BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021279
         (315 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9I969|TXLNB_CHICK Beta-taxilin OS=Gallus gallus GN=TXLNB PE=2 SV=1
          Length = 676

 Score = 40.0 bits (92), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 17/191 (8%)

Query: 111 ITDDKEKLRRQLSASLAARKSLEVLCSSLGKEKEIMAGELARKVHELNE-MEELINDFKA 169
           IT +K++L+ + S ++ AR  LE LC  L +  + +  E  ++  E +E  +E+ N F+ 
Sbjct: 191 ITKEKDQLQSEHSRAILARSKLESLCRELQRHNKTLKEETIQRAREEDEKRKEITNHFQG 250

Query: 170 QNASLLAKVQNCAAEHKEKKCSAGEIQGNAALQERNKAL-------SEHLLKSLDGYRSL 222
             + + A+++   +E   K C     Q N  L E+ K++        EHL K    +R L
Sbjct: 251 TLSEIQAQIEQ-QSERNMKLC-----QENTELAEKLKSIIDQYELREEHLDKIF-KHREL 303

Query: 223 KKKYKYVKEENT--AMRATMEELGKKVEAGIDQILGFRQRIATKEEQEVDIEEEITALEG 280
           ++K    K E +   M+   E   K+ E  ++Q   ++ +    +EQE  ++ +IT    
Sbjct: 304 QQKLVDAKLEQSQEMMKEAEERHQKEKEYLLNQAAEWKLQAKMLKEQETVLQAQITLYSE 363

Query: 281 MFDSFNMKIKK 291
            F+ F   + K
Sbjct: 364 RFEEFQKTLTK 374


>sp|Q20060|SMC4_CAEEL Structural maintenance of chromosomes protein 4 OS=Caenorhabditis
           elegans GN=smc-4 PE=1 SV=1
          Length = 1549

 Score = 35.8 bits (81), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 48/91 (52%)

Query: 201 LQERNKALSEHLLKSLDGYRSLKKKYKYVKEENTAMRATMEELGKKVEAGIDQILGFRQR 260
            ++R++A  E   K  + +     ++  V+ E    R   E+L K   +G D+++  ++R
Sbjct: 473 FEKRSEAPKEEQKKIQETWAQKSNEFNKVRGEARIAREDFEDLKKLANSGTDKLIELKKR 532

Query: 261 IATKEEQEVDIEEEITALEGMFDSFNMKIKK 291
           + + EE     ++E+  L+  FDS+N K+K+
Sbjct: 533 LESSEESYAKEKDELDKLKPEFDSWNDKLKQ 563


>sp|Q9P3W6|YLI2_SCHPO Uncharacterized protein C458.02c OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPAC458.02c PE=1 SV=1
          Length = 468

 Score = 33.9 bits (76), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 32/143 (22%)

Query: 184 EHKEKKCSAGEIQGNAALQERNKALSEHLLKSLDGYRSLKKKYKYVKEENTAMRATMEEL 243
           EHKEK    G I+G  +LQE+N  L       LD  R+ +           A+R++ + L
Sbjct: 34  EHKEK---LGAIRGGGSLQEKNAELRAE----LDNIRNAQ----------AAIRSSKQTL 76

Query: 244 GKKVEA-------GIDQILGFRQRIATKEEQEVDIEEEITALEGMFDSFNMKI---KKHI 293
             KV+A        + ++   ++ +  K   EV++++ +  L+   DS  +KI   KK++
Sbjct: 77  INKVKAQDELLKKKVKELTAMKKTVPFK--SEVELDKHVKQLQAAVDSGTLKIVDEKKYL 134

Query: 294 QNKSDCGKPK---APINASKPSV 313
           +  S C + +     +NA + S+
Sbjct: 135 REISQCNRTRKSFVELNALQTSI 157


>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
          Length = 2701

 Score = 33.5 bits (75), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 105  KKLCEPITDDKEKLRRQL----SASLAARKSLEVLCSSLGKEKEIMA----------GEL 150
            +++ E +  +KE+L+  L      ++  ++ L +L   L K++EI+A          GEL
Sbjct: 1056 QQMLESVIAEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGEL 1115

Query: 151  ARKVHELNEMEELINDFKAQNASLLAKVQNCAAEHKEKKCSAGEIQGNAALQERNKALS- 209
            +R    L E+EE + +   Q      ++ N   E  E +    EI+ N   + +NK L+ 
Sbjct: 1116 SRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIE-NLKNELKNKELTL 1174

Query: 210  EHL-LKSLDGYRSLKKKYKYVKEENTAMRATMEELGKKVEAGIDQILGFRQRI-----AT 263
            EH+  + L+  + L + Y+ VK   T  R  ++EL K  E   D + G+ + I      T
Sbjct: 1175 EHMETERLELAQKLNENYEEVK-SITKERKVLKELQKSFETERDHLRGYIREIEATGLQT 1233

Query: 264  KEE 266
            KEE
Sbjct: 1234 KEE 1236


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.127    0.341 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,483,797
Number of Sequences: 539616
Number of extensions: 4195252
Number of successful extensions: 16937
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 755
Number of HSP's that attempted gapping in prelim test: 15711
Number of HSP's gapped (non-prelim): 1689
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)