21 (302)
72 1saz_A Probable butyrate kinas 51.0 13 0.00045 33.8 4.2 21 7-27 2-22 (381)
73 4ep4_A Crossover junction endo 50.5 15 0.0005 29.5 3.9 18 8-25 2-19 (166)
74 2yhx_A Hexokinase B; transfera 50.4 9.1 0.00031 36.0 3.0 24 6-29 60-84 (457)
75 3nuw_A 2-OXO-3-deoxygalactonat 49.1 21 0.00072 31.5 5.0 36 6-41 5-41 (295)
76 3r8e_A Hypothetical sugar kina 48.1 11 0.00037 33.4 3.0 22 5-26 17-38 (321)
77 3bex_A Type III pantothenate k 47.7 11 0.00036 32.4 2.8 21 8-28 4-24 (249)
78 2a01_A Apolipoprotein A-I; fou 47.6 9.2 0.00032 32.7 2.4 19 233-251 169-187 (243)
79 1h7c_A Tubulin-specific chaper 45.7 87 0.003 23.0 7.5 42 229-270 62-104 (108)
80 3mcp_A Glucokinase; structural 44.9 20 0.0007 32.5 4.4 24 5-28 7-30 (366)
81 2yhw_A Bifunctional UDP-N-acet 44.8 11 0.00039 33.4 2.7 22 7-28 30-52 (343)
82 3js6_A Uncharacterized PARM pr 44.4 28 0.00096 31.3 5.3 25 7-33 4-28 (355)
83 4htl_A Beta-glucoside kinase; 44.4 13 0.00044 32.4 2.9 22 7-28 4-26 (297)
84 4a2a_A Cell division protein F 43.6 13 0.00046 34.4 3.0 20 6-25 7-26 (419)
85 4apw_A ALP12; actin-like prote 43.5 5.2 0.00018 35.8 0.1 53 7-59 7-73 (329)
86 2zqm_A Prefoldin beta subunit 43.0 94 0.0032 22.6 9.8 53 228-284 61-113 (117)
87 1nbw_A Glycerol dehydratase re 42.8 13 0.00046 35.8 2.8 19 7-25 2-20 (607)
88 3o8m_A Hexokinase; rnaseh-like 42.4 12 0.00042 35.5 2.5 19 7-25 80-98 (485)
89 3htv_A D-allose kinase, alloki 42.4 11 0.00039 33.1 2.3 23 6-28 6-29 (310)
90 1cza_N Hexokinase type I; stru 41.3 8.4 0.00029 39.6 1.3 20 6-25 525-544 (917)
91 1woq_A Inorganic polyphosphate 41.2 17 0.0006 31.0 3.2 19 7-25 12-30 (267)
92 2q2r_A Glucokinase 1, putative 40.0 16 0.00055 32.9 2.9 21 6-26 28-48 (373)
93 3epq_A Putative fructokinase; 40.0 17 0.00057 31.9 2.9 22 7-28 3-25 (302)
94 3ls0_A SLL1638 protein, PSBQ; 39.8 78 0.0027 24.3 6.3 93 177-271 16-126 (133)
95 2aa4_A Mannac kinase, putative 38.5 20 0.0007 30.7 3.3 21 8-28 2-23 (289)
96 1z6r_A MLC protein; transcript 38.2 18 0.00062 33.0 3.0 21 6-26 84-104 (406)
97 4db3_A Glcnac kinase, N-acetyl 37.5 18 0.00062 32.0 2.8 21 8-28 25-46 (327)
98 2f9w_A Pantothenate kinase; CO 37.3 26 0.00089 30.4 3.7 21 8-28 24-45 (271)
99 2hoe_A N-acetylglucosamine kin 36.6 19 0.00065 32.6 2.8 20 7-26 87-106 (380)
100 3t69_A Putative 2-dehydro-3-de 36.3 22 0.00075 31.9 3.1 22 5-26 5-26 (330)
101 3nmd_A CGMP dependent protein 35.1 94 0.0032 21.1 5.3 39 190-230 32-70 (72)
102 2ap1_A Putative regulator prot 34.4 23 0.0008 31.1 3.0 23 6-28 23-46 (327)
103 1cza_N Hexokinase type I; stru 34.1 22 0.00076 36.5 3.1 20 6-25 77-96 (917)
104 3zsu_A TLL2057 protein, cyanoq 33.8 1.6E+02 0.0053 22.5 7.1 93 177-271 14-123 (130)
105 3lay_A Zinc resistance-associa 33.4 1.9E+02 0.0063 23.2 10.9 36 235-270 91-128 (175)
106 2wl8_A Peroxisomal biogenesis 33.4 43 0.0015 25.5 3.9 13 229-241 52-64 (126)
107 3r2p_A Apolipoprotein A-I; amp 33.4 88 0.003 25.1 6.1 20 259-278 152-171 (185)
108 2gup_A ROK family protein; sug 33.3 22 0.00074 30.7 2.5 21 8-28 5-26 (292)
109 3hm8_A Hexokinase-3; glucose, 33.1 26 0.00088 32.8 3.1 20 6-25 58-77 (445)
110 3mxz_A Tubulin-specific chaper 32.5 1.5E+02 0.0053 22.0 9.7 41 230-270 64-107 (116)
111 3cet_A Conserved archaeal prot 32.2 33 0.0011 30.8 3.5 20 9-28 2-22 (334)
112 1z05_A Transcriptional regulat 31.7 22 0.00076 32.7 2.4 20 7-26 108-127 (429)
113 1nfn_A Apolipoprotein E3; lipi 30.2 1E+02 0.0035 25.0 6.0 20 203-222 108-127 (191)
114 3f9m_A Glucokinase; hexokinase 29.6 32 0.0011 32.5 3.1 20 6-25 76-95 (470)
115 3s84_A Apolipoprotein A-IV; fo 29.1 2.3E+02 0.008 24.3 8.4 10 240-249 176-185 (273)
116 3lm2_A Putative kinase; struct 28.2 27 0.00091 29.4 2.1 16 6-21 5-20 (226)
117 3r2p_A Apolipoprotein A-I; amp 28.0 2.3E+02 0.0078 22.6 9.9 47 204-250 114-165 (185)
118 2ivn_A O-sialoglycoprotein end 26.4 43 0.0015 29.7 3.3 21 8-28 2-22 (330)
119 2ra1_A Surface layer protein; 25.9 85 0.0029 28.6 5.0 65 206-270 160-224 (412)
120 2odv_A Plectin 1, HD1; plakin 25.2 3E+02 0.01 23.0 10.6 44 179-224 42-85 (235)
121 2a01_A Apolipoprotein A-I; fou 25.1 1.7E+02 0.006 24.5 6.8 48 204-251 113-165 (243)
122 2lem_A Apolipoprotein A-I; lip 24.3 2E+02 0.007 23.6 7.0 48 204-251 112-164 (216)
123 2hh3_A KH-type splicing regula 23.2 44 0.0015 24.4 2.2 7 291-297 90-96 (106)
124 3fx7_A Putative uncharacterize 22.1 2.2E+02 0.0075 20.3 9.2 73 178-267 6-78 (94)
125 2d0o_A DIOL dehydratase-reacti 22.0 56 0.0019 31.6 3.2 27 7-33 2-31 (610)
126 2lhr_A Iron-regulated surface 21.7 1E+02 0.0035 20.6 3.5 37 209-251 24-60 (78)
127 1kcf_A Hypothetical 30.2 KD pr 21.1 63 0.0021 27.8 3.1 18 8-25 41-58 (258)
128 4dkw_A Large terminase protein 20.7 57 0.0019 27.0 2.7 15 7-21 27-41 (211)
129 3itf_A Periplasmic adaptor pro 20.4 2.9E+02 0.01 21.3 6.6 18 177-194 45-62 (145)
130 2nr5_A Hypothetical protein SO 20.3 1.4E+02 0.0048 18.8 3.8 20 232-251 43-62 (67)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=8.5e-46 Score=368.20 Aligned_cols=269 Identities=43% Similarity=0.688 Sum_probs=254.0
Q ss_pred CCCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCC-ceeecHHHHHhHHhCCCcchhhhhhhhcCCCCCh
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDS 84 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~ 84 (315)
|+.+|||||||||||||++.+|.+++++|..|++++||+|+|..+ +++||..|+.++..+|.++++++|||||++++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 357999999999999999999999999999999999999999854 8999999999999999999999999999999999
Q ss_pred hhhcccCCCCccccCCCCCCCeEEE-------------------------------------------------------
Q 021272 85 SVQGDIKHWPFKVIPGAGDKPTIVV------------------------------------------------------- 109 (315)
Q Consensus 85 ~v~~~~~~~~~~vv~~~~g~~~i~v------------------------------------------------------- 109 (315)
.++...+++||.++...+|.+.+.+
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~ 160 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999999999988888888876
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 161 AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l 240 (605)
T 4b9q_A 161 AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL 240 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 241 ~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v 320 (605)
T 4b9q_A 241 VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPL 320 (605)
T ss_dssp HHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 321 ~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLG 400 (605)
T ss_dssp HHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCEE
T ss_pred HHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEEE
Confidence
Q ss_pred ---------------------------------------EecCcccccccccccccccccCCCCCCCCcceEEEEEEEec
Q 021272 110 ---------------------------------------VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDA 150 (315)
Q Consensus 110 ---------------------------------------vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~ 150 (315)
+|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECT
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcC
Confidence 89999999999999999999999999999999999999999
Q ss_pred CCcEEEEeeecccccccceEEecCCCCCCHHHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccC
Q 021272 151 NGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKL 230 (315)
Q Consensus 151 nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~ 230 (315)
||+|+|++.++.+|+...++|.+.. +||++||+++++++.++..+|+..+++.+++|+||+++|.+|+.|. ++...+
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~~-~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~--~~~~~~ 557 (605)
T 4b9q_A 481 DGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVE--EAGDKL 557 (605)
T ss_dssp TSCEEEEEEETTTCCEECCEEESCC-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGS
T ss_pred CcEEEEEEEecCCCcEEEEEecCCC-CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhC
Confidence 9999999999999999999998865 5999999999999999999999999999999999999999999996 477899
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHc
Q 021272 231 SAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 280 (315)
Q Consensus 231 ~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e 280 (315)
++++|++|.+.++++++||+.+ +.++|+.++++|++.+.||..++++
T Consensus 558 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 558 PADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999987 5899999999999999999998764
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=3.2e-45 Score=367.25 Aligned_cols=277 Identities=23% Similarity=0.395 Sum_probs=256.2
Q ss_pred CEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCCceeecHHHHHhHHhCCCcchhhhhhhhcCCCCChhhh
Q 021272 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDSSVQ 87 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~~v~ 87 (315)
.+|||||||||||||++.+|.+++|+|..|+|++||+|+|..++++||..|++++..+|.++++++|||||++++++.++
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 38999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred cccCCCCccccCCCCCCCeEEE----------------------------------------------------------
Q 021272 88 GDIKHWPFKVIPGAGDKPTIVV---------------------------------------------------------- 109 (315)
Q Consensus 88 ~~~~~~~~~vv~~~~g~~~i~v---------------------------------------------------------- 109 (315)
.+.+++||.++...+|.+.+.+
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999877777776533
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021272 110 -------------------------------------------------------------------------------- 109 (315)
Q Consensus 110 -------------------------------------------------------------------------------- 109 (315)
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~sl 402 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSV 402 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSCE
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecce
Confidence
Q ss_pred -----------------------------------------EecCcccccc-cccccccccccCCCCCCCCcc-eEEEEE
Q 021272 110 -----------------------------------------VYEGERARTR-DNNLLGKFELSGIPPAPRGVP-QITVCF 146 (315)
Q Consensus 110 -----------------------------------------vyqGe~~~~~-~n~~Lg~~~l~~i~~~~~g~~-~i~v~f 146 (315)
+|+|++.++. +|..||+|.|.+||++|+|.+ +|+|+|
T Consensus 403 gi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f 482 (675)
T 3d2f_A 403 SYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKL 482 (675)
T ss_dssp EEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEE
T ss_pred EeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEE
Confidence 4789988887 999999999999999999974 999999
Q ss_pred EEecCCcEEEEee----------ecccccccceEEecCCCCCCHHHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHH
Q 021272 147 DIDANGILNVSAE----------DKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYN 216 (315)
Q Consensus 147 ~~d~nGil~V~a~----------~~~t~~~~~l~i~~~~~~Ls~~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~ 216 (315)
++|.||||+|++. ++.+++...++|.+...+||++||+++++++.++..+|+..+++.+++|+||+|+|.
T Consensus 483 ~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~ 562 (675)
T 3d2f_A 483 RCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYT 562 (675)
T ss_dssp EECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999996 678899999999887667999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccCCHHHHHHHHHHHHHHHHHHhc-CccccHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 021272 217 MRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDS-NQLAEADEFEDKMKELESICNPIIAKMYQGGVAP 285 (315)
Q Consensus 217 ~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~-~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~~~~ 285 (315)
+|+.|.+ .+..+++++++++|.+.|+++++|||+ +.+++.++|++++++|++++.||..|++|+..++
T Consensus 563 ~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp 631 (675)
T 3d2f_A 563 LRGKLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEK 631 (675)
T ss_dssp HHHHHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCh
Confidence 9999974 588899999999999999999999987 4578899999999999999999999999886443
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.4e-43 Score=349.44 Aligned_cols=165 Identities=41% Similarity=0.653 Sum_probs=156.8
Q ss_pred EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCHHHHHHHHHH
Q 021272 110 VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQE 189 (315)
Q Consensus 110 vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei~~~~~~ 189 (315)
+|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.||+|+|++.++.+|+...++|.+. .+|+++||++++++
T Consensus 440 v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~ 518 (605)
T 2kho_A 440 VLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRD 518 (605)
T ss_dssp EEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHH
T ss_pred EEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999887 67999999999999
Q ss_pred HHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHH
Q 021272 190 AEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELES 269 (315)
Q Consensus 190 ~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~ 269 (315)
++++..+|+..+++.+++|+||+++|++|+.|. ++...++++++++|.+.++++++||+.+ +.++|++++++|++
T Consensus 519 ~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~--~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~ 593 (605)
T 2kho_A 519 AEANAEADRKFDELVQTRNQGDHLLHSTRKQVE--EAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQ 593 (605)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHT
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHH
Confidence 999999999999999999999999999999996 3788999999999999999999999964 78999999999999
Q ss_pred HHHHHHHHHHc
Q 021272 270 ICNPIIAKMYQ 280 (315)
Q Consensus 270 ~~~pi~~r~~e 280 (315)
.+.||..|++.
T Consensus 594 ~~~~~~~~~~~ 604 (605)
T 2kho_A 594 VSQKLMEIAQQ 604 (605)
T ss_dssp TCHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999999863
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=7.8e-37 Score=300.99 Aligned_cols=112 Identities=79% Similarity=1.187 Sum_probs=107.5
Q ss_pred EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCHHHHHHHHHH
Q 021272 110 VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQE 189 (315)
Q Consensus 110 vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei~~~~~~ 189 (315)
+|||++..+.+|..||+|.|.++|+.|+|.++|+|+|++|.||+|+|++.++.+|+...++|.+...+||++||++++++
T Consensus 442 v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~ 521 (554)
T 1yuw_A 442 VYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQE 521 (554)
T ss_dssp EEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHH
T ss_pred EEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999987778999999999999
Q ss_pred HHHhhhhchHHHHHHHHHHhHHHHHHHHHhhc
Q 021272 190 AEKYKSEDEEHKKKVEAKNALENYAYNMRNTI 221 (315)
Q Consensus 190 ~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l 221 (315)
+.+++.+|+..+++.+++|+||+++|.+|+.|
T Consensus 522 ~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 522 AEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp HHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred HHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999988766
No 5
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.97 E-value=1.2e-30 Score=226.66 Aligned_cols=173 Identities=39% Similarity=0.645 Sum_probs=160.7
Q ss_pred CCCCeEEE-EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCH
Q 021272 102 GDKPTIVV-VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK 180 (315)
Q Consensus 102 ~g~~~i~v-vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~ 180 (315)
+++..+.| +|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.||||+|++.++.+|+...++|.+.. +||+
T Consensus 43 dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~-~Ls~ 121 (219)
T 4e81_A 43 DNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS-GLNE 121 (219)
T ss_dssp TTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTC-SCCH
T ss_pred CCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCCceEEEEEEeCCCCCEeeeeeccccCccceEeeeccc-cccH
Confidence 44544544 899999999999999999999999999999999999999999999999999999999999998864 5999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHH
Q 021272 181 EEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEF 260 (315)
Q Consensus 181 ~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~ 260 (315)
+||++++++++++..+|+..+++.+++|.||+++|.+|+.|. .+.+.++++++++|.+.+.++++||+++ +.++|
T Consensus 122 eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~--~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i 196 (219)
T 4e81_A 122 DEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVE--EAGDKLPADDKTAIESALTALETALKGE---DKAAI 196 (219)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHH
T ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHH
Confidence 999999999999999999999999999999999999999997 3778999999999999999999999997 68999
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 021272 261 EDKMKELESICNPIIAKMYQ 280 (315)
Q Consensus 261 ~~kl~~L~~~~~pi~~r~~e 280 (315)
..++++|++.+.||..|++.
T Consensus 197 ~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 197 EAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999875
No 6
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.97 E-value=7.5e-29 Score=217.14 Aligned_cols=172 Identities=26% Similarity=0.435 Sum_probs=159.8
Q ss_pred CCeEEEEecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCHHHH
Q 021272 104 KPTIVVVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEI 183 (315)
Q Consensus 104 ~~~i~vvyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei 183 (315)
.+.|. +|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.||||+|++.+..+|+...++|.... +||.++|
T Consensus 44 ~v~i~-v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~-~Ls~eei 121 (227)
T 1u00_A 44 AMSIH-VMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSY-GLTDSEI 121 (227)
T ss_dssp CEEEE-EEECSSSBGGGSEEEEEEEECCCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCS-CCCHHHH
T ss_pred EEEEE-EEecCCccCCCCCEEEEEEEeCCCCCCCCceEEEEEEEECCCCcEEEEeecccccccceEEEEecc-CCCHHHH
Confidence 34455 999999999999999999999999999999999999999999999999999999999999998774 5999999
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHH
Q 021272 184 EKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDK 263 (315)
Q Consensus 184 ~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~k 263 (315)
+++++++.++..+|+..+++.+++|.||+|||.+|+.|. .+...++++++++|.+.|+++++||+.+ +.++|+++
T Consensus 122 ~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~--~~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~ 196 (227)
T 1u00_A 122 ASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA--ADAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQA 196 (227)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHH
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHH
Confidence 999999999999999999999999999999999999996 3678899999999999999999999965 58999999
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 021272 264 MKELESICNPIIAKMYQGG 282 (315)
Q Consensus 264 l~~L~~~~~pi~~r~~e~~ 282 (315)
+++|++++.||..|++...
T Consensus 197 ~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 197 IKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887543
No 7
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.95 E-value=7.9e-28 Score=234.71 Aligned_cols=101 Identities=50% Similarity=0.824 Sum_probs=92.3
Q ss_pred EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCHHHHHHHHHH
Q 021272 110 VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQE 189 (315)
Q Consensus 110 vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei~~~~~~ 189 (315)
+|+|++..+.+|..||+|.|.++|+.|+|.++|+|+|++|.||+|+|++.+..+|+...++|... .+||++||++++++
T Consensus 409 v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~ 487 (509)
T 2v7y_A 409 VLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKE 487 (509)
T ss_dssp EEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHH
T ss_pred EEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999887 56999999999999
Q ss_pred HHHhhhhchHHHHHHHHHHhHH
Q 021272 190 AEKYKSEDEEHKKKVEAKNALE 211 (315)
Q Consensus 190 ~~~~~~~D~~~~~~~~~kn~LE 211 (315)
+.++..+|+..+++.+++|+||
T Consensus 488 ~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 488 AEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HHHSCGGGGGGGGCCCC-----
T ss_pred HHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999886
No 8
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.89 E-value=5.7e-23 Score=172.96 Aligned_cols=119 Identities=51% Similarity=0.820 Sum_probs=111.0
Q ss_pred CCCCeEEE-EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCH
Q 021272 102 GDKPTIVV-VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK 180 (315)
Q Consensus 102 ~g~~~i~v-vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~ 180 (315)
+++..+.| +|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.||||+|++.++.+|+...++|.+. .+|++
T Consensus 62 DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~ 140 (182)
T 3n8e_A 62 DGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSK 140 (182)
T ss_dssp TTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCH
T ss_pred CCccEEEEEEEEcCccccccCceEEEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCH
Confidence 44444443 89999999999999999999999999999999999999999999999999999999999999987 78999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhc
Q 021272 181 EEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTI 221 (315)
Q Consensus 181 ~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l 221 (315)
+||+++++++++++.+|++.+++.+++|.||+|+|.+|..|
T Consensus 141 eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 141 DDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998766
No 9
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.83 E-value=1.5e-20 Score=154.20 Aligned_cols=107 Identities=69% Similarity=1.038 Sum_probs=101.1
Q ss_pred CCeEEEEecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCHHHH
Q 021272 104 KPTIVVVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEI 183 (315)
Q Consensus 104 ~~~i~vvyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~~ei 183 (315)
.+.|. +|||++..+.+|.+||+|.|.++|++|+|.++|+|+|++|.||||+|++.++.+|+...++|.+..++|+++||
T Consensus 46 ~v~i~-VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei 124 (152)
T 3h0x_A 46 TVMIK-VYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEI 124 (152)
T ss_dssp CEEEE-EEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHH
T ss_pred eeeee-EEEcCccccccCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHH
Confidence 34455 89999999999999999999999999999999999999999999999999999999999999988778999999
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHHHhHH
Q 021272 184 EKMVQEAEKYKSEDEEHKKKVEAKNALE 211 (315)
Q Consensus 184 ~~~~~~~~~~~~~D~~~~~~~~~kn~LE 211 (315)
+++++++++|+.+|+..+++.+++|.||
T Consensus 125 ~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 125 DRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999875
No 10
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.82 E-value=8.8e-21 Score=155.35 Aligned_cols=110 Identities=64% Similarity=1.064 Sum_probs=98.3
Q ss_pred CCCCeEEE-EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCH
Q 021272 102 GDKPTIVV-VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK 180 (315)
Q Consensus 102 ~g~~~i~v-vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~ 180 (315)
+++..+.| +|||++..+.+|.+||+|.|.++|++|+|.++|+|+|++|.||||+|++.++.+|+...++|.+..++||+
T Consensus 42 dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~ 121 (152)
T 3dob_A 42 DNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQ 121 (152)
T ss_dssp TTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CH
T ss_pred CCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCH
Confidence 44444444 89999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhHH
Q 021272 181 EEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 211 (315)
Q Consensus 181 ~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LE 211 (315)
+||+++++++++++.+|++.+++.+++|.||
T Consensus 122 ~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 122 SDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999998888775
No 11
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.80 E-value=1.5e-20 Score=153.77 Aligned_cols=109 Identities=52% Similarity=0.861 Sum_probs=99.6
Q ss_pred CCCCeEEE-EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCH
Q 021272 102 GDKPTIVV-VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK 180 (315)
Q Consensus 102 ~g~~~i~v-vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~ 180 (315)
+++..+.+ +|||++..+.+|.+||+|.|.++|++|+|.++|+|+|++|.||||+|++.++.+|+...++|.+. .+|++
T Consensus 42 dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~ 120 (151)
T 3dqg_A 42 DGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSK 120 (151)
T ss_dssp TTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCH
T ss_pred CCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCcEEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCH
Confidence 44444444 89999999999999999999999999999999999999999999999999999999999999987 78999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhHH
Q 021272 181 EEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 211 (315)
Q Consensus 181 ~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LE 211 (315)
+||+++++++++++.+|++.+++.+++|.||
T Consensus 121 ~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 121 DQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999998888887777764
No 12
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.77 E-value=2.2e-19 Score=169.88 Aligned_cols=109 Identities=78% Similarity=1.255 Sum_probs=100.3
Q ss_pred CCCCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCCceeecHHHHHhHHhCCCcchhhhhhhhcCCCCCh
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDS 84 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~ 84 (315)
+...+||||||||||+||++.+|.++++++..|++.+||+|+|..+++++|..|+.++.++|.++++++|||||++++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 35679999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred hhhcccCCCCccccCCCCCCCeEEEEecCc
Q 021272 85 SVQGDIKHWPFKVIPGAGDKPTIVVVYEGE 114 (315)
Q Consensus 85 ~v~~~~~~~~~~vv~~~~g~~~i~vvyqGe 114 (315)
.++...+.+||.++. .+|.+.+.+.+.|+
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~ 129 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGE 129 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTE
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCC
Confidence 999999999999985 67888888777664
No 13
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=1e-18 Score=143.46 Aligned_cols=110 Identities=57% Similarity=0.981 Sum_probs=100.6
Q ss_pred CCCCeEEE-EecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCCCCCCH
Q 021272 102 GDKPTIVV-VYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK 180 (315)
Q Consensus 102 ~g~~~i~v-vyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~~~Ls~ 180 (315)
+++..+.+ +|||++..+.+|..||.|.|.++|++|+|.++|+|+|++|.||+|+|++.+..+|+...++|....++|++
T Consensus 42 d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~ 121 (152)
T 2op6_A 42 DSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSP 121 (152)
T ss_dssp TTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCH
T ss_pred CCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCH
Confidence 33444444 99999999999999999999999999999999999999999999999999999999999999887677999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhHH
Q 021272 181 EEIEKMVQEAEKYKSEDEEHKKKVEAKNALE 211 (315)
Q Consensus 181 ~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LE 211 (315)
+||+++++++.+|+.+|+..+++.++||.||
T Consensus 122 eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 122 EDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred HHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999888875
No 14
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.76 E-value=3.3e-19 Score=167.87 Aligned_cols=107 Identities=66% Similarity=1.040 Sum_probs=100.5
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCCceeecHHHHHhHHhCCCcchhhhhhhhcCCCCChhh
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDSSV 86 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~~v 86 (315)
..+||||||||||+||++.+|.++++++..|++.+||+|+|.++++++|..|+..+..+|.++++++||+||++++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 57899999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred hcccCCCCccccCCCCCCCeEEEEecCc
Q 021272 87 QGDIKHWPFKVIPGAGDKPTIVVVYEGE 114 (315)
Q Consensus 87 ~~~~~~~~~~vv~~~~g~~~i~vvyqGe 114 (315)
+...+.+||.++ +.+|.+.+.+.+.|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 124 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGE 124 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSS
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCC
Confidence 999999999998 678888888776664
No 15
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.76 E-value=4.5e-18 Score=132.64 Aligned_cols=111 Identities=53% Similarity=0.947 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHH
Q 021272 199 EHKKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESICNPIIAKM 278 (315)
Q Consensus 199 ~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~ 278 (315)
+.+++.++||.||+|||.+|..|.++.+...++++++..|...|.++++||+.+++++.++|+.++++|+.++.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999855688999999999999999999999999888899999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 021272 279 YQGGVAPGAGPAPGPGMDESAPPAGGSSAGPKIEEVD 315 (315)
Q Consensus 279 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (315)
+...++++++ |||++. +++++..+|++||||
T Consensus 83 y~~~~~~~~~-----~~~~~~-~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPGPG-----GFGAQG-PKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC----------------------------------
T ss_pred HHhccCCCCC-----CCCCCC-CCCCCCCCCCCCCCC
Confidence 9753322122 233322 233345789999997
No 16
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.74 E-value=1.6e-18 Score=162.72 Aligned_cols=103 Identities=48% Similarity=0.777 Sum_probs=93.4
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecC-CceeecHHHHHhHHhCCCcchhhhhhhhcCCCCChh
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDSS 85 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~-~~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~~ 85 (315)
+.+||||||||||+||++.+|.+++++|..|++.+||+|+|.. +++++|..|+.+..++|.++++++|||||+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 4689999999999999999999999999999999999999965 478999999999999999999999999999999988
Q ss_pred hhcccCCCCccccCCCCCCCeEEE
Q 021272 86 VQGDIKHWPFKVIPGAGDKPTIVV 109 (315)
Q Consensus 86 v~~~~~~~~~~vv~~~~g~~~i~v 109 (315)
++...+.+||.++.+.+|.+.+.+
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~ 105 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV 105 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE
Confidence 888888999998777777777764
No 17
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.69 E-value=4e-17 Score=127.28 Aligned_cols=111 Identities=48% Similarity=0.867 Sum_probs=72.9
Q ss_pred HHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 021272 203 KVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGG 282 (315)
Q Consensus 203 ~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~ 282 (315)
+.++||.||+|||.+|..|.++.+...++++++++|...|.++++||+++++++.++|+.++++|++++.||..|+++..
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45679999999999999997446888999999999999999999999876667899999999999999999999998653
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCCCCCCCcccCC
Q 021272 283 VAPGAGPAPGPGMDE-SAPPAGGSSAGPKIEEVD 315 (315)
Q Consensus 283 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 315 (315)
++. +++.|| |||+ ++.++|++.++|+++|||
T Consensus 82 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 82 GGM-PGGMPG-GFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CCC-CCC---------------------------
T ss_pred cCC-CCCCCC-CCCCcccCCCCCCCCCCCcccCC
Confidence 332 333232 3443 233344556789999997
No 18
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.63 E-value=4.4e-16 Score=122.55 Aligned_cols=107 Identities=44% Similarity=0.733 Sum_probs=73.4
Q ss_pred HHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHc
Q 021272 201 KKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 280 (315)
Q Consensus 201 ~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e 280 (315)
+++.++||.||+|||.+|..|.++.+.+.++++++++|...|.++++||+.+++++.++|+.++++|++++.||..|++.
T Consensus 14 re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y~ 93 (120)
T 2p32_A 14 LVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 93 (120)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999975458889999999999999999999999766788999999999999999999999885
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 021272 281 GGVAPGAGPAPGPGMDESAPPAGGSSAGPKIEEVD 315 (315)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (315)
..++. +++ || + .++|++.++|++||||
T Consensus 94 ~~~~~-~~~-~~-----~-~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 94 SAGGA-PPG-AA-----P-GGAAGGAGGPTIEEVD 120 (120)
T ss_dssp C----------------------------------
T ss_pred hccCC-CCC-CC-----C-CCCCCCCCCCCCCCCC
Confidence 32222 221 22 1 1123445689999997
No 19
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.63 E-value=3.2e-16 Score=148.43 Aligned_cols=101 Identities=30% Similarity=0.491 Sum_probs=87.0
Q ss_pred CCCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCCceeecHHHHHhHHhCCCcchhhhhhhhcCCCCChh
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDSS 85 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~KrliG~~~~~~~ 85 (315)
...+||||||||||+||++.+|.++++++..|++.+||+|+|.++++++|..|+.++.++|.++++.+||+||++++++.
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 35799999999999999999999999999999999999999998899999999999999999999999999999998876
Q ss_pred hhcccCCCCccccCCCCCCCeEEE
Q 021272 86 VQGDIKHWPFKVIPGAGDKPTIVV 109 (315)
Q Consensus 86 v~~~~~~~~~~vv~~~~g~~~i~v 109 (315)
++.. .+++.+. ..+|.+.+.+
T Consensus 92 ~~~~--~~~~~~~-~~~g~~~~~v 112 (409)
T 4gni_A 92 PTHN--HASAHPQ-EAGDNVVFTI 112 (409)
T ss_dssp CGGG--TTSCCCE-EETTEEEEEE
T ss_pred hhhh--cccccee-cCCCcEEEEE
Confidence 6544 3344443 3466777764
No 20
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.29 E-value=8.8e-12 Score=99.78 Aligned_cols=72 Identities=58% Similarity=0.926 Sum_probs=66.3
Q ss_pred CCCeEEEEecCcccccccccccccccccCCCCCCCCcceEEEEEEEecCCcEEEEeeecccccccceEEecCC
Q 021272 103 DKPTIVVVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDK 175 (315)
Q Consensus 103 g~~~i~vvyqGe~~~~~~n~~Lg~~~l~~i~~~~~g~~~i~v~f~~d~nGil~V~a~~~~t~~~~~l~i~~~~ 175 (315)
..+.|. +|||++..+.+|..||+|.|.++|++|+|.++|+|+|++|.||+|+|++.++.+|+...++|.+..
T Consensus 62 ~~v~I~-VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~ 133 (135)
T 1q5l_A 62 SAVTIH-VLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS 133 (135)
T ss_dssp SSCEEE-EEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSC
T ss_pred eEEEEE-EEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCC
Confidence 345556 999999999999999999999999999999999999999999999999999999999999998763
No 21
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.20 E-value=6e-07 Score=82.45 Aligned_cols=55 Identities=35% Similarity=0.449 Sum_probs=42.8
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCC--c-eeecHHHHHhHHhCCCcch
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT--E-RLIGDAAKNQVAMNPLNTV 70 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~--~-~~vG~~A~~~~~~~~~~~~ 70 (315)
+.+||||||||||+|++..++ .++ + +||+|+|..+ . .+||..|++...++|.++.
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~ 60 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-N------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIK 60 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-E------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEE
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-e------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeE
Confidence 569999999999999875443 233 2 7999999765 3 4799999999888887764
No 22
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=95.60 E-value=0.00074 Score=62.38 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=28.2
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEE
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV 45 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v 45 (315)
..++|||+|||+++++++.++.+.+. ..|...+||.+
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~ 49 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGL 49 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTS
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCc
Confidence 46899999999999999887766552 34566677754
No 23
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=95.49 E-value=0.006 Score=57.16 Aligned_cols=48 Identities=29% Similarity=0.459 Sum_probs=33.8
Q ss_pred CCCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCC------------------ceeecHHHHHh
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT------------------ERLIGDAAKNQ 61 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~------------------~~~vG~~A~~~ 61 (315)
...+|+||+||+|+++++..+..|.+ .+||+|+.... ..+||..|...
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~--------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~ 69 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQF--------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK 69 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSE--------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCC--------cCCceEEEECcccccccccccccccccccCeEEChHHHhc
Confidence 44689999999999999876555532 24677766432 36789988754
No 24
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=94.59 E-value=0.011 Score=54.64 Aligned_cols=56 Identities=20% Similarity=0.286 Sum_probs=33.5
Q ss_pred CCCEEEEeccccceEEEEEeCCeEE-EEEcCCCCcccce-EEEecCCceeecHHHHHh
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRVE-IIANDQGNRTTPS-YVAFTDTERLIGDAAKNQ 61 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~~-vi~~~~~~~~~PS-~v~~~~~~~~vG~~A~~~ 61 (315)
....|+||+||+|+++++...+.|. ++++--+....++ .+.+.....+||..|...
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~ 61 (375)
T 2fxu_A 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 (375)
T ss_dssp CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHH
T ss_pred CCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhc
Confidence 4468999999999999988666554 4443333322222 122222457899999875
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=94.51 E-value=0.023 Score=49.89 Aligned_cols=21 Identities=24% Similarity=0.378 Sum_probs=18.3
Q ss_pred CEEEEeccccceEEEEEeCCe
Q 021272 8 PAIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g~ 28 (315)
+++|||+|||+|++++++++.
T Consensus 2 ~~lGID~GsT~tk~av~d~~~ 22 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNGE 22 (276)
T ss_dssp EEEEEEECSSCEEEEEEETTT
T ss_pred eEEEEEcCccEEEEEEEECCC
Confidence 489999999999999987654
No 26
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=90.94 E-value=0.17 Score=45.41 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=18.5
Q ss_pred EEEEeccccceEEEEE-eCCeEEEE
Q 021272 9 AIGIDLGTTYSCVGVW-QHDRVEII 32 (315)
Q Consensus 9 ~iGID~GTtns~va~~-~~g~~~vi 32 (315)
++||||||+|+++++. .+|.+..+
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~ 26 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQH 26 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEE
T ss_pred eEEEecCCccceEEEecCCCEEEEE
Confidence 6999999999999985 45654433
No 27
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=90.37 E-value=0.16 Score=48.70 Aligned_cols=28 Identities=29% Similarity=0.340 Sum_probs=19.4
Q ss_pred CCCCCCCCEEEEeccccceEEEEEe-CCe
Q 021272 1 MAGKGEGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 1 ~~~~~~~~~iGID~GTtns~va~~~-~g~ 28 (315)
|+..++..++|||+|||+++++++. +|+
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~G~ 29 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLPDT 29 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETTTE
T ss_pred CCcccCCEEEEEEecCcceEEEEECCCCC
Confidence 6666778999999999999999996 454
No 28
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=87.60 E-value=0.11 Score=48.29 Aligned_cols=55 Identities=18% Similarity=0.145 Sum_probs=0.0
Q ss_pred CCEEEEeccccceEEEEEeCCeEEE-EEcCCCCcccceEE---EecCCceeecHHHHHh
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEI-IANDQGNRTTPSYV---AFTDTERLIGDAAKNQ 61 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~v-i~~~~~~~~~PS~v---~~~~~~~~vG~~A~~~ 61 (315)
...|+||+||.++.+++.....|.+ +++--+....++.. .+.....+||..|...
T Consensus 6 ~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 64 (394)
T 1k8k_B 6 RKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASEL 64 (394)
T ss_dssp -----------------------------------------------------------
T ss_pred CCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhc
Confidence 3578999999999999887665643 44333333222221 1122356789988654
No 29
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=85.63 E-value=0.52 Score=45.28 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=19.7
Q ss_pred CCCEEEEeccccceEEEEEe--CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ--HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~--~g~ 28 (315)
+..++|||+|||+++++++. +|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~ 28 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE 28 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC
T ss_pred CcEEEEEEeccccEEEEEEECCCCe
Confidence 45799999999999999997 454
No 30
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=84.55 E-value=0.55 Score=45.74 Aligned_cols=24 Identities=21% Similarity=0.260 Sum_probs=19.7
Q ss_pred CCCEEEEeccccceEEEEEe--CCeE
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ--HDRV 29 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~--~g~~ 29 (315)
+..++|||+|||+++++++. +|++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i 29 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQE 29 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCE
T ss_pred CCEEEEEecCCcceEEEEEECCCCeE
Confidence 56899999999999999996 5554
No 31
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=84.34 E-value=0.58 Score=45.32 Aligned_cols=23 Identities=35% Similarity=0.592 Sum_probs=19.4
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
+..++|||+|||+++++++. +|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~ 27 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGR 27 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC
T ss_pred CcEEEEEEECcccEEEEEECCCCC
Confidence 56899999999999999995 443
No 32
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=84.10 E-value=0.54 Score=44.99 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=32.8
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEEcCCCCcccceEEEecCC----ceeecHHH
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT----ERLIGDAA 58 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~~~~~~~~~PS~v~~~~~----~~~vG~~A 58 (315)
-..|+||+||.++.+++...+.|.++ +||+|+.... ..+||..|
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~ 70 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQS 70 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTG
T ss_pred CCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHH
Confidence 35799999999999888765555444 4899988532 56889864
No 33
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=84.01 E-value=0.48 Score=45.21 Aligned_cols=21 Identities=48% Similarity=0.802 Sum_probs=16.2
Q ss_pred CCCCEEEEeccccceEEEEEe
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~ 25 (315)
.+..++|||+|||+++++++.
T Consensus 4 mm~~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 4 STGATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp ----CEEEEECSSEEEEEEEC
T ss_pred hhceEEEEEcCCCCeEEEEEE
Confidence 467899999999999999995
No 34
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=83.05 E-value=0.64 Score=44.49 Aligned_cols=21 Identities=29% Similarity=0.286 Sum_probs=18.3
Q ss_pred CCCEEEEeccccceEEEEEeC
Q 021272 6 EGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~ 26 (315)
+..++|||+|||+++++++..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~ 23 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI 23 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEecCCceEEEEEcC
Confidence 457999999999999999953
No 35
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=82.44 E-value=0.66 Score=42.07 Aligned_cols=16 Identities=25% Similarity=0.260 Sum_probs=14.0
Q ss_pred CEEEEeccccceEEEE
Q 021272 8 PAIGIDLGTTYSCVGV 23 (315)
Q Consensus 8 ~~iGID~GTtns~va~ 23 (315)
..+|||+||+|++++.
T Consensus 22 ~~igiDlG~~~tkv~~ 37 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG 37 (346)
T ss_dssp EEEEEEECSSEEEEEC
T ss_pred EEEEEecCCcceeEEe
Confidence 4689999999999874
No 36
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=82.29 E-value=0.8 Score=40.50 Aligned_cols=21 Identities=24% Similarity=0.259 Sum_probs=18.2
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|+|++.++++. +|.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~ 33 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT 33 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC
T ss_pred EEEEEEcCccceEEEEEcCCCC
Confidence 799999999999999986 443
No 37
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=81.94 E-value=0.86 Score=43.99 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=18.5
Q ss_pred CCCEEEEeccccceEEEEEeC
Q 021272 6 EGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~ 26 (315)
+..++|||+|||+++++++..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 468999999999999999863
No 38
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=81.57 E-value=0.97 Score=43.21 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=19.3
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
+..++|||+|||++.++++. +|.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~ 27 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK 27 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC
T ss_pred CCEEEEEEcCCCceEEEEECCCCC
Confidence 46799999999999999995 344
No 39
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=81.02 E-value=0.95 Score=43.36 Aligned_cols=23 Identities=17% Similarity=0.029 Sum_probs=19.4
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
+..++|||+|||+++++++. +|+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~ 27 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGG 27 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSC
T ss_pred ccEEEEEEeCCCceEEEEECCCCC
Confidence 56899999999999999985 343
No 40
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=79.94 E-value=0.84 Score=43.36 Aligned_cols=20 Identities=20% Similarity=0.247 Sum_probs=17.6
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
+..++|||+|||+++++++.
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 45689999999999999985
No 41
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=79.83 E-value=1.1 Score=43.09 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=18.6
Q ss_pred CCEEEEeccccceEEEEEe-CCe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~-~g~ 28 (315)
..++|||+|||+++++++. +|.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~ 48 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK 48 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC
T ss_pred CeEEEEEeCCcceEEEEECCCCC
Confidence 4789999999999999995 443
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=79.17 E-value=1.4 Score=38.43 Aligned_cols=21 Identities=29% Similarity=0.412 Sum_probs=18.2
Q ss_pred CEEEEeccccceEEEEEeC-Ce
Q 021272 8 PAIGIDLGTTYSCVGVWQH-DR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~-g~ 28 (315)
.++|||+|+|+++++++.. |.
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~g~ 25 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDGKE 25 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTE
T ss_pred EEEEEEeccceEEEEEEeCCCC
Confidence 6899999999999999875 53
No 43
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=79.11 E-value=1.2 Score=42.50 Aligned_cols=23 Identities=30% Similarity=0.312 Sum_probs=19.0
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
+..++|||+|||+++++++. +|+
T Consensus 5 ~~~~lgIDiGtts~k~~l~d~~G~ 28 (501)
T 3g25_A 5 EKYILSIDQGTTSSRAILFNQKGE 28 (501)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSC
T ss_pred ccEEEEEEeCccceEEEEEcCCCC
Confidence 34799999999999999995 443
No 44
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=78.78 E-value=1.1 Score=42.69 Aligned_cols=19 Identities=26% Similarity=0.272 Sum_probs=16.7
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
..++|||+|||+++++++.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d 20 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFT 20 (495)
T ss_dssp -CEEEEEECSSEEEEEEEC
T ss_pred cEEEEEeeCCcceEEEEEC
Confidence 3689999999999999995
No 45
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=78.33 E-value=1.1 Score=43.07 Aligned_cols=19 Identities=32% Similarity=0.253 Sum_probs=17.2
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
.+++|||+|||++.++++.
T Consensus 4 kYvlgID~GTss~Ka~l~d 22 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMD 22 (526)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEccccceeeeEEc
Confidence 5789999999999999985
No 46
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=78.23 E-value=1.2 Score=42.56 Aligned_cols=23 Identities=26% Similarity=0.232 Sum_probs=19.0
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
+..++|||+|||+++++++. +|+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~ 25 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDAN 25 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCC
T ss_pred CcEEEEEEcCCcceEEEEECCCCC
Confidence 35789999999999999995 443
No 47
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=77.32 E-value=1.2 Score=42.61 Aligned_cols=19 Identities=21% Similarity=0.197 Sum_probs=17.2
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
..++|||+|||+++++++.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEEC
Confidence 4689999999999999995
No 48
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=75.14 E-value=1.8 Score=38.23 Aligned_cols=25 Identities=28% Similarity=0.295 Sum_probs=19.4
Q ss_pred CCCCEEEEeccccceEEEEEeCCeE
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQHDRV 29 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~~g~~ 29 (315)
+....+|||+|+|.++++++.++..
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~~~~i 42 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQDNQR 42 (287)
T ss_dssp ---CEEEEEECSSEEEEEEECSSCE
T ss_pred CCCeEEEEEEChhhEEEEEEcCCEE
Confidence 3467899999999999999977653
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=74.69 E-value=1.6 Score=41.52 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=17.6
Q ss_pred CCEEEEeccccceEEEEEeC
Q 021272 7 GPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~ 26 (315)
..++|||+|||++.++++..
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 46899999999999999953
No 50
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=73.80 E-value=2.5 Score=36.85 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=19.5
Q ss_pred CEEEEeccccceEEEEEeCCeE
Q 021272 8 PAIGIDLGTTYSCVGVWQHDRV 29 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g~~ 29 (315)
..++||.|+||++.+++.++..
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~l 24 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDEI 24 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTEE
T ss_pred eEEEEEECCCeEEEEEEECCEE
Confidence 4899999999999999988743
No 51
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=70.73 E-value=2.5 Score=40.04 Aligned_cols=20 Identities=40% Similarity=0.439 Sum_probs=17.2
Q ss_pred EEEEeccccceEEEEEe-CCe
Q 021272 9 AIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 9 ~iGID~GTtns~va~~~-~g~ 28 (315)
++|||+|||++.++++. +|.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~ 22 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE 22 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCcccEEEEECCCCC
Confidence 69999999999999995 443
No 52
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=69.49 E-value=2.5 Score=40.27 Aligned_cols=21 Identities=33% Similarity=0.333 Sum_probs=17.8
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|||++.++++. +|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~ 24 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE 24 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC
T ss_pred EEEEEecCCcceEEEEECCCCC
Confidence 589999999999999995 343
No 53
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=69.23 E-value=3.7 Score=32.03 Aligned_cols=21 Identities=33% Similarity=0.358 Sum_probs=18.5
Q ss_pred CCEEEEeccccceEEEEEeCC
Q 021272 7 GPAIGIDLGTTYSCVGVWQHD 27 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g 27 (315)
+.++|||||+..+=||+..+.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 468999999999999998764
No 54
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=68.54 E-value=3 Score=32.98 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=16.7
Q ss_pred CEEEEeccccceEEEEEeC
Q 021272 8 PAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~ 26 (315)
.++|||+|+..|-+|+...
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 5899999999999998754
No 55
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=66.95 E-value=3.9 Score=29.87 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=16.8
Q ss_pred CEEEEeccccceEEEEEeC
Q 021272 8 PAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~ 26 (315)
.++|||||+..+=||+...
T Consensus 2 riLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEE 20 (98)
T ss_dssp CEEEEEESSSEEEEEEECS
T ss_pred cEEEEEeCCCEEEEEEEeC
Confidence 3899999999999998865
No 56
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=66.68 E-value=5 Score=34.32 Aligned_cols=19 Identities=32% Similarity=0.366 Sum_probs=16.3
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
..++|||+||+++.+.++.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~ 46 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTD 46 (272)
T ss_dssp CCEEEEECCSSEEEEEEEC
T ss_pred CEEEEEEcccceEEEEEEC
Confidence 4689999999999988864
No 57
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=64.45 E-value=5.1 Score=34.98 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=17.5
Q ss_pred EEEEeccccceEEEEEeCCe
Q 021272 9 AIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 9 ~iGID~GTtns~va~~~~g~ 28 (315)
++|||+|.|++.++++.+|.
T Consensus 2 ~lgiDiGGT~~~~~l~d~g~ 21 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGK 21 (291)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEeCccceEEEEEeCCe
Confidence 79999999999999988543
No 58
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=62.97 E-value=8.5 Score=30.67 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=18.7
Q ss_pred CEEEEeccccceEEEEEe--CCeEEEE
Q 021272 8 PAIGIDLGTTYSCVGVWQ--HDRVEII 32 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~--~g~~~vi 32 (315)
.++|||.|++++=.+++. ++++.++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v 28 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYL 28 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEE
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEE
Confidence 389999999999888874 3444444
No 59
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=62.57 E-value=47 Score=26.11 Aligned_cols=47 Identities=11% Similarity=0.254 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHhcC---ccccHHHHHHHHHHHHHHHHHHHHHHH
Q 021272 233 ADKKRIEDTIEEAMQWLDSN---QLAEADEFEDKMKELESICNPIIAKMY 279 (315)
Q Consensus 233 ~e~~~l~~~l~e~e~wL~~~---~~a~~~~~~~kl~~L~~~~~pi~~r~~ 279 (315)
.+|..+...|..+....... -....++|+.++..+..+...+...+.
T Consensus 96 ~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 96 EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46778888887777665552 233578899999999888877766553
No 60
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=62.37 E-value=4.9 Score=35.81 Aligned_cols=21 Identities=24% Similarity=0.093 Sum_probs=18.1
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|+|++.++++. .|.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~ 28 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK 28 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC
T ss_pred EEEEEEcCccceEEEEEeCCCC
Confidence 799999999999999986 443
No 61
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=61.53 E-value=4.1 Score=36.18 Aligned_cols=20 Identities=40% Similarity=0.659 Sum_probs=17.6
Q ss_pred CCEEEEeccccceEEEEEeC
Q 021272 7 GPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~ 26 (315)
..++|||+|+|++.++++..
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~ 21 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE 21 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 47899999999999999853
No 62
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=59.81 E-value=6.1 Score=34.43 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=18.0
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|+|++.++++. +|.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~ 24 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN 24 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC
T ss_pred EEEEEEeCCCcEEEEEEcCCCC
Confidence 689999999999999985 343
No 63
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=58.01 E-value=6 Score=35.21 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=19.7
Q ss_pred CCCCEEEEeccccceEEEEEe--CCeE
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQ--HDRV 29 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~--~g~~ 29 (315)
++..++|||+|.|++.++++. +|.+
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i 38 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEI 38 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCCEEEEEEechhheEEEEEECCCCcE
Confidence 467899999999999999997 3543
No 64
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=56.91 E-value=4.7 Score=35.23 Aligned_cols=20 Identities=20% Similarity=0.026 Sum_probs=15.8
Q ss_pred EEEEeccccceEEEEEeCCe
Q 021272 9 AIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 9 ~iGID~GTtns~va~~~~g~ 28 (315)
++|||+|.|++.++++.+|.
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~ 21 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGA 21 (291)
T ss_dssp --CEECCTTCEEEEEECSSS
T ss_pred EEEEEeccccEEEEEEcCCe
Confidence 68999999999999987443
No 65
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=54.35 E-value=3.6 Score=38.39 Aligned_cols=25 Identities=32% Similarity=0.272 Sum_probs=18.6
Q ss_pred CCCEEEEeccccceEEEEEeCCeEE
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRVE 30 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~~ 30 (315)
....|-||.||.++.+++..+..|.
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~ 28 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPS 28 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCS
T ss_pred CCCeEEEECCCCeEEEEECCCCCCC
Confidence 3457889999999999987665553
No 66
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=52.32 E-value=10 Score=27.02 Aligned_cols=23 Identities=17% Similarity=0.453 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Q 021272 259 EFEDKMKELESICNPIIAKMYQG 281 (315)
Q Consensus 259 ~~~~kl~~L~~~~~pi~~r~~e~ 281 (315)
.++.-.++.+-+.+|...+.+..
T Consensus 47 ~f~~i~~Ay~~L~d~~~R~~YD~ 69 (92)
T 2o37_A 47 KFKEISEAFEILNDPQKREIYDQ 69 (92)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHH
Confidence 33333333444444555554443
No 67
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=52.19 E-value=7.3 Score=34.29 Aligned_cols=20 Identities=35% Similarity=0.418 Sum_probs=17.8
Q ss_pred CCEEEEeccccceEEEEEeC
Q 021272 7 GPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~ 26 (315)
..++|||+|+|++.++++..
T Consensus 6 ~~~lgiDiggt~~~~~l~d~ 25 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTT 25 (326)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 57899999999999999863
No 68
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=52.10 E-value=91 Score=25.06 Aligned_cols=18 Identities=17% Similarity=0.215 Sum_probs=12.5
Q ss_pred CCCHHHHHHHHHHHHHhh
Q 021272 177 RLSKEEIEKMVQEAEKYK 194 (315)
Q Consensus 177 ~Ls~~ei~~~~~~~~~~~ 194 (315)
.||+++..++.+..+++.
T Consensus 67 nLT~EQq~ql~~I~~e~r 84 (175)
T 3lay_A 67 PLTTEQQATAQKIYDDYY 84 (175)
T ss_dssp -CCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 489998888766655554
No 69
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=51.45 E-value=11 Score=32.65 Aligned_cols=21 Identities=24% Similarity=0.561 Sum_probs=18.6
Q ss_pred EEEEeccccceEEEEEeCCeE
Q 021272 9 AIGIDLGTTYSCVGVWQHDRV 29 (315)
Q Consensus 9 ~iGID~GTtns~va~~~~g~~ 29 (315)
.+.||.|+||++.+++.++..
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l 22 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGEL 22 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEE
T ss_pred EEEEEECcCcEEEEEEECCEE
Confidence 588999999999999998753
No 70
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=51.22 E-value=8.8 Score=36.04 Aligned_cols=20 Identities=30% Similarity=0.268 Sum_probs=17.7
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
.+.++|||||.||..|+++.
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~ 86 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVT 86 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEe
Confidence 35689999999999999985
No 71
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=51.02 E-value=9 Score=33.60 Aligned_cols=20 Identities=35% Similarity=0.650 Sum_probs=17.5
Q ss_pred CEEEEeccccceEEEEEeCC
Q 021272 8 PAIGIDLGTTYSCVGVWQHD 27 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g 27 (315)
.++|||+|+|++.++++...
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred EEEEEEEcCCEEEEEEEeCC
Confidence 58999999999999988654
No 72
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=50.98 E-value=13 Score=33.83 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.7
Q ss_pred CCEEEEeccccceEEEEEeCC
Q 021272 7 GPAIGIDLGTTYSCVGVWQHD 27 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g 27 (315)
..++|||+|.|++.++++..+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 358999999999999999876
No 73
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=50.53 E-value=15 Score=29.54 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=15.8
Q ss_pred CEEEEeccccceEEEEEe
Q 021272 8 PAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~ 25 (315)
.++|||.|++++=.+++.
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 489999999999998874
No 74
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=50.43 E-value=9.1 Score=36.04 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=19.3
Q ss_pred CCCEEEEeccccceEEEEEe-CCeE
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDRV 29 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~~ 29 (315)
.+.++|||+|.||..|+++. +|..
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTE
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45689999999999999994 4443
No 75
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=49.10 E-value=21 Score=31.46 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=24.3
Q ss_pred CCCEEEEeccccceEEEEEeCCeE-EEEEcCCCCccc
Q 021272 6 EGPAIGIDLGTTYSCVGVWQHDRV-EIIANDQGNRTT 41 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~g~~-~vi~~~~~~~~~ 41 (315)
...+|+||.||||..+-.+.+|.+ +-...+.|-..+
T Consensus 5 ~~~~IavDWGTs~lRa~l~~~g~vl~~~~~~~Gv~~~ 41 (295)
T 3nuw_A 5 TARYIAIDWGSTNLRAWLYQGEECLESRQSEAGVTRL 41 (295)
T ss_dssp GCEEEEEEECSSCEEEEEEETTEEEEEEEESCCTTCC
T ss_pred CccEEEEEecchheeeeeecCCceehhhcCCCchhhc
Confidence 356899999999999888886643 333334444333
No 76
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=48.09 E-value=11 Score=33.35 Aligned_cols=22 Identities=32% Similarity=0.409 Sum_probs=18.0
Q ss_pred CCCCEEEEeccccceEEEEEeC
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~~ 26 (315)
....++|||+|.|++.++++..
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~ 38 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTP 38 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECT
T ss_pred cCcEEEEEEECCCEEEEEEEcC
Confidence 4578999999999999999853
No 77
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=47.69 E-value=11 Score=32.38 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=18.4
Q ss_pred CEEEEeccccceEEEEEeCCe
Q 021272 8 PAIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g~ 28 (315)
..+.||.|+||++.+++.++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 378999999999999998664
No 78
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=47.58 E-value=9.2 Score=32.68 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 021272 233 ADKKRIEDTIEEAMQWLDS 251 (315)
Q Consensus 233 ~e~~~l~~~l~e~e~wL~~ 251 (315)
+-+.++...+.++..||..
T Consensus 169 e~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 169 ELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcch
Confidence 4455555555555555543
No 79
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=45.73 E-value=87 Score=23.00 Aligned_cols=42 Identities=21% Similarity=0.393 Sum_probs=31.2
Q ss_pred cCCHHHHHHHHHHHHHHHHHHhcC-ccccHHHHHHHHHHHHHH
Q 021272 229 KLSAADKKRIEDTIEEAMQWLDSN-QLAEADEFEDKMKELESI 270 (315)
Q Consensus 229 ~~~~~e~~~l~~~l~e~e~wL~~~-~~a~~~~~~~kl~~L~~~ 270 (315)
.+-|+-+..|...+..++++|... +....++|......|...
T Consensus 62 ~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l~~a 104 (108)
T 1h7c_A 62 MMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSV 104 (108)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHH
Confidence 455778899999999999999863 335667777776666543
No 80
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=44.92 E-value=20 Score=32.48 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=19.9
Q ss_pred CCCCEEEEeccccceEEEEEeCCe
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~~g~ 28 (315)
....++|||+|.|++.++++..|.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d~G~ 30 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQGGK 30 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEETTE
T ss_pred CCCEEEEEEECcceEEEEEEECCE
Confidence 346789999999999999988543
No 81
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=44.84 E-value=11 Score=33.42 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=18.4
Q ss_pred CCEEEEeccccceEEEEEe-CCe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~-~g~ 28 (315)
..++|||+|+|++.++++. .|.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~ 52 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGE 52 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSC
T ss_pred cEEEEEEECCCEEEEEEECCCCc
Confidence 4689999999999999986 443
No 82
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=44.45 E-value=28 Score=31.32 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=17.8
Q ss_pred CCEEEEeccccceEEEEEeCCeEEEEE
Q 021272 7 GPAIGIDLGTTYSCVGVWQHDRVEIIA 33 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~g~~~vi~ 33 (315)
..++|||+|..++++ ..++..-+.|
T Consensus 4 ~~iigiD~G~~~~K~--~~~~~~~~fP 28 (355)
T 3js6_A 4 VYVMALDFGNGFVKG--KINDEKFVIP 28 (355)
T ss_dssp EEEEEEEECSSEEEE--EETTEEEEEE
T ss_pred cEEEEEEcCCCcEEE--ecCCeEEEec
Confidence 458999999999995 4455544444
No 83
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=44.43 E-value=13 Score=32.43 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=18.4
Q ss_pred CCEEEEeccccceEEEEEe-CCe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~-~g~ 28 (315)
..++|||+|.|++.++++. .|.
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~ 26 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGE 26 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSC
T ss_pred cEEEEEEeCCCeEEEEEECCCCC
Confidence 3699999999999999985 443
No 84
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=43.59 E-value=13 Score=34.35 Aligned_cols=20 Identities=25% Similarity=0.119 Sum_probs=16.8
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
...++|||+||+..++.+..
T Consensus 7 ~~~ivglDIGts~I~~vv~~ 26 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLG 26 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEccCCEEEEEEEE
Confidence 45789999999999987764
No 85
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=43.49 E-value=5.2 Score=35.78 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=31.4
Q ss_pred CCEEEEeccccceEEEEE-eCC-----eEEEEEcCCCC--------cccceEEEecCCceeecHHHH
Q 021272 7 GPAIGIDLGTTYSCVGVW-QHD-----RVEIIANDQGN--------RTTPSYVAFTDTERLIGDAAK 59 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~-~~g-----~~~vi~~~~~~--------~~~PS~v~~~~~~~~vG~~A~ 59 (315)
..++|||+|..|++++.. .+| +....+..-+. ....-.|.|.+..++||..|.
T Consensus 7 ~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~ 73 (329)
T 4apw_A 7 EYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGV 73 (329)
T ss_dssp EEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSS
T ss_pred ceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccc
Confidence 458999999999998864 221 11223321100 001235777777889999764
No 86
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=42.96 E-value=94 Score=22.57 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=35.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 021272 228 SKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGVA 284 (315)
Q Consensus 228 ~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~~~ 284 (315)
..+-..++.++...|++-.+-++. ..+.+..++..+......+...+++..++
T Consensus 61 ~vfv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~ 113 (117)
T 2zqm_A 61 TLIVKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRP 113 (117)
T ss_dssp TEEEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 334445666666666666666655 56777778888887777777777776544
No 87
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=42.76 E-value=13 Score=35.83 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=16.2
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
..++|||.|||.+++++.+
T Consensus 2 ~~i~GiDIGnsttev~l~~ 20 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALAS 20 (607)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEecCceEEEEEEE
Confidence 4689999999999988763
No 88
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=42.42 E-value=12 Score=35.46 Aligned_cols=19 Identities=32% Similarity=0.378 Sum_probs=17.2
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
+.+++||||.||..|+.+.
T Consensus 80 G~~LalDlGGTn~Rv~~V~ 98 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVK 98 (485)
T ss_dssp EEEEEEEESSSEEEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEE
Confidence 5699999999999999984
No 89
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=42.42 E-value=11 Score=33.09 Aligned_cols=23 Identities=17% Similarity=0.266 Sum_probs=19.2
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
...++|||+|.|++.++++. .|.
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~~G~ 29 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTAEGE 29 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC
T ss_pred CCEEEEEEeCCCEEEEEEECCCCC
Confidence 45799999999999999986 343
No 90
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=41.30 E-value=8.4 Score=39.63 Aligned_cols=20 Identities=30% Similarity=0.345 Sum_probs=17.8
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
.+.++|||||.||..|+++.
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~ 544 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVK 544 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEE
T ss_pred ceEEEEEEECCCcEEEEEEE
Confidence 45789999999999999985
No 91
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=41.20 E-value=17 Score=30.95 Aligned_cols=19 Identities=42% Similarity=0.581 Sum_probs=17.3
Q ss_pred CCEEEEeccccceEEEEEe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~ 25 (315)
..++|||+|.|++.++++.
T Consensus 12 ~~~lgidiggt~i~~~l~d 30 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVD 30 (267)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEECCCEEEEEEEE
Confidence 4689999999999999997
No 92
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=40.04 E-value=16 Score=32.93 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=18.2
Q ss_pred CCCEEEEeccccceEEEEEeC
Q 021272 6 EGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~ 26 (315)
+..++|||+|.|++.++++..
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 457899999999999999863
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=39.98 E-value=17 Score=31.93 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=18.4
Q ss_pred CCEEEEeccccceEEEEEe-CCe
Q 021272 7 GPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~-~g~ 28 (315)
..++|||+|.|++.++++. .|.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~ 25 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGT 25 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSC
T ss_pred cEEEEEEECcceeEEEEEECCCc
Confidence 4689999999999999985 343
No 94
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=39.84 E-value=78 Score=24.25 Aligned_cols=93 Identities=12% Similarity=0.213 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHHHHhhhhchHHH----------HHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHH
Q 021272 177 RLSKEEIEKMVQEAEKYKSEDEEHK----------KKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAM 246 (315)
Q Consensus 177 ~Ls~~ei~~~~~~~~~~~~~D~~~~----------~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e 246 (315)
..|.++|.++..-...+...-...- ...+.+|-+-.-+..+|..|. .+...+.+.++.+..++-+++.
T Consensus 16 tysp~~i~~Iq~y~~~i~~ar~Rl~e~L~~lI~~~~W~~~Rn~IhGPlg~lr~~m~--~l~~~Llp~dqk~A~~lak~l~ 93 (133)
T 3ls0_A 16 TYSPEKIAQLQVYVNPIAVARDGMEKRLQGLIADQNWVDTQTYIHGPLGQLRRDML--GLASSLLPKDQDKAKTLAKEVF 93 (133)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHTTTTTHHHHHH--HHHHHSCHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhcchHHHHHHHhchHHHHHHHHH--HHHHhcChhhhHHHHHHHHHHH
Confidence 4677777776554444332111111 123445555555555665554 3455667788877777777777
Q ss_pred HHHhc-C-------ccccHHHHHHHHHHHHHHH
Q 021272 247 QWLDS-N-------QLAEADEFEDKMKELESIC 271 (315)
Q Consensus 247 ~wL~~-~-------~~a~~~~~~~kl~~L~~~~ 271 (315)
+-|.+ + -..-...|++-...+.+..
T Consensus 94 ~~L~~LD~AA~~~n~~~a~k~Y~~a~adfdafl 126 (133)
T 3ls0_A 94 GHLERLDAAAKDRNGSQAKIQYQEALADFDSFL 126 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 76664 2 1122455555555555543
No 95
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=38.52 E-value=20 Score=30.73 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=17.8
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|.|++.++++. .|.
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~ 23 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQ 23 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCC
T ss_pred eEEEEEeCCCEEEEEEECCCCC
Confidence 489999999999999985 454
No 96
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=38.17 E-value=18 Score=32.95 Aligned_cols=21 Identities=0% Similarity=-0.053 Sum_probs=18.2
Q ss_pred CCCEEEEeccccceEEEEEeC
Q 021272 6 EGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~~ 26 (315)
...++|||+|+|++.++++..
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~ 104 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL 104 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET
T ss_pred ccEEEEEEEcCCEEEEEEEcC
Confidence 357899999999999999863
No 97
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=37.47 E-value=18 Score=31.99 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=18.0
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|.|++.++++. .|.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~ 46 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE 46 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC
T ss_pred EEEEEEECCCEEEEEEEeCCCc
Confidence 789999999999999985 343
No 98
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=37.32 E-value=26 Score=30.42 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=18.5
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
..+-||.|+||++++++. ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 478999999999999998 664
No 99
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=36.59 E-value=19 Score=32.56 Aligned_cols=20 Identities=10% Similarity=0.141 Sum_probs=17.6
Q ss_pred CCEEEEeccccceEEEEEeC
Q 021272 7 GPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~ 26 (315)
..++|||+|+|++.++++..
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~ 106 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDA 106 (380)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred CeEEEEEECCCEEEEEEECC
Confidence 56899999999999999863
No 100
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=36.32 E-value=22 Score=31.86 Aligned_cols=22 Identities=18% Similarity=0.141 Sum_probs=16.7
Q ss_pred CCCCEEEEeccccceEEEEEeC
Q 021272 5 GEGPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 5 ~~~~~iGID~GTtns~va~~~~ 26 (315)
....+|+||.||||..+-.+..
T Consensus 5 ~~~~~IavDWGTSnlRa~l~~~ 26 (330)
T 3t69_A 5 TAGYYAAVDWGTSSFRLWIIGE 26 (330)
T ss_dssp ---CEEEEEECSSCEEEEEECT
T ss_pred CCCCEEEEEecchheehheecC
Confidence 4567999999999999887753
No 101
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=35.13 E-value=94 Score=21.10 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=22.6
Q ss_pred HHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccC
Q 021272 190 AEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKL 230 (315)
Q Consensus 190 ~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~ 230 (315)
.+++...|..+++......+.++.|...|..|. +|...+
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD--KfrSVl 70 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELD--KYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccC
Confidence 445556666666665556666666666666553 444433
No 102
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=34.44 E-value=23 Score=31.06 Aligned_cols=23 Identities=30% Similarity=0.525 Sum_probs=18.9
Q ss_pred CCCEEEEeccccceEEEEEe-CCe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~-~g~ 28 (315)
...++|||+|.|++.++++. .|.
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~ 46 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRR 46 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCC
T ss_pred CceEEEEEECCCEEEEEEEeCCCC
Confidence 35689999999999999986 343
No 103
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=34.13 E-value=22 Score=36.52 Aligned_cols=20 Identities=30% Similarity=0.297 Sum_probs=17.7
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
.+.++|||||.||..|+++.
T Consensus 77 ~G~~laiDlGGTnirv~lv~ 96 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQ 96 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEE
Confidence 35689999999999999995
No 104
>3zsu_A TLL2057 protein, cyanoq; photosystem II assembly, photosynthesis, extrinsic protein; 1.60A {Thermosynechococcus elongatus}
Probab=33.81 E-value=1.6e+02 Score=22.47 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHHhhhh-ch--HHH------HHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHH
Q 021272 177 RLSKEEIEKMVQEAEKYKSE-DE--EHK------KKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQ 247 (315)
Q Consensus 177 ~Ls~~ei~~~~~~~~~~~~~-D~--~~~------~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~ 247 (315)
..|.++|.++..-...+... ++ +.. ...+.+|-+-.-+..+|..|. .+...+.+.++.+..++-+++.+
T Consensus 14 tysp~~i~~iq~y~~~i~~~r~Rl~eL~~lI~~~~W~~~Rn~IhGPlg~lr~~m~--~l~~~Llp~dqk~A~~lak~l~~ 91 (130)
T 3zsu_A 14 TYSELQITRIQDYLRDIEKNAERFADLEVSVAKGDWQEARNIMRGPLGEMLMDMR--ALNRNLLAKDQPTPTALTRALTD 91 (130)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHH--HHHHTSCGGGSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHhchHHHHHHHHH--HHHHhcCHhhHHHHHHHHHHHHH
Confidence 46777777665544433221 11 111 235567788888888887775 45566677777777766666666
Q ss_pred HHhc-C-------ccccHHHHHHHHHHHHHHH
Q 021272 248 WLDS-N-------QLAEADEFEDKMKELESIC 271 (315)
Q Consensus 248 wL~~-~-------~~a~~~~~~~kl~~L~~~~ 271 (315)
-|.+ + -..-...|++-...+.+..
T Consensus 92 ~L~~LD~AA~~~n~~~a~k~Y~~a~adfdafl 123 (130)
T 3zsu_A 92 DFLKIDQGADLDSVTVAQEGFREAEADFKAYL 123 (130)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 6654 1 1122455655555555543
No 105
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=33.43 E-value=1.9e+02 Score=23.21 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhc-C-ccccHHHHHHHHHHHHHH
Q 021272 235 KKRIEDTIEEAMQWLDS-N-QLAEADEFEDKMKELESI 270 (315)
Q Consensus 235 ~~~l~~~l~e~e~wL~~-~-~~a~~~~~~~kl~~L~~~ 270 (315)
++++...-.++..-+.. + |.+.+.++.+++.+|+..
T Consensus 91 r~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~q 128 (175)
T 3lay_A 91 RQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQK 128 (175)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 34444444455444433 2 333444444444444433
No 106
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=33.39 E-value=43 Score=25.48 Aligned_cols=13 Identities=8% Similarity=0.258 Sum_probs=5.7
Q ss_pred cCCHHHHHHHHHH
Q 021272 229 KLSAADKKRIEDT 241 (315)
Q Consensus 229 ~~~~~e~~~l~~~ 241 (315)
.+++++++...+.
T Consensus 52 ~l~~Ed~~RY~kQ 64 (126)
T 2wl8_A 52 SLPPEQFEKYQEQ 64 (126)
T ss_dssp GSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 3444444444433
No 107
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=33.37 E-value=88 Score=25.12 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021272 259 EFEDKMKELESICNPIIAKM 278 (315)
Q Consensus 259 ~~~~kl~~L~~~~~pi~~r~ 278 (315)
.+...+++|+....|....+
T Consensus 152 ~l~~~~e~lk~~l~Py~ee~ 171 (185)
T 3r2p_A 152 RARAHVDALRTHLAPYSDEL 171 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHH
Confidence 34455556666655555433
No 108
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=33.30 E-value=22 Score=30.67 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.8
Q ss_pred CEEEEeccccceEEEEEe-CCe
Q 021272 8 PAIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~-~g~ 28 (315)
.++|||+|.|++.++++. .|.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~ 26 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK 26 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC
T ss_pred EEEEEEECCCEEEEEEECCCCC
Confidence 489999999999999985 443
No 109
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=33.08 E-value=26 Score=32.82 Aligned_cols=20 Identities=30% Similarity=0.336 Sum_probs=17.7
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
.+.+++||||.||..|+.+.
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~ 77 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVR 77 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEE
T ss_pred eeEEEEEEecCCeEEEEEEE
Confidence 45789999999999999884
No 110
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=32.50 E-value=1.5e+02 Score=21.99 Aligned_cols=41 Identities=22% Similarity=0.286 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcC---ccccHHHHHHHHHHHHHH
Q 021272 230 LSAADKKRIEDTIEEAMQWLDSN---QLAEADEFEDKMKELESI 270 (315)
Q Consensus 230 ~~~~e~~~l~~~l~e~e~wL~~~---~~a~~~~~~~kl~~L~~~ 270 (315)
+-|+-+..|...+..++++|... +..+.++|......|...
T Consensus 64 mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~~a 107 (116)
T 3mxz_A 64 MIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVADV 107 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHH
Confidence 34677889999999999999852 335567777666666543
No 111
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=32.16 E-value=33 Score=30.76 Aligned_cols=20 Identities=20% Similarity=0.431 Sum_probs=15.2
Q ss_pred EEEEeccccceEEEEEe-CCe
Q 021272 9 AIGIDLGTTYSCVGVWQ-HDR 28 (315)
Q Consensus 9 ~iGID~GTtns~va~~~-~g~ 28 (315)
++|+|.|..|+++|... +|.
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~ 22 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGE 22 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTC
T ss_pred eeEEEecccceeeeeecCCCc
Confidence 79999999999999875 554
No 112
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=31.68 E-value=22 Score=32.72 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=17.6
Q ss_pred CCEEEEeccccceEEEEEeC
Q 021272 7 GPAIGIDLGTTYSCVGVWQH 26 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~~~ 26 (315)
..++|||+|+|++.++++..
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~ 127 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL 127 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET
T ss_pred CEEEEEEECCCEEEEEEECC
Confidence 46899999999999999863
No 113
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=30.24 E-value=1e+02 Score=25.02 Aligned_cols=20 Identities=10% Similarity=0.124 Sum_probs=11.9
Q ss_pred HHHHHHhHHHHHHHHHhhcc
Q 021272 203 KVEAKNALENYAYNMRNTIK 222 (315)
Q Consensus 203 ~~~~kn~LEs~iy~~r~~l~ 222 (315)
..+.+..|+-|.-++|..+.
T Consensus 108 lEelr~kL~P~~eEL~~~l~ 127 (191)
T 1nfn_A 108 MEDVCGRLVQYRGEVQAMLG 127 (191)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhHHHHHHHHHHH
Confidence 34455666666666666664
No 114
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=29.64 E-value=32 Score=32.45 Aligned_cols=20 Identities=30% Similarity=0.311 Sum_probs=17.5
Q ss_pred CCCEEEEeccccceEEEEEe
Q 021272 6 EGPAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 6 ~~~~iGID~GTtns~va~~~ 25 (315)
.+.+++||||.||..|+.+.
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~ 95 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVK 95 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEE
T ss_pred ceEEEEEEecCceEEEEEEE
Confidence 35799999999999999884
No 115
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=29.09 E-value=2.3e+02 Score=24.29 Aligned_cols=10 Identities=40% Similarity=0.328 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 021272 240 DTIEEAMQWL 249 (315)
Q Consensus 240 ~~l~e~e~wL 249 (315)
..++++..||
T Consensus 176 ~~~eeLr~~L 185 (273)
T 3s84_A 176 ASAEELRQRL 185 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333444444
No 116
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=28.16 E-value=27 Score=29.38 Aligned_cols=16 Identities=19% Similarity=0.434 Sum_probs=13.8
Q ss_pred CCCEEEEeccccceEE
Q 021272 6 EGPAIGIDLGTTYSCV 21 (315)
Q Consensus 6 ~~~~iGID~GTtns~v 21 (315)
...++|||+|.|++.+
T Consensus 5 ~~~~lgiDIGGT~i~~ 20 (226)
T 3lm2_A 5 DQTVLAIDIGGSHVKI 20 (226)
T ss_dssp GCCEEEEEECSSEEEE
T ss_pred CCEEEEEEECCCEEEE
Confidence 3578999999999995
No 117
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=28.00 E-value=2.3e+02 Score=22.56 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=22.9
Q ss_pred HHHHHhHHHHHHHHHhhccc--ccccccCCH---HHHHHHHHHHHHHHHHHh
Q 021272 204 VEAKNALENYAYNMRNTIKD--DQIGSKLSA---ADKKRIEDTIEEAMQWLD 250 (315)
Q Consensus 204 ~~~kn~LEs~iy~~r~~l~~--~~~~~~~~~---~e~~~l~~~l~e~e~wL~ 250 (315)
.+.+..|+-|.-++|..+.. +.+...+.+ +-+..+...++++..+|.
T Consensus 114 e~lr~~l~Py~~el~~~~~~~~e~Lr~~L~p~~e~lr~~l~~~~e~lk~~l~ 165 (185)
T 3r2p_A 114 ELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLA 165 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33455566666666655542 334434333 334455555555555443
No 118
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=26.39 E-value=43 Score=29.69 Aligned_cols=21 Identities=24% Similarity=0.370 Sum_probs=18.9
Q ss_pred CEEEEeccccceEEEEEeCCe
Q 021272 8 PAIGIDLGTTYSCVGVWQHDR 28 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~~g~ 28 (315)
.++|||.++..++||++.+|+
T Consensus 2 ~iLgIdts~~~~~val~~~g~ 22 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSEDK 22 (330)
T ss_dssp CEEEEECSSSEEEEEEECSSC
T ss_pred EEEEEEccCCCeEEEEEECCE
Confidence 489999999999999998874
No 119
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=25.93 E-value=85 Score=28.64 Aligned_cols=65 Identities=11% Similarity=0.228 Sum_probs=45.1
Q ss_pred HHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHH
Q 021272 206 AKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEADEFEDKMKELESI 270 (315)
Q Consensus 206 ~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~~~~~~kl~~L~~~ 270 (315)
++...++++|.+--.+.-.+..+.+...+..+....|.++.+||..-.++-..+++.........
T Consensus 160 A~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~aa~~a~~a 224 (412)
T 2ra1_A 160 AQALRDRLIYDITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQKAAQDAKAA 224 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhh
Confidence 34556777777766665456666677777888889999999999985555666666665554433
No 120
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=25.21 E-value=3e+02 Score=22.99 Aligned_cols=44 Identities=23% Similarity=0.221 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccc
Q 021272 179 SKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDD 224 (315)
Q Consensus 179 s~~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~ 224 (315)
+-.++.+...+-..|+..++ ..+..-|+.|+..++..+.+|..+
T Consensus 42 sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~~ 85 (235)
T 2odv_A 42 SFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQAG 85 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45566666666666765544 345666899999999999888753
No 121
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=25.07 E-value=1.7e+02 Score=24.49 Aligned_cols=48 Identities=10% Similarity=0.192 Sum_probs=30.6
Q ss_pred HHHHHhHHHHHHHHHhhccc--ccccccC---CHHHHHHHHHHHHHHHHHHhc
Q 021272 204 VEAKNALENYAYNMRNTIKD--DQIGSKL---SAADKKRIEDTIEEAMQWLDS 251 (315)
Q Consensus 204 ~~~kn~LEs~iy~~r~~l~~--~~~~~~~---~~~e~~~l~~~l~e~e~wL~~ 251 (315)
.+.+..|+-|+-++|..+.. +.+...+ .++-+.++...++++..-|..
T Consensus 113 eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P 165 (243)
T 2a01_A 113 ELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAP 165 (243)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566777777777766643 3343333 346678888888877777753
No 122
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=24.29 E-value=2e+02 Score=23.57 Aligned_cols=48 Identities=8% Similarity=0.180 Sum_probs=28.7
Q ss_pred HHHHHhHHHHHHHHHhhccc--ccccccCCH---HHHHHHHHHHHHHHHHHhc
Q 021272 204 VEAKNALENYAYNMRNTIKD--DQIGSKLSA---ADKKRIEDTIEEAMQWLDS 251 (315)
Q Consensus 204 ~~~kn~LEs~iy~~r~~l~~--~~~~~~~~~---~e~~~l~~~l~e~e~wL~~ 251 (315)
.+.+..|+-|.-++|..+.. +.+...+.+ +-+..+...++++...|.-
T Consensus 112 e~lr~~L~Py~~el~~~~~~~~e~Lr~~L~p~~e~lr~kl~~~~e~lk~~l~P 164 (216)
T 2lem_A 112 ELYRQKASPQGAELQESARQKLQELQGRLSPVAEEFRDRMRTHVDSLRTQLAP 164 (216)
T ss_dssp HHHHHHTSCHHHHHHHHHHCSCCSSCCSCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 44556666677777766643 445555543 4566666666666666654
No 123
>2hh3_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=23.21 E-value=44 Score=24.42 Aligned_cols=7 Identities=57% Similarity=1.061 Sum_probs=0.0
Q ss_pred CCCCCCC
Q 021272 291 PGPGMDE 297 (315)
Q Consensus 291 ~~~~~~~ 297 (315)
.|+||++
T Consensus 90 g~~~~~~ 96 (106)
T 2hh3_A 90 GGPGMPP 96 (106)
T ss_dssp -------
T ss_pred CCCCCCC
Confidence 3445554
No 124
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=22.12 E-value=2.2e+02 Score=20.32 Aligned_cols=73 Identities=16% Similarity=0.278 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHHhhhhchHHHHHHHHHHhHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhcCccccH
Q 021272 178 LSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDSNQLAEA 257 (315)
Q Consensus 178 Ls~~ei~~~~~~~~~~~~~D~~~~~~~~~kn~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~~~~a~~ 257 (315)
+..+|+..+...+++|.. .|..-...++..+. .+. ....+++.++.+.++++..-|..-.+ ..
T Consensus 6 ~dpeElr~Fa~~L~~F~d-------------~Lq~~~~~L~~~f~--~L~-sWqDqkr~kFee~fe~l~s~l~~f~e-~a 68 (94)
T 3fx7_A 6 MDTEEVREFVGHLERFKE-------------LLREEVNSLSNHFH--NLE-SWRDARRDKFSEVLDNLKSTFNEFDE-AA 68 (94)
T ss_dssp CCHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH--HCC-SCCSHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHh--ccc-hHhhHHHHHHHHHHHHHHHHHHHHHH-hh
Confidence 678888888877777742 22222223333332 333 46678889999888888888876322 34
Q ss_pred HHHHHHHHHH
Q 021272 258 DEFEDKMKEL 267 (315)
Q Consensus 258 ~~~~~kl~~L 267 (315)
.+|...|+++
T Consensus 69 ~e~vp~L~~~ 78 (94)
T 3fx7_A 69 QEQIAWLKER 78 (94)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhHHHHHH
Confidence 4554444444
No 125
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=22.03 E-value=56 Score=31.55 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=17.5
Q ss_pred CCEEEEeccccceEEEEE--eC-CeEEEEE
Q 021272 7 GPAIGIDLGTTYSCVGVW--QH-DRVEIIA 33 (315)
Q Consensus 7 ~~~iGID~GTtns~va~~--~~-g~~~vi~ 33 (315)
..++|||.|++.+-||+. .+ |.++.+.
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~ 31 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITH 31 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEee
Confidence 468899999666666654 43 5555544
No 126
>2lhr_A Iron-regulated surface determinant protein H; heme acquisition, iron uptake, NEAT domain, hemoglobin recep metal transport; NMR {Staphylococcus aureus subsp}
Probab=21.66 E-value=1e+02 Score=20.56 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=24.5
Q ss_pred hHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHHHHHHHhc
Q 021272 209 ALENYAYNMRNTIKDDQIGSKLSAADKKRIEDTIEEAMQWLDS 251 (315)
Q Consensus 209 ~LEs~iy~~r~~l~~~~~~~~~~~~e~~~l~~~l~e~e~wL~~ 251 (315)
.||.-||++. ++++.+++.-+.+..+.|+++...|+.
T Consensus 24 TLERqvYEL~------kiqdkLPeklkaeYk~KL~~tk~~Ld~ 60 (78)
T 2lhr_A 24 TLERQVYELE------KLQEKLPEKYKAEYKKKLDQTRVELAD 60 (78)
T ss_dssp SHHHHHHHHH------HHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4777777753 345567766677777777777666654
No 127
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=21.09 E-value=63 Score=27.78 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=16.8
Q ss_pred CEEEEeccccceEEEEEe
Q 021272 8 PAIGIDLGTTYSCVGVWQ 25 (315)
Q Consensus 8 ~~iGID~GTtns~va~~~ 25 (315)
.+++||+|+-|...|.+.
T Consensus 41 sIlSID~GikNlAyc~l~ 58 (258)
T 1kcf_A 41 RVLGIDLGIKNFSYCFAS 58 (258)
T ss_dssp SEEEEEECSTTEEEEEEE
T ss_pred cEEEEecCCCceEEEEEc
Confidence 799999999999999886
No 128
>4dkw_A Large terminase protein; DNA-packaging, small terminase, nuclease FO endonuclease, DNA, DNA-packaging motor, hydrolase; 2.02A {Enterobacteria phage P22}
Probab=20.66 E-value=57 Score=26.99 Aligned_cols=15 Identities=13% Similarity=-0.121 Sum_probs=11.6
Q ss_pred CCEEEEeccccceEE
Q 021272 7 GPAIGIDLGTTYSCV 21 (315)
Q Consensus 7 ~~~iGID~GTtns~v 21 (315)
...+|+|||+++-.+
T Consensus 27 ~~~~G~DfG~~~P~a 41 (211)
T 4dkw_A 27 YVIDAQDFGWNHPQA 41 (211)
T ss_dssp EEEEEEECCSSSCEE
T ss_pred eEEEEEECCCCCCcE
Confidence 357899999998544
No 129
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=20.42 E-value=2.9e+02 Score=21.26 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=11.3
Q ss_pred CCCHHHHHHHHHHHHHhh
Q 021272 177 RLSKEEIEKMVQEAEKYK 194 (315)
Q Consensus 177 ~Ls~~ei~~~~~~~~~~~ 194 (315)
.||.++..++.....++.
T Consensus 45 ~LTdeQkqqir~L~~~~r 62 (145)
T 3itf_A 45 SLTEHQRQQMRDLMQQAR 62 (145)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 378887777666544433
No 130
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=20.34 E-value=1.4e+02 Score=18.81 Aligned_cols=20 Identities=20% Similarity=0.317 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 021272 232 AADKKRIEDTIEEAMQWLDS 251 (315)
Q Consensus 232 ~~e~~~l~~~l~e~e~wL~~ 251 (315)
-++.+--...++++++||-.
T Consensus 43 mqeveiwtnrikeledwlwg 62 (67)
T 2nr5_A 43 MQEVEIWTNRIKELEDWLWG 62 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhc
Confidence 34555566778999999976
Done!