BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021280
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 13/272 (4%)
Query: 32 LPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNY 91
+PPG GLP +GET+ F F KKR ++G +F+T + G+ VI + + N
Sbjct: 13 IPPGDFGLPWLGETLNFLNDGD------FGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 92 SIMNTENKSLLFWCTDGLSH--IFGNQNFLSQHGSVHKYLRSLVLHLTGREILRQKFLHE 149
+ E ++ F T LS + G +Q G +H+ R ++ L +L +
Sbjct: 67 FLFTKEQET--FQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTL-DSYLPK 123
Query: 150 IDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYRAFKLGI 209
+D + +L W + V M F+ A L ++ + +L + + G+
Sbjct: 124 MDGIVQGYLEQWGKA-NEVIWYPQLRRMTFD-VAATLFMGEKVSQNPQLFPWFETYIQGL 181
Query: 210 VSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENAVLND 269
S P+ P F + + R + +E I + R+ D L +L + N L+
Sbjct: 182 FSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSL 241
Query: 270 SNAIDLLFVLLFAAFETVSQSITLITKYLTDH 301
D + +LLFA ET++ +++ L H
Sbjct: 242 PELKDQILLLLFAGHETLTSALSSFCLLLGQH 273
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 25/288 (8%)
Query: 30 GKLPPGSMGL-PIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPV 88
GKLPP G P +G IQF + F+ K +YG +F NI G ++ V D V
Sbjct: 2 GKLPPVVHGTTPFVGHIIQFGK-----DPLGFMLKAKKKYGGIFTMNICGNRITVVGD-V 55
Query: 89 TNYSIMNTENKSLLF--WCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQK 145
+S T +L + +FG + + + + + L L LT + Q
Sbjct: 56 HQHSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKF--QN 113
Query: 146 FLHEIDQTTRAHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESK------YSKKL 198
F I R + + W G +N+ D C+ MI + + L D K +++ L
Sbjct: 114 FAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLL 173
Query: 199 RQNYRAFKLGIVSFP--MYFPGFAFYECIKGRKHIRKVIEDIY----QERKATKVPGHDF 252
+ V P + P Y C R ++ ++ +I +E D
Sbjct: 174 AKMESCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDTNTSDL 233
Query: 253 LDRVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTD 300
L +L V ++ ++ ++ +FA T + + T +L D
Sbjct: 234 LAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMD 281
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 118/305 (38%), Gaps = 36/305 (11%)
Query: 32 LPPGSMGLPIIGETIQFFTPYSLYETQP--FIKKRMARYGSVFRTNIAGQKVIVSTDPVT 89
LP G P I I F + P F++ +YG VF + G+
Sbjct: 6 LPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDA 65
Query: 90 NYSIMNTENKSL------------LFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLT 137
+ N++N+ L +F G+++ N FL Q + L + H
Sbjct: 66 AALLFNSKNEDLNAEDVYSRLTTPVF--GKGVAYDVPNPVFLEQKKMLKSGLN--IAHF- 120
Query: 138 GREILRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYD-ESKYSK 196
++ + I++ T+ + SW S G NV +A +E+I + + L + S+ ++
Sbjct: 121 ------KQHVSIIEKETKEYFESWGES-GEKNVFEALSELIILTASHCLHGKEIRSQLNE 173
Query: 197 KLRQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIY----QERKATKVPGHDF 252
K+ Q Y G PG+ + R + I+DI+ Q+R+ ++ D
Sbjct: 174 KVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDI 233
Query: 253 LDRVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQV-----LAE 307
L +L+ K+ L D +L LL A T S + + +L + L +
Sbjct: 234 LQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQ 293
Query: 308 LTVCA 312
TVC
Sbjct: 294 KTVCG 298
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 116/312 (37%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNTE-QMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTEN------KSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSL-VLHLTG 138
D V + E ++ W G F N G K LR + L G
Sbjct: 63 DAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSN-------GERAKQLRRFSIATLRG 115
Query: 139 REILRQKFLHEIDQTTRAHLHSWASSPG-----TVNVRDACAEMIFESCAKKLISYDESK 193
+ ++ I + + + + G T + + +I Y++ +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKE 175
Query: 194 YSKKLRQNYRAFKLGIVS----FPMY------FPG---FAFYECIKGRKHIRKVIEDIYQ 240
+ LR +F+ S + M+ PG AF E I K +E +
Sbjct: 176 FLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L FA ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 106/268 (39%), Gaps = 39/268 (14%)
Query: 30 GKLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDP 87
GKLPP + +P +G +QF P + KR + G VF +I GQ+V + DP
Sbjct: 6 GKLPPVYPVTVPFLGHIVQFGKNPLEFMQRC----KRDLKSG-VFTISIGGQRVTIVGDP 60
Query: 88 VTNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQK 145
+ + N+ L ++ +FG + + + + + L L LT + Q
Sbjct: 61 HEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--QN 118
Query: 146 FLHEIDQTTRAHL-HSWASSPGTVNVRDACAEMIFESCAKKLISYDESK------YSKKL 198
F+ I R + +W G +N+ + C MI + + L D K +++ L
Sbjct: 119 FVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLL 178
Query: 199 RQNYRAFKLGIVSFP--MYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRV 256
+ + V P + P C + R ++K++ +I R
Sbjct: 179 SKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAR-------------- 224
Query: 257 LEEVEKENAVLNDSNAIDLLFVLLFAAF 284
EKE A D+N DLL LL A +
Sbjct: 225 ----EKEEAS-KDNNTSDLLGGLLKAVY 247
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 113/312 (36%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNTE-QMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGR 139
D V + E ++ W G +F N G K LR +
Sbjct: 63 DAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRD 115
Query: 140 EILRQKFLHEIDQTTRAHLHSWASSPGTVNV------RDACAEMIFESCAKKLISYDESK 193
+ ++ + E Q L G N+ + +I Y + +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 194 YSKKLRQNYRAFKLGIVSFPMYFPGFA------------FYECIKG-RKHIRKVIEDIYQ 240
+ LR +F+ S + F+ ++ ++G I K +E +
Sbjct: 176 FLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L FA ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 49/274 (17%)
Query: 29 NGKLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTD 86
GKLPP + +PI+G IQF +P + KR + G +F NI G++V + D
Sbjct: 1 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQEC----KRQLKSG-IFTINIVGKRVTIVGD 55
Query: 87 PVTNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQ 144
P + N+ L + +FG + + + + + L L LT + Q
Sbjct: 56 PHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--Q 113
Query: 145 KFLHEIDQTTRAHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYR 203
F+ I R + + W G +N+ + C+ MI + + L D K R + R
Sbjct: 114 NFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRK-----RLDAR 168
Query: 204 AFKLGIVSF-PMYFPGFAFY------------ECIKGRKHIRKVIEDIYQERKATKVPGH 250
F + P F C + R ++K++ +I RK
Sbjct: 169 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKE------ 222
Query: 251 DFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAF 284
EEV K DS+ DLL LL A +
Sbjct: 223 -------EEVNK------DSSTSDLLSGLLSAVY 243
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 49/274 (17%)
Query: 29 NGKLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTD 86
GKLPP + +PI+G IQF +P + KR + G +F NI G++V + D
Sbjct: 2 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQEC----KRQLKSG-IFTINIVGKRVTIVGD 56
Query: 87 PVTNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQ 144
P + N+ L + +FG + + + + + L L LT + Q
Sbjct: 57 PHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--Q 114
Query: 145 KFLHEIDQTTRAHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYR 203
F+ I R + + W G +N+ + C+ MI + + L D K R + R
Sbjct: 115 NFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRK-----RLDAR 169
Query: 204 AFKLGIVSF-PMYFPGFAFY------------ECIKGRKHIRKVIEDIYQERKATKVPGH 250
F + P F C + R ++K++ +I RK
Sbjct: 170 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKE------ 223
Query: 251 DFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAF 284
EEV K DS+ DLL LL A +
Sbjct: 224 -------EEVNK------DSSTSDLLSGLLSAVY 244
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 111/312 (35%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGR 139
D V + E ++ W G +F N G K LR +
Sbjct: 63 DAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRD 115
Query: 140 EILRQKFLHEIDQTTRAHLHSWASSPGTVNV------RDACAEMIFESCAKKLISYDESK 193
+ ++ + E Q L G N+ + +I Y + +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 194 YSKKLRQNYRAFKLGIVSFPMYFPGFA------------FYECIKG-RKHIRKVIEDIYQ 240
+ LR F+ S + F+ ++C++G I K +E +
Sbjct: 176 FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 105/273 (38%), Gaps = 49/273 (17%)
Query: 30 GKLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDP 87
GKLPP + +PI+G IQF +P + KR + G +F NI G++V + DP
Sbjct: 1 GKLPPVYPVTVPILGHIIQFGKSPLGFMQEC----KRQLKSG-IFTINIVGKRVTIVGDP 55
Query: 88 VTNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQK 145
+ N+ L + +FG + + + + + L L LT + Q
Sbjct: 56 HEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--QN 113
Query: 146 FLHEIDQTTRAHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYRA 204
F+ I R + + W G +N+ + C+ MI + + L D K R + R
Sbjct: 114 FVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRK-----RLDARR 168
Query: 205 FKLGIVSF-PMYFPGFAFY------------ECIKGRKHIRKVIEDIYQERKATKVPGHD 251
F + P F C + R ++K++ +I RK
Sbjct: 169 FAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKE------- 221
Query: 252 FLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAF 284
EEV K DS+ DLL LL A +
Sbjct: 222 ------EEVNK------DSSTSDLLSGLLSAVY 242
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 49/274 (17%)
Query: 29 NGKLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTD 86
GKLPP + +PI+G IQF +P + KR + G +F NI G++V + D
Sbjct: 1 KGKLPPVYPVTVPILGHIIQFGKSPLGFMQEC----KRQLKSG-IFTINIVGKRVTIVGD 55
Query: 87 PVTNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQ 144
P + N+ L + +FG + + + + + L L LT + Q
Sbjct: 56 PHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--Q 113
Query: 145 KFLHEIDQTTRAHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYR 203
F+ I R + + W G +N+ + C+ MI + + L D K R + R
Sbjct: 114 NFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRK-----RLDAR 168
Query: 204 AFKLGIVSF-PMYFPGFAFY------------ECIKGRKHIRKVIEDIYQERKATKVPGH 250
F + P F C + R ++K++ +I RK
Sbjct: 169 RFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKE------ 222
Query: 251 DFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAF 284
EEV K DS+ DLL LL A +
Sbjct: 223 -------EEVNK------DSSTSDLLSGLLSAVY 243
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 113/311 (36%), Gaps = 47/311 (15%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVT 89
GKLPPG LPIIG Q L + R+G VF + Q+++V +
Sbjct: 9 GKLPPGPFPLPIIGNLFQL----ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVV----MH 60
Query: 90 NYSIMNTENKSLLFWCTDGLS--------HIFGNQNFLSQHGSVHKYLRSLVLHLTGREI 141
Y + K L D S H ++ + +G K +R L T R
Sbjct: 61 GYKAV----KEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSL-TTLRNY 115
Query: 142 LRQKFLHEIDQTTRAH-----LHSWASSPGTVNVRDACA--EMIFESCAKKLISYDESKY 194
K +E AH L P CA +I + +K Y++ K+
Sbjct: 116 GMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKF 175
Query: 195 SKKL---RQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGH- 250
+ + +N+ + FP F Y RK I+ V E +E + +V H
Sbjct: 176 LRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAE--VKEYVSERVKEHH 233
Query: 251 ---------DFLDRVLEEVEKENAVLNDSNAIDLLFV----LLFAAFETVSQSITLITKY 297
D D +L E+EKE +D + V L FA ET S ++
Sbjct: 234 QSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLI 293
Query: 298 LTDHPQVLAEL 308
L +P++ +L
Sbjct: 294 LMKYPEIEEKL 304
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 39/267 (14%)
Query: 31 KLPPG-SMGLPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPV 88
K PP + +P +G +QF P + KR + G VF +I GQ+V + DP
Sbjct: 1 KTPPVYPVTVPFLGHIVQFGKNPLEFMQRC----KRDLKSG-VFTISIGGQRVTIVGDPH 55
Query: 89 TNYSIMNTENKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQKF 146
+ + N+ L ++ +FG + + + + + L L LT + Q F
Sbjct: 56 EHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--QNF 113
Query: 147 LHEIDQTTRAHL-HSWASSPGTVNVRDACAEMIFESCAKKLISYDESK------YSKKLR 199
+ I R + +W G +N+ + C MI + + L D K +++ L
Sbjct: 114 VPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLS 173
Query: 200 QNYRAFKLGIVSFP--MYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVL 257
+ + V P + P C + R ++K++ +I R
Sbjct: 174 KMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAR--------------- 218
Query: 258 EEVEKENAVLNDSNAIDLLFVLLFAAF 284
EKE A D+N DLL LL A +
Sbjct: 219 ---EKEEAS-KDNNTSDLLGGLLKAVY 241
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 57 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 114
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE K R
Sbjct: 115 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE-----KYRGE 166
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
+ + I+ + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 167 FGRWSSEIL---VMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALIRVQD 220
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FET I + T L HP LA
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLA 265
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 38/258 (14%)
Query: 39 LPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSIMNTE 97
+P +G +QF P + KR + G VF +I GQ+V + DP + +
Sbjct: 25 VPFLGHIVQFGKNPLEFMQRC----KRDLKSG-VFTISIGGQRVTIVGDPHEHSRFFSPR 79
Query: 98 NKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQKFLHEIDQTTR 155
N+ L ++ +FG + + + + + L L LT + Q F+ I R
Sbjct: 80 NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--QNFVPAIQHEVR 137
Query: 156 AHL-HSWASSPGTVNVRDACAEMIFESCAKKLISYDESK------YSKKLRQNYRAFKLG 208
+ +W G +N+ + C MI + + L D K +++ L + +
Sbjct: 138 KFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPA 197
Query: 209 IVSFP--MYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENAV 266
V P + P C + R ++K++ +I R EKE A
Sbjct: 198 AVFMPWLLRLPLPQSARCREARAELQKILGEIIVAR------------------EKEEAS 239
Query: 267 LNDSNAIDLLFVLLFAAF 284
D+N DLL LL A +
Sbjct: 240 -KDNNTSDLLGGLLKAVY 256
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 110/294 (37%), Gaps = 20/294 (6%)
Query: 25 NPKCNGKLPPGSMGL---PIIGETIQFFT-PYSLYETQPFIKKRMARYGSVFRTNIAGQK 80
NP+ PG+ L P+ G + + L ++ +G V R + +
Sbjct: 7 NPETRAPAAPGAPELREPPVAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGPKT 66
Query: 81 VIVSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGRE 140
V T+P ++ + + + L + G + + +G +H+ R + +
Sbjct: 67 VYAVTNPELTGALALNPDYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLD 126
Query: 141 ILRQKFLHEIDQTTRAHLHSWASSPG-TVNVRDACAEMIFESCAKKLIS---YDESK--- 193
+ + +++ A W PG TV+ + A+ L+ DE
Sbjct: 127 AI-PAYGPIMEEEAHALTERW--QPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERL 183
Query: 194 ---YSKKLRQNYRAFKLGIVSFPMY-FPGFAFYECIKGRKHIRKVIEDIYQERKATKVPG 249
+ R YR ++ + P+Y P A + ++++I ER+A+
Sbjct: 184 CVALATVFRGMYR--RMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKP 241
Query: 250 HDFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQ 303
D L +LE + + + D + +L ET++ +I + + L DHP+
Sbjct: 242 DDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPE 295
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 110/312 (35%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGR 139
D V + E ++ W G +F N G K LR +
Sbjct: 63 DAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRD 115
Query: 140 EILRQKFLHEIDQTTRAHLHSWASSPGTVNV------RDACAEMIFESCAKKLISYDESK 193
+ ++ + E Q L G N+ + +I Y + +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 194 YSKKLRQNYRAFKLGIVSFPMYFPGFA------------FYECIKG-RKHIRKVIEDIYQ 240
+ LR F+ S + F+ ++ ++G I K +E +
Sbjct: 176 FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 115/310 (37%), Gaps = 44/310 (14%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--STDP 87
GKLPPG LPIIG +Q F K YG VF ++V +
Sbjct: 9 GKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKV----YGPVFTVYFGMNPIVVFHGYEA 64
Query: 88 VTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGREI 141
V I N E N + T GL +S +G K +R L T R
Sbjct: 65 VKEALIDNGEEFSGRGNSPISQRITKGLG-------IISSNGKRWKEIRRFSL-TTLRNF 116
Query: 142 LRQKFLHEIDQTTRAH-----LHSWASSPGTVNVRDACA--EMIFESCAKKLISYDESKY 194
K E AH L +SP CA +I +K Y + +
Sbjct: 117 GMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNF 176
Query: 195 ---SKKLRQNYRAFKLGIV----SFPMY---FPGFAFYECIKGRKHIRKVIEDIYQERKA 244
K+ +N+R + +FP+ FPG + +K R I + +E +A
Sbjct: 177 LTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPG-THNKVLKNVALTRSYIREKVKEHQA 235
Query: 245 TKVPGH--DFLDRVLEEVEKE----NAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYL 298
+ + DF+D L ++E+E + N N + + L A ET S ++ L
Sbjct: 236 SLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLL 295
Query: 299 TDHPQVLAEL 308
HP+V A++
Sbjct: 296 LKHPEVTAKV 305
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 110/312 (35%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGR 139
D V + E ++ W G +F N G K LR +
Sbjct: 63 DAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRD 115
Query: 140 EILRQKFLHEIDQTTRAHLHSWASSPGTVNV------RDACAEMIFESCAKKLISYDESK 193
+ ++ + E Q L G N+ + +I Y + +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 194 YSKKLRQNYRAFKLGIVSFPMYFPGFA------------FYECIKG-RKHIRKVIEDIYQ 240
+ LR F+ S + F+ ++ ++G I K +E +
Sbjct: 176 FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 110/312 (35%), Gaps = 44/312 (14%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP IG +Q T +Y + + K RYG VF ++ ++V+V
Sbjct: 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNS---LMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 86 DPVTNYSIMNTE------NKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLHLTGR 139
D V + E ++ W G +F N G K LR +
Sbjct: 63 DAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSN-------GERAKQLRRFSIATLRD 115
Query: 140 EILRQKFLHEIDQTTRAHLHSWASSPGTVNV------RDACAEMIFESCAKKLISYDESK 193
+ ++ + E Q L G N+ + +I Y + +
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 194 YSKKLRQNYRAFKLGIVSFPMYFPGFA------------FYECIKG-RKHIRKVIEDIYQ 240
+ LR F+ S + F+ ++ ++G I K +E +
Sbjct: 176 FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVE--HN 233
Query: 241 ERKATKVPGHDFLD----RVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
+R DF+D R+ EE + N N + L ETVS ++
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFL 293
Query: 297 YLTDHPQVLAEL 308
L HP+V A++
Sbjct: 294 LLMKHPEVEAKV 305
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 56 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 113
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE K R
Sbjct: 114 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE-----KYRGE 165
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
+ + I+ + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 166 FGRWSSEIL---VMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALIRVQD 219
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FE+ I + T L HP LA
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA 264
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 57 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 114
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE K R
Sbjct: 115 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE-----KYRGE 166
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
+ + I+ + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 167 FGRWSSEIL---VMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALIRVQD 220
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FE+ I + T L HP LA
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLA 265
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 99/262 (37%), Gaps = 23/262 (8%)
Query: 67 RYGSVFRTNIAGQKVIVSTDP--VTNYSIMNTENKSLLFWCTDGLSHIFG----NQNFLS 120
+YG V R N+ + ++ T P V + + NK + L +FG Q +S
Sbjct: 22 KYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMY--RALQTVFGERLFGQGLVS 79
Query: 121 Q--HGSVHKYLRSLVLHLTGREI--LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAE 176
+ + HK R + L + + L + F + +Q L + A V+++D
Sbjct: 80 ECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEI-LEAKADGQTPVSMQDMLTY 138
Query: 177 MIFESCAKKLISYDESKY---SKKLRQNYRAFKLGIVS----FPMYFPG--FAFYECIKG 227
+ AK + S K L Q + GI + + PG E +
Sbjct: 139 TAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRES 198
Query: 228 RKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEK-ENAVLNDSNAIDLLFVLLFAAFET 286
+ +R+V D Q R+ G + +L ++ K E +D +D A ET
Sbjct: 199 IRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHET 258
Query: 287 VSQSITLITKYLTDHPQVLAEL 308
+ + L+ P+++A L
Sbjct: 259 SANHLAFTVMELSRQPEIVARL 280
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 48/263 (18%)
Query: 39 LPIIGETIQFF-TPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSIMNTE 97
+PI+G IQF +P + KR + G +F NI G++V + DP +
Sbjct: 25 VPILGHIIQFGKSPLGFMQEC----KRQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPR 79
Query: 98 NKSL-LFWCTDGLSHIFGNQ-NFLSQHGSVHKYLRSLVLHLTGREILRQKFLHEIDQTTR 155
N+ L + +FG + + + + + L L LT + Q F+ I R
Sbjct: 80 NEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKF--QNFVPAIQHEVR 137
Query: 156 AHLHS-WASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQNYRAFKLGIVSF-P 213
+ + W G +N+ + C+ MI + + L D K R + R F +
Sbjct: 138 KFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRK-----RLDARRFAQLLAKMES 192
Query: 214 MYFPGFAFY------------ECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
P F C + R ++K++ +I RK EEV
Sbjct: 193 SLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKE-------------EEVN 239
Query: 262 KENAVLNDSNAIDLLFVLLFAAF 284
K DS+ DLL LL A +
Sbjct: 240 K------DSSTSDLLSGLLSAVY 256
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 57 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 114
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE K R
Sbjct: 115 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE-----KYRGE 166
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
+ + I+ + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 167 FGRWSSEIL---VMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALIRVQD 220
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FE I + T L HP LA
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 265
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 56 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 113
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE K R
Sbjct: 114 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE-----KYRGE 165
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
+ + I+ + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 166 FGRWSSEIL---VMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALIRVQD 219
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FE I + T L HP LA
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 264
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 230 HIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQ 289
+R I+D+ +++ PG D R + +++ L+ + + L F+LL A ET +
Sbjct: 196 ELRAYIDDLITRKESE--PGDDLFSRQIAR-QRQEGTLDHAGLVSLAFLLLTAGHETTAN 252
Query: 290 SITLITKYLTDHPQVL 305
I+L L HP+ L
Sbjct: 253 MISLGVVGLLSHPEQL 268
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 83 VSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSLVLH-LTGREI 141
+S+DP Y + E + L + D + + F N + H LR LV T R +
Sbjct: 56 LSSDPKKKYPGVEVEFPAYLGFPED-VRNYFAT-NMGTSDPPTHTRLRKLVSQEFTVRRV 113
Query: 142 LRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCAKKLISYDESKYSKKLRQN 201
+ ++Q T A L G V++ D A + +L+ DE+
Sbjct: 114 --EAMRPRVEQIT-AELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEAARG------ 164
Query: 202 YRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATKVPGHDFLDRVLEEVE 261
AF + P A R+ + +++ + ER+ T+ PG D L ++ +
Sbjct: 165 --AFGRWSSEILVMDPERAEQRGQAAREVVNFILDLV--ERRRTE-PGDDLLSALISVQD 219
Query: 262 KENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
++ L+ + VLL A FE I + T L HP LA
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 264
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 117/304 (38%), Gaps = 40/304 (13%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--STDP 87
GKLPPG LP++G +Q L + F++ R +YG VF + + V+V TD
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFLRLR-EKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 88 VTNYSIMNTENKSLLFWCTDG----LSHIFGNQNFLSQHGSVHKYLRSLVLHLTGREILR 143
+ + E + G + IF + +G + LR L +
Sbjct: 65 IREALVDQAEA-----FSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMG 119
Query: 144 QKFLHE-IDQTTRAHLHSWASSPG-----TVNVRDACAEMIFESCAKKLISYDESKYSKK 197
++ + E I + R + S G T+ + +I K Y + + +
Sbjct: 120 KRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRL 179
Query: 198 L-----------RQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKATK 246
L + + F+L F YFPG + + + I I ++ +AT
Sbjct: 180 LDLFFQSFSLISSFSSQVFEL-FSGFLKYFPG-THRQIYRNLQEINTFIGQSVEKHRATL 237
Query: 247 VPGH--DFLDRVLEEVEKE----NAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTD 300
P + DF+D L +EK+ ++ + N I + L FA ET S ++ +
Sbjct: 238 DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLK 297
Query: 301 HPQV 304
+P V
Sbjct: 298 YPHV 301
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP++G +Q L + F++ R +YG VF + + V+V T
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGLL---RSFLRLR-EKYGDVFTVYLGSRPVVVLCGT 62
Query: 86 DPVTNYSIMNTENKSLLFWCTDG----LSHIFGNQNFLSQHGSVHKYLRSLVLHLTGREI 141
D + + E + G + IF + +G + LR L
Sbjct: 63 DAIREALVDQAEA-----FSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFG 117
Query: 142 LRQKFLHE-IDQTTRAHLHSWASSPG-----TVNVRDACAEMIFESCAKKLISYDESKYS 195
+ ++ + E I + R + S G T+ + +I K Y + +
Sbjct: 118 MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL 177
Query: 196 KKL-----------RQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKA 244
+ L + + F+L F YFPG + + + I I ++ +A
Sbjct: 178 RLLDLFFQSFSLISSFSSQVFEL-FSGFLKYFPG-THRQIYRNLQEINTFIGQSVEKHRA 235
Query: 245 TKVPGH--DFLDRVLEEVEKE----NAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYL 298
T P + DF+D L +EK+ ++ + N I + L FA ET S ++ +
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 299 TDHPQV 304
+P V
Sbjct: 296 LKYPHV 301
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP++G +Q L + F++ R +YG VF + + V+V T
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGLL---RSFLRLR-EKYGDVFTVYLGSRPVVVLCGT 62
Query: 86 DPVTNYSIMNTENKSLLFWCTDG----LSHIFGNQNFLSQHGSVHKYLRSLVLHLTGREI 141
D + + E + G + IF + +G + LR L
Sbjct: 63 DAIREALVDQAEA-----FSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFG 117
Query: 142 LRQKFLHE-IDQTTRAHLHSWASSPG-----TVNVRDACAEMIFESCAKKLISYDESKYS 195
+ ++ + E I + R + S G T+ + +I K Y + +
Sbjct: 118 MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL 177
Query: 196 KKL-----------RQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKA 244
+ L + + F+L F YFPG + + + I I ++ +A
Sbjct: 178 RLLDLFFQSFSLISSFSSQVFEL-FSGFLKYFPG-THRQIYRNLQEINTFIGQSVEKHRA 235
Query: 245 TKVPGH--DFLDRVLEEVEKE----NAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYL 298
T P + DF+D L +EK+ ++ + N I + L FA ET S ++ +
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 299 TDHPQV 304
+P V
Sbjct: 296 LKYPHV 301
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 119/316 (37%), Gaps = 56/316 (17%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTD-PV 88
GKLPPG LP+IG +Q + + + YG VF ++++V V
Sbjct: 10 GKLPPGPTPLPVIGNILQI----DIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEV 65
Query: 89 TNYSIMNTENK-------SLLFWCTDGLSHIFGNQNFLSQHGSVHKYLRSL-VLHLTGRE 140
++++ + L G +F N G K +R ++ L
Sbjct: 66 VKEALIDLGEEFSGRGHFPLAERANRGFGIVFSN-------GKRWKEIRRFSLMTLRNFG 118
Query: 141 ILRQKFLHEIDQTTRA---HLHSWASSPGTVNVRDACA--EMIFESCAKKLISYDESKY- 194
+ ++ + + R L +SP CA +I +K Y + ++
Sbjct: 119 MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFL 178
Query: 195 --SKKLRQNYRAFKLGIV----SFPM---YFPG--------FAFYECIKGRKHIRKVIED 237
+KL +N R + +FP YFPG AF E ++E
Sbjct: 179 NLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMES--------DILEK 230
Query: 238 IYQERKATKVPG-HDFLDRVLEEVEKENAVLNDSNAIDLLFV----LLFAAFETVSQSIT 292
+ + +++ + DF+D L ++EKE I+ L + LL A ET S ++
Sbjct: 231 VKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLR 290
Query: 293 LITKYLTDHPQVLAEL 308
L HP+V A++
Sbjct: 291 YALLLLLKHPEVTAKV 306
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 28 CNGKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV--ST 85
GKLPPG LP++G +Q L + F++ R +YG VF + + V+V T
Sbjct: 7 SKGKLPPGPSPLPVLGNLLQMDRKGLL---RSFLRLR-EKYGDVFTVYLGSRPVVVLCGT 62
Query: 86 DPVTNYSIMNTENKSLLFWCTDG----LSHIFGNQNFLSQHGSVHKYLRSLVLHLTGREI 141
D + + E + G + IF + +G + LR L
Sbjct: 63 DAIREALVDQAEA-----FSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFG 117
Query: 142 LRQKFLHE-IDQTTRAHLHSWASSPG-----TVNVRDACAEMIFESCAKKLISYDESKYS 195
+ ++ + E I + R + S G T+ + +I K Y + +
Sbjct: 118 MGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFL 177
Query: 196 KKL-----------RQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIEDIYQERKA 244
+ L + + F+L F +FPG + + + I I ++ +A
Sbjct: 178 RLLDLFFQSFSLISSFSSQVFEL-FSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRA 235
Query: 245 TKVPGH--DFLDRVLEEVEKE----NAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYL 298
T P + DF+D L +EK+ ++ + N I + L FA ET S ++ +
Sbjct: 236 TLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 299 TDHPQV 304
+P V
Sbjct: 296 LKYPHV 301
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L ++L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVLAELTVCAT 313
S ++ +L +P VL ++ AT
Sbjct: 270 SGLLSFALYFLVKNPHVLQKVAEEAT 295
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 119/304 (39%), Gaps = 40/304 (13%)
Query: 34 PGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSI 93
PG LP +G + + + +++ + +YG V+ Q V+ TDP ++
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFDME-----CHKKYGKVWGFYDGQQPVLAITDPDMIKTV 73
Query: 94 MNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVH-----KYLRSLV--LHLTGREILRQKF 146
+ E S+ T+ FG F+ S+ K LRSL+ +G+
Sbjct: 74 LVKECYSVF---TN--RRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 128
Query: 147 LHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFE-----SCAKKLISYDESK------YS 195
+ + +L A + V ++D + S + S + +
Sbjct: 129 IAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 188
Query: 196 KKLRQNY-RAFKLGIVSFPMYFPGFAFYE-CIKGRK---HIRKVIEDIYQER-KATKVPG 249
K LR ++ F L I FP P C+ R+ +RK ++ + + R + T+
Sbjct: 189 KLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR 248
Query: 250 HDFLDRVLE-----EVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQV 304
DFL +++ E E A L+D + + +FA +ET S ++ I L HP V
Sbjct: 249 VDFLQLMIDSQNSKETESHKA-LSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 307
Query: 305 LAEL 308
+L
Sbjct: 308 QQKL 311
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 119/304 (39%), Gaps = 40/304 (13%)
Query: 34 PGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSI 93
PG LP +G + + + +++ + +YG V+ Q V+ TDP ++
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFDME-----CHKKYGKVWGFYDGQQPVLAITDPDMIKTV 72
Query: 94 MNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVH-----KYLRSLV--LHLTGREILRQKF 146
+ E S+ T+ FG F+ S+ K LRSL+ +G+
Sbjct: 73 LVKECYSVF---TN--RRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 127
Query: 147 LHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFE-----SCAKKLISYDESK------YS 195
+ + +L A + V ++D + S + S + +
Sbjct: 128 IAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 187
Query: 196 KKLRQNY-RAFKLGIVSFPMYFPGFAFYE-CIKGRK---HIRKVIEDIYQER-KATKVPG 249
K LR ++ F L I FP P C+ R+ +RK ++ + + R + T+
Sbjct: 188 KLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR 247
Query: 250 HDFLDRVLE-----EVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQV 304
DFL +++ E E A L+D + + +FA +ET S ++ I L HP V
Sbjct: 248 VDFLQLMIDSQNSKETESHKA-LSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 306
Query: 305 LAEL 308
+L
Sbjct: 307 QQKL 310
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 119/304 (39%), Gaps = 40/304 (13%)
Query: 34 PGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSI 93
PG LP +G + + + +++ + +YG V+ Q V+ TDP ++
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFDME-----CHKKYGKVWGFYDGQQPVLAITDPDMIKTV 71
Query: 94 MNTENKSLLFWCTDGLSHIFGNQNFLSQHGSVH-----KYLRSLV--LHLTGREILRQKF 146
+ E S+ T+ FG F+ S+ K LRSL+ +G+
Sbjct: 72 LVKECYSVF---TN--RRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPI 126
Query: 147 LHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFE-----SCAKKLISYDESK------YS 195
+ + +L A + V ++D + S + S + +
Sbjct: 127 IAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTK 186
Query: 196 KKLRQNY-RAFKLGIVSFPMYFPGFAFYE-CIKGRK---HIRKVIEDIYQER-KATKVPG 249
K LR ++ F L I FP P C+ R+ +RK ++ + + R + T+
Sbjct: 187 KLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR 246
Query: 250 HDFLDRVLE-----EVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQV 304
DFL +++ E E A L+D + + +FA +ET S ++ I L HP V
Sbjct: 247 VDFLQLMIDSQNSKETESHKA-LSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 305
Query: 305 LAEL 308
+L
Sbjct: 306 QQKL 309
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex
With Anti- Platelet Drug Clopidogrel
Length = 479
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV 83
GKLPPG LP++G +Q L + F++ R +YG VF + + V+V
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFLRLR-EKYGDVFTVYLGSRPVVV 58
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 235 IEDIYQERKATKVPGH--DFLDRVLEEV------EKENAVLNDSNAIDLLFVLLFAAFET 286
++ + +E T GH D D ++E E N L+D I+++ L A F+T
Sbjct: 235 MQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDT 294
Query: 287 VSQSITLITKYLTDHPQV 304
V+ +I+ YL +P+V
Sbjct: 295 VTTAISWSLMYLVMNPRV 312
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 206 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 307 EL 308
+L
Sbjct: 264 QL 265
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRV-LEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 206 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 307 EL 308
+L
Sbjct: 264 QL 265
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRV-LEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 206 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 307 EL 308
+L
Sbjct: 264 QL 265
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRV-LEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 206 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 263
Query: 307 EL 308
+L
Sbjct: 264 QL 265
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRV-LEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 207 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 264
Query: 307 EL 308
+L
Sbjct: 265 QL 266
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A T+ I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 173 ACAEMIFESCAKKLISYDESKYSK--KLRQNYRAFKLGIVSFPMYFPGFAFYECIKGRKH 230
+C + + A K + D S + K R+N+ +L + P AFY K R
Sbjct: 277 SCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGD 336
Query: 231 IRKVIEDIYQERKATKVPGHDFL 253
K E + +E+K VPG FL
Sbjct: 337 DVKFCERLLEEKKVALVPGSAFL 359
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 11/248 (4%)
Query: 68 YGSVFRTNIAGQKVIVSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQN--FLSQHGSV 125
YG R I+G++ ++ + + + IM + S F GL I ++ + + +
Sbjct: 81 YGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMHEKGIIFNNNPEL 140
Query: 126 HKYLRSLVLH-LTGREILRQ-KFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCA 183
K R + L+G ++R E +T L + G V+V ++ ++
Sbjct: 141 WKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSN 200
Query: 184 KKL--ISYDESKYSKKLRQNYRAFKLGIVSFPMYFP-GFAFYECIKGRKHIRKVIEDIYQ 240
I DES K++ + A++ ++ ++F + + + K K ++ IE +
Sbjct: 201 TLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIA 260
Query: 241 ERK---ATKVPGHDFLDRVLEEVEKEN-AVLNDSNAIDLLFVLLFAAFETVSQSITLITK 296
E++ +T+ + +D E + E L N + +L AA +T+S S+ +
Sbjct: 261 EKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLF 320
Query: 297 YLTDHPQV 304
+ HP V
Sbjct: 321 LIAKHPNV 328
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 288 SQSITLITKYLTDHPQVL 305
S +T +L +P VL
Sbjct: 271 SGLLTFALYFLVKNPHVL 288
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A + I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 272
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 273 SGLLSFALYFLVKNPHVL 290
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A + I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNAVMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 271 SGLLSFALYFLVKNPHVL 288
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 248 PGHDFLDRVL-EEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLA 306
P D + ++ E+V+ N ++ S+A+ + F+LL A + I L L HP LA
Sbjct: 205 PKDDIISKLCTEQVKPGN--IDKSDAVQIAFLLLVAGNANMVNMIALGVATLAQHPDQLA 262
Query: 307 EL 308
+L
Sbjct: 263 QL 264
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 271 SGLLSFALYFLVKNPHVL 288
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 271 SGLLSFALYFLVKNPHVL 288
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 270
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 271 SGLLSFALYFLVKNPHVL 288
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 272
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 273 SGLLSFALYFLVKNPHVL 290
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 213 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 272
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 273 SGLLSFALYFLVKNPHVL 290
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 15/65 (23%)
Query: 16 ISHWVYTWANPKCNGKLPPGSMGLPIIGETIQFFT--PYSLYETQPFIKKRMARYGSVFR 73
+S WV +WAN PG G+P G+ ++T S ETQP K+ G V R
Sbjct: 143 LSDWVSSWAN-------KPGEGGIP--GDVFDYYTINAKSFPETQPIRVKK----GDVIR 189
Query: 74 TNIAG 78
+ G
Sbjct: 190 LRLIG 194
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 216 KVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETT 275
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 276 SGLLSFTLYFLVKNPHVL 293
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 241 ERKATKVPGHDFLDR-VLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLT 299
ER+A PG D + R VL EV+ L+D A + LL A T + + I + L
Sbjct: 223 ERRAD--PGDDLISRLVLAEVDGR--ALDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 278
Query: 300 DHP 302
+HP
Sbjct: 279 EHP 281
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 30 GKLPPGSMGLPIIGETIQ 47
GKLPPG LP+IG +Q
Sbjct: 10 GKLPPGPTPLPVIGNILQ 27
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 241 ERKATKVPGHDFLDR-VLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLT 299
ER+A PG D + R VL EV+ L+D A + LL A T + + I + L
Sbjct: 203 ERRAD--PGDDLISRLVLAEVDGR--ALDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 258
Query: 300 DHP 302
+HP
Sbjct: 259 EHP 261
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 30 GKLPPGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGSVFRTNIAGQKVIV 83
GKLPPG PIIG +Q + + K YG VF + + +V
Sbjct: 9 GKLPPGPTPFPIIGNILQI----DAKDISKSLTKFSECYGPVFTVYLGMKPTVV 58
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 34 PGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGS-VFRTNIAGQKVIVSTDPVTNYS 92
PG+ GLPI+G + + + F K R+ +Y S V+R N+ I V +
Sbjct: 31 PGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVV--A 88
Query: 93 IMNTENKSLLF 103
+++ ++ +LF
Sbjct: 89 LLDGKSFPVLF 99
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 34 PGSMGLPIIGETIQFFTPYSLYETQPFIKKRMARYGS-VFRTNIAGQKVIVSTDPVTNYS 92
PG+ GLPI+G + + + F K R+ +Y S V+R N+ I V +
Sbjct: 31 PGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVV--A 88
Query: 93 IMNTENKSLLF 103
+++ ++ +LF
Sbjct: 89 LLDGKSFPVLF 99
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEST 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEST 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEST 270
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 271 SGLLSFALYFLVKNPHVL 288
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1OCS|A Chain A, Crystal Structure Of The Yeast Px-Doamin Protein Grd19p
(Sorting Nexin3) Complexed To
Phosphatidylinosytol-3-Phosphate.
pdb|1OCU|A Chain A, Crystal Structure Of The Yeast Px-Domain Protein Grd19p
(Sorting Nexin 3) Complexed To
Phosphatidylinosytol-3-Phospahte.
pdb|1OCU|B Chain B, Crystal Structure Of The Yeast Px-Domain Protein Grd19p
(Sorting Nexin 3) Complexed To
Phosphatidylinosytol-3-Phospahte
Length = 162
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 124 SVHKYLRSLVLHLTGREILRQKFLHEIDQTTRAHLHSWASSPGTVNVRDACAEMIFESCA 183
S+ + + +V HL G+ +L +F +E+ + R L++W S + +S +
Sbjct: 97 SMLNHPKVMVPHLPGKILLSNRFSNEVIEERRQGLNTWMQS--------VAGHPLLQSGS 148
Query: 184 KKLISYDESK 193
K L+ + E++
Sbjct: 149 KVLVRFIEAE 158
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEAT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEAT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L A E
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEAT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|1A8Y|A Chain A, Crystal Structure Of Calsequestrin From Rabbit Skeletal
Muscle Sarcoplasmic Reticulum At 2.4 A Resolution
pdb|3US3|A Chain A, Recombinant Rabbit Skeletal Calsequestrin-Mpd Complex
pdb|3V1W|A Chain A, Molecular Basis For Multiple Ligand Binding Of
Calsequestrin And Potential Inhibition By Caffeine And
Gallocatecin
Length = 367
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 185 KLISYDESKYSKKLRQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIE-DIYQ 240
KLI Y + K ++Y+AFK F Y P FA ++ +K K+ E D Y+
Sbjct: 147 KLIGY----FKNKDSEHYKAFKEAAEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYE 199
>pdb|3TRQ|A Chain A, Crystal Structure Of Native Rabbit Skeletal Calsequestrin
pdb|3TRP|A Chain A, Crystal Structure Of Recombinant Rabbit Skeletal
Calsequestrin
Length = 353
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 185 KLISYDESKYSKKLRQNYRAFKLGIVSFPMYFPGFAFYECIKGRKHIRKVIE-DIYQ 240
KLI Y + K ++Y+AFK F Y P FA ++ +K K+ E D Y+
Sbjct: 147 KLIGY----FKNKDSEHYKAFKEAAEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYE 199
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 27.7 bits (60), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 229 KHIRKVIEDIYQERKATKVPGHDFLDRVLEEVEKENA-VLNDSNAIDLLFVLLFAAFETV 287
K + +++ I +RKA+ D L +L + E L+D N + L ET
Sbjct: 210 KVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETT 269
Query: 288 SQSITLITKYLTDHPQVL 305
S ++ +L +P VL
Sbjct: 270 SGLLSFALYFLVKNPHVL 287
>pdb|3OJP|A Chain A, D52n Mutant Of Hen Egg White Lysozyme (Hewl)
Length = 129
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 72 FRTNIAGQKVIVSTDPVTNYSIMNTENKSLLFWCTDG 108
F +N Q +TD TNY I+ ++ +WC DG
Sbjct: 34 FESNFNTQATNRNTDGSTNYGILQINSR---WWCNDG 67
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 60 FIKKRMARYGSVFRTNIAGQKVIVSTDPVTNYSIMNTENKSLLFWCTDGLSHIFGNQNFL 119
F++ + + V RTN+ + T P++ I N + + GL+ G N+
Sbjct: 137 FLRMKNDEWEDVLRTNL--NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS 194
Query: 120 SQHGSVHKYLRSLVLHLTGREI 141
S V + +SL L R I
Sbjct: 195 SSKAGVIGFTKSLAKELASRNI 216
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 249 GHDFLDRVLEEVEKENAVLNDSNAIDLLFVLLFAAFETVSQSITLITKYLTDHPQVLAEL 308
G D + R+L VE + + D A+ L+ +LL +TV + + YL+ HP+ +AE+
Sbjct: 224 GTDLITRILN-VEIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEM 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,073,559
Number of Sequences: 62578
Number of extensions: 356565
Number of successful extensions: 940
Number of sequences better than 100.0: 112
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 892
Number of HSP's gapped (non-prelim): 119
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)