Query 021282
Match_columns 314
No_of_seqs 137 out of 1817
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 09:01:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 2.3E-46 5E-51 307.1 24.0 294 2-313 20-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 2.3E-39 5E-44 277.4 22.3 279 3-313 7-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 2.2E-38 4.8E-43 271.5 24.9 272 3-313 6-289 (295)
4 PRK00870 haloalkane dehalogena 100.0 3.9E-38 8.4E-43 270.8 25.1 127 3-130 18-149 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 2.8E-37 6E-42 270.8 22.8 281 7-312 64-356 (360)
6 TIGR02240 PHA_depoly_arom poly 100.0 1.8E-37 3.9E-42 263.3 18.3 265 4-313 2-266 (276)
7 PRK03204 haloalkane dehalogena 100.0 1.1E-36 2.4E-41 259.3 20.3 273 3-311 13-286 (286)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.1E-34 2.3E-39 247.1 24.1 269 5-312 6-282 (282)
9 PLN02965 Probable pheophorbida 100.0 4.7E-35 1E-39 245.6 18.9 244 29-312 5-252 (255)
10 PLN03087 BODYGUARD 1 domain co 100.0 1.6E-34 3.5E-39 257.1 21.3 126 5-131 177-309 (481)
11 TIGR03056 bchO_mg_che_rel puta 100.0 5.3E-34 1.1E-38 242.1 23.0 271 5-311 7-278 (278)
12 PRK06489 hypothetical protein; 100.0 1.1E-34 2.4E-39 254.7 18.6 120 10-130 46-188 (360)
13 PLN03084 alpha/beta hydrolase 100.0 6.3E-34 1.4E-38 248.7 22.9 121 8-130 109-231 (383)
14 PLN02578 hydrolase 100.0 1.7E-33 3.6E-38 246.7 23.8 118 7-130 69-186 (354)
15 PRK10673 acyl-CoA esterase; Pr 100.0 1.6E-33 3.5E-38 236.4 21.5 250 15-313 2-255 (255)
16 PRK10349 carboxylesterase BioH 100.0 9E-34 1.9E-38 238.1 18.8 252 15-312 3-255 (256)
17 PRK11126 2-succinyl-6-hydroxy- 100.0 8.6E-33 1.9E-37 230.1 21.4 99 27-130 2-101 (242)
18 PRK08775 homoserine O-acetyltr 100.0 2.6E-33 5.7E-38 244.6 15.7 120 5-130 37-172 (343)
19 PRK10749 lysophospholipase L2; 100.0 8.5E-32 1.8E-36 233.7 23.1 125 6-130 33-165 (330)
20 TIGR01250 pro_imino_pep_2 prol 100.0 9.1E-32 2E-36 228.9 20.1 124 7-130 5-130 (288)
21 PRK07581 hypothetical protein; 100.0 2E-32 4.3E-37 239.0 15.9 122 9-130 21-158 (339)
22 PLN02385 hydrolase; alpha/beta 100.0 4.9E-31 1.1E-35 230.9 24.0 121 9-130 67-196 (349)
23 TIGR03611 RutD pyrimidine util 100.0 1.1E-31 2.5E-36 224.8 18.3 256 16-312 1-257 (257)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.3E-31 7.2E-36 220.7 20.2 250 15-311 1-251 (251)
25 PRK00175 metX homoserine O-ace 100.0 3.3E-31 7.2E-36 233.8 20.0 123 9-131 28-182 (379)
26 PHA02857 monoglyceride lipase; 100.0 1.7E-30 3.7E-35 220.6 23.7 122 8-130 5-131 (276)
27 KOG1454 Predicted hydrolase/ac 100.0 1.7E-31 3.7E-36 228.5 17.1 104 25-128 56-160 (326)
28 TIGR01392 homoserO_Ac_trn homo 100.0 1.9E-31 4.1E-36 233.6 16.7 123 9-131 11-162 (351)
29 PLN02211 methyl indole-3-aceta 100.0 2.7E-30 5.8E-35 218.1 22.4 117 11-130 4-121 (273)
30 KOG4409 Predicted hydrolase/ac 100.0 5.7E-30 1.2E-34 211.2 21.7 129 5-134 66-198 (365)
31 PLN02894 hydrolase, alpha/beta 100.0 1.2E-29 2.6E-34 224.8 22.9 115 15-131 93-211 (402)
32 PLN02298 hydrolase, alpha/beta 100.0 5.3E-30 1.2E-34 223.0 20.0 124 6-130 34-168 (330)
33 TIGR01738 bioH putative pimelo 100.0 6E-30 1.3E-34 212.4 18.6 241 28-310 5-245 (245)
34 PRK14875 acetoin dehydrogenase 100.0 1E-29 2.3E-34 224.8 20.4 260 7-313 112-371 (371)
35 TIGR03695 menH_SHCHC 2-succiny 100.0 9E-30 2E-34 211.7 18.1 103 27-130 1-104 (251)
36 TIGR01249 pro_imino_pep_1 prol 100.0 3.7E-29 7.9E-34 215.2 19.7 127 3-131 3-130 (306)
37 PRK05855 short chain dehydroge 100.0 3.3E-29 7.1E-34 234.3 20.6 123 5-129 4-129 (582)
38 PF12697 Abhydrolase_6: Alpha/ 100.0 2.4E-30 5.2E-35 212.1 10.5 101 30-131 1-101 (228)
39 PLN02980 2-oxoglutarate decarb 100.0 2.5E-28 5.5E-33 246.6 22.8 114 16-130 1360-1479(1655)
40 KOG2984 Predicted hydrolase [G 100.0 1.9E-28 4.1E-33 185.9 14.3 243 6-314 23-277 (277)
41 PLN02652 hydrolase; alpha/beta 100.0 4E-27 8.6E-32 207.3 21.5 117 12-130 119-244 (395)
42 COG2267 PldB Lysophospholipase 100.0 1.4E-26 3.1E-31 196.3 21.9 128 5-132 11-143 (298)
43 PLN02511 hydrolase 99.9 3.3E-26 7.2E-31 202.1 18.1 122 7-130 74-209 (388)
44 KOG2382 Predicted alpha/beta h 99.9 2.5E-25 5.4E-30 183.5 18.5 251 25-314 50-314 (315)
45 PRK06765 homoserine O-acetyltr 99.9 7.1E-25 1.5E-29 192.3 19.9 120 11-130 38-195 (389)
46 TIGR01607 PST-A Plasmodium sub 99.9 1.7E-24 3.6E-29 187.7 19.9 122 9-130 3-184 (332)
47 COG1647 Esterase/lipase [Gener 99.9 2.1E-24 4.6E-29 166.8 14.5 225 27-312 15-243 (243)
48 KOG1455 Lysophospholipase [Lip 99.9 3.6E-24 7.8E-29 173.8 15.5 124 5-129 28-162 (313)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 3.2E-23 6.9E-28 175.2 21.6 116 10-130 8-133 (274)
50 PRK10985 putative hydrolase; P 99.9 5.8E-22 1.2E-26 171.7 21.3 123 8-131 35-168 (324)
51 PRK05077 frsA fermentation/res 99.9 5.4E-22 1.2E-26 176.2 21.4 230 12-313 177-412 (414)
52 TIGR01838 PHA_synth_I poly(R)- 99.9 1.9E-22 4.1E-27 181.7 18.4 107 26-132 187-303 (532)
53 PLN02872 triacylglycerol lipas 99.9 3.8E-22 8.2E-27 175.1 18.3 127 3-130 43-196 (395)
54 PRK10566 esterase; Provisional 99.9 1.6E-21 3.4E-26 163.0 19.8 113 16-128 15-139 (249)
55 KOG2564 Predicted acetyltransf 99.9 8.7E-22 1.9E-26 157.2 16.2 120 9-130 53-181 (343)
56 PRK11071 esterase YqiA; Provis 99.9 2.4E-21 5.1E-26 154.3 17.1 87 28-130 2-92 (190)
57 COG0596 MhpC Predicted hydrola 99.9 1.2E-20 2.7E-25 157.5 21.3 115 10-130 6-122 (282)
58 TIGR01836 PHA_synth_III_C poly 99.9 5.9E-21 1.3E-25 167.2 18.2 116 12-132 46-172 (350)
59 PF00561 Abhydrolase_1: alpha/ 99.9 9.9E-23 2.1E-27 167.8 2.8 76 55-130 1-78 (230)
60 PRK07868 acyl-CoA synthetase; 99.9 2.9E-20 6.3E-25 182.5 18.4 104 25-131 65-177 (994)
61 PRK13604 luxD acyl transferase 99.8 8.4E-20 1.8E-24 152.5 16.0 118 8-129 13-139 (307)
62 TIGR03101 hydr2_PEP hydrolase, 99.8 7.4E-20 1.6E-24 152.0 15.5 121 8-130 4-133 (266)
63 KOG2565 Predicted hydrolases o 99.8 5.1E-19 1.1E-23 146.7 11.8 129 3-132 123-265 (469)
64 PF12695 Abhydrolase_5: Alpha/ 99.8 2.6E-18 5.7E-23 131.3 11.6 93 29-129 1-93 (145)
65 TIGR03230 lipo_lipase lipoprot 99.7 2E-17 4.2E-22 145.4 13.4 103 26-130 40-153 (442)
66 PRK11460 putative hydrolase; P 99.7 8.6E-17 1.9E-21 132.4 16.4 180 25-312 14-211 (232)
67 TIGR02821 fghA_ester_D S-formy 99.7 4.3E-16 9.3E-21 131.9 20.5 121 10-130 21-172 (275)
68 PLN02442 S-formylglutathione h 99.7 1.3E-15 2.8E-20 129.2 18.7 105 26-130 46-177 (283)
69 PF06342 DUF1057: Alpha/beta h 99.7 4.4E-15 9.6E-20 120.3 19.8 113 17-133 24-139 (297)
70 PLN00021 chlorophyllase 99.7 2.4E-15 5.3E-20 128.4 19.0 102 26-129 51-164 (313)
71 KOG4391 Predicted alpha/beta h 99.7 2.9E-16 6.2E-21 121.3 10.9 122 3-129 51-182 (300)
72 KOG4667 Predicted esterase [Li 99.7 1.1E-15 2.5E-20 117.9 13.5 99 27-128 33-136 (269)
73 KOG1552 Predicted alpha/beta h 99.7 1.1E-14 2.4E-19 116.5 18.8 95 27-128 60-160 (258)
74 cd00707 Pancreat_lipase_like P 99.7 2E-16 4.3E-21 133.2 8.6 113 14-130 25-146 (275)
75 KOG2931 Differentiation-relate 99.7 7.5E-14 1.6E-18 113.0 21.4 271 6-311 24-304 (326)
76 COG1506 DAP2 Dipeptidyl aminop 99.6 7.3E-15 1.6E-19 137.4 18.0 226 12-313 374-616 (620)
77 COG2021 MET2 Homoserine acetyl 99.6 1E-14 2.2E-19 122.6 16.0 120 11-130 33-181 (368)
78 PF03096 Ndr: Ndr family; Int 99.6 3.1E-14 6.8E-19 116.9 18.3 266 8-312 3-278 (283)
79 TIGR03502 lipase_Pla1_cef extr 99.6 2.5E-15 5.4E-20 140.0 12.4 112 6-117 420-576 (792)
80 PF12146 Hydrolase_4: Putative 99.6 5.4E-15 1.2E-19 99.3 8.7 78 13-91 1-79 (79)
81 COG3208 GrsT Predicted thioest 99.6 2.5E-14 5.4E-19 113.8 13.5 223 27-311 7-234 (244)
82 PF00326 Peptidase_S9: Prolyl 99.6 2.6E-15 5.7E-20 122.4 7.8 194 45-313 5-209 (213)
83 TIGR01839 PHA_synth_II poly(R) 99.6 3.8E-13 8.3E-18 120.6 18.8 103 25-132 213-329 (560)
84 PF02230 Abhydrolase_2: Phosph 99.5 8.8E-14 1.9E-18 113.5 12.7 183 24-313 11-215 (216)
85 COG0429 Predicted hydrolase of 99.5 1.3E-12 2.9E-17 108.3 17.9 115 12-128 59-182 (345)
86 KOG1838 Alpha/beta hydrolase [ 99.5 1.1E-11 2.3E-16 106.6 21.7 121 6-128 95-233 (409)
87 TIGR00976 /NonD putative hydro 99.5 1.2E-13 2.5E-18 128.1 10.6 116 12-130 5-131 (550)
88 TIGR01840 esterase_phb esteras 99.5 4.3E-13 9.2E-18 109.2 12.3 105 26-130 12-129 (212)
89 PRK10162 acetyl esterase; Prov 99.5 1.3E-11 2.9E-16 106.5 20.9 102 26-129 80-193 (318)
90 PF01738 DLH: Dienelactone hyd 99.5 2.6E-13 5.7E-18 111.0 9.4 182 26-313 13-217 (218)
91 PF05448 AXE1: Acetyl xylan es 99.4 3.8E-11 8.2E-16 102.9 18.2 119 8-128 61-206 (320)
92 TIGR01849 PHB_depoly_PhaZ poly 99.4 6.7E-11 1.5E-15 103.3 19.7 102 28-133 103-210 (406)
93 COG0400 Predicted esterase [Ge 99.4 7.5E-12 1.6E-16 99.7 11.9 104 21-129 12-132 (207)
94 COG0412 Dienelactone hydrolase 99.4 1.1E-10 2.3E-15 96.0 18.0 99 28-127 28-142 (236)
95 PF00975 Thioesterase: Thioest 99.3 1.4E-11 2.9E-16 101.6 11.2 99 28-130 1-103 (229)
96 PF07819 PGAP1: PGAP1-like pro 99.3 1.9E-11 4.2E-16 99.6 11.4 102 26-132 3-124 (225)
97 COG2945 Predicted hydrolase of 99.3 1.8E-10 3.8E-15 88.1 15.0 91 25-120 26-127 (210)
98 PF05728 UPF0227: Uncharacteri 99.3 8.3E-10 1.8E-14 86.9 17.4 85 30-130 2-90 (187)
99 PF06821 Ser_hydrolase: Serine 99.3 1.7E-10 3.6E-15 89.9 12.7 88 30-130 1-90 (171)
100 PF02273 Acyl_transf_2: Acyl t 99.2 9E-10 2E-14 87.4 16.2 117 7-127 5-130 (294)
101 PRK10252 entF enterobactin syn 99.2 5.1E-11 1.1E-15 121.7 11.8 98 27-129 1068-1169(1296)
102 PRK10115 protease 2; Provision 99.2 1.4E-09 3.1E-14 102.8 19.7 119 11-129 424-557 (686)
103 COG3571 Predicted hydrolase of 99.2 8.7E-10 1.9E-14 81.6 14.0 103 29-132 16-125 (213)
104 PLN02733 phosphatidylcholine-s 99.2 1.8E-10 4E-15 102.3 10.2 94 38-132 105-202 (440)
105 PF10230 DUF2305: Uncharacteri 99.1 9.3E-10 2E-14 92.3 12.8 104 27-130 2-121 (266)
106 KOG2624 Triglyceride lipase-ch 99.1 2.7E-09 5.8E-14 93.2 15.6 131 3-133 47-201 (403)
107 PF12740 Chlorophyllase2: Chlo 99.1 5.1E-10 1.1E-14 91.4 9.2 102 27-130 17-130 (259)
108 COG3243 PhaC Poly(3-hydroxyalk 99.1 1.7E-09 3.7E-14 92.7 10.9 106 26-131 106-217 (445)
109 PF08538 DUF1749: Protein of u 99.1 5.3E-09 1.1E-13 87.2 13.5 99 27-130 33-147 (303)
110 PF06500 DUF1100: Alpha/beta h 99.0 3.1E-09 6.8E-14 92.3 12.5 120 9-130 170-295 (411)
111 COG3319 Thioesterase domains o 99.0 3.7E-09 8.1E-14 87.0 11.3 100 28-132 1-104 (257)
112 PF01674 Lipase_2: Lipase (cla 99.0 1.1E-09 2.3E-14 88.3 7.8 89 28-117 2-96 (219)
113 PF03403 PAF-AH_p_II: Platelet 99.0 2.6E-09 5.5E-14 93.9 9.4 103 27-130 100-261 (379)
114 PRK05371 x-prolyl-dipeptidyl a 99.0 3.3E-08 7.2E-13 94.4 17.4 81 46-129 271-371 (767)
115 COG3458 Acetyl esterase (deace 99.0 1.9E-08 4.2E-13 81.2 13.3 118 8-127 61-206 (321)
116 PF06028 DUF915: Alpha/beta hy 98.9 6E-09 1.3E-13 86.0 8.3 106 27-132 11-144 (255)
117 PF09752 DUF2048: Uncharacteri 98.9 1.8E-07 3.8E-12 79.4 17.0 105 25-129 90-208 (348)
118 PTZ00472 serine carboxypeptida 98.9 2.5E-08 5.4E-13 90.1 12.5 125 6-130 49-215 (462)
119 COG4757 Predicted alpha/beta h 98.9 1.5E-08 3.2E-13 79.9 9.4 115 12-128 14-135 (281)
120 COG4188 Predicted dienelactone 98.9 1.6E-08 3.5E-13 85.9 10.4 94 26-119 70-182 (365)
121 PF00151 Lipase: Lipase; Inte 98.9 1.8E-09 3.9E-14 92.9 4.3 104 25-130 69-186 (331)
122 PF02129 Peptidase_S15: X-Pro 98.9 1.7E-08 3.6E-13 85.4 9.9 115 12-129 1-134 (272)
123 KOG3043 Predicted hydrolase re 98.8 2.6E-08 5.6E-13 78.3 9.0 115 9-126 23-149 (242)
124 PF07224 Chlorophyllase: Chlor 98.8 1.5E-08 3.2E-13 81.5 7.6 100 28-130 47-156 (307)
125 PRK04940 hypothetical protein; 98.8 3.3E-07 7.1E-12 70.9 14.8 84 30-130 2-91 (180)
126 KOG4627 Kynurenine formamidase 98.8 4.4E-08 9.5E-13 75.8 9.1 107 15-129 55-170 (270)
127 PF10503 Esterase_phd: Esteras 98.7 3.8E-07 8.2E-12 73.7 12.4 104 27-130 16-131 (220)
128 PF06057 VirJ: Bacterial virul 98.7 2.5E-06 5.5E-11 66.2 16.1 94 29-129 4-105 (192)
129 smart00824 PKS_TE Thioesterase 98.7 1.8E-07 4E-12 75.5 10.5 93 32-129 2-100 (212)
130 COG1075 LipA Predicted acetylt 98.7 8.5E-08 1.8E-12 83.2 8.6 99 28-130 60-163 (336)
131 PF05990 DUF900: Alpha/beta hy 98.6 1.2E-07 2.6E-12 77.9 8.2 103 26-129 17-135 (233)
132 PF03959 FSH1: Serine hydrolas 98.6 1.5E-07 3.2E-12 76.5 8.7 90 27-117 4-123 (212)
133 PF12715 Abhydrolase_7: Abhydr 98.6 2.5E-07 5.4E-12 79.3 10.2 101 27-128 115-257 (390)
134 PF05057 DUF676: Putative seri 98.6 1.4E-07 3.1E-12 76.7 8.1 86 27-115 4-97 (217)
135 KOG2100 Dipeptidyl aminopeptid 98.6 3.8E-06 8.2E-11 80.3 18.3 123 5-129 499-642 (755)
136 PF08840 BAAT_C: BAAT / Acyl-C 98.6 1.4E-07 3.1E-12 76.5 7.5 48 82-130 5-55 (213)
137 PF11339 DUF3141: Protein of u 98.6 6.5E-06 1.4E-10 72.9 17.1 98 25-131 66-175 (581)
138 PF05677 DUF818: Chlamydia CHL 98.6 1.5E-06 3.2E-11 73.1 12.5 105 8-117 116-236 (365)
139 PF07859 Abhydrolase_3: alpha/ 98.5 3.7E-07 8.1E-12 74.1 8.3 91 30-129 1-108 (211)
140 COG3509 LpqC Poly(3-hydroxybut 98.5 2.3E-06 5.1E-11 70.4 11.6 122 6-130 37-178 (312)
141 KOG2551 Phospholipase/carboxyh 98.5 1.2E-05 2.7E-10 63.4 15.0 60 245-311 161-222 (230)
142 KOG1515 Arylacetamide deacetyl 98.4 8.8E-05 1.9E-09 63.9 20.3 100 26-130 89-206 (336)
143 KOG2112 Lysophospholipase [Lip 98.4 6.4E-06 1.4E-10 64.5 10.9 99 28-126 4-123 (206)
144 KOG2281 Dipeptidyl aminopeptid 98.3 3.4E-05 7.3E-10 69.8 14.6 99 27-125 642-756 (867)
145 PF00756 Esterase: Putative es 98.3 2.9E-06 6.3E-11 70.9 7.6 104 26-129 23-148 (251)
146 COG4814 Uncharacterized protei 98.2 9.9E-06 2.1E-10 65.1 8.9 105 28-132 46-177 (288)
147 PF05577 Peptidase_S28: Serine 98.2 3.5E-05 7.6E-10 69.8 13.6 106 26-132 28-149 (434)
148 KOG1553 Predicted alpha/beta h 98.2 7.3E-06 1.6E-10 68.7 8.2 95 28-127 244-341 (517)
149 PRK10439 enterobactin/ferric e 98.2 4E-05 8.6E-10 68.4 13.1 114 14-129 194-321 (411)
150 KOG3975 Uncharacterized conser 98.2 8.2E-05 1.8E-09 59.8 13.0 125 5-129 2-145 (301)
151 COG0657 Aes Esterase/lipase [L 98.2 5.3E-05 1.1E-09 65.5 13.1 99 26-129 78-189 (312)
152 COG3545 Predicted esterase of 98.1 3.3E-05 7.1E-10 58.9 9.7 90 28-130 3-93 (181)
153 PF06441 EHN: Epoxide hydrolas 98.1 7E-06 1.5E-10 58.7 5.3 45 3-47 67-112 (112)
154 PF03583 LIP: Secretory lipase 98.1 4.1E-05 8.9E-10 65.2 10.8 84 46-129 18-111 (290)
155 COG3150 Predicted esterase [Ge 98.0 1.9E-05 4.1E-10 59.4 6.8 88 30-129 2-89 (191)
156 COG4099 Predicted peptidase [G 98.0 8.2E-05 1.8E-09 61.4 11.0 114 12-129 170-302 (387)
157 COG4782 Uncharacterized protei 98.0 3.5E-05 7.7E-10 65.4 8.5 104 25-128 114-231 (377)
158 COG2936 Predicted acyl esteras 98.0 3.5E-05 7.7E-10 69.8 8.5 119 8-129 23-157 (563)
159 PF02450 LCAT: Lecithin:choles 98.0 8.9E-05 1.9E-09 65.9 10.8 109 11-132 37-161 (389)
160 KOG3847 Phospholipase A2 (plat 97.9 0.00012 2.5E-09 60.9 10.4 41 27-67 118-158 (399)
161 PLN02606 palmitoyl-protein thi 97.9 5.8E-05 1.3E-09 63.2 8.3 98 27-130 26-131 (306)
162 PF00450 Peptidase_S10: Serine 97.9 0.00014 3.1E-09 65.4 11.4 125 6-130 13-180 (415)
163 cd00312 Esterase_lipase Estera 97.8 0.00015 3.2E-09 66.9 10.7 118 12-131 77-213 (493)
164 KOG3724 Negative regulator of 97.8 0.00011 2.4E-09 68.2 9.3 114 12-130 66-219 (973)
165 PLN02633 palmitoyl protein thi 97.7 0.00032 6.8E-09 58.9 9.6 96 27-130 25-130 (314)
166 KOG2183 Prolylcarboxypeptidase 97.7 0.00024 5.2E-09 61.3 8.5 102 28-132 81-203 (492)
167 KOG3967 Uncharacterized conser 97.7 0.00057 1.2E-08 53.7 9.8 104 28-132 102-228 (297)
168 KOG3253 Predicted alpha/beta h 97.7 0.0002 4.4E-09 64.5 8.0 95 26-129 175-284 (784)
169 cd00741 Lipase Lipase. Lipase 97.6 0.00025 5.5E-09 54.4 6.8 52 79-130 7-66 (153)
170 PF12048 DUF3530: Protein of u 97.6 0.0048 1E-07 53.1 15.2 101 29-129 89-227 (310)
171 PF10142 PhoPQ_related: PhoPQ- 97.6 0.0025 5.4E-08 55.6 13.2 58 245-311 260-318 (367)
172 COG0627 Predicted esterase [Ge 97.6 0.00046 1E-08 59.1 8.6 105 26-130 53-186 (316)
173 PF02089 Palm_thioest: Palmito 97.5 0.00012 2.6E-09 60.8 4.6 102 27-130 5-115 (279)
174 PF04083 Abhydro_lipase: Parti 97.5 0.0003 6.5E-09 44.6 4.7 41 4-44 12-60 (63)
175 KOG2182 Hydrolytic enzymes of 97.4 0.0012 2.7E-08 58.5 9.5 108 25-132 84-208 (514)
176 KOG2541 Palmitoyl protein thio 97.4 0.0018 3.8E-08 52.9 9.5 98 28-130 24-127 (296)
177 PF08386 Abhydrolase_4: TAP-li 97.4 0.00037 8E-09 49.4 4.9 60 247-312 34-93 (103)
178 PF01764 Lipase_3: Lipase (cla 97.3 0.00072 1.6E-08 50.9 6.5 39 80-118 48-86 (140)
179 PLN03016 sinapoylglucose-malat 97.3 0.0034 7.4E-08 56.5 11.1 126 5-130 38-209 (433)
180 PF10340 DUF2424: Protein of u 97.3 0.01 2.2E-07 51.8 13.2 119 12-132 104-236 (374)
181 KOG3101 Esterase D [General fu 97.2 8.7E-05 1.9E-09 58.1 0.5 103 27-129 44-174 (283)
182 PLN02209 serine carboxypeptida 97.2 0.0068 1.5E-07 54.6 12.4 125 6-130 41-211 (437)
183 PF05705 DUF829: Eukaryotic pr 97.2 0.0054 1.2E-07 50.8 11.1 64 245-310 176-240 (240)
184 COG1505 Serine proteases of th 97.2 0.0061 1.3E-07 55.5 11.2 114 12-125 403-529 (648)
185 COG1073 Hydrolases of the alph 97.1 0.013 2.8E-07 49.7 13.0 65 245-313 229-297 (299)
186 PLN02517 phosphatidylcholine-s 97.1 0.0014 3E-08 59.9 6.8 88 42-132 157-264 (642)
187 COG2272 PnbA Carboxylesterase 97.0 0.0092 2E-07 53.3 10.8 116 12-130 78-216 (491)
188 PF06259 Abhydrolase_8: Alpha/ 97.0 0.027 5.8E-07 44.0 12.0 52 79-130 87-143 (177)
189 COG2819 Predicted hydrolase of 97.0 0.005 1.1E-07 50.7 8.1 35 95-129 136-170 (264)
190 cd00519 Lipase_3 Lipase (class 96.7 0.0053 1.2E-07 50.5 6.6 24 94-117 126-149 (229)
191 PF11187 DUF2974: Protein of u 96.6 0.0066 1.4E-07 49.5 6.5 47 83-130 72-122 (224)
192 PF11144 DUF2920: Protein of u 96.6 0.021 4.5E-07 50.1 9.8 34 97-130 185-218 (403)
193 KOG1551 Uncharacterized conser 96.6 0.01 2.2E-07 48.5 7.1 56 250-312 309-365 (371)
194 KOG2369 Lecithin:cholesterol a 96.6 0.0044 9.4E-08 54.9 5.5 87 41-130 124-224 (473)
195 PLN02162 triacylglycerol lipas 96.5 0.0071 1.5E-07 53.8 6.5 53 79-131 261-321 (475)
196 COG2939 Carboxypeptidase C (ca 96.5 0.01 2.3E-07 53.0 7.2 101 26-127 100-232 (498)
197 PLN00413 triacylglycerol lipas 96.4 0.011 2.4E-07 52.8 6.9 52 80-131 268-327 (479)
198 KOG1282 Serine carboxypeptidas 96.3 0.047 1E-06 49.1 10.6 124 5-129 45-211 (454)
199 PF00135 COesterase: Carboxyle 96.3 0.035 7.7E-07 51.7 10.4 119 12-131 107-245 (535)
200 COG3946 VirJ Type IV secretory 96.1 0.031 6.7E-07 48.6 7.8 68 45-119 278-349 (456)
201 PTZ00472 serine carboxypeptida 96.1 0.0091 2E-07 54.4 4.9 66 247-312 364-458 (462)
202 PF05277 DUF726: Protein of un 96.0 0.019 4.2E-07 49.7 6.2 39 93-131 217-260 (345)
203 KOG4372 Predicted alpha/beta h 95.9 0.012 2.5E-07 51.3 4.6 88 27-115 80-169 (405)
204 KOG4840 Predicted hydrolases o 95.9 0.12 2.6E-06 41.3 9.8 97 27-128 36-141 (299)
205 KOG1202 Animal-type fatty acid 95.8 0.047 1E-06 53.8 8.5 95 25-130 2121-2218(2376)
206 PF05576 Peptidase_S37: PS-10 95.8 0.017 3.8E-07 50.4 5.1 111 16-130 54-168 (448)
207 PF07082 DUF1350: Protein of u 95.8 0.087 1.9E-06 43.1 8.8 89 29-128 19-122 (250)
208 PLN02571 triacylglycerol lipas 95.8 0.016 3.5E-07 51.2 5.0 37 80-116 208-246 (413)
209 PLN02454 triacylglycerol lipas 95.7 0.019 4.1E-07 50.7 5.2 34 83-116 213-248 (414)
210 PLN02310 triacylglycerol lipas 95.5 0.043 9.2E-07 48.4 6.5 37 80-116 189-229 (405)
211 PLN02934 triacylglycerol lipas 95.5 0.049 1.1E-06 49.2 6.9 37 79-115 304-340 (515)
212 PLN02213 sinapoylglucose-malat 95.4 0.099 2.1E-06 45.3 8.6 65 247-312 233-316 (319)
213 PLN02408 phospholipase A1 95.4 0.027 5.9E-07 49.0 4.9 36 82-117 184-221 (365)
214 PF04301 DUF452: Protein of un 95.2 0.036 7.9E-07 44.5 4.8 78 27-130 11-89 (213)
215 PF01083 Cutinase: Cutinase; 95.1 0.089 1.9E-06 41.4 6.6 51 82-132 67-123 (179)
216 COG1770 PtrB Protease II [Amin 95.0 2.3 5E-05 39.9 16.1 102 26-127 447-558 (682)
217 PF00450 Peptidase_S10: Serine 94.9 0.02 4.2E-07 51.6 2.7 65 247-311 330-414 (415)
218 PLN02213 sinapoylglucose-malat 94.8 0.072 1.6E-06 46.2 5.9 76 55-130 2-95 (319)
219 PLN02324 triacylglycerol lipas 94.6 0.057 1.2E-06 47.7 4.9 36 81-116 198-235 (415)
220 PLN02802 triacylglycerol lipas 94.5 0.064 1.4E-06 48.5 5.0 37 81-117 313-351 (509)
221 PLN03037 lipase class 3 family 94.5 0.07 1.5E-06 48.4 5.2 36 81-116 299-338 (525)
222 PLN02753 triacylglycerol lipas 94.4 0.071 1.5E-06 48.4 5.0 36 81-116 292-332 (531)
223 PLN02719 triacylglycerol lipas 94.0 0.094 2E-06 47.5 4.9 35 82-116 279-318 (518)
224 PLN02209 serine carboxypeptida 93.8 0.14 3E-06 46.3 5.7 65 247-312 351-434 (437)
225 PLN03016 sinapoylglucose-malat 93.8 0.15 3.2E-06 46.1 5.9 65 247-312 347-430 (433)
226 PLN02761 lipase class 3 family 93.7 0.12 2.5E-06 47.0 4.9 36 81-116 273-314 (527)
227 PF11288 DUF3089: Protein of u 93.5 0.19 4.2E-06 40.2 5.4 64 54-117 45-116 (207)
228 KOG1282 Serine carboxypeptidas 93.3 0.18 4E-06 45.4 5.6 65 248-312 364-447 (454)
229 PF09949 DUF2183: Uncharacteri 92.8 2.4 5.1E-05 29.7 9.5 84 42-126 12-97 (100)
230 KOG1283 Serine carboxypeptidas 92.8 0.53 1.2E-05 39.9 7.1 123 7-130 6-165 (414)
231 KOG4569 Predicted lipase [Lipi 92.6 0.22 4.9E-06 43.4 5.0 37 80-116 155-191 (336)
232 COG2382 Fes Enterochelin ester 92.4 0.22 4.8E-06 41.9 4.4 110 15-128 84-209 (299)
233 PLN02847 triacylglycerol lipas 92.3 0.28 6E-06 45.3 5.3 21 96-116 251-271 (633)
234 KOG1516 Carboxylesterase and r 92.3 1.3 2.8E-05 41.5 10.1 119 12-130 95-231 (545)
235 KOG2237 Predicted serine prote 90.2 0.26 5.7E-06 45.6 3.1 102 26-127 469-580 (712)
236 KOG2029 Uncharacterized conser 90.0 0.32 7E-06 44.7 3.4 62 54-116 478-546 (697)
237 COG4947 Uncharacterized protei 88.0 1.2 2.7E-05 34.2 4.8 34 97-130 102-135 (227)
238 PF08237 PE-PPE: PE-PPE domain 87.7 6.2 0.00013 32.3 9.2 77 54-130 2-88 (225)
239 KOG4540 Putative lipase essent 84.9 1.6 3.5E-05 36.5 4.3 32 87-118 267-298 (425)
240 COG5153 CVT17 Putative lipase 84.9 1.6 3.5E-05 36.5 4.3 32 87-118 267-298 (425)
241 PF07519 Tannase: Tannase and 84.9 2 4.4E-05 39.4 5.5 65 248-312 354-426 (474)
242 KOG2385 Uncharacterized conser 83.2 3.3 7.2E-05 37.7 5.8 41 93-133 444-489 (633)
243 cd01714 ETF_beta The electron 82.9 8.6 0.00019 30.9 7.8 65 53-127 75-145 (202)
244 COG2830 Uncharacterized protei 82.6 3.6 7.8E-05 31.4 5.0 76 29-130 13-89 (214)
245 COG4287 PqaA PhoPQ-activated p 81.3 9.9 0.00022 33.3 7.7 58 245-311 327-385 (507)
246 cd07225 Pat_PNPLA6_PNPLA7 Pata 79.9 2.3 4.9E-05 36.6 3.7 32 86-117 33-64 (306)
247 PRK10279 hypothetical protein; 79.7 2.3 5E-05 36.5 3.6 34 86-119 23-56 (300)
248 PF00698 Acyl_transf_1: Acyl t 78.3 1.8 3.9E-05 37.5 2.6 30 86-115 74-103 (318)
249 COG1752 RssA Predicted esteras 77.7 2.8 6.2E-05 36.1 3.7 33 86-118 29-61 (306)
250 PRK12467 peptide synthase; Pro 77.6 11 0.00024 44.4 9.0 96 28-128 3693-3792(3956)
251 smart00827 PKS_AT Acyl transfe 76.8 3 6.5E-05 35.6 3.6 30 86-115 72-101 (298)
252 COG4553 DepA Poly-beta-hydroxy 76.3 33 0.00072 29.2 9.1 102 28-133 104-211 (415)
253 cd07198 Patatin Patatin-like p 76.3 3.1 6.8E-05 32.3 3.3 33 86-118 16-48 (172)
254 cd07227 Pat_Fungal_NTE1 Fungal 76.2 3.5 7.6E-05 34.7 3.7 32 86-117 28-59 (269)
255 PF07519 Tannase: Tannase and 75.8 4.6 9.9E-05 37.2 4.6 78 51-129 56-148 (474)
256 cd07210 Pat_hypo_W_succinogene 74.9 4.4 9.6E-05 33.0 3.9 31 88-118 20-50 (221)
257 TIGR03131 malonate_mdcH malona 74.6 3.7 8.1E-05 35.0 3.6 30 86-115 66-95 (295)
258 cd07207 Pat_ExoU_VipD_like Exo 73.4 4.6 9.9E-05 32.0 3.6 31 87-117 18-48 (194)
259 PF07859 Abhydrolase_3: alpha/ 72.1 1.5 3.2E-05 35.2 0.5 44 248-295 167-210 (211)
260 TIGR00128 fabD malonyl CoA-acy 71.8 4.5 9.6E-05 34.4 3.4 30 87-116 73-103 (290)
261 PF09994 DUF2235: Uncharacteri 71.6 30 0.00065 29.3 8.3 63 55-117 36-113 (277)
262 PF06850 PHB_depo_C: PHB de-po 70.1 5.1 0.00011 31.7 3.0 66 245-313 131-202 (202)
263 COG2939 Carboxypeptidase C (ca 69.5 10 0.00022 34.6 5.1 65 247-311 425-489 (498)
264 PRK02399 hypothetical protein; 69.3 79 0.0017 28.4 10.4 97 31-127 6-128 (406)
265 PF06792 UPF0261: Uncharacteri 68.1 66 0.0014 28.8 9.7 88 40-127 14-126 (403)
266 PF03610 EIIA-man: PTS system 67.5 42 0.00092 23.9 7.4 73 29-114 2-76 (116)
267 cd07228 Pat_NTE_like_bacteria 67.4 7.8 0.00017 30.2 3.7 31 89-119 21-51 (175)
268 cd07209 Pat_hypo_Ecoli_Z1214_l 66.9 7.6 0.00016 31.5 3.6 33 86-118 16-48 (215)
269 PRK11613 folP dihydropteroate 66.4 40 0.00088 28.6 7.9 77 27-112 133-227 (282)
270 COG3673 Uncharacterized conser 65.6 65 0.0014 27.9 8.7 90 27-116 31-142 (423)
271 TIGR03712 acc_sec_asp2 accesso 63.8 58 0.0013 29.9 8.6 104 8-117 270-378 (511)
272 PF11713 Peptidase_C80: Peptid 63.7 4.7 0.0001 30.9 1.7 51 58-108 57-116 (157)
273 cd07230 Pat_TGL4-5_like Triacy 63.4 4.5 9.7E-05 36.6 1.8 38 87-124 92-129 (421)
274 COG3933 Transcriptional antite 62.3 54 0.0012 29.7 8.0 75 28-115 110-184 (470)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 60.7 14 0.0003 28.7 4.0 29 89-117 21-49 (175)
276 cd07212 Pat_PNPLA9 Patatin-lik 60.6 15 0.00031 31.8 4.3 32 86-117 18-53 (312)
277 TIGR01361 DAHP_synth_Bsub phos 60.5 92 0.002 26.1 9.0 73 26-106 131-206 (260)
278 TIGR02816 pfaB_fam PfaB family 60.0 9.9 0.00021 35.5 3.4 32 86-117 254-286 (538)
279 cd07229 Pat_TGL3_like Triacylg 59.3 5.4 0.00012 35.5 1.5 40 86-125 101-140 (391)
280 cd00006 PTS_IIA_man PTS_IIA, P 58.4 58 0.0013 23.5 6.6 73 29-114 3-76 (122)
281 PF10605 3HBOH: 3HB-oligomer h 57.4 12 0.00027 35.0 3.4 49 247-295 555-605 (690)
282 COG3621 Patatin [General funct 56.8 18 0.00039 31.2 4.0 39 81-119 22-65 (394)
283 cd07208 Pat_hypo_Ecoli_yjju_li 54.6 17 0.00038 30.4 3.8 34 88-121 18-52 (266)
284 TIGR02764 spore_ybaN_pdaB poly 54.6 11 0.00023 29.8 2.4 33 29-61 153-188 (191)
285 cd07232 Pat_PLPL Patain-like p 54.4 6.9 0.00015 35.2 1.4 41 84-125 84-124 (407)
286 TIGR02884 spore_pdaA delta-lac 54.2 15 0.00033 30.0 3.3 33 29-61 188-221 (224)
287 TIGR03586 PseI pseudaminic aci 53.6 1.5E+02 0.0033 25.8 10.1 83 26-118 133-216 (327)
288 cd07231 Pat_SDP1-like Sugar-De 53.4 8.8 0.00019 33.1 1.8 35 87-121 87-121 (323)
289 COG0218 Predicted GTPase [Gene 51.7 23 0.0005 28.3 3.7 15 57-71 72-86 (200)
290 PRK13397 3-deoxy-7-phosphohept 51.1 1.5E+02 0.0032 24.8 8.9 91 26-126 121-218 (250)
291 PRK05579 bifunctional phosphop 51.0 1.5E+02 0.0032 26.8 9.2 75 28-103 117-196 (399)
292 COG4667 Predicted esterase of 50.6 13 0.00028 31.1 2.2 43 83-126 27-70 (292)
293 KOG4388 Hormone-sensitive lipa 49.9 63 0.0014 30.5 6.6 96 29-129 398-506 (880)
294 PF06309 Torsin: Torsin; Inte 49.6 15 0.00033 27.0 2.2 20 25-44 50-69 (127)
295 cd07224 Pat_like Patatin-like 48.8 24 0.00053 29.0 3.7 32 88-119 19-52 (233)
296 TIGR00521 coaBC_dfp phosphopan 48.6 1.8E+02 0.004 26.1 9.4 95 28-129 113-233 (390)
297 cd07222 Pat_PNPLA4 Patatin-lik 47.3 20 0.00044 29.7 3.0 23 99-122 34-56 (246)
298 cd07204 Pat_PNPLA_like Patatin 46.3 30 0.00064 28.7 3.9 20 99-118 34-53 (243)
299 PRK12595 bifunctional 3-deoxy- 45.6 2.1E+02 0.0045 25.4 9.1 74 26-106 224-299 (360)
300 PF05576 Peptidase_S37: PS-10 45.6 61 0.0013 29.2 5.7 55 248-310 352-411 (448)
301 COG3887 Predicted signaling pr 44.7 37 0.00079 31.9 4.3 101 27-130 258-377 (655)
302 cd07217 Pat17_PNPLA8_PNPLA9_li 44.2 31 0.00067 30.3 3.8 17 100-116 45-61 (344)
303 cd03818 GT1_ExpC_like This fam 44.0 44 0.00096 29.7 4.9 37 30-69 2-39 (396)
304 COG0482 TrmU Predicted tRNA(5- 43.8 78 0.0017 27.9 6.0 65 28-101 5-69 (356)
305 TIGR02873 spore_ylxY probable 43.6 28 0.00061 29.3 3.4 33 29-61 232-264 (268)
306 COG3727 Vsr DNA G:T-mismatch r 43.5 75 0.0016 23.5 4.9 8 28-35 58-65 (150)
307 cd07211 Pat_PNPLA8 Patatin-lik 43.2 34 0.00074 29.4 3.9 33 83-115 24-60 (308)
308 PF00975 Thioesterase: Thioest 42.1 52 0.0011 26.4 4.7 60 247-310 168-229 (229)
309 TIGR03569 NeuB_NnaB N-acetylne 42.0 2.4E+02 0.0052 24.7 9.2 84 26-119 132-218 (329)
310 cd07206 Pat_TGL3-4-5_SDP1 Tria 41.7 28 0.00061 29.8 3.1 38 83-121 85-122 (298)
311 TIGR00421 ubiX_pad polyprenyl 41.3 1.7E+02 0.0038 22.9 7.3 60 28-96 113-174 (181)
312 cd07218 Pat_iPLA2 Calcium-inde 39.0 43 0.00092 27.8 3.7 20 99-118 33-52 (245)
313 PRK06029 3-octaprenyl-4-hydrox 38.4 1.9E+02 0.0041 22.8 7.1 58 27-97 115-178 (185)
314 PF14253 AbiH: Bacteriophage a 37.3 40 0.00087 28.2 3.4 20 89-108 227-247 (270)
315 PRK09936 hypothetical protein; 37.3 1.2E+02 0.0026 25.8 6.0 51 39-95 36-86 (296)
316 PF00448 SRP54: SRP54-type pro 36.9 2.1E+02 0.0047 22.7 7.5 71 47-127 76-148 (196)
317 cd07221 Pat_PNPLA3 Patatin-lik 36.5 50 0.0011 27.5 3.8 35 83-118 16-54 (252)
318 PRK14974 cell division protein 36.3 3E+02 0.0065 24.2 8.6 67 51-127 219-287 (336)
319 COG0529 CysC Adenylylsulfate k 36.2 92 0.002 24.6 4.7 59 27-89 22-84 (197)
320 COG0331 FabD (acyl-carrier-pro 35.8 39 0.00084 29.2 3.0 22 94-115 83-104 (310)
321 TIGR03607 patatin-related prot 33.9 47 0.001 32.5 3.5 32 84-115 51-85 (739)
322 COG4850 Uncharacterized conser 33.7 2.3E+02 0.005 24.7 7.0 113 12-130 199-314 (373)
323 PF13207 AAA_17: AAA domain; P 32.6 75 0.0016 22.4 3.8 61 30-93 1-64 (121)
324 cd01819 Patatin_and_cPLA2 Pata 32.5 67 0.0015 24.4 3.6 19 96-114 28-46 (155)
325 PF03490 Varsurf_PPLC: Variant 32.4 55 0.0012 19.4 2.3 27 77-103 6-32 (51)
326 PRK13398 3-deoxy-7-phosphohept 31.9 3.1E+02 0.0068 23.1 9.9 73 27-106 134-208 (266)
327 COG4822 CbiK Cobalamin biosynt 31.9 2.5E+02 0.0054 22.9 6.6 60 27-101 138-199 (265)
328 KOG2521 Uncharacterized conser 31.7 53 0.0011 28.9 3.2 66 246-313 224-290 (350)
329 COG1087 GalE UDP-glucose 4-epi 31.6 1.9E+02 0.0041 25.0 6.3 81 47-129 17-118 (329)
330 KOG2521 Uncharacterized conser 31.3 3.4E+02 0.0074 24.0 8.0 86 28-114 39-127 (350)
331 cd07220 Pat_PNPLA2 Patatin-lik 31.0 66 0.0014 26.8 3.6 35 83-118 20-58 (249)
332 PRK14194 bifunctional 5,10-met 30.9 90 0.002 26.8 4.4 36 82-117 142-183 (301)
333 COG0657 Aes Esterase/lipase [L 30.6 77 0.0017 27.1 4.1 45 248-296 246-290 (312)
334 TIGR02683 upstrm_HI1419 probab 30.1 72 0.0016 21.9 3.2 27 10-40 53-80 (95)
335 PRK14665 mnmA tRNA-specific 2- 30.1 2.1E+02 0.0046 25.4 6.7 61 27-101 6-66 (360)
336 PRK08762 molybdopterin biosynt 30.1 3.2E+02 0.0069 24.3 8.0 37 91-130 131-168 (376)
337 cd01715 ETF_alpha The electron 29.8 2.6E+02 0.0056 21.4 8.2 84 27-125 29-115 (168)
338 TIGR01626 ytfJ_HI0045 conserve 29.8 84 0.0018 24.8 3.8 95 7-114 38-142 (184)
339 TIGR01840 esterase_phb esteras 29.8 37 0.0008 27.2 1.9 24 247-270 168-191 (212)
340 PF14488 DUF4434: Domain of un 29.7 2E+02 0.0043 22.2 5.8 61 39-100 18-83 (166)
341 TIGR01425 SRP54_euk signal rec 29.5 2.4E+02 0.0052 25.7 7.1 69 49-127 177-247 (429)
342 COG3545 Predicted esterase of 29.3 29 0.00063 27.1 1.1 60 245-311 115-177 (181)
343 PRK14581 hmsF outer membrane N 28.6 65 0.0014 31.1 3.5 78 26-103 47-142 (672)
344 PRK05920 aromatic acid decarbo 28.4 3.2E+02 0.0069 22.0 7.1 60 28-96 131-192 (204)
345 PLN02752 [acyl-carrier protein 27.9 56 0.0012 28.6 2.8 29 88-116 110-144 (343)
346 PF02129 Peptidase_S15: X-Pro 27.8 39 0.00083 28.4 1.7 18 245-262 226-243 (272)
347 TIGR02883 spore_cwlD N-acetylm 27.8 1.4E+02 0.003 23.5 4.8 43 57-101 2-49 (189)
348 TIGR02260 benz_CoA_red_B benzo 27.7 4.7E+02 0.01 23.8 9.7 39 27-66 266-304 (413)
349 PF02230 Abhydrolase_2: Phosph 27.4 1.4E+02 0.0031 23.9 5.0 57 27-92 155-214 (216)
350 PF03205 MobB: Molybdopterin g 27.0 1.2E+02 0.0026 22.6 4.1 42 29-70 1-44 (140)
351 cd07199 Pat17_PNPLA8_PNPLA9_li 27.0 80 0.0017 26.3 3.5 33 84-116 16-54 (258)
352 COG2230 Cfa Cyclopropane fatty 27.0 1.9E+02 0.0041 24.7 5.6 47 80-127 55-104 (283)
353 PF00862 Sucrose_synth: Sucros 26.9 1.1E+02 0.0024 28.4 4.4 39 79-117 383-423 (550)
354 COG0069 GltB Glutamate synthas 26.7 2.2E+02 0.0048 26.3 6.3 60 61-120 269-330 (485)
355 TIGR00959 ffh signal recogniti 26.5 4.4E+02 0.0096 24.1 8.2 69 49-127 177-247 (428)
356 PF02882 THF_DHG_CYH_C: Tetrah 26.5 1.6E+02 0.0035 22.6 4.7 38 79-116 16-59 (160)
357 cd01014 nicotinamidase_related 26.3 1.5E+02 0.0032 22.4 4.6 45 85-129 89-133 (155)
358 PF01734 Patatin: Patatin-like 26.2 55 0.0012 25.1 2.3 23 95-117 26-48 (204)
359 PF15566 Imm18: Immunity prote 26.1 92 0.002 18.8 2.6 30 79-108 4-33 (52)
360 cd07213 Pat17_PNPLA8_PNPLA9_li 26.0 51 0.0011 28.1 2.2 19 99-117 37-55 (288)
361 cd01012 YcaC_related YcaC rela 26.0 2.2E+02 0.0047 21.5 5.5 45 85-129 78-122 (157)
362 TIGR02813 omega_3_PfaA polyket 25.7 65 0.0014 36.6 3.3 29 86-114 664-692 (2582)
363 PRK07313 phosphopantothenoylcy 25.5 3E+02 0.0065 21.6 6.3 61 27-91 113-179 (182)
364 PRK07877 hypothetical protein; 25.2 1.3E+02 0.0028 29.5 4.9 40 89-130 101-140 (722)
365 PF06500 DUF1100: Alpha/beta h 24.8 61 0.0013 29.2 2.4 59 245-312 350-408 (411)
366 KOG2170 ATPase of the AAA+ sup 23.5 57 0.0012 28.0 1.9 20 25-44 107-126 (344)
367 KOG1209 1-Acyl dihydroxyaceton 23.5 1.3E+02 0.0029 24.5 3.8 36 27-63 6-41 (289)
368 cd01311 PDC_hydrolase 2-pyrone 23.4 2E+02 0.0043 24.0 5.2 46 83-128 30-77 (263)
369 PF02590 SPOUT_MTase: Predicte 23.1 1.9E+02 0.0042 22.1 4.6 44 53-107 66-110 (155)
370 TIGR00064 ftsY signal recognit 23.0 4.6E+02 0.01 22.1 7.6 68 50-127 150-225 (272)
371 PHA02114 hypothetical protein 22.9 1.3E+02 0.0028 20.8 3.2 32 29-60 84-115 (127)
372 cd01015 CSHase N-carbamoylsarc 22.7 2.1E+02 0.0046 22.1 5.0 46 84-129 103-148 (179)
373 KOG1283 Serine carboxypeptidas 22.5 53 0.0012 28.4 1.5 33 277-309 378-410 (414)
374 PF07643 DUF1598: Protein of u 22.4 2.1E+02 0.0045 19.3 4.0 31 85-115 32-62 (84)
375 PF01624 MutS_I: MutS domain I 22.4 43 0.00094 23.8 0.9 34 31-66 56-89 (113)
376 cd00401 AdoHcyase S-adenosyl-L 22.4 3.9E+02 0.0086 24.3 7.1 67 44-126 75-141 (413)
377 TIGR00090 iojap_ybeB iojap-lik 22.1 90 0.002 21.7 2.4 49 53-103 13-67 (99)
378 PF00857 Isochorismatase: Isoc 21.6 1.7E+02 0.0037 22.3 4.3 45 85-129 102-146 (174)
379 KOG2968 Predicted esterase of 21.6 80 0.0017 31.4 2.6 20 97-116 867-887 (1158)
380 COG1709 Predicted transcriptio 21.6 2.8E+02 0.0061 22.6 5.2 39 15-58 185-224 (241)
381 KOG4231 Intracellular membrane 21.5 61 0.0013 29.9 1.8 34 84-117 433-471 (763)
382 cd00431 cysteine_hydrolases Cy 21.3 2E+02 0.0043 21.6 4.5 44 85-128 100-143 (161)
383 PRK04148 hypothetical protein; 21.2 1.8E+02 0.004 21.6 4.0 44 82-129 4-47 (134)
384 TIGR00246 tRNA_RlmH_YbeA rRNA 21.2 2.5E+02 0.0053 21.5 4.8 45 55-110 66-110 (153)
385 COG1246 ArgA N-acetylglutamate 21.2 1.4E+02 0.0031 22.7 3.4 37 57-104 72-108 (153)
386 cd06292 PBP1_LacI_like_10 Liga 21.1 4.6E+02 0.01 21.4 7.9 75 29-105 58-132 (273)
387 PRK08105 flavodoxin; Provision 21.0 1.3E+02 0.0029 22.6 3.4 19 79-97 100-118 (149)
388 PF03405 FA_desaturase_2: Fatt 20.8 59 0.0013 28.3 1.5 64 60-125 231-306 (330)
389 cd07216 Pat17_PNPLA8_PNPLA9_li 20.6 62 0.0013 27.9 1.7 16 100-115 46-61 (309)
390 COG1576 Uncharacterized conser 20.6 3.9E+02 0.0085 20.4 5.6 50 53-113 66-115 (155)
391 smart00824 PKS_TE Thioesterase 20.5 1.6E+02 0.0034 22.8 4.0 58 245-309 151-211 (212)
392 TIGR03709 PPK2_rel_1 polyphosp 20.5 1.3E+02 0.0028 25.4 3.4 68 27-107 55-125 (264)
393 TIGR03707 PPK2_P_aer polyphosp 20.4 1.5E+02 0.0032 24.4 3.7 68 27-108 30-101 (230)
394 TIGR02354 thiF_fam2 thiamine b 20.4 2.1E+02 0.0046 22.9 4.5 40 88-130 14-54 (200)
395 KOG2872 Uroporphyrinogen decar 20.3 1.1E+02 0.0024 26.0 2.9 28 28-62 253-280 (359)
396 PRK13256 thiopurine S-methyltr 20.2 1.3E+02 0.0027 24.7 3.3 29 30-63 46-74 (226)
397 PF02540 NAD_synthase: NAD syn 20.1 5E+02 0.011 21.5 6.8 48 79-127 2-53 (242)
398 PF06028 DUF915: Alpha/beta hy 20.0 93 0.002 26.0 2.5 62 247-311 184-253 (255)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-46 Score=307.14 Aligned_cols=294 Identities=40% Similarity=0.759 Sum_probs=224.7
Q ss_pred cccceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 021282 2 DQIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (314)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (314)
..+++++++.+|.+++|.+.|. .++|.|+|+||||.++.+|+.++..|+..||||||+|+||||.|+.|..-+.||+..
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~-~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGP-GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEccEEEEEEeecC-CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 3467889999999999999986 678999999999999999999999999989999999999999999987667899999
Q ss_pred HHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCC--Cc-hhhhcCCcchhhhhccCccch
Q 021282 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPG--PI-EFHKYLPEGFYISRWQEPGRA 158 (314)
Q Consensus 82 ~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 158 (314)
++.|+..+++.||.++++++|||||++||+.+|..+|++|+++|+++.+...+. +. ........+.+.-..+++...
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcc
Confidence 999999999999999999999999999999999999999999999986544211 11 111222344444445666667
Q ss_pred hhhcccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCccccccccccccccc
Q 021282 159 EADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENF 238 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
++.+...+.+.+...++.. ........+. .....+.|++.++.+.+...+...++...++. |+.+....
T Consensus 179 E~~~s~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNy-yrn~~r~w 247 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKTFRTR-KTPGPLIVPK---------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNY-YRNFRRNW 247 (322)
T ss_pred hhhhccchhHHhHHhhhcc-ccCCccccCC---------CCCCccchhhHHHHHHHHhccccccccccchh-hHHHhhCc
Confidence 7766665555444432211 0000000000 11112568899999888888877777777776 77777665
Q ss_pred C---CCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCc-eEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 239 S---TPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNL-EIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 239 ~---~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
. .... .|++|+++|+|++|.+.+.+.. ....++..|+. +.++++++||+++.|+|+++++.|.+|+++.
T Consensus 248 ~a~~~~~~-~i~iPv~fi~G~~D~v~~~p~~-----~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 EAAPWALA-KITIPVLFIWGDLDPVLPYPIF-----GELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hhcccccc-ccccceEEEEecCcccccchhH-----HHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 3 2222 7899999999999999876522 22345667775 7888999999999999999999999999864
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.3e-39 Score=277.41 Aligned_cols=279 Identities=22% Similarity=0.307 Sum_probs=173.7
Q ss_pred ccceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC-----CCCC
Q 021282 3 QIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-----PEKT 77 (314)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-----~~~~ 77 (314)
+...++++++|.+++|...|+. +|+|||+|||++++..|..+++.|.+ .|+||++|+||||.|+.+.. ...|
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~--~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTS--GPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCC--CCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccC
Confidence 3457889999999999998852 68999999999999999999999976 48999999999999986531 1358
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcch--hhhhccCc
Q 021282 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGF--YISRWQEP 155 (314)
Q Consensus 78 ~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 155 (314)
+++++++|+.++++++++++++||||||||.+|+.+|+++|++|+++|+++++........... ..... ....+...
T Consensus 84 ~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 84 TFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LGRPFIKAFQNLLRE 162 (294)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hhhHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999986432110000000 00000 00000000
Q ss_pred cchhhh-cccccHHHHHHHHHhh-hcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccc
Q 021282 156 GRAEAD-FGRLDAKTVVRNIYIL-FSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRT 233 (314)
Q Consensus 156 ~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (314)
...... +.........+..+.. +.... .. ..+..+...... ........+..... +..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----------~~~ 222 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDS-AV---TDELVEAILRPG-----LEPGAVDVFLDFIS-----------YSG 222 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChh-hc---cHHHHHHHHhcc-----CCchHHHHHHHHhc-----------ccc
Confidence 000000 0000000000110000 00000 00 000000000000 00000001100000 000
Q ss_pred cccccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 234 LRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 234 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
. ... .....+|+||+++|+|++|..++.... ..+++..+++++++++++||++++|+|++|++.|.+|++++
T Consensus 223 ~-~~~-~~~l~~i~~P~lvi~G~~D~~~~~~~~------~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 223 G-PLP-EELLPAVKCPVLIAWGEKDPWEPVELG------RAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred c-cch-HHHHhhcCCCeEEEEecCCCCCChHHH------HHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 0 000 011116899999999999998865322 23456678899999999999999999999999999999864
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.2e-38 Score=271.46 Aligned_cols=272 Identities=28% Similarity=0.411 Sum_probs=173.4
Q ss_pred ccceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 021282 3 QIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (314)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (314)
+++..+++++|.+++|.+.|+ +|||||+||++++...|+.+++.|.+. |+||++|+||||.|+.+. ..|+++.+
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G~---g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~ 79 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETGE---GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADH 79 (295)
T ss_pred CCcceEEEECCEEEEEEEeCC---CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHH
Confidence 355678889999999999996 799999999999999999999988775 799999999999998764 35899999
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhc
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADF 162 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
++|+.+++++++++++++|||||||.+|+.+|.++|++|+++|+++++..+.....+.. ........+..+.......
T Consensus 80 a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 80 ARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPP--AVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcch--hHHHHHHHHhCcccccccc
Confidence 99999999999999999999999999999999999999999999986432211000000 0000000000000000000
Q ss_pred ccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccc-------
Q 021282 163 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR------- 235 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 235 (314)
. ........+ .... ....++++....+...+............++.+.
T Consensus 158 ~--~~~~~~~~~----~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (295)
T PRK03592 158 L--EENVFIERV----LPGS-------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPAD 212 (295)
T ss_pred c--chhhHHhhc----ccCc-------------------ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchh
Confidence 0 000000000 0000 0001122222111111100000000000000000
Q ss_pred -----cccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHH
Q 021282 236 -----ENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFL 310 (314)
Q Consensus 236 -----~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 310 (314)
.... ....+|+||+|+|+|++|..++++.... .+.+..+++++++++++||+++.|+|++|++.|.+|+
T Consensus 213 ~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~-----~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 213 VVALVEEYA-QWLATSDVPKLLINAEPGAILTTGAIRD-----WCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred hHhhhhHhH-HHhccCCCCeEEEeccCCcccCcHHHHH-----HHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 0000 0112689999999999999885433322 2344578899999999999999999999999999999
Q ss_pred hhc
Q 021282 311 NKH 313 (314)
Q Consensus 311 ~~~ 313 (314)
++.
T Consensus 287 ~~~ 289 (295)
T PRK03592 287 RRL 289 (295)
T ss_pred HHh
Confidence 763
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.9e-38 Score=270.77 Aligned_cols=127 Identities=31% Similarity=0.549 Sum_probs=115.0
Q ss_pred ccceeeeeeCC-----EEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCC
Q 021282 3 QIEHKFIKVQG-----LNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT 77 (314)
Q Consensus 3 ~~~~~~~~~~g-----~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 77 (314)
++..+++++++ .+|+|...|+ +++|+|||+||++++...|..+++.|.+.+|+|+++|+||||.|+.+.....|
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~-~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~ 96 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGP-ADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY 96 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCC-CCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC
Confidence 34567899988 8999999886 46899999999999999999999988767899999999999999876444468
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 78 ~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|.+++++++.
T Consensus 97 ~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999853
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.8e-37 Score=270.77 Aligned_cols=281 Identities=21% Similarity=0.354 Sum_probs=170.3
Q ss_pred eeeeeCCE-EEEEEeccCC---CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 021282 7 KFIKVQGL-NLHIAEAGAD---ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (314)
Q Consensus 7 ~~~~~~g~-~i~~~~~g~~---~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (314)
++++.+|. +++|.+.|+. +++|+||||||++++...|..++..|.+ +|+||++|+||||.|+.+.. ..|+++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 56777777 9999998861 1459999999999999999999988865 79999999999999987642 36899999
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh-cccceeeeEEecCCCCCCCCc---hhh-hc-CCcchhhhhcc-Cc
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ-HQERVSGVITLGVPILPPGPI---EFH-KY-LPEGFYISRWQ-EP 155 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lvl~~~~~~~~~~~---~~~-~~-~~~~~~~~~~~-~~ 155 (314)
++++.++++++++++++||||||||.+++.+|+. +|++|+++|+++++....... ... .. .+...+...+. .+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 9999999999999999999999999999999874 799999999998643211100 000 00 00000000000 00
Q ss_pred cchhhhcccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccc
Q 021282 156 GRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR 235 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
......+.....+..++..+.......... ..+..+....... .......+...... . . .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~--------~--~ 281 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAV---DDELVEIIRGPAD-----DEGALDAFVSIVTG--P--------P--G 281 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccC---CHHHHHHHHhhcc-----CCChHHHHHHHHhc--C--------C--C
Confidence 000000000000011111110000000000 0011100000000 00001111110000 0 0 0
Q ss_pred cccCCCccccccccEEEEecCCCcccCCCCc-hhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 236 ENFSTPEVIAVKVPALLIMGDKDYFLKFPGI-EDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 236 ~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
... .....+|++|||+|+|++|.++|.+.. ..+. ..+.+.+|++++++++++||++++|+|++|++.|.+||++
T Consensus 282 ~~~-~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~--~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 282 PNP-IKLIPRISLPILVLWGDQDPFTPLDGPVGKYF--SSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCH-HHHhhhcCCCEEEEEeCCCCCcCchhhHHHHH--HhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 000 001116899999999999998875421 1111 2345567999999999999999999999999999999975
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.8e-37 Score=263.33 Aligned_cols=265 Identities=17% Similarity=0.183 Sum_probs=168.5
Q ss_pred cceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHH
Q 021282 4 IEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (314)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a 83 (314)
+-.++++++|.+++|...+.+++++||||+||+++++..|..+++.|.. +|+||++|+||||.|+.+. ..++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~ 78 (276)
T TIGR02240 2 FIFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLA 78 (276)
T ss_pred eeEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHH
Confidence 4467889999999998754223458999999999999999999988864 7999999999999998653 358999999
Q ss_pred HHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcc
Q 021282 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFG 163 (314)
Q Consensus 84 ~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (314)
+|+.++++++++++++||||||||.+|+.+|.++|++|+++|+++++......... +. ....+... .....
T Consensus 79 ~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~--~~~~~~~~---~~~~~ 149 (276)
T TIGR02240 79 KLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK----PK--VLMMMASP---RRYIQ 149 (276)
T ss_pred HHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc----hh--HHHHhcCc---hhhhc
Confidence 99999999999999999999999999999999999999999999865321100000 00 00000000 00000
Q ss_pred cccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCcc
Q 021282 164 RLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEV 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.......... . ....... ..+............. .... ..... ...... .....
T Consensus 150 ~~~~~~~~~~---~-~~~~~~~---~~~~~~~~~~~~~~~~--~~~~---~~~~~-------------~~~~~~-~~~~l 203 (276)
T TIGR02240 150 PSHGIHIAPD---I-YGGAFRR---DPELAMAHASKVRSGG--KLGY---YWQLF-------------AGLGWT-SIHWL 203 (276)
T ss_pred cccccchhhh---h-ccceeec---cchhhhhhhhhcccCC--CchH---HHHHH-------------HHcCCc-hhhHh
Confidence 0000000000 0 0000000 0000000000000000 0000 00000 000000 00111
Q ss_pred ccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 244 IAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 244 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
.+|+||+++|+|++|.++++... .++.+.+|+++++++++ ||+++.|+|++|++.|.+|+++.
T Consensus 204 ~~i~~P~lii~G~~D~~v~~~~~------~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 204 HKIQQPTLVLAGDDDPIIPLINM------RLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hcCCCCEEEEEeCCCCcCCHHHH------HHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 26899999999999999875432 23456789999999975 99999999999999999999753
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-36 Score=259.28 Aligned_cols=273 Identities=19% Similarity=0.337 Sum_probs=170.6
Q ss_pred ccceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 021282 3 QIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (314)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (314)
+++.++++++|.+++|...|+ +|+|||+||++++...|+.++..|.+ +|+||++|+||||.|+.+.. ..|+++++
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~---~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 87 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGT---GPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEH 87 (286)
T ss_pred cccceEEEcCCcEEEEEECCC---CCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHH
Confidence 466788999999999999986 78999999999999999999888765 69999999999999987643 35889999
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhc
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADF 162 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
++++.+++++++.++++++||||||.||+.+|+++|++|+++|+++++..+...... ..+...+.... ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~ 160 (286)
T PRK03204 88 ARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAM------KAFSRVMSSPP-VQYAI 160 (286)
T ss_pred HHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhH------HHHHHHhcccc-chhhh
Confidence 999999999999999999999999999999999999999999988754322110000 00000000000 00000
Q ss_pred ccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccc-cccccCCC
Q 021282 163 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRT-LRENFSTP 241 (314)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (314)
. .........+ ...............+ ... ................ +.. .+. +.......
T Consensus 161 ~--~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~ 221 (286)
T PRK03204 161 L--RRNFFVERLI----PAGTEHRPSSAVMAHY-RAV-----QPNAAARRGVAEMPKQ--ILA-----ARPLLARLAREV 221 (286)
T ss_pred h--hhhHHHHHhc----cccccCCCCHHHHHHh-cCC-----CCCHHHHHHHHHHHHh--cch-----hhHHHHHhhhhh
Confidence 0 0000001100 0000000000111111 000 0000100000000000 000 000 00000000
Q ss_pred ccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 242 EVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 242 ~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
....+++||++|+|++|.+++++.. ...+++.+|++++++++++||++++|+|++|++.|.+||.
T Consensus 222 ~~~~~~~PtliI~G~~D~~~~~~~~-----~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 222 PATLGTKPTLLVWGMKDVAFRPKTI-----LPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hhhcCCCCeEEEecCCCcccCcHHH-----HHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 0002389999999999988754321 1345678899999999999999999999999999999973
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.1e-34 Score=247.13 Aligned_cols=269 Identities=22% Similarity=0.329 Sum_probs=161.4
Q ss_pred ceeeeeeC-----CEEEEEEeccCCCCCceEEEEcCCCCChhchHH---HHHHHhhCCcEEEEeCCCCCCCCCCCCCCCC
Q 021282 5 EHKFIKVQ-----GLNLHIAEAGADADAHVVVFLHGFPEIWYSWRH---QMVGVATAGFRAIAPDCRGYGLSDPPAEPEK 76 (314)
Q Consensus 5 ~~~~~~~~-----g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~---~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 76 (314)
..+++.++ |.+++|...|+ +|+|||+||++++...|.. .+..+++++|+|+++|+||||.|+.+.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~g~---~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 82 (282)
T TIGR03343 6 TSKFVKINEKGLSNFRIHYNEAGN---GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQ 82 (282)
T ss_pred cceEEEcccccccceeEEEEecCC---CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccc
Confidence 34555553 67899999886 7899999999998888864 3556767789999999999999986532222
Q ss_pred CCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCcc
Q 021282 77 TSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPG 156 (314)
Q Consensus 77 ~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (314)
++ ..+++|+.++++.+++++++++||||||++++.+|+++|++++++|+++++..... .... .+... ...+.
T Consensus 83 ~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~-~~~~~-~~~~~--- 154 (282)
T TIGR03343 83 RG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS--LFAP-MPMEG-IKLLF--- 154 (282)
T ss_pred cc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcc--cccc-CchHH-HHHHH---
Confidence 23 26789999999999999999999999999999999999999999999986422110 0000 00000 00000
Q ss_pred chhhhcccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCccccccccccccc
Q 021282 157 RAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRE 236 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
..+...... ........+....... ..+..+..... . .........+...... .. +.. .
T Consensus 155 ---~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~----~~----~~~--~ 213 (282)
T TIGR03343 155 ---KLYAEPSYE-TLKQMLNVFLFDQSLI---TEELLQGRWEN--I--QRQPEHLKNFLISSQK----AP----LST--W 213 (282)
T ss_pred ---HHhcCCCHH-HHHHHHhhCccCcccC---cHHHHHhHHHH--h--hcCHHHHHHHHHhccc----cc----ccc--c
Confidence 000000000 0111000000000000 00000000000 0 0000000011000000 00 000 0
Q ss_pred ccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 237 NFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 237 ~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
... ....+|+||+++++|++|.+++.+... ++.+.+|++++++++++||+++.|+|++|++.|.+||.+
T Consensus 214 ~~~-~~l~~i~~Pvlli~G~~D~~v~~~~~~------~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 214 DVT-ARLGEIKAKTLVTWGRDDRFVPLDHGL------KLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hHH-HHHhhCCCCEEEEEccCCCcCCchhHH------HHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 000 011268999999999999998754332 345677999999999999999999999999999999863
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=4.7e-35 Score=245.60 Aligned_cols=244 Identities=20% Similarity=0.268 Sum_probs=152.7
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEeCchH
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFGA 107 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~-~~~~lvGhS~Gg 107 (314)
+|||+||++.+...|+.+++.|.+.+|+||++|+||||.|+.+.. ..|+++++++|+.+++++|+. ++++||||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999977789999999999999976432 358999999999999999988 499999999999
Q ss_pred HHHHHHHHhcccceeeeEEecCCCCCCCCc---hhhhcCCcchhhhhccCccchhhhcccccHHHHHHHHHhhhcCCCCC
Q 021282 108 LTAYMFAIQHQERVSGVITLGVPILPPGPI---EFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIP 184 (314)
Q Consensus 108 ~va~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (314)
.|++.+|.++|++|+++|++++....++.. .+..... .. ...|....... ..........+
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~--~~~~~~~~~~~------------ 147 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVME-GT-EKIWDYTFGEG--PDKPPTGIMMK------------ 147 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhh-cc-ccceeeeeccC--CCCCcchhhcC------------
Confidence 999999999999999999998643211100 0000000 00 00000000000 00000000000
Q ss_pred CCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEEecCCCcccCCC
Q 021282 185 IAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFP 264 (314)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~ 264 (314)
........... ...+................ +.... ... .....+++|+++|+|++|..+++.
T Consensus 148 ----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~-~~~~~i~vP~lvi~g~~D~~~~~~ 210 (255)
T PLN02965 148 ----PEFVRHYYYNQ------SPLEDYTLSSKLLRPAPVRA-----FQDLD-KLP-PNPEAEKVPRVYIKTAKDNLFDPV 210 (255)
T ss_pred ----HHHHHHHHhcC------CCHHHHHHHHHhcCCCCCcc-----hhhhh-hcc-chhhcCCCCEEEEEcCCCCCCCHH
Confidence 00000000000 00000000000000000000 00000 000 011158999999999999988753
Q ss_pred CchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 265 GIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
. ...+++.+|++++++++++||++++|+|++|++.|.+|+++
T Consensus 211 ~------~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 211 R------QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred H------HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 2 23466788999999999999999999999999999999875
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.6e-34 Score=257.09 Aligned_cols=126 Identities=20% Similarity=0.372 Sum_probs=108.4
Q ss_pred ceeeeeeCCEEEEEEeccCCC--CCceEEEEcCCCCChhchHH-HHHHHh---hCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 021282 5 EHKFIKVQGLNLHIAEAGADA--DAHVVVFLHGFPEIWYSWRH-QMVGVA---TAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~--~~p~vlllHG~~~~~~~~~~-~~~~l~---~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (314)
...+++++|.+++|...|+.. .+|+|||+|||+++...|.. +++.|. ..+|+||++|+||||.|+.+. ...|+
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~yt 255 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSLYT 255 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCcCC
Confidence 346778888999999988632 25899999999999999985 345554 358999999999999998763 34589
Q ss_pred HHHHHHHHH-HHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 79 FQDMVDDLL-AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 79 ~~~~a~d~~-~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
++++++++. .+++.+++++++++||||||.+|+.+|+++|++|+++|+++++.
T Consensus 256 l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 256 LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 999999995 89999999999999999999999999999999999999998653
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=5.3e-34 Score=242.13 Aligned_cols=271 Identities=21% Similarity=0.333 Sum_probs=169.7
Q ss_pred ceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021282 5 EHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 84 (314)
..++++++|.+++|...|+ +++|+|||+||++++...|..+++.|.. +|+|+++|+||||.|+.+.. ..++++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 83 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGP-TAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAE 83 (278)
T ss_pred ccceeeECCEEEEEEecCC-CCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHH
Confidence 3578899999999999886 4579999999999999999999988865 69999999999999987643 3689999999
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhccc
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGR 164 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
|+.++++++++++++|+||||||.+++.+|.++|+++++++++++........ .....+. ...+... ..
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-~~~~~~~---~~~~~~~-------~~ 152 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM-AGTLFPY---MARVLAC-------NP 152 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc-cccccch---hhHhhhh-------cc
Confidence 99999999999999999999999999999999999999999987643211000 0000000 0000000 00
Q ss_pred ccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCC-CcccccccccccccccCCCcc
Q 021282 165 LDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSG-FRTALQVPYRTLRENFSTPEV 243 (314)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.. ...... . ... . ..+....... ....+......+...+.... ....... .............
T Consensus 153 ~~-~~~~~~---~-~~~----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 216 (278)
T TIGR03056 153 FT-PPMMSR---G-AAD----Q---QRVERLIRDT---GSLLDKAGMTYYGRLIRSPAHVDGALSM-MAQWDLAPLNRDL 216 (278)
T ss_pred cc-hHHHHh---h-ccc----C---cchhHHhhcc---ccccccchhhHHHHhhcCchhhhHHHHH-hhcccccchhhhc
Confidence 00 000000 0 000 0 0000000000 00000000000100000000 0000000 0000000000011
Q ss_pred ccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 244 IAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 244 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
.+|++|+++|+|++|.+++.... ..+.+.+|+++++.++++||+++.|+|++|++.|.+|++
T Consensus 217 ~~i~~P~lii~g~~D~~vp~~~~------~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 217 PRITIPLHLIAGEEDKAVPPDES------KRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ccCCCCEEEEEeCCCcccCHHHH------HHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 16899999999999998874322 334566799999999999999999999999999999984
No 12
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=254.72 Aligned_cols=120 Identities=20% Similarity=0.370 Sum_probs=101.0
Q ss_pred eeCCEEEEEEeccCCCC-------CceEEEEcCCCCChhchH--HHHHHH-------hhCCcEEEEeCCCCCCCCCCCCC
Q 021282 10 KVQGLNLHIAEAGADAD-------AHVVVFLHGFPEIWYSWR--HQMVGV-------ATAGFRAIAPDCRGYGLSDPPAE 73 (314)
Q Consensus 10 ~~~g~~i~~~~~g~~~~-------~p~vlllHG~~~~~~~~~--~~~~~l-------~~~~~~vi~~D~~G~G~S~~~~~ 73 (314)
+++|.+++|.+.|+ ++ +|+|||+||++++...|. .+...| ..++|+||++|+||||.|+.+..
T Consensus 46 ~~~g~~i~y~~~G~-~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~ 124 (360)
T PRK06489 46 TLPELRLHYTTLGT-PHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD 124 (360)
T ss_pred CcCCceEEEEecCC-CCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc
Confidence 46899999999996 33 799999999999988886 333333 24579999999999999987643
Q ss_pred C-----CCCCHHHHHHHHHHH-HHHhCCceEE-EEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 74 P-----EKTSFQDMVDDLLAI-LDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 74 ~-----~~~~~~~~a~d~~~~-~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
. ..|+++++++++.++ ++++++++++ ||||||||.+|+.+|.++|++|+++|++++.
T Consensus 125 ~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 125 GLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 2 148999999999885 5899999986 8999999999999999999999999999864
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=248.72 Aligned_cols=121 Identities=26% Similarity=0.446 Sum_probs=110.1
Q ss_pred eeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC--CCCCHHHHHHH
Q 021282 8 FIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP--EKTSFQDMVDD 85 (314)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~a~d 85 (314)
.++.+|++++|.+.|+ .++|+||||||++.+...|+.+++.|.+ +|+||++|+||||.|+.+... ..|++++++++
T Consensus 109 ~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 109 QASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred EEcCCceEEEEEecCC-CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 4567999999999996 4579999999999999999999988864 799999999999999876432 35899999999
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.++++++++++++||||||||.+++.+|.++|++|+++|+++++
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~ 231 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPP 231 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCC
Confidence 999999999999999999999999999999999999999999865
No 14
>PLN02578 hydrolase
Probab=100.00 E-value=1.7e-33 Score=246.65 Aligned_cols=118 Identities=25% Similarity=0.383 Sum_probs=108.3
Q ss_pred eeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021282 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (314)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~ 86 (314)
.+++.+|.+++|...|+ +|||||+||++++...|..+++.|.+ +|+|+++|+||||.|+++. ..|+...+++|+
T Consensus 69 ~~~~~~~~~i~Y~~~g~---g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l 142 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE---GLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQV 142 (354)
T ss_pred eEEEECCEEEEEEEcCC---CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHH
Confidence 56777999999999886 78999999999999999999988865 6999999999999998764 468999999999
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.++++.++.++++++||||||.+|+.+|.++|++|+++|+++++
T Consensus 143 ~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 143 ADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 99999999999999999999999999999999999999999864
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.6e-33 Score=236.37 Aligned_cols=250 Identities=16% Similarity=0.237 Sum_probs=157.2
Q ss_pred EEEEEecc--CCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021282 15 NLHIAEAG--ADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 92 (314)
Q Consensus 15 ~i~~~~~g--~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~ 92 (314)
+++|...+ ++.++|||||+||++++...|..++..|.. +|+||++|+||||.|+.+ ..++++++++|+.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~---~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD---PVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 34555532 224679999999999999999999888865 799999999999999864 347999999999999999
Q ss_pred hCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHH
Q 021282 93 LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVR 172 (314)
Q Consensus 93 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (314)
++.++++|+||||||.+|+.+|.++|++|+++|++++.+.......... ....+... ..... ........
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~------~~~~~~~~--~~~~~--~~~~~~~~ 147 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDE------IFAAINAV--SEAGA--TTRQQAAA 147 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHH------HHHHHHHh--hhccc--ccHHHHHH
Confidence 9999999999999999999999999999999999975322110000000 00000000 00000 00000000
Q ss_pred HHHhhhcCCCCCCCcchhhhhhcccCCCCCCCC-CCHH-HHHHHHHhhhcCCCcccccccccccccccCCCccccccccE
Q 021282 173 NIYILFSRSEIPIAPENKEIMDLVSDSTPLPPW-FTEE-DLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPA 250 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 250 (314)
. +.. . ... ...............+ +... .... +.... .......+++|+
T Consensus 148 ~-~~~--~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~---~~~~~~~~~~P~ 198 (255)
T PRK10673 148 I-MRQ--H----LNE--EGVIQFLLKSFVDGEWRFNVPVLWDQ-----------------YPHIV---GWEKIPAWPHPA 198 (255)
T ss_pred H-HHH--h----cCC--HHHHHHHHhcCCcceeEeeHHHHHHh-----------------HHHHh---CCcccCCCCCCe
Confidence 0 000 0 000 0000000000000000 0000 0000 00000 001111589999
Q ss_pred EEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 251 LLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 251 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
|+|+|++|..++... ...+.+.+|++++.+++++||++++|+|++|++.|.+||.++
T Consensus 199 l~i~G~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 199 LFIRGGNSPYVTEAY------RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred EEEECCCCCCCCHHH------HHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 999999998876432 223556789999999999999999999999999999999764
No 16
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=9e-34 Score=238.07 Aligned_cols=252 Identities=19% Similarity=0.244 Sum_probs=150.9
Q ss_pred EEEEEeccCCCCC-ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 021282 15 NLHIAEAGADADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 93 (314)
Q Consensus 15 ~i~~~~~g~~~~~-p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l 93 (314)
+++|...|+ | |+||||||+++++..|..++..|.+ +|+|+++|+||||.|+.+ ..++++++++++.+ +
T Consensus 3 ~~~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~l~~----~ 71 (256)
T PRK10349 3 NIWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF---GALSLADMAEAVLQ----Q 71 (256)
T ss_pred ccchhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCC---CCCCHHHHHHHHHh----c
Confidence 478888886 5 4799999999999999999988865 699999999999999754 24788888877653 5
Q ss_pred CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHH
Q 021282 94 GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRN 173 (314)
Q Consensus 94 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (314)
+++++++|||||||.+|+.+|.++|++|+++|++++++.......... ... .....+. .... .......+.
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~-~~~~~~~------~~~~-~~~~~~~~~ 142 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKP-DVLAGFQ------QQLS-DDFQRTVER 142 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccH-HHHHHHH------HHHH-hchHHHHHH
Confidence 678999999999999999999999999999999986422110000000 000 0000000 0000 000011111
Q ss_pred HHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEE
Q 021282 174 IYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLI 253 (314)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 253 (314)
++................+....... ..+ ...........+. . .+.. ....+|++||++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-------------~--~~~~-~~l~~i~~P~lii 202 (256)
T PRK10349 143 FLALQTMGTETARQDARALKKTVLAL-PMP---EVDVLNGGLEILK-------------T--VDLR-QPLQNVSMPFLRL 202 (256)
T ss_pred HHHHHHccCchHHHHHHHHHHHhhcc-CCC---cHHHHHHHHHHHH-------------h--CccH-HHHhhcCCCeEEE
Confidence 10000000000000000000000000 000 0000000000000 0 0000 0111689999999
Q ss_pred ecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 254 MGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 254 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
+|++|.+++.+.. ..+.+.+|+++++++|++||++++|+|++|++.|..|-++
T Consensus 203 ~G~~D~~~~~~~~------~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 203 YGYLDGLVPRKVV------PMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred ecCCCccCCHHHH------HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999998865322 2345678999999999999999999999999999998543
No 17
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=8.6e-33 Score=230.14 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=90.4
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCch
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~G 106 (314)
+|+|||+||+++++..|..+++.| + +|+||++|+||||.|+.+. ..+++++++|+.+++++++++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 689999999999999999999877 4 6999999999999998754 3489999999999999999999999999999
Q ss_pred HHHHHHHHHhcccc-eeeeEEecCC
Q 021282 107 ALTAYMFAIQHQER-VSGVITLGVP 130 (314)
Q Consensus 107 g~va~~~a~~~p~~-v~~lvl~~~~ 130 (314)
|.+|+.+|.++|+. |+++++++++
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCC
Confidence 99999999999764 9999988754
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.6e-33 Score=244.58 Aligned_cols=120 Identities=26% Similarity=0.345 Sum_probs=100.5
Q ss_pred ceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChh------------chHHHHH---HHhhCCcEEEEeCCCCCCCCC
Q 021282 5 EHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWY------------SWRHQMV---GVATAGFRAIAPDCRGYGLSD 69 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~------------~~~~~~~---~l~~~~~~vi~~D~~G~G~S~ 69 (314)
...+.+++|.+++|...|+. ++|+|||||+.++.. .|.+++. .|..++|+||++|+||||.|.
T Consensus 37 ~~~~~~~~~~~l~y~~~G~~--~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~ 114 (343)
T PRK08775 37 SMRHAGLEDLRLRYELIGPA--GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL 114 (343)
T ss_pred eecCCCCCCceEEEEEeccC--CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC
Confidence 34556679999999999852 557888877776655 6888886 464457999999999999884
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCceE-EEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 70 PPAEPEKTSFQDMVDDLLAILDHLGLAKV-FLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 70 ~~~~~~~~~~~~~a~d~~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
. ..+++.++++|+.+++++|+++++ +||||||||+||+.+|.++|++|+++|++++.
T Consensus 115 ~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 115 D----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred C----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 2 247889999999999999999875 79999999999999999999999999999864
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=8.5e-32 Score=233.75 Aligned_cols=125 Identities=21% Similarity=0.281 Sum_probs=108.5
Q ss_pred eeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC----CCCCHHH
Q 021282 6 HKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP----EKTSFQD 81 (314)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~ 81 (314)
..++..+|++++|..++....+++|||+||++++...|..++..+++.||+|+++|+||||.|+.+... ..+++++
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 345667999999999875334679999999999999999898888888999999999999999764221 2358999
Q ss_pred HHHHHHHHHHHh----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 82 MVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 82 ~a~d~~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+++|+.++++.+ +..+++++||||||.+++.+|+++|++++++|++++.
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 999999999987 6789999999999999999999999999999998754
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=9.1e-32 Score=228.91 Aligned_cols=124 Identities=23% Similarity=0.417 Sum_probs=103.3
Q ss_pred eeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhh-CCcEEEEeCCCCCCCCCCCCCCC-CCCHHHHHH
Q 021282 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVD 84 (314)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~a~ 84 (314)
++++++|.++.|...++...+|+|||+||++++...|...+..++. .||+|+++|+||||.|+.+.... .++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 3678888899998877533478999999987766555444444444 48999999999999998654322 479999999
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|+.+++++++.++++++||||||.+++.+|.++|+++++++++++.
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 9999999999999999999999999999999999999999998754
No 21
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=2e-32 Score=238.98 Aligned_cols=122 Identities=16% Similarity=0.282 Sum_probs=95.0
Q ss_pred eeeCCEEEEEEeccCC-CCC-ceEEEEcCCCCChhchHHHH---HHHhhCCcEEEEeCCCCCCCCCCCCCC-CCCCHHH-
Q 021282 9 IKVQGLNLHIAEAGAD-ADA-HVVVFLHGFPEIWYSWRHQM---VGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQD- 81 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~~-~~~-p~vlllHG~~~~~~~~~~~~---~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~- 81 (314)
.+++|++++|...|+. +++ |+|||+||++++...|..++ +.|...+|+||++|+||||.|+.+... ..|+++.
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 3468899999999862 233 56777777777877786543 356556799999999999999865321 2345443
Q ss_pred ----HHHHHHH----HHHHhCCce-EEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 82 ----MVDDLLA----ILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 82 ----~a~d~~~----~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+++|+.+ ++++|++++ ++||||||||+||+.+|+++|++|+++|++++.
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 5777765 778999999 589999999999999999999999999999864
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4.9e-31 Score=230.93 Aligned_cols=121 Identities=21% Similarity=0.350 Sum_probs=103.0
Q ss_pred eeeCCEEEEEEeccCC--CCCceEEEEcCCCCChhc-hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021282 9 IKVQGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~~--~~~p~vlllHG~~~~~~~-~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 85 (314)
++.+|.+++|..+++. +.+++|||+||++++... |..++..|.+.||+|+++|+||||.|+.+. ...++++++++|
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~d 145 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-GYIPSFDDLVDD 145 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-CCcCCHHHHHHH
Confidence 4459999999988752 235789999999988764 678888888779999999999999998642 233589999999
Q ss_pred HHHHHHHhCCc------eEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 86 LLAILDHLGLA------KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 86 ~~~~~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.++++.+..+ +++|+||||||.||+.+|.++|++++++|++++.
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 99999988653 7999999999999999999999999999999853
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.1e-31 Score=224.77 Aligned_cols=256 Identities=21% Similarity=0.322 Sum_probs=157.5
Q ss_pred EEEEeccCC-CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021282 16 LHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 16 i~~~~~g~~-~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~ 94 (314)
++|...|+. +++|+|||+||+++++..|..++..|. ++|+|+++|+||||.|+.+. ...++++++++++.++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGEL-PPGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHhC
Confidence 467777742 347899999999999999998887775 47999999999999998653 346899999999999999999
Q ss_pred CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHH
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 174 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (314)
.++++++||||||.+|+.+|+++|++++++|++++.... .+...... .. . ..+... ..........
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~~~-~~--~-~~~~~~---------~~~~~~~~~~ 144 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRRCF-DV--R-IALLQH---------AGPEAYVHAQ 144 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHHHH-HH--H-HHHHhc---------cCcchhhhhh
Confidence 999999999999999999999999999999998753221 11000000 00 0 000000 0000000000
Q ss_pred HhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEEe
Q 021282 175 YILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIM 254 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 254 (314)
......... .........+.... ........... ...+.. ... .... .....+++|+++++
T Consensus 145 ~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~----------~~~--~~~~-~~~~~i~~P~l~i~ 205 (257)
T TIGR03611 145 ALFLYPADW-ISENAARLAADEAH--ALAHFPGKANV---LRRINA----------LEA--FDVS-ARLDRIQHPVLLIA 205 (257)
T ss_pred hhhhccccH-hhccchhhhhhhhh--cccccCccHHH---HHHHHH----------HHc--CCcH-HHhcccCccEEEEe
Confidence 000000000 00000000000000 00000000000 000000 000 0000 01116899999999
Q ss_pred cCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 255 GDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 255 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
|++|.+++.+... ++.+.+|+++++.++++||++++|+|++|++.|.+||++
T Consensus 206 g~~D~~~~~~~~~------~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 206 NRDDMLVPYTQSL------RLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred cCcCcccCHHHHH------HHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999998754332 344567899999999999999999999999999999963
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.98 E-value=3.3e-31 Score=220.69 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=158.9
Q ss_pred EEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021282 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 15 ~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~ 94 (314)
+++|...|+++++|+|||+||++++...|..+++.|. .+|+|+++|+||||.|+.+. ..+++.++++|+.++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC
Confidence 3678888864467899999999999999999888775 58999999999999997643 35799999999999999999
Q ss_pred CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHH
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 174 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (314)
.++++++||||||.+++.+|.++|++++++++++++.....+..+... ...+.. ..........
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~------~~~~~~----------~~~~~~~~~~ 141 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR------IAAVRA----------EGLAALADAV 141 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH------Hhhhhh----------ccHHHHHHHH
Confidence 999999999999999999999999999999998754321111100000 000000 0000000000
Q ss_pred HhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCccccccccccccc-ccCCCccccccccEEEE
Q 021282 175 YILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRE-NFSTPEVIAVKVPALLI 253 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~lii 253 (314)
...+....... .. ......+...+....... ....+..... ... ....++++|++++
T Consensus 142 ~~~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~Pvlii 199 (251)
T TIGR02427 142 LERWFTPGFRE-AH-------------------PARLDLYRNMLVRQPPDG-YAGCCAAIRDADFR-DRLGAIAVPTLCI 199 (251)
T ss_pred HHHHccccccc-CC-------------------hHHHHHHHHHHHhcCHHH-HHHHHHHHhcccHH-HHhhhcCCCeEEE
Confidence 00000000000 00 000001110000000000 0000000000 000 0111589999999
Q ss_pred ecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 254 MGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 254 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
+|++|..++.+... .+.+..++.++++++++||+++.|+|+++++.|.+|+.
T Consensus 200 ~g~~D~~~~~~~~~------~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 200 AGDQDGSTPPELVR------EIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EeccCCcCChHHHH------HHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999998754332 24455788999999999999999999999999999974
No 25
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=3.3e-31 Score=233.83 Aligned_cols=123 Identities=19% Similarity=0.287 Sum_probs=100.6
Q ss_pred eeeCCEEEEEEeccCC--CCCceEEEEcCCCCChhc-------------hHHHHH---HHhhCCcEEEEeCCCCC-CCCC
Q 021282 9 IKVQGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGY-GLSD 69 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~~--~~~p~vlllHG~~~~~~~-------------~~~~~~---~l~~~~~~vi~~D~~G~-G~S~ 69 (314)
.+++|++++|...|+. .++|+|||+||++++... |+.++. .|...+|+||++|+||+ |.|+
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 4468889999999952 236999999999999984 776652 44456899999999993 5453
Q ss_pred CCCC------------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 70 PPAE------------PEKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 70 ~~~~------------~~~~~~~~~a~d~~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
.+.. ...|+++++++++.+++++|++++ ++|+||||||.+++.+|.++|++|+++|++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 3210 025899999999999999999999 5999999999999999999999999999998643
No 26
>PHA02857 monoglyceride lipase; Provisional
Probab=99.98 E-value=1.7e-30 Score=220.59 Aligned_cols=122 Identities=16% Similarity=0.145 Sum_probs=99.6
Q ss_pred eeeeCCEEEEEEeccCC-CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021282 8 FIKVQGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (314)
Q Consensus 8 ~~~~~g~~i~~~~~g~~-~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~ 86 (314)
++.-||.+|+|..+-+. ...+.|+|+||+++++..|..++..|..+||+|+++|+||||.|+... ....++..+++|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHH
Confidence 45569999999875442 224567777999999999999999998889999999999999997532 2224667777888
Q ss_pred HHHHHHh----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 87 LAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 87 ~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.+.++.+ ..++++|+||||||.+|+.+|.++|++++++|++++.
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 8777664 3468999999999999999999999999999999864
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.98 E-value=1.7e-31 Score=228.55 Aligned_cols=104 Identities=27% Similarity=0.419 Sum_probs=93.9
Q ss_pred CCCceEEEEcCCCCChhchHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEe
Q 021282 25 ADAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAK 103 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGh 103 (314)
.++||||++|||+++...|+.++..|... |++|+++|++|||.|++.+....|+...+++.+.+++...+.+++++|||
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvgh 135 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGH 135 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEe
Confidence 36899999999999999999999877654 39999999999996666555566999999999999999999999999999
Q ss_pred CchHHHHHHHHHhcccceeeeEEec
Q 021282 104 DFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 104 S~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
|+||.+|..+|+.+|+.|+++++++
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLD 160 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeec
Confidence 9999999999999999999999554
No 28
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=1.9e-31 Score=233.61 Aligned_cols=123 Identities=20% Similarity=0.354 Sum_probs=102.2
Q ss_pred eeeCCEEEEEEeccC--CCCCceEEEEcCCCCChh-----------chHHHHH---HHhhCCcEEEEeCCCC--CCCCCC
Q 021282 9 IKVQGLNLHIAEAGA--DADAHVVVFLHGFPEIWY-----------SWRHQMV---GVATAGFRAIAPDCRG--YGLSDP 70 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~--~~~~p~vlllHG~~~~~~-----------~~~~~~~---~l~~~~~~vi~~D~~G--~G~S~~ 70 (314)
..++|++|+|..+|+ ...+|+|||+||++++++ .|+.++. .|..++|+||++|+|| ||.|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 356889999999995 123689999999999763 4887752 5656789999999999 666643
Q ss_pred CC---C-------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 71 PA---E-------PEKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 71 ~~---~-------~~~~~~~~~a~d~~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
.. . ...|+++++++|+.++++++++++ ++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 10 0 124899999999999999999999 9999999999999999999999999999998754
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=2.7e-30 Score=218.13 Aligned_cols=117 Identities=17% Similarity=0.303 Sum_probs=102.1
Q ss_pred eCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021282 11 VQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL 90 (314)
Q Consensus 11 ~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~ 90 (314)
-+|-+++|...+ +++|+|||+||++.+...|..++..|.+.||+|+++|+||||.|..... ..++++++++++.+++
T Consensus 4 ~~~~~~~~~~~~--~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 4 ENGEEVTDMKPN--RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccccccccc--CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHH
Confidence 477888888743 2479999999999999999999988877799999999999999854321 3479999999999999
Q ss_pred HHhC-CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 91 DHLG-LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 91 ~~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.++ .++++||||||||.++..++.++|++|+++|++++.
T Consensus 81 ~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 81 SSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred HhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 9995 589999999999999999999999999999999754
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.7e-30 Score=211.16 Aligned_cols=129 Identities=22% Similarity=0.356 Sum_probs=106.7
Q ss_pred ceeeeee-CCEEEEEEeccCC-CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCC--CHH
Q 021282 5 EHKFIKV-QGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT--SFQ 80 (314)
Q Consensus 5 ~~~~~~~-~g~~i~~~~~g~~-~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~--~~~ 80 (314)
+.+++.+ ++..++..+.... .+++|+||+||+++....|-..+..|+. .++|+++|++|+|.|++|.-...+ ...
T Consensus 66 ~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~ 144 (365)
T KOG4409|consen 66 SKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEK 144 (365)
T ss_pred ceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchH
Confidence 3456666 6666666554432 4679999999999999999999999976 799999999999999998533222 345
Q ss_pred HHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCC
Q 021282 81 DMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPP 134 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 134 (314)
.+++-+.+-....+++|.+|||||+||++|..||.+||++|+.|+|+++.-++.
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 788888888889999999999999999999999999999999999999755543
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.2e-29 Score=224.84 Aligned_cols=115 Identities=24% Similarity=0.321 Sum_probs=95.1
Q ss_pred EEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHH
Q 021282 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTS----FQDMVDDLLAIL 90 (314)
Q Consensus 15 ~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~----~~~~a~d~~~~~ 90 (314)
++++.....++++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+... ..+ .+.+++++.+++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT-CKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc-cccHHHHHHHHHHHHHHHH
Confidence 66665544335679999999999999999888888865 699999999999999865321 112 224677888999
Q ss_pred HHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 91 DHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 91 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
+.+++++++|+||||||.+|+.+|.++|++|+++|+++++.
T Consensus 171 ~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 171 KAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 99999999999999999999999999999999999998643
No 32
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5.3e-30 Score=222.96 Aligned_cols=124 Identities=18% Similarity=0.322 Sum_probs=100.1
Q ss_pred eeeee-eCCEEEEEEeccCCC---CCceEEEEcCCCCCh-hchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHH
Q 021282 6 HKFIK-VQGLNLHIAEAGADA---DAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQ 80 (314)
Q Consensus 6 ~~~~~-~~g~~i~~~~~g~~~---~~p~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (314)
..+++ .||.+|+|..++... .+++|||+||++.+. ..|...+..|.+.||+|+++|+||||.|+.+. ....+++
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~ 112 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR-AYVPNVD 112 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc-ccCCCHH
Confidence 33444 499999998876422 245699999998764 34555666788889999999999999997542 2245889
Q ss_pred HHHHHHHHHHHHhCC------ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 81 DMVDDLLAILDHLGL------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.+++|+.++++.+.. .+++|+||||||.+|+.++.++|++|+++|++++.
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 999999999998854 36999999999999999999999999999999764
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=6e-30 Score=212.44 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=141.8
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchH
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg 107 (314)
|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.. ..++++++++++.+++ .++++++||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF---GPLSLADAAEAIAAQA----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC---CCcCHHHHHHHHHHhC----CCCeEEEEEcHHH
Confidence 8999999999999999999988864 799999999999999754 2468888888877654 2699999999999
Q ss_pred HHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHHHhhhcCCCCCCCc
Q 021282 108 LTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAP 187 (314)
Q Consensus 108 ~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (314)
.+++.+|.++|+++.++|++++.........+...... .....+.. .+ ..........++............
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKP-DVLTGFQQ------QL-SDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCH-HHHHHHHH------Hh-hhhHHHHHHHHHHHHHhcCCccch
Confidence 99999999999999999999764321110000000000 00000000 00 000000011100000000000000
Q ss_pred chhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEEecCCCcccCCCCch
Q 021282 188 ENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIE 267 (314)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~ 267 (314)
....+....... ..+ ....+.. .+.. +.. ... .....+|++|+++++|++|..++....
T Consensus 149 ~~~~~~~~~~~~-~~~---~~~~~~~---~~~~----------~~~--~~~-~~~l~~i~~Pvlii~g~~D~~~~~~~~- 207 (245)
T TIGR01738 149 DARALKQTLLAR-PTP---NVQVLQA---GLEI----------LAT--VDL-RQPLQNISVPFLRLYGYLDGLVPAKVV- 207 (245)
T ss_pred HHHHHHHHhhcc-CCC---CHHHHHH---HHHH----------hhc--ccH-HHHHhcCCCCEEEEeecCCcccCHHHH-
Confidence 000000000000 000 0000000 0000 000 000 001116899999999999998875322
Q ss_pred hhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHH
Q 021282 268 DYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFL 310 (314)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 310 (314)
..+.+..|+++++++|++||+++.|+|++|++.|.+|+
T Consensus 208 -----~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 208 -----PYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred -----HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 23455679999999999999999999999999999996
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1e-29 Score=224.81 Aligned_cols=260 Identities=23% Similarity=0.380 Sum_probs=163.7
Q ss_pred eeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021282 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (314)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~ 86 (314)
..+..++.+++|...|+ +++|+|||+||++++...|..++..|.. +|+|+++|+||||.|.... ..+++.++++++
T Consensus 112 ~~~~~~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~ 187 (371)
T PRK14875 112 RKARIGGRTVRYLRLGE-GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAV 187 (371)
T ss_pred CcceEcCcEEEEecccC-CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 45677888999998885 4579999999999999999999888865 5999999999999996543 357899999999
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhccccc
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLD 166 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
.++++.++.++++|+||||||.+|+.+|.++|+++.++++++++...+... . .+...+....... .
T Consensus 188 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~-------~-~~~~~~~~~~~~~------~ 253 (371)
T PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN-------G-DYIDGFVAAESRR------E 253 (371)
T ss_pred HHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc-------h-hHHHHhhcccchh------H
Confidence 999999999999999999999999999999999999999997643211100 0 0000000000000 0
Q ss_pred HHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccc
Q 021282 167 AKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAV 246 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (314)
....+.. .+.... ... ..+.+........ .. ....+....... +...... + ... .....+
T Consensus 254 ~~~~~~~---~~~~~~-~~~---~~~~~~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~-~-----~~~-~~l~~i 313 (371)
T PRK14875 254 LKPVLEL---LFADPA-LVT---RQMVEDLLKYKRL-DG-VDDALRALADAL----FAGGRQR-V-----DLR-DRLASL 313 (371)
T ss_pred HHHHHHH---HhcChh-hCC---HHHHHHHHHHhcc-cc-HHHHHHHHHHHh----ccCcccc-h-----hHH-HHHhcC
Confidence 0000110 000000 000 0000000000000 00 000000000000 0000000 0 000 001158
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
+||+++++|++|.+++.... +...+++++.+++++||++++|+|+++++.|.+||+++
T Consensus 314 ~~Pvlii~g~~D~~vp~~~~---------~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 314 AIPVLVIWGEQDRIIPAAHA---------QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCCEEEEEECCCCccCHHHH---------hhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 99999999999998864321 22345689999999999999999999999999999753
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=9e-30 Score=211.73 Aligned_cols=103 Identities=36% Similarity=0.569 Sum_probs=94.0
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCceEEEEEeCc
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD-LLAILDHLGLAKVFLVAKDF 105 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d-~~~~~~~l~~~~~~lvGhS~ 105 (314)
+|+|||+||++++...|..++..|. ++|+|+++|+||||.|+.+.....+++++++++ +..+++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4799999999999999999999887 689999999999999987654456789999999 88899999999999999999
Q ss_pred hHHHHHHHHHhcccceeeeEEecCC
Q 021282 106 GALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 106 Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
||.+|+.+|.++|+++++++++++.
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCC
Confidence 9999999999999999999998764
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=3.7e-29 Score=215.24 Aligned_cols=127 Identities=26% Similarity=0.373 Sum_probs=106.7
Q ss_pred ccceeeeee-CCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 021282 3 QIEHKFIKV-QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (314)
Q Consensus 3 ~~~~~~~~~-~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (314)
+...+++++ +|.+++|...|+ ++++||||+||++++...+. ....+...+|+||++|+||||.|+.+.....++..+
T Consensus 3 ~~~~~~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~~~~-~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 3 PFVSGYLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGTDPG-CRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred CccCCeEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCCCHH-HHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 345667777 789999999885 45789999999988866543 334454568999999999999998654333578899
Q ss_pred HHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 82 ~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
+++|+..+++++++++++++||||||.+++.++.++|++|+++|++++..
T Consensus 81 ~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 81 LVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 99999999999999999999999999999999999999999999998653
No 37
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=3.3e-29 Score=234.30 Aligned_cols=123 Identities=24% Similarity=0.473 Sum_probs=104.3
Q ss_pred ceeeeeeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021282 5 EHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 84 (314)
...+++.+|.+|+|...|+ +++|+|||+||++++...|..+++.| .++|+|+++|+||||.|+.+.....|+++++++
T Consensus 4 ~~~~~~~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGD-PDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred eEEEEeeCCEEEEEEEcCC-CCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 3456778999999999986 45899999999999999999999888 568999999999999998765445689999999
Q ss_pred HHHHHHHHhCCce-EEEEEeCchHHHHHHHHHh--cccceeeeEEecC
Q 021282 85 DLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQ--HQERVSGVITLGV 129 (314)
Q Consensus 85 d~~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~--~p~~v~~lvl~~~ 129 (314)
|+.+++++++.++ ++|+||||||.+++.++.+ .|+++..++.+++
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 9999999999876 9999999999999988876 3456665555443
No 38
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=2.4e-30 Score=212.09 Aligned_cols=101 Identities=41% Similarity=0.644 Sum_probs=92.3
Q ss_pred EEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHH
Q 021282 30 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 109 (314)
Q Consensus 30 vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~v 109 (314)
|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.....++++++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999884 799999999999999987653345799999999999999999999999999999999
Q ss_pred HHHHHHhcccceeeeEEecCCC
Q 021282 110 AYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 110 a~~~a~~~p~~v~~lvl~~~~~ 131 (314)
++.++.++|++|+++|+++++.
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESS
T ss_pred ccccccccccccccceeecccc
Confidence 9999999999999999998653
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=2.5e-28 Score=246.65 Aligned_cols=114 Identities=27% Similarity=0.433 Sum_probs=99.9
Q ss_pred EEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC------CCCCCHHHHHHHHHHH
Q 021282 16 LHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE------PEKTSFQDMVDDLLAI 89 (314)
Q Consensus 16 i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~a~d~~~~ 89 (314)
++|...|+.+++|+|||+||++++...|..++..|.. +|+||++|+||||.|+.+.. ...++++.+++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 4566677544578999999999999999999988865 69999999999999976421 2357899999999999
Q ss_pred HHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 90 LDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 90 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
++++++++++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 99999999999999999999999999999999999998753
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=1.9e-28 Score=185.91 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=164.8
Q ss_pred eeeeeeCCEEEEEEeccCCCCCceEEEEcCCC-CChhchHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCC-CHHHH
Q 021282 6 HKFIKVQGLNLHIAEAGADADAHVVVFLHGFP-EIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKT-SFQDM 82 (314)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~p~vlllHG~~-~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~-~~~~~ 82 (314)
+..+.++|.+|+|...|.. --.||++.|.- +....|.+++..|... .++||++|.||||.|.+|...... -+..-
T Consensus 23 e~kv~vng~ql~y~~~G~G--~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHG--PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred hheeeecCceeeeeecCCC--CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 4568889999999999972 23799999975 5577899988876544 499999999999999987543211 24556
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcch-hhhhccCccchhhh
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGF-YISRWQEPGRAEAD 161 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 161 (314)
|++..++|++|..+++.++|||=||..|+..|+++++.|.++++.++..-.... .. .+-++. .+..|....+
T Consensus 101 a~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~-~~--ma~kgiRdv~kWs~r~R---- 173 (277)
T KOG2984|consen 101 AEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHL-GA--MAFKGIRDVNKWSARGR---- 173 (277)
T ss_pred HHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecch-hH--HHHhchHHHhhhhhhhc----
Confidence 788889999999999999999999999999999999999999998753211000 00 000000 0111111000
Q ss_pred cccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHH----HHHHHH----hhhcCCCcccccccccc
Q 021282 162 FGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEED----LAAYGA----LYEKSGFRTALQVPYRT 233 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~ 233 (314)
.-... -...+. ++.+.. ....++
T Consensus 174 -------~P~e~-------------------------------~Yg~e~f~~~wa~wvD~v~qf~~~~d----------- 204 (277)
T KOG2984|consen 174 -------QPYED-------------------------------HYGPETFRTQWAAWVDVVDQFHSFCD----------- 204 (277)
T ss_pred -------chHHH-------------------------------hcCHHHHHHHHHHHHHHHHHHhhcCC-----------
Confidence 00000 001111 111111 111110
Q ss_pred cccccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 234 LRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 234 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
-..+....+ +++||++|++|+.|++++.+.+ -....+.+.+++.++|+++|.+++.-|++|+..+.+||++.
T Consensus 205 -G~fCr~~lp-~vkcPtli~hG~kDp~~~~~hv------~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 205 -GRFCRLVLP-QVKCPTLIMHGGKDPFCGDPHV------CFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred -CchHhhhcc-cccCCeeEeeCCcCCCCCCCCc------cchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 001222333 7999999999999999975543 23455678999999999999999999999999999999875
Q ss_pred C
Q 021282 314 V 314 (314)
Q Consensus 314 ~ 314 (314)
+
T Consensus 277 ~ 277 (277)
T KOG2984|consen 277 E 277 (277)
T ss_pred C
Confidence 4
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4e-27 Score=207.26 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=97.3
Q ss_pred CCEEEEEEeccCC--CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021282 12 QGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 89 (314)
Q Consensus 12 ~g~~i~~~~~g~~--~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~ 89 (314)
++..++|..+.+. +..++|||+||++++...|..++..|.+.||+|+++|+||||.|+... ...++++.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH-GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCcCHHHHHHHHHHH
Confidence 6678888877652 234689999999999999999999998889999999999999998642 2345888999999999
Q ss_pred HHHhCC----ceEEEEEeCchHHHHHHHHHhccc---ceeeeEEecCC
Q 021282 90 LDHLGL----AKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVP 130 (314)
Q Consensus 90 ~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~ 130 (314)
++.+.. .+++++||||||.+++.++. +|+ +++++|+.++.
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPA 244 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcc
Confidence 998863 37999999999999997764 664 89999998754
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=1.4e-26 Score=196.33 Aligned_cols=128 Identities=28% Similarity=0.381 Sum_probs=108.9
Q ss_pred ceeeeeeCCEEEEEEeccCCCCC-ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHH
Q 021282 5 EHKFIKVQGLNLHIAEAGADADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~-p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a 83 (314)
+..+...||.+++|..+-..... -.||++||+.+++..|..++..|...||.|+++|+||||.|.....+..-++.++.
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 34566679999999987753222 58999999999999999999999999999999999999999732233344699999
Q ss_pred HHHHHHHHHhCC----ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 84 DDLLAILDHLGL----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 84 ~d~~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
+|+.++++.... .+++|+||||||.|++.++.+++.+++++||+++...
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~ 143 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALG 143 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECcccc
Confidence 999999998863 6899999999999999999999999999999876543
No 43
>PLN02511 hydrolase
Probab=99.94 E-value=3.3e-26 Score=202.13 Aligned_cols=122 Identities=22% Similarity=0.360 Sum_probs=92.4
Q ss_pred eeeee-CCEEEEEE-ec----cCCCCCceEEEEcCCCCChhc-h-HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 021282 7 KFIKV-QGLNLHIA-EA----GADADAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (314)
Q Consensus 7 ~~~~~-~g~~i~~~-~~----g~~~~~p~vlllHG~~~~~~~-~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (314)
..+++ ||..+.+. .. ....++|+|||+||+.+++.. | ...+..+.++||+|+++|+||||.|.... +..|
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-~~~~- 151 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-PQFY- 151 (388)
T ss_pred EEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-cCEE-
Confidence 44555 77777652 11 112357899999999877654 5 45666677789999999999999997542 2222
Q ss_pred HHHHHHHHHHHHHHhCC----ceEEEEEeCchHHHHHHHHHhcccc--eeeeEEecCC
Q 021282 79 FQDMVDDLLAILDHLGL----AKVFLVAKDFGALTAYMFAIQHQER--VSGVITLGVP 130 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lvl~~~~ 130 (314)
...+++|+.++++.++. .++++|||||||.+++.++.++|++ |.++++++++
T Consensus 152 ~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p 209 (388)
T PLN02511 152 SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNP 209 (388)
T ss_pred cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCC
Confidence 35778899999998876 5899999999999999999999987 8888877654
No 44
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=2.5e-25 Score=183.47 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=155.1
Q ss_pred CCCceEEEEcCCCCChhchHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CceEE
Q 021282 25 ADAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG----LAKVF 99 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~----~~~~~ 99 (314)
...||++++||+.++..+|..+...|..+ +..|++.|+|.||.|.... .++...+|+|+..|++..+ ..++.
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCce
Confidence 45799999999999999999998888755 7899999999999996543 4678999999999999884 67899
Q ss_pred EEEeCchH-HHHHHHHHhcccceeeeEEecCCCCC--CCCchhhhcCCcchhhhhcc---Cccc--hhhhcccccHHHHH
Q 021282 100 LVAKDFGA-LTAYMFAIQHQERVSGVITLGVPILP--PGPIEFHKYLPEGFYISRWQ---EPGR--AEADFGRLDAKTVV 171 (314)
Q Consensus 100 lvGhS~Gg-~va~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~ 171 (314)
++|||||| .+++..+..+|+++.++++++.++.. ........+.-.... .... ..++ ..+.+.....+..+
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~-~d~~~~~~~~rke~~~~l~~~~~d~~~ 205 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQ-LDLSIGVSRGRKEALKSLIEVGFDNLV 205 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHh-ccccccccccHHHHHHHHHHHhcchHH
Confidence 99999999 88888889999999999999864421 111111100000000 0000 0000 01111100001111
Q ss_pred HHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCC-CCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccE
Q 021282 172 RNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPW-FTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPA 250 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 250 (314)
+.+... . ..+ ........| .... .....+.... +..|.... ... ..+.||
T Consensus 206 ~~fi~~----n--l~~---------~~~~~s~~w~~nl~---~i~~~~~~~~-----~~s~~~~l-----~~~-~~~~pv 256 (315)
T KOG2382|consen 206 RQFILT----N--LKK---------SPSDGSFLWRVNLD---SIASLLDEYE-----ILSYWADL-----EDG-PYTGPV 256 (315)
T ss_pred HHHHHH----h--cCc---------CCCCCceEEEeCHH---HHHHHHHHHH-----hhcccccc-----ccc-ccccce
Confidence 110000 0 000 000000001 1111 1111111100 00011101 111 467899
Q ss_pred EEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhcC
Q 021282 251 LLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKHV 314 (314)
Q Consensus 251 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 314 (314)
+++.|.++..++.+. ..++.+..|.++++.+++|||++|.|+|++|.+.|.+|++.++
T Consensus 257 lfi~g~~S~fv~~~~------~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 257 LFIKGLQSKFVPDEH------YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred eEEecCCCCCcChhH------HHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999987532 2346678899999999999999999999999999999998653
No 45
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=7.1e-25 Score=192.26 Aligned_cols=120 Identities=16% Similarity=0.253 Sum_probs=96.9
Q ss_pred eCCEEEEEEeccCC-C-CCceEEEEcCCCCChhc-------------hHHHHH---HHhhCCcEEEEeCCCCCCCCCCC-
Q 021282 11 VQGLNLHIAEAGAD-A-DAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGYGLSDPP- 71 (314)
Q Consensus 11 ~~g~~i~~~~~g~~-~-~~p~vlllHG~~~~~~~-------------~~~~~~---~l~~~~~~vi~~D~~G~G~S~~~- 71 (314)
+..++++|+++|+. + ..+.||+.|++.++++. |+.++. .|....|.||++|..|-|.|+.|
T Consensus 38 l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 38 IPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 36788999999962 2 24799999999886532 776654 35455799999999998764211
Q ss_pred -----------C-------CCCCCCHHHHHHHHHHHHHHhCCceEE-EEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 72 -----------A-------EPEKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 72 -----------~-------~~~~~~~~~~a~d~~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
. ....+|+.++++++.+++++|++++++ +|||||||++|+.+|.++|++|+++|++++.
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1 122479999999999999999999997 9999999999999999999999999999764
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=1.7e-24 Score=187.66 Aligned_cols=122 Identities=17% Similarity=0.277 Sum_probs=95.0
Q ss_pred eeeCCEEEEEEeccCCCCCceEEEEcCCCCChh-ch-------------------------HHHHHHHhhCCcEEEEeCC
Q 021282 9 IKVQGLNLHIAEAGADADAHVVVFLHGFPEIWY-SW-------------------------RHQMVGVATAGFRAIAPDC 62 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~-~~-------------------------~~~~~~l~~~~~~vi~~D~ 62 (314)
...+|.+|++..+..+..+-.|+++||+++++. .+ ...++.|.+.||+|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 345899999988764322448999999999885 11 3467889889999999999
Q ss_pred CCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHhC------------------------CceEEEEEeCchHHHHHHHHHh
Q 021282 63 RGYGLSDPPAEPEK--TSFQDMVDDLLAILDHLG------------------------LAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 63 ~G~G~S~~~~~~~~--~~~~~~a~d~~~~~~~l~------------------------~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
||||.|+....... .+++++++|+.++++.+. -.+++|+||||||.+++.++.+
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 99999975422112 489999999999998752 2379999999999999999987
Q ss_pred ccc--------ceeeeEEecCC
Q 021282 117 HQE--------RVSGVITLGVP 130 (314)
Q Consensus 117 ~p~--------~v~~lvl~~~~ 130 (314)
+++ .++++|+++++
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred hccccccccccccceEEEeccc
Confidence 653 58888877654
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=2.1e-24 Score=166.84 Aligned_cols=225 Identities=19% Similarity=0.241 Sum_probs=143.7
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEe
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GLAKVFLVAK 103 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l---~~~~~~lvGh 103 (314)
+..|||||||.++.+..+.+...|.++||.|++|.+||||... ...-.++..+|..|+.+..+.| |.+.+.++|-
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~--e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLP--EDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCH--HHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 4799999999999999999999999999999999999999763 2223567888877777766655 6789999999
Q ss_pred CchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHHHhhhcCCCC
Q 021282 104 DFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEI 183 (314)
Q Consensus 104 S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (314)
||||.+|+.+|.++| ++++|.++++.......... ++. .. .+++ +-.+..
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~ii----e~~--l~------------------y~~~-~kk~e~--- 142 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIII----EGL--LE------------------YFRN-AKKYEG--- 142 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhhh----HHH--HH------------------HHHH-hhhccC---
Confidence 999999999999999 99999998765432211100 000 00 0000 000000
Q ss_pred CCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEEecCCCcccCC
Q 021282 184 PIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKF 263 (314)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 263 (314)
...+.+.+.+...... .+ .....+... ++....+. ..|..|++++.|++|..++.
T Consensus 143 ---k~~e~~~~e~~~~~~~-~~---~~~~~~~~~-------------i~~~~~~~-----~~I~~pt~vvq~~~D~mv~~ 197 (243)
T COG1647 143 ---KDQEQIDKEMKSYKDT-PM---TTTAQLKKL-------------IKDARRSL-----DKIYSPTLVVQGRQDEMVPA 197 (243)
T ss_pred ---CCHHHHHHHHHHhhcc-hH---HHHHHHHHH-------------HHHHHhhh-----hhcccchhheecccCCCCCH
Confidence 0000000000000000 00 000111110 11111111 15899999999999999986
Q ss_pred CCchhhhccccccccCCCceEEEeCCCCCCcccc-ChHHHHHHHHHHHhh
Q 021282 264 PGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQ-SPEEVNQLILTFLNK 312 (314)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 312 (314)
+.+.-+. .+......++.+++++||.+..+ .-+.+.+.|..||++
T Consensus 198 ~sA~~Iy----~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 198 ESANFIY----DHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHH----HhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 5444332 22333457999999999988875 578999999999974
No 48
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=3.6e-24 Score=173.82 Aligned_cols=124 Identities=23% Similarity=0.345 Sum_probs=101.7
Q ss_pred ceeeeee-CCEEEEEEeccCCCC---CceEEEEcCCCCCh-hchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCH
Q 021282 5 EHKFIKV-QGLNLHIAEAGADAD---AHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSF 79 (314)
Q Consensus 5 ~~~~~~~-~g~~i~~~~~g~~~~---~p~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 79 (314)
+..+++. +|.++.+..|-+..+ .-.|+++||+++.+ ..|...+..|+..||-|+++|++|||.|+.. ...--++
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl-~~yi~~~ 106 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL-HAYVPSF 106 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC-cccCCcH
Confidence 3445555 999999887775221 22699999999875 6777788889999999999999999999964 2344589
Q ss_pred HHHHHHHHHHHHHhC------CceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 80 QDMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+..++|+..+.+... ..+.+|.||||||.|++.++.++|+...++|++++
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaP 162 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAP 162 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeec
Confidence 999999999998642 23799999999999999999999999999999875
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=3.2e-23 Score=175.24 Aligned_cols=116 Identities=22% Similarity=0.283 Sum_probs=89.3
Q ss_pred eeCCEEEE-EEeccCCCCCceEEEEcCCCC----ChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021282 10 KVQGLNLH-IAEAGADADAHVVVFLHGFPE----IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 10 ~~~g~~i~-~~~~g~~~~~p~vlllHG~~~----~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 84 (314)
..+|.++. +......+++++||++||+++ +...|..++..|.+.||+|+++|+||||.|+.. .+++..+.+
T Consensus 8 ~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~~ 83 (274)
T TIGR03100 8 SCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGIDA 83 (274)
T ss_pred EcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHHH
Confidence 34665554 232222234678999998764 344566678888888999999999999999642 246778889
Q ss_pred HHHHHHHHh-----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 85 DLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 85 d~~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|+++++
T Consensus 84 d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~ 133 (274)
T TIGR03100 84 DIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPW 133 (274)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCc
Confidence 999988887 66789999999999999999875 5689999999864
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=5.8e-22 Score=171.69 Aligned_cols=123 Identities=14% Similarity=0.158 Sum_probs=84.7
Q ss_pred eeee-CCEEEEEE--eccC-CCCCceEEEEcCCCCChhc--hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCC---C
Q 021282 8 FIKV-QGLNLHIA--EAGA-DADAHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT---S 78 (314)
Q Consensus 8 ~~~~-~g~~i~~~--~~g~-~~~~p~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~---~ 78 (314)
.++. ||..+.+. ..++ .+++|+||++||++++... +..++..|.+.||+|+++|+||||.|.... ...| .
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~~~~ 113 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYHSGE 113 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceECCCc
Confidence 3555 77655432 2221 1346899999999987554 455777888899999999999999774321 1122 2
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccc--eeeeEEecCCC
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQER--VSGVITLGVPI 131 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lvl~~~~~ 131 (314)
..+....+..+.+.++.++++++||||||.++..+++.+++. +.++|+++++.
T Consensus 114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 333333333344456778999999999999999888887654 88989888653
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=5.4e-22 Score=176.20 Aligned_cols=230 Identities=16% Similarity=0.090 Sum_probs=140.0
Q ss_pred CCEEEEEEec-c-CCCCCceEEEEcCCCCCh-hchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021282 12 QGLNLHIAEA-G-ADADAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (314)
Q Consensus 12 ~g~~i~~~~~-g-~~~~~p~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~ 88 (314)
+|.+|..... . .++..|.||+.||+.+.. ..|...+..|++.||+|+++|+||||.|.... ...+.....+++.+
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld 254 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLN 254 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHH
Confidence 5546664332 2 112345666666665543 56887888898889999999999999996532 12344555666777
Q ss_pred HHHHh---CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccc
Q 021282 89 ILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRL 165 (314)
Q Consensus 89 ~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (314)
.+... +.+++.++||||||.+|+.+|..+|++++++|+++++... .+. .. ..+ ...
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~----~~~----~~---~~~----------~~~ 313 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT----LLT----DP---KRQ----------QQV 313 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch----hhc----ch---hhh----------hhc
Confidence 77665 5678999999999999999999999999999998765311 000 00 000 000
Q ss_pred cHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCcccc
Q 021282 166 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIA 245 (314)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.......+.. ..... ..+.+.+......+. +. . ...... +
T Consensus 314 --p~~~~~~la~--~lg~~--------------------~~~~~~l~~~l~~~s-------l~-------~-~~~l~~-~ 353 (414)
T PRK05077 314 --PEMYLDVLAS--RLGMH--------------------DASDEALRVELNRYS-------LK-------V-QGLLGR-R 353 (414)
T ss_pred --hHHHHHHHHH--HhCCC--------------------CCChHHHHHHhhhcc-------ch-------h-hhhhcc-C
Confidence 0000000000 00000 001111111100000 00 0 000001 5
Q ss_pred ccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 246 VKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 246 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
+++|+|+|+|++|.++|.+..+ .+.+..|+++++.+|++ ++.+.|+++++.|.+||.++
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~------~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSR------LIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHH------HHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 8999999999999999764332 33456789999999986 66789999999999999864
No 52
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=1.9e-22 Score=181.69 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=89.6
Q ss_pred CCceEEEEcCCCCChhchH-----HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 021282 26 DAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 100 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~l 100 (314)
.++|||++||+......|+ .++..|.++||+|+++|++|+|.|........|..+.+.+.+..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 5789999999998888886 68888999999999999999999866433345666777888888888899999999
Q ss_pred EEeCchHHHH---H-HHHHhc-ccceeeeEEecCCCC
Q 021282 101 VAKDFGALTA---Y-MFAIQH-QERVSGVITLGVPIL 132 (314)
Q Consensus 101 vGhS~Gg~va---~-~~a~~~-p~~v~~lvl~~~~~~ 132 (314)
+||||||.++ + .+++.+ |++++++++++++..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 9999999985 2 356665 889999999987644
No 53
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=3.8e-22 Score=175.09 Aligned_cols=127 Identities=19% Similarity=0.213 Sum_probs=96.1
Q ss_pred ccceeeeee-CCEEEEEEeccC------CCCCceEEEEcCCCCChhchH------HHHHHHhhCCcEEEEeCCCCCCCCC
Q 021282 3 QIEHKFIKV-QGLNLHIAEAGA------DADAHVVVFLHGFPEIWYSWR------HQMVGVATAGFRAIAPDCRGYGLSD 69 (314)
Q Consensus 3 ~~~~~~~~~-~g~~i~~~~~g~------~~~~p~vlllHG~~~~~~~~~------~~~~~l~~~~~~vi~~D~~G~G~S~ 69 (314)
+.|..++++ ||+.|....... ...+|+|||+||+..++..|. .++..|+++||+|+++|+||+|.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 345667777 999999866421 123689999999999998884 2344577889999999999988663
Q ss_pred CC-------CCCCCCCHHHHH-HHHHHHHHHh---CCceEEEEEeCchHHHHHHHHHhccc---ceeeeEEecCC
Q 021282 70 PP-------AEPEKTSFQDMV-DDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVP 130 (314)
Q Consensus 70 ~~-------~~~~~~~~~~~a-~d~~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~ 130 (314)
.. .....+++++++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|++++++++.
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 21 111247899999 8999999987 347999999999999998544 6786 67777877654
No 54
>PRK10566 esterase; Provisional
Probab=99.89 E-value=1.6e-21 Score=163.04 Aligned_cols=113 Identities=23% Similarity=0.292 Sum_probs=79.2
Q ss_pred EEEEeccC-CCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCC-----HHHHHHHHHHH
Q 021282 16 LHIAEAGA-DADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTS-----FQDMVDDLLAI 89 (314)
Q Consensus 16 i~~~~~g~-~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-----~~~~a~d~~~~ 89 (314)
++|.-.+. ++..|+||++||++++...|...+..|.++||+|+++|+||||.|.........+ +....+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 55554442 2346899999999999989998888898889999999999999864321111110 11223444444
Q ss_pred HHHh------CCceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 90 LDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 90 ~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
++.+ +.++++++||||||.+|+.+++++|+....+++++
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 4432 34689999999999999999999987555555444
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=8.7e-22 Score=157.22 Aligned_cols=120 Identities=20% Similarity=0.313 Sum_probs=97.1
Q ss_pred eeeCCE--EEEEEeccC-CCCCceEEEEcCCCCChhchHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021282 9 IKVQGL--NLHIAEAGA-DADAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 9 ~~~~g~--~i~~~~~g~-~~~~p~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 84 (314)
++++|. .++.+..++ ...||.++|+||++.+.-.|..++..+..+ ..+|+++|+||||.|....+ ...+.+.++.
T Consensus 53 v~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~K 131 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSK 131 (343)
T ss_pred cccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHH
Confidence 445443 366555554 346999999999999999999999888765 67999999999999976433 4689999999
Q ss_pred HHHHHHHHhC---CceEEEEEeCchHHHHHHHHHhc--ccceeeeEEecCC
Q 021282 85 DLLAILDHLG---LAKVFLVAKDFGALTAYMFAIQH--QERVSGVITLGVP 130 (314)
Q Consensus 85 d~~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lvl~~~~ 130 (314)
|+.++++++= ..+++||||||||.||...|... |. +.+++.||..
T Consensus 132 D~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 132 DFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999883 45799999999999999888754 76 8999999853
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.88 E-value=2.4e-21 Score=154.33 Aligned_cols=87 Identities=18% Similarity=0.194 Sum_probs=73.4
Q ss_pred ceEEEEcCCCCChhchHHH--HHHHhh--CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEe
Q 021282 28 HVVVFLHGFPEIWYSWRHQ--MVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAK 103 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~--~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGh 103 (314)
|+|||+|||+++...|... ...+.+ .+|+|+++|+|||| .++++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 6899999999999999853 233433 27999999999985 368889999999999999999999
Q ss_pred CchHHHHHHHHHhcccceeeeEEecCC
Q 021282 104 DFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 104 S~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
||||.+|+.+|.++|. ++|+++++
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCC
Confidence 9999999999999994 35777654
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=1.2e-20 Score=157.48 Aligned_cols=115 Identities=41% Similarity=0.671 Sum_probs=95.7
Q ss_pred eeCCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhC--CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 021282 10 KVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL 87 (314)
Q Consensus 10 ~~~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~ 87 (314)
...+..+.|...+.. +|+|+++||++++...|......+... .|+|+++|+||||.|. .. .++...+++++.
T Consensus 6 ~~~~~~~~~~~~~~~--~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~ 79 (282)
T COG0596 6 AADGVRLAYREAGGG--GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLA 79 (282)
T ss_pred cCCCeEEEEeecCCC--CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHH
Confidence 346677888887763 679999999999999998733333322 2899999999999997 11 345556699999
Q ss_pred HHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.+++.++.++++++||||||.++..++.++|+++++++++++.
T Consensus 80 ~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 80 ALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred HHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 9999999999999999999999999999999999999999864
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.87 E-value=5.9e-21 Score=167.21 Aligned_cols=116 Identities=13% Similarity=0.125 Sum_probs=88.6
Q ss_pred CCEEEEEEecc-CCCCCceEEEEcCCCCChhch-----HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021282 12 QGLNLHIAEAG-ADADAHVVVFLHGFPEIWYSW-----RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (314)
Q Consensus 12 ~g~~i~~~~~g-~~~~~p~vlllHG~~~~~~~~-----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 85 (314)
++.+++..... +...++|||++||+..+...| ..++..|++.||+|+++|++|+|.|+.. +++.+++.+
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~~~ 120 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYING 120 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHHHH
Confidence 45555544322 123457899999987655554 5788899999999999999999987532 466666533
Q ss_pred -H----HHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 86 -L----LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 86 -~----~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
+ ..+++..+.++++++||||||.+++.+++++|++++++|+++++..
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 3 3455566888999999999999999999999999999999987644
No 59
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=9.9e-23 Score=167.80 Aligned_cols=76 Identities=33% Similarity=0.541 Sum_probs=69.8
Q ss_pred cEEEEeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 55 FRAIAPDCRGYGLSDP--PAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 55 ~~vi~~D~~G~G~S~~--~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|+||++|+||+|.|++ ......|+..++++++..+++.+++++++++||||||.+++.+|+++|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7999999999999994 134457899999999999999999999999999999999999999999999999998754
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2.9e-20 Score=182.54 Aligned_cols=104 Identities=20% Similarity=0.278 Sum_probs=83.7
Q ss_pred CCCceEEEEcCCCCChhchHHH-----HHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCc
Q 021282 25 ADAHVVVFLHGFPEIWYSWRHQ-----MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLA 96 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~~-----~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~~~ 96 (314)
+.+|||||||||+.+...|+.+ ++.|.+.||+|+++| +|.|+.+.....+++.+++..+.+.++. +..+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 3579999999999999999975 677888899999999 5777665332235777777777666654 4457
Q ss_pred eEEEEEeCchHHHHHHHHHhc-ccceeeeEEecCCC
Q 021282 97 KVFLVAKDFGALTAYMFAIQH-QERVSGVITLGVPI 131 (314)
Q Consensus 97 ~~~lvGhS~Gg~va~~~a~~~-p~~v~~lvl~~~~~ 131 (314)
++++|||||||.+++.+|+.+ |++|+++|+++++.
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 999999999999999999865 56899999988764
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=8.4e-20 Score=152.54 Aligned_cols=118 Identities=21% Similarity=0.256 Sum_probs=88.6
Q ss_pred eeee-CCEEEEEEeccCC----CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCC-CCCCCCCCCCCCCHHH
Q 021282 8 FIKV-QGLNLHIAEAGAD----ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSFQD 81 (314)
Q Consensus 8 ~~~~-~g~~i~~~~~g~~----~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~~ 81 (314)
.+.+ +|.+|.-+..-+. +..++||++||++++...+...+..|.+.||.|+.+|.||| |.|+.... .+++..
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~--~~t~s~ 90 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID--EFTMSI 90 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc--cCcccc
Confidence 4555 8999986543331 23478999999999887788899999999999999999998 99965422 234444
Q ss_pred HHHHHHHHHHHh---CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 82 MVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 82 ~a~d~~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
..+|+.++++.+ +.+++.|+||||||.+|+..|+.. .++.+|+.++
T Consensus 91 g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp 139 (307)
T PRK13604 91 GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVG 139 (307)
T ss_pred cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCC
Confidence 567776555554 567899999999999997777643 3888886654
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=7.4e-20 Score=152.00 Aligned_cols=121 Identities=21% Similarity=0.208 Sum_probs=93.0
Q ss_pred eeee-CCEEEEEEeccCC-CCCceEEEEcCCCCC----hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHH
Q 021282 8 FIKV-QGLNLHIAEAGAD-ADAHVVVFLHGFPEI----WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (314)
Q Consensus 8 ~~~~-~g~~i~~~~~g~~-~~~p~vlllHG~~~~----~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (314)
|++. .|..+.+.....+ +..|+|||+|||+++ ...|..+++.|.+.||+|+++|+||||.|+.... .+++..
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~~ 81 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA--AARWDV 81 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc--cCCHHH
Confidence 4444 4444443433321 224789999999864 3467778888988899999999999999975432 357888
Q ss_pred HHHHHHHHH---HHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 82 MVDDLLAIL---DHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 82 ~a~d~~~~~---~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+++|+.+++ ++++.++++|+||||||.+++.+|.++|++++++|++++.
T Consensus 82 ~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 888877754 4456789999999999999999999999999999999753
No 63
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.80 E-value=5.1e-19 Score=146.66 Aligned_cols=129 Identities=22% Similarity=0.350 Sum_probs=107.5
Q ss_pred ccceeeeeeCCEEEEEEeccCC--C---CCceEEEEcCCCCChhchHHHHHHHhhC---------CcEEEEeCCCCCCCC
Q 021282 3 QIEHKFIKVQGLNLHIAEAGAD--A---DAHVVVFLHGFPEIWYSWRHQMVGVATA---------GFRAIAPDCRGYGLS 68 (314)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~--~---~~p~vlllHG~~~~~~~~~~~~~~l~~~---------~~~vi~~D~~G~G~S 68 (314)
++++-..++.|.+||+.+.-.. + +-.|||++||||++...|...++-|.+. -|.||+|.+||||.|
T Consensus 123 ~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS 202 (469)
T KOG2565|consen 123 QFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS 202 (469)
T ss_pred hhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC
Confidence 3445567789999999875532 1 1249999999999999998888766543 279999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 69 DPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 69 ~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
+.+.. -.++..+.|.-+..+|=.||.+++.+-|.+||+.|+..+|..+|++|.++-+..+...
T Consensus 203 d~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 203 DAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred cCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 98754 4678889999999999999999999999999999999999999999999987655443
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.78 E-value=2.6e-18 Score=131.26 Aligned_cols=93 Identities=25% Similarity=0.375 Sum_probs=75.4
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHH
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~ 108 (314)
+|||+||++++...|...+..|+++||.|+.+|+||+|.+... ....++.+++. .+..+.+++.++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 6999999999999999999999999999999999999988321 12333333332 1123678999999999999
Q ss_pred HHHHHHHhcccceeeeEEecC
Q 021282 109 TAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 109 va~~~a~~~p~~v~~lvl~~~ 129 (314)
+++.++.+. .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 78999998863
No 65
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.75 E-value=2e-17 Score=145.37 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=82.7
Q ss_pred CCceEEEEcCCCCCh--hchHH-HHHHHhh--CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 021282 26 DAHVVVFLHGFPEIW--YSWRH-QMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------G 94 (314)
Q Consensus 26 ~~p~vlllHG~~~~~--~~~~~-~~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l------~ 94 (314)
++|++|+||||+++. ..|.. ++..|.. .+|+||++|++|||.|..+.. ..+ ....++++.++++.| +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~~-t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AAY-TKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-ccc-HHHHHHHHHHHHHHHHHhhCCC
Confidence 579999999998754 46776 4444542 269999999999999865532 223 467788888888866 4
Q ss_pred CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+++++||||||||.||..++.++|++|.+|+++|++
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 789999999999999999999999999999999974
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.75 E-value=8.6e-17 Score=132.39 Aligned_cols=180 Identities=13% Similarity=0.105 Sum_probs=116.2
Q ss_pred CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC---------CCCC---CHHHHHHHHHHHH--
Q 021282 25 ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------PEKT---SFQDMVDDLLAIL-- 90 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------~~~~---~~~~~a~d~~~~~-- 90 (314)
+..|.|||+||++++...|..+++.|...++++..++.+|...+..... .... ++....+.+.+++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999999998876555555555666543221100 0011 1223333333333
Q ss_pred --HHhCC--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhccccc
Q 021282 91 --DHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLD 166 (314)
Q Consensus 91 --~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
+.+++ ++++|+|+|+||.+++.++.++|+.+.+++.+++..
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~----------------------------------- 138 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY----------------------------------- 138 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc-----------------------------------
Confidence 34444 479999999999999999999998888777543100
Q ss_pred HHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccc
Q 021282 167 AKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAV 246 (314)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (314)
. ..+ . .. ..
T Consensus 139 ------------~--~~~-------------~-------------------------------------------~~-~~ 147 (232)
T PRK11460 139 ------------A--SLP-------------E-------------------------------------------TA-PT 147 (232)
T ss_pred ------------c--ccc-------------c-------------------------------------------cc-cC
Confidence 0 000 0 00 23
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
+.|+++++|++|.++|.+....... .+++.-.+++++.++++||.+..+.-+...+.|..+|.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~--~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQE--ALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHH--HHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 5699999999999998755444322 233333457889999999999876666666666666643
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.74 E-value=4.3e-16 Score=131.86 Aligned_cols=121 Identities=17% Similarity=0.265 Sum_probs=85.1
Q ss_pred eeCCEEEEEEeccC----CCCCceEEEEcCCCCChhchHH--HHHHHhh-CCcEEEEeCC--CCCCCCCCCC--------
Q 021282 10 KVQGLNLHIAEAGA----DADAHVVVFLHGFPEIWYSWRH--QMVGVAT-AGFRAIAPDC--RGYGLSDPPA-------- 72 (314)
Q Consensus 10 ~~~g~~i~~~~~g~----~~~~p~vlllHG~~~~~~~~~~--~~~~l~~-~~~~vi~~D~--~G~G~S~~~~-------- 72 (314)
+.-+.++.|....+ ....|+|+|+||++++...|.. .+..+++ .|+.||+||. +|+|.+....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 33455555544332 1236899999999999988853 2345544 4899999998 5665432110
Q ss_pred ----------CCCCCCHHH-HHHHHHHHHHH---hCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 73 ----------EPEKTSFQD-MVDDLLAILDH---LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 73 ----------~~~~~~~~~-~a~d~~~~~~~---l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
....+++.. +++++..+++. ++.+++.++||||||.+|+.++.++|+++++++++++.
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 001234444 46888888887 45678999999999999999999999999999987654
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=99.71 E-value=1.3e-15 Score=129.23 Aligned_cols=105 Identities=16% Similarity=0.237 Sum_probs=76.1
Q ss_pred CCceEEEEcCCCCChhchHHH---HHHHhhCCcEEEEeCCCCCCC-----CCC---C----------C------CCCCCC
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQ---MVGVATAGFRAIAPDCRGYGL-----SDP---P----------A------EPEKTS 78 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~---~~~l~~~~~~vi~~D~~G~G~-----S~~---~----------~------~~~~~~ 78 (314)
..|.|+|+||++++...|... ...+...|+.||.+|.+++|. ++. . . ....+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 358999999999988877532 234555699999999987771 110 0 0 000122
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.+++.+.+.++.+.++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 3445555555556678889999999999999999999999999999988754
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.70 E-value=4.4e-15 Score=120.33 Aligned_cols=113 Identities=21% Similarity=0.363 Sum_probs=96.6
Q ss_pred EEEeccCCCCCc--eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021282 17 HIAEAGADADAH--VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 17 ~~~~~g~~~~~p--~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~ 94 (314)
-|.+..+ .+.| +||=+||-|+|...|+.+.+.|.+.|.|+|.+.+||+|.|..+.. ..|+-.+-..-+.++++.|+
T Consensus 24 ~y~D~~~-~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 24 VYEDSLP-SGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELG 101 (297)
T ss_pred EEEecCC-CCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcC
Confidence 3566554 2223 799999999999999999999999999999999999999987643 57888999999999999999
Q ss_pred Cc-eEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCC
Q 021282 95 LA-KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILP 133 (314)
Q Consensus 95 ~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 133 (314)
++ +.+.+|||+||-.|+.+|..+| +.++++++++-..
T Consensus 102 i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 102 IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 86 4788899999999999999996 6799999876443
No 70
>PLN00021 chlorophyllase
Probab=99.70 E-value=2.4e-15 Score=128.40 Aligned_cols=102 Identities=24% Similarity=0.302 Sum_probs=74.4
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceE
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKV 98 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~-------l~~~~~ 98 (314)
+.|+|||+||++.+...|..+++.|+..||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.+++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 46999999999999999999999999889999999999976432111 001122223333332222 344689
Q ss_pred EEEEeCchHHHHHHHHHhccc-----ceeeeEEecC
Q 021282 99 FLVAKDFGALTAYMFAIQHQE-----RVSGVITLGV 129 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p~-----~v~~lvl~~~ 129 (314)
+++||||||.+|+.+|.++|+ ++++++++++
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 999999999999999999885 5777777764
No 71
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.69 E-value=2.9e-16 Score=121.27 Aligned_cols=122 Identities=17% Similarity=0.233 Sum_probs=92.5
Q ss_pred ccceeeeee---CCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHH-hhCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 021282 3 QIEHKFIKV---QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGV-ATAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (314)
Q Consensus 3 ~~~~~~~~~---~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l-~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (314)
.+++..+++ |.++++.+..-++...|++|.+||..++....-+++.-+ ...+.+|..++.||||+|+..+..
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE---- 126 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE---- 126 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc----
Confidence 455555554 888888665445567899999999999988776665543 345899999999999999875432
Q ss_pred HHHHHHHHHHHHHHh------CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 79 FQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+.+.-|-.++++.| .-.|++|.|-|.||.+|+.+|++..+++.++++-+.
T Consensus 127 -~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 127 -EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred -cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 34444555556655 345799999999999999999999999999997653
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.68 E-value=1.1e-15 Score=117.89 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=78.4
Q ss_pred CceEEEEcCCCCChhc--hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-e--EEEE
Q 021282 27 AHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-K--VFLV 101 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~-~--~~lv 101 (314)
...+||+|||..+... ...++.+|.+.|+.+..+|.+|.|.|+..-....| ...|+|+..++.++.-. + -+++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEEEEE
Confidence 5789999999987654 34566778888999999999999999875433334 35669999999998533 3 3478
Q ss_pred EeCchHHHHHHHHHhcccceeeeEEec
Q 021282 102 AKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 102 GhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
|||-||-+++.+|+++++ ++-++-|.
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcs 136 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCS 136 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcc
Confidence 999999999999999988 66666554
No 73
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=1.1e-14 Score=116.52 Aligned_cols=95 Identities=16% Similarity=0.284 Sum_probs=71.9
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhh-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C-CceEEE
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----G-LAKVFL 100 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----~-~~~~~l 100 (314)
.++||++||...+...-..+...|.. .+++|+++|.+|+|.|...+.. ....+|+.++.+.| | .++++|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE-----~n~y~Di~avye~Lr~~~g~~~~Iil 134 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE-----RNLYADIKAVYEWLRNRYGSPERIIL 134 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc-----ccchhhHHHHHHHHHhhcCCCceEEE
Confidence 58999999997665543334334433 3799999999999999764322 14445566555554 3 678999
Q ss_pred EEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 101 VAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 101 vGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
.|+|+|+..++.+|++.| ++++||.+
T Consensus 135 ~G~SiGt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 135 YGQSIGTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred EEecCCchhhhhHhhcCC--cceEEEec
Confidence 999999999999999999 99999875
No 74
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=2e-16 Score=133.23 Aligned_cols=113 Identities=17% Similarity=0.232 Sum_probs=83.6
Q ss_pred EEEEEEeccCCCCCceEEEEcCCCCCh-hchHHHHH-HHhh-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021282 14 LNLHIAEAGADADAHVVVFLHGFPEIW-YSWRHQMV-GVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL 90 (314)
Q Consensus 14 ~~i~~~~~g~~~~~p~vlllHG~~~~~-~~~~~~~~-~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~ 90 (314)
..+.+.... +++|++|+||||+++. ..|...+. .++. .+|+||++|++|++.+..+. ..+++...++++.+++
T Consensus 25 ~~~~~~~f~--~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l 100 (275)
T cd00707 25 SSLKNSNFN--PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFL 100 (275)
T ss_pred hhhhhcCCC--CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHH
Confidence 344444333 3479999999999987 67865443 4543 47999999999985432211 1235556667777766
Q ss_pred HHh------CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 91 DHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 91 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.| +.++++||||||||.+|..++.++|++|.++++++++
T Consensus 101 ~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 101 DFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 665 4578999999999999999999999999999999864
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.65 E-value=7.5e-14 Score=113.05 Aligned_cols=271 Identities=20% Similarity=0.280 Sum_probs=156.9
Q ss_pred eeeeeeCCEEEEEEeccCCC-CCceEEEEcCCCCChhc-hHH-----HHHHHhhCCcEEEEeCCCCCCCCCCC-CCCC-C
Q 021282 6 HKFIKVQGLNLHIAEAGADA-DAHVVVFLHGFPEIWYS-WRH-----QMVGVATAGFRAIAPDCRGYGLSDPP-AEPE-K 76 (314)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~-~~p~vlllHG~~~~~~~-~~~-----~~~~l~~~~~~vi~~D~~G~G~S~~~-~~~~-~ 76 (314)
...|++.-..+++...|+.+ ++|.+|=.|..+.+... |.. .+..++. +|-|+-+|.|||-.-... +.+. .
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCCCC
Confidence 34455533478888888632 47889999999887665 443 3345666 499999999999765332 1222 2
Q ss_pred CCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCcc
Q 021282 77 TSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPG 156 (314)
Q Consensus 77 ~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (314)
-|++++|++|..++++++++.++-+|---|++|-.++|..||+||.+|||+++....++...+.. .+.....+...+
T Consensus 103 Psmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~---~K~~s~~l~~~G 179 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAY---NKVSSNLLYYYG 179 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHH---HHHHHHHHHhhc
Confidence 38999999999999999999999999999999999999999999999999987544333221110 000000000000
Q ss_pred chhhhcccccHHHHHHHHHhhhcCCCCCCCcc-hhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccc
Q 021282 157 RAEADFGRLDAKTVVRNIYILFSRSEIPIAPE-NKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR 235 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
....-.+-++.. .|.+.......+ -++....+.+. ..+..+..|...+.. .+.+.
T Consensus 180 -----mt~~~~d~ll~H---~Fg~e~~~~~~diVq~Yr~~l~~~------~N~~Nl~~fl~ayn~----------R~DL~ 235 (326)
T KOG2931|consen 180 -----MTQGVKDYLLAH---HFGKEELGNNSDIVQEYRQHLGER------LNPKNLALFLNAYNG----------RRDLS 235 (326)
T ss_pred -----hhhhHHHHHHHH---HhccccccccHHHHHHHHHHHHhc------CChhHHHHHHHHhcC----------CCCcc
Confidence 000000011111 111111000000 00111111110 111112222221110 01111
Q ss_pred cccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 236 ENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 236 ~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
........ .++||+|++.|++.+.+. .+.+.. .++. -.+..+..+.+||=.+..++|.++++.++=||+
T Consensus 236 ~~r~~~~~-tlkc~vllvvGd~Sp~~~--~vv~~n--~~Ld--p~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 236 IERPKLGT-TLKCPVLLVVGDNSPHVS--AVVECN--SKLD--PTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ccCCCcCc-cccccEEEEecCCCchhh--hhhhhh--cccC--cccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 00000111 578999999999997763 222221 1222 135899999999999999999999999999985
No 76
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.65 E-value=7.3e-15 Score=137.36 Aligned_cols=226 Identities=18% Similarity=0.254 Sum_probs=133.9
Q ss_pred CCEEEEEEeccCC---CCC--ceEEEEcCCCCChhc--hHHHHHHHhhCCcEEEEeCCCCCCC---C--CCC-CCCCCCC
Q 021282 12 QGLNLHIAEAGAD---ADA--HVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGL---S--DPP-AEPEKTS 78 (314)
Q Consensus 12 ~g~~i~~~~~g~~---~~~--p~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~---S--~~~-~~~~~~~ 78 (314)
||.+++.+..-+. +.+ |.||++||.|..... |....+.|+..||.|+.++.||-+- . +.. .+.....
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 8989997765532 122 789999999865444 5556667888999999999996554 2 111 1112234
Q ss_pred HHHHHHHHHHHHHHhC-C--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCc
Q 021282 79 FQDMVDDLLAILDHLG-L--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEP 155 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~-~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (314)
++++.+.+. +++..+ + +++.+.|||+||+.++..+.+.| ++++.+...+... .. ....
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~-----~~----------~~~~-- 514 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD-----WL----------LYFG-- 514 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch-----hh----------hhcc--
Confidence 555555555 444444 3 37999999999999999999999 5555543322110 00 0000
Q ss_pred cchhhhcccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccc
Q 021282 156 GRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR 235 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
..+ . . + .. ...+.. ..+.+ ..+.+... -
T Consensus 515 --------~~~----~-~-~---~~-------~~~~~~-------~~~~~-~~~~~~~~--------------------s 542 (620)
T COG1506 515 --------EST----E-G-L---RF-------DPEENG-------GGPPE-DREKYEDR--------------------S 542 (620)
T ss_pred --------ccc----h-h-h---cC-------CHHHhC-------CCccc-ChHHHHhc--------------------C
Confidence 000 0 0 0 00 000000 00000 00100000 0
Q ss_pred cccCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccc-cChHHHHHHHHHHHhhc
Q 021282 236 ENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFLNKH 313 (314)
Q Consensus 236 ~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 313 (314)
. .....+|++|+|+|||++|..++.+....++. .+++.-..++++++|+.||.+.. ++-..+.+.+.+|+.++
T Consensus 543 p---~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~--aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 543 P---IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD--ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred h---hhhhcccCCCEEEEeecCCccCChHHHHHHHH--HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 0 00011699999999999999998766655543 34445567899999999997777 55677888888888764
No 77
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=1e-14 Score=122.60 Aligned_cols=120 Identities=22% Similarity=0.294 Sum_probs=94.3
Q ss_pred eCCEEEEEEeccCCC--CCceEEEEcCCCCChh-----------chHHHHH---HHhhCCcEEEEeCCCCCC-CCCCCC-
Q 021282 11 VQGLNLHIAEAGADA--DAHVVVFLHGFPEIWY-----------SWRHQMV---GVATAGFRAIAPDCRGYG-LSDPPA- 72 (314)
Q Consensus 11 ~~g~~i~~~~~g~~~--~~p~vlllHG~~~~~~-----------~~~~~~~---~l~~~~~~vi~~D~~G~G-~S~~~~- 72 (314)
+++..+.|+++|+-. ....||++||+.++++ .|+.++. .+....|.||+.|..|.+ .|+.|.
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 467889999999632 2358999999988433 4555442 244457999999999998 444441
Q ss_pred ---C-------CCCCCHHHHHHHHHHHHHHhCCceEE-EEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 73 ---E-------PEKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 73 ---~-------~~~~~~~~~a~d~~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
. ...+|+.+++.--..++++||++++. +||-||||+.|+..+..||++|.+++.++++
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 1 12368889998888999999999977 8899999999999999999999999988764
No 78
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.64 E-value=3.1e-14 Score=116.87 Aligned_cols=266 Identities=17% Similarity=0.229 Sum_probs=137.9
Q ss_pred eeeeCCEEEEEEeccCCC-CCceEEEEcCCCCChhc-hHHHH-----HHHhhCCcEEEEeCCCCCCCCCCC-CCCC-CCC
Q 021282 8 FIKVQGLNLHIAEAGADA-DAHVVVFLHGFPEIWYS-WRHQM-----VGVATAGFRAIAPDCRGYGLSDPP-AEPE-KTS 78 (314)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~-~~p~vlllHG~~~~~~~-~~~~~-----~~l~~~~~~vi~~D~~G~G~S~~~-~~~~-~~~ 78 (314)
.+++.-..+++...|+.+ ++|++|=.|-.+.+... |..+. ..+. ++|.++-+|.||+..-... +... .-|
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccC
Confidence 466666689999889633 48999999998887766 55433 3454 4799999999999875432 1222 238
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccch
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRA 158 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (314)
++++|+++.+++++++++.++-+|---|+.|-.++|.++|++|.++||+++....++...+.. .......+..-
T Consensus 82 md~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~---~K~~~~~L~~~--- 155 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFY---QKLSSWLLYSY--- 155 (283)
T ss_dssp HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHH---HHHH----------
T ss_pred HHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHH---HHHhccccccc---
Confidence 999999999999999999999999999999999999999999999999987544333211110 00000000000
Q ss_pred hhhcccccHHHHHHHHHhhhcCCCCCCCcc-hhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccc
Q 021282 159 EADFGRLDAKTVVRNIYILFSRSEIPIAPE-NKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLREN 237 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
.+.....+.++...| .........+ .+.+...+.. ...+..+..|...+.. .+ +
T Consensus 156 --gmt~~~~d~Ll~h~F---g~~~~~~n~Dlv~~yr~~l~~------~~Np~Nl~~f~~sy~~----------R~----D 210 (283)
T PF03096_consen 156 --GMTSSVKDYLLWHYF---GKEEEENNSDLVQTYRQHLDE------RINPKNLALFLNSYNS----------RT----D 210 (283)
T ss_dssp --CTTS-HHHHHHHHHS----HHHHHCT-HHHHHHHHHHHT-------TTHHHHHHHHHHHHT-----------------
T ss_pred --ccccchHHhhhhccc---ccccccccHHHHHHHHHHHhc------CCCHHHHHHHHHHHhc----------cc----c
Confidence 000000011111100 0000000000 0000111110 0112222333222211 00 0
Q ss_pred cCCCccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 238 FSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 238 ~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
...... ...||+|++.|++.+... .+.+.. .++. -..+++..+++||=.+..|+|+.+++.++=||+-
T Consensus 211 L~~~~~-~~~c~vLlvvG~~Sp~~~--~vv~~n--s~Ld--p~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 211 LSIERP-SLGCPVLLVVGDNSPHVD--DVVEMN--SKLD--PTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp --SECT-TCCS-EEEEEETTSTTHH--HHHHHH--HHS---CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred chhhcC-CCCCCeEEEEecCCcchh--hHHHHH--hhcC--cccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 111111 467999999999987652 122211 1121 1358999999999999999999999999999863
No 79
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.63 E-value=2.5e-15 Score=139.95 Aligned_cols=112 Identities=20% Similarity=0.154 Sum_probs=90.6
Q ss_pred eeeeeeCCEEEEEEeccCCC--------CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCC------
Q 021282 6 HKFIKVQGLNLHIAEAGADA--------DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP------ 71 (314)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~--------~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~------ 71 (314)
.+++..++.+++|...|... ..|+|||+||+.++...|..++..|.+.||+||++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 34556688888887755421 1268999999999999999999999888999999999999999553
Q ss_pred ---C-CCCCC-----------CHHHHHHHHHHHHHHhC----------------CceEEEEEeCchHHHHHHHHHhc
Q 021282 72 ---A-EPEKT-----------SFQDMVDDLLAILDHLG----------------LAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 72 ---~-~~~~~-----------~~~~~a~d~~~~~~~l~----------------~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
. ....| ++...+.|+..+...++ ..+++++||||||.++..++...
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1 11112 78999999999999887 34899999999999999999864
No 80
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.60 E-value=5.4e-15 Score=99.29 Aligned_cols=78 Identities=32% Similarity=0.408 Sum_probs=67.7
Q ss_pred CEEEEEEeccCCCC-CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021282 13 GLNLHIAEAGADAD-AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 91 (314)
Q Consensus 13 g~~i~~~~~g~~~~-~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~ 91 (314)
|.+|+|..+.+++. +..|+++||+++++..|..++..|++.||.|+++|+||||+|+... ...-+++++++|+.++++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r-g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR-GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc-cccCCHHHHHHHHHHHhC
Confidence 67899998886544 6789999999999999999999999999999999999999998532 334589999999999874
No 81
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=2.5e-14 Score=113.81 Aligned_cols=223 Identities=18% Similarity=0.168 Sum_probs=135.8
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCceEEEEEeCc
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-HLGLAKVFLVAKDF 105 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~-~l~~~~~~lvGhS~ 105 (314)
.+-|+++|=.++++..|+.-...|-. ...++++.+||+|.--. ++...+++.+|+.+..-+. -+--+++.++||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~--ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFG--EPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccC--CcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 56799999888887777766556654 59999999999997633 2345799999999998887 45556899999999
Q ss_pred hHHHHHHHHHhccc---ceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHHHhhhcCCC
Q 021282 106 GALTAYMFAIQHQE---RVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSE 182 (314)
Q Consensus 106 Gg~va~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (314)
||++|.++|.+... ....+.++++... ..... ..+...+.+++++.+. .+....
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP--~~~~~--------------------~~i~~~~D~~~l~~l~-~lgG~p 140 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAP--HYDRG--------------------KQIHHLDDADFLADLV-DLGGTP 140 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCC--CCccc--------------------CCccCCCHHHHHHHHH-HhCCCC
Confidence 99999999987632 2555665554211 10000 0011112223333311 111110
Q ss_pred CCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccEEEEecCCCcccC
Q 021282 183 IPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLK 262 (314)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 262 (314)
+.--++.+++.+.- ......+... - .|+. . ... .++||+.++.|++|..++
T Consensus 141 -~e~led~El~~l~L--------------PilRAD~~~~-----e--~Y~~-----~-~~~-pl~~pi~~~~G~~D~~vs 191 (244)
T COG3208 141 -PELLEDPELMALFL--------------PILRADFRAL-----E--SYRY-----P-PPA-PLACPIHAFGGEKDHEVS 191 (244)
T ss_pred -hHHhcCHHHHHHHH--------------HHHHHHHHHh-----c--cccc-----C-CCC-CcCcceEEeccCcchhcc
Confidence 00011122222110 0111111100 0 0211 1 111 589999999999999886
Q ss_pred CCCchhhhccccccccCC-CceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 263 FPGIEDYIRSGKAKDLVP-NLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
.+.+. .+++... ..++.+|| +|||...++.+++.+.|...+.
T Consensus 192 ~~~~~------~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 192 RDELG------AWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHHHH------HHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 43322 2344444 68999997 6999999999999999999885
No 82
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.59 E-value=2.6e-15 Score=122.39 Aligned_cols=194 Identities=19% Similarity=0.228 Sum_probs=113.9
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHh------CCceEEEEEeCchHHHHHHHHHh
Q 021282 45 HQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 45 ~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~a~d~~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
.....|+++||.|+.+|.||.+..... .......-....+|+.+.++.+ .-+++.++|+|+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 345567788999999999998843211 0001111234566777766666 23679999999999999999999
Q ss_pred cccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcc
Q 021282 117 HQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLV 196 (314)
Q Consensus 117 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (314)
+|+++++++..++........... +. .....+.. ...
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~~-------------------------~~--~~~~~~~~-~~~--------------- 121 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGTT-------------------------DI--YTKAEYLE-YGD--------------- 121 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHHT-------------------------CC--HHHGHHHH-HSS---------------
T ss_pred cceeeeeeeccceecchhcccccc-------------------------cc--cccccccc-cCc---------------
Confidence 999999999876532211100000 00 00000000 000
Q ss_pred cCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCcccc--ccccEEEEecCCCcccCCCCchhhhcccc
Q 021282 197 SDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIA--VKVPALLIMGDKDYFLKFPGIEDYIRSGK 274 (314)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 274 (314)
.+...+.+..... . .. .. + +++|+|+++|++|..+|......+.. .
T Consensus 122 -------~~~~~~~~~~~s~-~-------------~~--------~~-~~~~~~P~li~hG~~D~~Vp~~~s~~~~~--~ 169 (213)
T PF00326_consen 122 -------PWDNPEFYRELSP-I-------------SP--------AD-NVQIKPPVLIIHGENDPRVPPSQSLRLYN--A 169 (213)
T ss_dssp -------TTTSHHHHHHHHH-G-------------GG--------GG-GCGGGSEEEEEEETTBSSSTTHHHHHHHH--H
T ss_pred -------cchhhhhhhhhcc-c-------------cc--------cc-cccCCCCEEEEccCCCCccCHHHHHHHHH--H
Confidence 0001111111100 0 00 00 3 78999999999999998766655543 3
Q ss_pred ccccCCCceEEEeCCCCCCcc-ccChHHHHHHHHHHHhhc
Q 021282 275 AKDLVPNLEIIHLPEGSHFVQ-EQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 275 ~~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 313 (314)
+.+.-..++++++|++||... .+...+..+.+.+|++++
T Consensus 170 L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 170 LRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 444444599999999999555 455668889999999764
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=3.8e-13 Score=120.64 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=85.4
Q ss_pred CCCceEEEEcCCCCChhchH-----HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CC
Q 021282 25 ADAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GL 95 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----~~ 95 (314)
..++|||+++.+-.-...|+ .+++.|.++||+|+.+|+++=+.++ ...+++++++.+.+.++.. |.
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 45789999999987766664 5788899999999999999977553 3468888888777777766 67
Q ss_pred ceEEEEEeCchHHHHHH----HHHhccc-ceeeeEEecCCCC
Q 021282 96 AKVFLVAKDFGALTAYM----FAIQHQE-RVSGVITLGVPIL 132 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~----~a~~~p~-~v~~lvl~~~~~~ 132 (314)
++++++|+||||.++.. +|+++++ +|++++++.++.-
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 89999999999999997 8899986 8999999876544
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.55 E-value=8.8e-14 Score=113.52 Aligned_cols=183 Identities=25% Similarity=0.329 Sum_probs=107.5
Q ss_pred CCCCceEEEEcCCCCChhchHHHHH-HHhhCCcEEEEeCCCC------CCCC--CCC------CCC--CCCCHHHHHHHH
Q 021282 24 DADAHVVVFLHGFPEIWYSWRHQMV-GVATAGFRAIAPDCRG------YGLS--DPP------AEP--EKTSFQDMVDDL 86 (314)
Q Consensus 24 ~~~~p~vlllHG~~~~~~~~~~~~~-~l~~~~~~vi~~D~~G------~G~S--~~~------~~~--~~~~~~~~a~d~ 86 (314)
++..+.|||+||++++...|..... .+...+.++|++.-|- .|.. .+- ... ..-.+...++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 3567899999999999977775544 2233467888876642 2331 121 000 011344455566
Q ss_pred HHHHHHh-----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhh
Q 021282 87 LAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEAD 161 (314)
Q Consensus 87 ~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
.++++.+ .-++++|.|.|.||++|+.++.++|+.+.+++.+++.....
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~--------------------------- 143 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE--------------------------- 143 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG---------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc---------------------------
Confidence 6666643 34579999999999999999999999999999886421100
Q ss_pred cccccHHHHHHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCC
Q 021282 162 FGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTP 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.. . . .. . .
T Consensus 144 -------------------~~--~-------~----~~---------------------------~-------------~ 151 (216)
T PF02230_consen 144 -------------------SE--L-------E----DR---------------------------P-------------E 151 (216)
T ss_dssp -------------------CC--C-------H----CC---------------------------H-------------C
T ss_pred -------------------cc--c-------c----cc---------------------------c-------------c
Confidence 00 0 0 00 0 0
Q ss_pred ccccccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhhc
Q 021282 242 EVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 313 (314)
Q Consensus 242 ~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 313 (314)
. .-+.|+++++|++|.++|....+... ..+++...+++++.+++.||.+. .+..+.+.+||+++
T Consensus 152 ~--~~~~pi~~~hG~~D~vvp~~~~~~~~--~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 152 A--LAKTPILIIHGDEDPVVPFEWAEKTA--EFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp C--CCTS-EEEEEETT-SSSTHHHHHHHH--HHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred c--cCCCcEEEEecCCCCcccHHHHHHHH--HHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 0 12579999999999999865444332 23455555789999999999775 34556688888775
No 85
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.53 E-value=1.3e-12 Score=108.28 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=75.3
Q ss_pred CCEEEEEEec-cCCCCCceEEEEcCCCCChhc-h-HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021282 12 QGLNLHIAEA-GADADAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (314)
Q Consensus 12 ~g~~i~~~~~-g~~~~~p~vlllHG~~~~~~~-~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~ 88 (314)
+|.-...+.. ..+..+|.||++||+-+++.+ | +.++..+.++||.||+++.||||.+-... +.-|+ ..+-+|+..
T Consensus 59 g~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~-p~~yh-~G~t~D~~~ 136 (345)
T COG0429 59 GGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS-PRLYH-SGETEDIRF 136 (345)
T ss_pred CCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC-cceec-ccchhHHHH
Confidence 4444444433 334567999999999877655 3 34566777889999999999999885532 22221 223366666
Q ss_pred HHHHh----CCceEEEEEeCchH-HHHHHHHHhccc-ceeeeEEec
Q 021282 89 ILDHL----GLAKVFLVAKDFGA-LTAYMFAIQHQE-RVSGVITLG 128 (314)
Q Consensus 89 ~~~~l----~~~~~~lvGhS~Gg-~va~~~a~~~p~-~v~~lvl~~ 128 (314)
+++.+ .-.|+..||.|+|| +++..++..-.+ .+.+.+.++
T Consensus 137 ~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs 182 (345)
T COG0429 137 FLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVS 182 (345)
T ss_pred HHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeee
Confidence 66655 45689999999999 777777765432 234444333
No 86
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.50 E-value=1.1e-11 Score=106.63 Aligned_cols=121 Identities=21% Similarity=0.317 Sum_probs=82.2
Q ss_pred eeeeee-CCEEEEEE-e-ccC------CCCCceEEEEcCCCCChhc-h-HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC
Q 021282 6 HKFIKV-QGLNLHIA-E-AGA------DADAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEP 74 (314)
Q Consensus 6 ~~~~~~-~g~~i~~~-~-~g~------~~~~p~vlllHG~~~~~~~-~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~ 74 (314)
...++. ||..+.+- . .+. +.+.|.||++||+.+++.. + +.++..+..+||+|+++..||+|.|.-. .+
T Consensus 95 Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~Lt-Tp 173 (409)
T KOG1838|consen 95 REIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLT-TP 173 (409)
T ss_pred eEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccC-CC
Confidence 345666 77776652 1 111 1245999999999876554 2 3444556678999999999999998754 23
Q ss_pred CCCCHHHHHHHHHHHHHHh----CCceEEEEEeCchHHHHHHHHHhccc---ceeeeEEec
Q 021282 75 EKTSFQDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLG 128 (314)
Q Consensus 75 ~~~~~~~~a~d~~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~ 128 (314)
..|+ ..+.+|+.++++++ -..|...||.||||.+-.-|...-.+ .+.++.++.
T Consensus 174 r~f~-ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~ 233 (409)
T KOG1838|consen 174 RLFT-AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCN 233 (409)
T ss_pred ceee-cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEec
Confidence 3343 34556666666665 45689999999999999998876543 445555544
No 87
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=1.2e-13 Score=128.05 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=89.6
Q ss_pred CCEEEEEEeccC--CCCCceEEEEcCCCCChh---chH-HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021282 12 QGLNLHIAEAGA--DADAHVVVFLHGFPEIWY---SWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (314)
Q Consensus 12 ~g~~i~~~~~g~--~~~~p~vlllHG~~~~~~---~~~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 85 (314)
||++|++...-+ .+..|+||++||++.+.. .|. .....|+++||.|+++|+||+|.|+.... .++ ...++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccchH
Confidence 788998654322 124689999999997653 222 23456778899999999999999986432 233 568888
Q ss_pred HHHHHHHhCC-----ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 86 LLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 86 ~~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.++++.+.. .++.++||||||.+++.+|+.+|+++++++..++.
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 8888888743 48999999999999999999999999999987643
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.49 E-value=4.3e-13 Score=109.19 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=71.2
Q ss_pred CCceEEEEcCCCCChhchH---HHHHHHhhCCcEEEEeCCCCCCCCCCCCC---C-----CCCCHHHHHHHHHHHHHHhC
Q 021282 26 DAHVVVFLHGFPEIWYSWR---HQMVGVATAGFRAIAPDCRGYGLSDPPAE---P-----EKTSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~---~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---~-----~~~~~~~~a~d~~~~~~~l~ 94 (314)
..|.||++||++++...|. .....+.+.||.|++||.||+|.+..... . ......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 3689999999998877665 22233334689999999999986532100 0 00111222222223333334
Q ss_pred C--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 95 L--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 95 ~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+ ++++|+|||+||.+++.++.++|+++++++.++++
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 4 47999999999999999999999999999877653
No 89
>PRK10162 acetyl esterase; Provisional
Probab=99.47 E-value=1.3e-11 Score=106.52 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCceEEEEcCCC---CChhchHHHHHHHhh-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ceEE
Q 021282 26 DAHVVVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL--AKVF 99 (314)
Q Consensus 26 ~~p~vlllHG~~---~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~--~~~~ 99 (314)
..|.||++||.+ ++...|+.+...|+. .|+.|+++|.|.......+. ...+..+..+.+.+..+.+++ ++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 368999999966 677778888888876 48999999999754332211 011222333444444556665 4799
Q ss_pred EEEeCchHHHHHHHHHhc------ccceeeeEEecC
Q 021282 100 LVAKDFGALTAYMFAIQH------QERVSGVITLGV 129 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~~------p~~v~~lvl~~~ 129 (314)
|+|+|+||.+|+.++.+. +.++.+++++.+
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 999999999999999764 356888887754
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.47 E-value=2.6e-13 Score=110.98 Aligned_cols=182 Identities=24% Similarity=0.316 Sum_probs=109.0
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCC---CC------CHHHHHHHHHHHHHHh---
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPE---KT------SFQDMVDDLLAILDHL--- 93 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~---~~------~~~~~a~d~~~~~~~l--- 93 (314)
..|.||++|++.+-...-+..+..|+++||.|++||+-+-.......... .+ ..+....|+.+.++.|
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 36899999998876666667788899999999999986544411110000 00 1234567776666665
Q ss_pred C---CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCCCCCCchhhhcCCcchhhhhccCccchhhhcccccHHHH
Q 021282 94 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTV 170 (314)
Q Consensus 94 ~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
. .+++.++|.||||.+|+.+|... +.+++.+..-+.... .
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~-----------~------------------------- 135 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP-----------P------------------------- 135 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-----------G-------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-----------C-------------------------
Confidence 2 35899999999999999999887 567777754220000 0
Q ss_pred HHHHHhhhcCCCCCCCcchhhhhhcccCCCCCCCCCCHHHHHHHHHhhhcCCCcccccccccccccccCCCccccccccE
Q 021282 171 VRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPA 250 (314)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 250 (314)
. . .. ...++++|+
T Consensus 136 ---------~----------~-------------------~~-----------------------------~~~~~~~P~ 148 (218)
T PF01738_consen 136 ---------P----------P-------------------LE-----------------------------DAPKIKAPV 148 (218)
T ss_dssp ---------G----------H-------------------HH-----------------------------HGGG--S-E
T ss_pred ---------c----------c-------------------hh-----------------------------hhcccCCCE
Confidence 0 0 00 000578999
Q ss_pred EEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccC-h-------HHHHHHHHHHHhhc
Q 021282 251 LLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQS-P-------EEVNQLILTFLNKH 313 (314)
Q Consensus 251 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p-------~~~~~~i~~fl~~~ 313 (314)
++++|++|..++.+....+.. .+++.-...+++++|+++|...... + ++-.+.+.+||+++
T Consensus 149 l~~~g~~D~~~~~~~~~~~~~--~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 149 LILFGENDPFFPPEEVEALEE--ALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EEEEETT-TTS-HHHHHHHHH--HHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred eecCccCCCCCChHHHHHHHH--HHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 999999999987654444432 2333446799999999999666543 2 34556677787764
No 91
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.39 E-value=3.8e-11 Score=102.89 Aligned_cols=119 Identities=22% Similarity=0.172 Sum_probs=74.8
Q ss_pred eeeeCCEEEEEEe--cc-CCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCC-CCCCC------------
Q 021282 8 FIKVQGLNLHIAE--AG-ADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG-LSDPP------------ 71 (314)
Q Consensus 8 ~~~~~g~~i~~~~--~g-~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G-~S~~~------------ 71 (314)
|-..+|.+++-+- .- ....-|.||.+||.++....|...+ .++..||-|+++|.||+| .|...
T Consensus 61 f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 3334777777332 11 1223488999999999988887654 466789999999999999 33111
Q ss_pred ----CC-CCCCCHHHHHHHHHHHHHHhC------CceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 72 ----AE-PEKTSFQDMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 72 ----~~-~~~~~~~~~a~d~~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
.. .+.+-+..+..|+.+.++.|. -+++.+.|.|.||.+++.+|+..| +|++++..-
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 00 122334456677777777652 357999999999999999999986 698888654
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.39 E-value=6.7e-11 Score=103.33 Aligned_cols=102 Identities=14% Similarity=0.174 Sum_probs=83.8
Q ss_pred ceEEEEcCCCCChhch-HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCch
Q 021282 28 HVVVFLHGFPEIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~~~~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~G 106 (314)
||||++--+.++.... +..++.|++ |+.|+..|+.--+.... ....++++++++-+.++++++|-+ ++++|.|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~--~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL--SAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch--hcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 7999999988775554 457788888 99999999998875422 123579999999999999999976 999999999
Q ss_pred HHHHHHHHHhc-----ccceeeeEEecCCCCC
Q 021282 107 ALTAYMFAIQH-----QERVSGVITLGVPILP 133 (314)
Q Consensus 107 g~va~~~a~~~-----p~~v~~lvl~~~~~~~ 133 (314)
|..++.+++.. |.++++++++++|.-.
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99988777665 6789999999876553
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=99.38 E-value=7.5e-12 Score=99.69 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=72.3
Q ss_pred ccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCC--------CCCCC-------CHHHHHHH
Q 021282 21 AGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPA--------EPEKT-------SFQDMVDD 85 (314)
Q Consensus 21 ~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~--------~~~~~-------~~~~~a~d 85 (314)
.+.++..|.|||+||++++...+-+....+. .+++++.+ | |.+.... ....+ ....+++.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~--r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~ 86 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSP--R--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEF 86 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcC--C--CCccccCcccceeecCCCccchhhHHHHHHHHHHH
Confidence 3334667889999999999888877444443 35676655 2 2221110 11122 34455666
Q ss_pred HHHHHHHhCC--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 86 LLAILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 86 ~~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+.+..++.++ ++++++|+|-||.+++.+..++|+.++++++..+
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g 132 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG 132 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC
Confidence 6666667777 7899999999999999999999999999997653
No 94
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.36 E-value=1.1e-10 Score=96.03 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=77.0
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCC-CCCCCCCC-CC---C-----CCCHHHHHHHHHHHHHHhC---
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRG-YGLSDPPA-EP---E-----KTSFQDMVDDLLAILDHLG--- 94 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G-~G~S~~~~-~~---~-----~~~~~~~a~d~~~~~~~l~--- 94 (314)
|.||++|++.+-....+.+..+|+.+||.|++||+-+ .|.+.... .+ . ..+......|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 8999999998887788889999999999999999987 34332211 01 0 1233677888888888873
Q ss_pred ---CceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 95 ---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 95 ---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
.+++.++|.||||.+++.++.+.| .+++.+..
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 457999999999999999999988 67776643
No 95
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.33 E-value=1.4e-11 Score=101.61 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=81.9
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEeCch
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~-~~~lvGhS~G 106 (314)
++|+|+|+.+++...|.+++..|....+.|+.++.||.+.... ...+++++|++..+-+....-+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4899999999999999999887754239999999999994332 2358999999999988877655 9999999999
Q ss_pred HHHHHHHHHhc---ccceeeeEEecCC
Q 021282 107 ALTAYMFAIQH---QERVSGVITLGVP 130 (314)
Q Consensus 107 g~va~~~a~~~---p~~v~~lvl~~~~ 130 (314)
|.+|.++|.+- -..+..++++|++
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999764 2458999999964
No 96
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.32 E-value=1.9e-11 Score=99.64 Aligned_cols=102 Identities=22% Similarity=0.229 Sum_probs=72.7
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhh--------CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVAT--------AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD----DLLAILDHL 93 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~----d~~~~~~~l 93 (314)
+|.|||||||..++...|+.+...+.. ..+++++.|+......-. ..++.+.++ .+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 478999999999998888777655521 258899999887643211 123333333 334444444
Q ss_pred -----CCceEEEEEeCchHHHHHHHHHhcc---cceeeeEEecCCCC
Q 021282 94 -----GLAKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVPIL 132 (314)
Q Consensus 94 -----~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvl~~~~~~ 132 (314)
+.++++||||||||.+|..++...+ +.|+.+|.+++|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 5678999999999999999887654 57999999987644
No 97
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.31 E-value=1.8e-10 Score=88.10 Aligned_cols=91 Identities=22% Similarity=0.278 Sum_probs=63.1
Q ss_pred CCCceEEEEcCC------CCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---
Q 021282 25 ADAHVVVFLHGF------PEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL--- 95 (314)
Q Consensus 25 ~~~p~vlllHG~------~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~--- 95 (314)
+..|..|.+|-- ..|.... .++..|.+.||.++.+|.||-|+|...-+ +.+ .-.+|..+.++.++-
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~-~la~~l~~~G~atlRfNfRgVG~S~G~fD---~Gi-GE~~Da~aaldW~~~~hp 100 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQ-TLARALVKRGFATLRFNFRGVGRSQGEFD---NGI-GELEDAAAALDWLQARHP 100 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHH-HHHHHHHhCCceEEeecccccccccCccc---CCc-chHHHHHHHHHHHHhhCC
Confidence 456888999943 3333333 35556778899999999999999986532 222 233455555565532
Q ss_pred -c-eEEEEEeCchHHHHHHHHHhcccc
Q 021282 96 -A-KVFLVAKDFGALTAYMFAIQHQER 120 (314)
Q Consensus 96 -~-~~~lvGhS~Gg~va~~~a~~~p~~ 120 (314)
. -+-|.|.|+|++|++.+|.+.|+-
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~la~r~~e~ 127 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQLAMRRPEI 127 (210)
T ss_pred CchhhhhcccchHHHHHHHHHHhcccc
Confidence 1 246789999999999999998873
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.27 E-value=8.3e-10 Score=86.95 Aligned_cols=85 Identities=19% Similarity=0.307 Sum_probs=63.6
Q ss_pred EEEEcCCCCChhchHHHH--HHHhhC--CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCc
Q 021282 30 VVFLHGFPEIWYSWRHQM--VGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (314)
Q Consensus 30 vlllHG~~~~~~~~~~~~--~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~ 105 (314)
||+||||..+..+.+... ..+.+. ..+++++|++ .+.....+.+.++++....+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 799999999988876532 233332 2456666655 24567778888999998877899999999
Q ss_pred hHHHHHHHHHhcccceeeeEEecCC
Q 021282 106 GALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 106 Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
||..|..+|.+++ +++ |+++++
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPa 90 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPA 90 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCC
Confidence 9999999999985 444 677754
No 99
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.25 E-value=1.7e-10 Score=89.89 Aligned_cols=88 Identities=25% Similarity=0.393 Sum_probs=62.3
Q ss_pred EEEEcCCCCC-hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHH
Q 021282 30 VVFLHGFPEI-WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (314)
Q Consensus 30 vlllHG~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~ 108 (314)
|++|||++++ ...|.+-++.-....++|-.+|+ +. -+.+++.+.+.+-+..+. ++++|||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~~------P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------DN------PDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------TS--------HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------CC------CCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 6899999876 45577665554444478887777 21 267888888888777664 4699999999999
Q ss_pred HHHHHH-HhcccceeeeEEecCC
Q 021282 109 TAYMFA-IQHQERVSGVITLGVP 130 (314)
Q Consensus 109 va~~~a-~~~p~~v~~lvl~~~~ 130 (314)
.++.++ ...+.+|.+++|++++
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--
T ss_pred HHHHHHhhcccccccEEEEEcCC
Confidence 999999 7778999999999754
No 100
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.24 E-value=9e-10 Score=87.40 Aligned_cols=117 Identities=22% Similarity=0.311 Sum_probs=76.6
Q ss_pred eeeee-CCEEEEEEeccCC----CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCC-CCCCCCCCCCCCCHH
Q 021282 7 KFIKV-QGLNLHIAEAGAD----ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSFQ 80 (314)
Q Consensus 7 ~~~~~-~g~~i~~~~~g~~----~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~ 80 (314)
+.+.+ +|.+|++++.-+. ..+++||+..||+.....|..++.+|+..||+||.||...| |.|+... ..+|+.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchH
Confidence 35666 8999999876532 13589999999999999999999999999999999998877 7887653 468999
Q ss_pred HHHHHHHHHHHHh---CCceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 81 DMVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 81 ~~a~d~~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
...+++..+++.| |..++-|+..|..|.||+..|++- .+.-+|+.
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLita 130 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITA 130 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEE
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEE
Confidence 9999999988887 778899999999999999999954 46666654
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.24 E-value=5.1e-11 Score=121.74 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=86.0
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEeCc
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDF 105 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~-~~~~lvGhS~ 105 (314)
+|+++|+||++++...|..++..|. .+++|+++|+||+|.+.. ..++++++++++.+.++.+.. .+++++||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 6899999999999999999888775 479999999999996632 357999999999999998764 4899999999
Q ss_pred hHHHHHHHHHh---cccceeeeEEecC
Q 021282 106 GALTAYMFAIQ---HQERVSGVITLGV 129 (314)
Q Consensus 106 Gg~va~~~a~~---~p~~v~~lvl~~~ 129 (314)
||.+|.++|.+ .|+++..++++++
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999986 5788999999885
No 102
>PRK10115 protease 2; Provisional
Probab=99.22 E-value=1.4e-09 Score=102.84 Aligned_cols=119 Identities=17% Similarity=0.152 Sum_probs=84.1
Q ss_pred eCCEEEEEE-ec--c--CCCCCceEEEEcCCCCChh--chHHHHHHHhhCCcEEEEeCCCCCCCCCCC------CCCCCC
Q 021282 11 VQGLNLHIA-EA--G--ADADAHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP------AEPEKT 77 (314)
Q Consensus 11 ~~g~~i~~~-~~--g--~~~~~p~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~------~~~~~~ 77 (314)
-||.+|.+. .. + .+...|.||++||.++... .|......|+++||-|+.++.||-|.=... ......
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 399998863 22 1 1123599999999887653 366666788899999999999997643221 011123
Q ss_pred CHHHHHHHHHHHHHHh--CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 78 SFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 78 ~~~~~a~d~~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+++++++.+..+++.= .-+++.+.|.|.||.++..++..+|++++++|...+
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp 557 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVP 557 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCC
Confidence 5566655555555431 235799999999999999999999999999996543
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.21 E-value=8.7e-10 Score=81.61 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=77.6
Q ss_pred eEEEEcCCCCCh--hchHHHHHHHhhCCcEEEEeCCCC-----CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021282 29 VVVFLHGFPEIW--YSWRHQMVGVATAGFRAIAPDCRG-----YGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 29 ~vlllHG~~~~~--~~~~~~~~~l~~~~~~vi~~D~~G-----~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
+|||-||.+++. .....+...|+..|+.|..+++|= .|... |+.+...--..+...+.++.+.+.-.+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rk-Pp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRK-PPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCC-CcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 799999887654 445666777888899999999763 33222 2223333456788889999998887899999
Q ss_pred EeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 102 AKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 102 GhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
|+||||.++..+|..-.-.|.++++++-|.-
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfh 125 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFH 125 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccC
Confidence 9999999999999765555999999886543
No 104
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.16 E-value=1.8e-10 Score=102.30 Aligned_cols=94 Identities=16% Similarity=0.292 Sum_probs=71.5
Q ss_pred CChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 38 EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
.....|..+++.|.+.||.+ ..|++|+|.+.+........+..+.+.+.++.+..+.++++||||||||.+++.++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 56678999999999888655 89999999986542111123455555555666666888999999999999999999998
Q ss_pred ccc----eeeeEEecCCCC
Q 021282 118 QER----VSGVITLGVPIL 132 (314)
Q Consensus 118 p~~----v~~lvl~~~~~~ 132 (314)
|+. |+++|.+++|..
T Consensus 184 p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CHhHHhHhccEEEECCCCC
Confidence 864 688889876543
No 105
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.14 E-value=9.3e-10 Score=92.29 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=88.0
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhh---CCcEEEEeCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCC----
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVAT---AGFRAIAPDCRGYGLSDPP----AEPEKTSFQDMVDDLLAILDHLGL---- 95 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~---~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~a~d~~~~~~~l~~---- 95 (314)
.+.++|++|.||-..-|...+..|-+ ..+.|++..+.||-.++.. .....|+++++++-..++++++-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 46799999999999999888777663 4799999999999988664 134678999999999999887643
Q ss_pred --ceEEEEEeCchHHHHHHHHHhcc---cceeeeEEecCC
Q 021282 96 --AKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVP 130 (314)
Q Consensus 96 --~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvl~~~~ 130 (314)
.+++|+|||.|+++++++..+.| .+|.+++++-+.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 46999999999999999999999 789999888654
No 106
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.13 E-value=2.7e-09 Score=93.19 Aligned_cols=131 Identities=23% Similarity=0.319 Sum_probs=94.8
Q ss_pred ccceeeeee-CCEEEEEEeccCC-CCCceEEEEcCCCCChhchHHH------HHHHhhCCcEEEEeCCCCCCCCCCCCC-
Q 021282 3 QIEHKFIKV-QGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQ------MVGVATAGFRAIAPDCRGYGLSDPPAE- 73 (314)
Q Consensus 3 ~~~~~~~~~-~g~~i~~~~~g~~-~~~p~vlllHG~~~~~~~~~~~------~~~l~~~~~~vi~~D~~G~G~S~~~~~- 73 (314)
+.|...+++ ||+-+........ ..+|||+|.||+.+++..|-.. +-.|++.||+|..-..||--.|.....
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l 126 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL 126 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc
Confidence 345566666 9997766543322 4579999999999999999654 234678899999999999877755311
Q ss_pred -------CCCCCHHHHH-HHHHHHHHH----hCCceEEEEEeCchHHHHHHHHHhccc---ceeeeEEecCCCCC
Q 021282 74 -------PEKTSFQDMV-DDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVPILP 133 (314)
Q Consensus 74 -------~~~~~~~~~a-~d~~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~~~~ 133 (314)
.-.+|+++++ .|+-+.++. -+.++.+.||||-|+.+...+.+.+|+ +|+.+++++++..+
T Consensus 127 ~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 127 SPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 1134555543 244444443 377899999999999999999999876 78889988876543
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=5.1e-10 Score=91.45 Aligned_cols=102 Identities=29% Similarity=0.392 Sum_probs=74.6
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHh------CCceEE
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA-ILDHL------GLAKVF 99 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~-~~~~l------~~~~~~ 99 (314)
=|.|||+||+......|..++.+++..||-||++|+...+..+.. .+..+..+.++.+.+ +-..| +.+++.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~--~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT--DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc--hhHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 489999999997777788899999999999999997665432111 111233334443333 12222 456899
Q ss_pred EEEeCchHHHHHHHHHhc-----ccceeeeEEecCC
Q 021282 100 LVAKDFGALTAYMFAIQH-----QERVSGVITLGVP 130 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~ 130 (314)
|.|||.||-+|..++..+ +.++++++++++.
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 999999999999999988 6689999999864
No 108
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.05 E-value=1.7e-09 Score=92.71 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=83.2
Q ss_pred CCceEEEEcCCCCChhchH-----HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 021282 26 DAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 100 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~l 100 (314)
.++|||.+|-+-.....|+ ..+..|.+.|+.|..+|+++=..+......+.|-.+.+.+.+..+.+..|.+++.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 4689999999987766665 34566778899999999998777754332233444555566777777889999999
Q ss_pred EEeCchHHHHHHHHHhcccc-eeeeEEecCCC
Q 021282 101 VAKDFGALTAYMFAIQHQER-VSGVITLGVPI 131 (314)
Q Consensus 101 vGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~ 131 (314)
+|++.||.++..+++.+|.+ +++++++.++.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecch
Confidence 99999999999999999887 99999887543
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.05 E-value=5.3e-09 Score=87.18 Aligned_cols=99 Identities=13% Similarity=0.239 Sum_probs=61.3
Q ss_pred CceEEEEcCCCCChhc---hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------CC
Q 021282 27 AHVVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL--------GL 95 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~---~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l--------~~ 95 (314)
...||||-|++..... ...++..|...++.|+-+-++- +... ....+++.=++||.++++.| +-
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G-~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSG-WGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTT-S-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCC-cCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 3489999999864333 3445566655689999998763 1111 11347777788888877765 24
Q ss_pred ceEEEEEeCchHHHHHHHHHhcc-----cceeeeEEecCC
Q 021282 96 AKVFLVAKDFGALTAYMFAIQHQ-----ERVSGVITLGVP 130 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lvl~~~~ 130 (314)
++++|+|||.|+--++.|+.+.. ..|.++||-++.
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 68999999999999999998752 679999998764
No 110
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.05 E-value=3.1e-09 Score=92.25 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=73.1
Q ss_pred eeeCCEEEE-EEeccCCCCCceEEEEc-CCCCChhchHHHH-HHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021282 9 IKVQGLNLH-IAEAGADADAHVVVFLH-GFPEIWYSWRHQM-VGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (314)
Q Consensus 9 ~~~~g~~i~-~~~~g~~~~~p~vlllH-G~~~~~~~~~~~~-~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 85 (314)
+...|.+|. |.+..+..+..|+|++- |.-+-...+...+ ..|..+|+.++++|+||.|.|...+-...+ +.+.+.
T Consensus 170 iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~--~~l~~a 247 (411)
T PF06500_consen 170 IPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS--SRLHQA 247 (411)
T ss_dssp EEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C--CHHHHH
T ss_pred EeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH--HHHHHH
Confidence 344555555 33333222233455455 5544444543343 457788999999999999998543211222 345566
Q ss_pred HHHHHHHhC---CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 86 LLAILDHLG---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 86 ~~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.+.+.... .+++.++|.|+||.+|.++|..+++|++++|..|++
T Consensus 248 VLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 248 VLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp HHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred HHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 666666553 458999999999999999999999999999998864
No 111
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.02 E-value=3.7e-09 Score=86.97 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=84.5
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEeCch
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~-~~~~~lvGhS~G 106 (314)
|||+++|+..+....|.++...+... .+|+..+-||+|.-..+ .-+++++++...+-|..+. ..+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 68999999999999999888888764 99999999999964322 3489999999998888774 458999999999
Q ss_pred HHHHHHHHHhc---ccceeeeEEecCCCC
Q 021282 107 ALTAYMFAIQH---QERVSGVITLGVPIL 132 (314)
Q Consensus 107 g~va~~~a~~~---p~~v~~lvl~~~~~~ 132 (314)
|.||+.+|.+- -+.|..++++|++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999763 357999999997644
No 112
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.02 E-value=1.1e-09 Score=88.25 Aligned_cols=89 Identities=20% Similarity=0.201 Sum_probs=54.5
Q ss_pred ceEEEEcCCCC-ChhchHHHHHHHhhCCcE---EEEeCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCceEEEE
Q 021282 28 HVVVFLHGFPE-IWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPE--KTSFQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 28 p~vlllHG~~~-~~~~~~~~~~~l~~~~~~---vi~~D~~G~G~S~~~~~~~--~~~~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
.||||+||..+ ....|..+++.|.++||. |+++++-....+....... --+..++++.|.++++.-|- ||.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999998 678899999999999999 8999985444322111000 00123455555555555688 99999
Q ss_pred EeCchHHHHHHHHHhc
Q 021282 102 AKDFGALTAYMFAIQH 117 (314)
Q Consensus 102 GhS~Gg~va~~~a~~~ 117 (314)
||||||.++..+..-.
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999999887643
No 113
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.98 E-value=2.6e-09 Score=93.88 Aligned_cols=103 Identities=26% Similarity=0.296 Sum_probs=59.7
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCC-CC-C----CCC---CC-------C------CCC---C-H-
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GL-S----DPP---AE-------P------EKT---S-F- 79 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~-G~-S----~~~---~~-------~------~~~---~-~- 79 (314)
=|.|||.||++++...+..+...|+.+||-|+++|+|.. +- + +.. .. . ... . +
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 489999999999999999999999999999999999953 21 0 000 00 0 000 0 0
Q ss_pred ---H---HHHHHHHHHHHHh--------------------------CCceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 80 ---Q---DMVDDLLAILDHL--------------------------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 80 ---~---~~a~d~~~~~~~l--------------------------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
. .=+.|+..+++.| +.+++.++|||+||..++..+.+. .+++..|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 0 1123333333322 245799999999999999888776 678888888
Q ss_pred cCC
Q 021282 128 GVP 130 (314)
Q Consensus 128 ~~~ 130 (314)
|+.
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 854
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.97 E-value=3.3e-08 Score=94.38 Aligned_cols=81 Identities=17% Similarity=0.130 Sum_probs=65.9
Q ss_pred HHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CceEEEEEeCc
Q 021282 46 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG--------------------LAKVFLVAKDF 105 (314)
Q Consensus 46 ~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~--------------------~~~~~lvGhS~ 105 (314)
....++.+||.|+..|.||.|.|+.... .++ ..-.+|..++|+-+. -.+|.++|.||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 3456888899999999999999986432 222 456778888888775 35899999999
Q ss_pred hHHHHHHHHHhcccceeeeEEecC
Q 021282 106 GALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 106 Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
||.+++.+|+..|..++++|..++
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCC
Confidence 999999999999999999997653
No 115
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.97 E-value=1.9e-08 Score=81.16 Aligned_cols=118 Identities=19% Similarity=0.232 Sum_probs=82.5
Q ss_pred eeeeCCEEEEEEeccC--C-CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCC--C--C-C------
Q 021282 8 FIKVQGLNLHIAEAGA--D-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDP--P--A-E------ 73 (314)
Q Consensus 8 ~~~~~g~~i~~~~~g~--~-~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~--~--~-~------ 73 (314)
|...+|.+|.-+..-+ . ..-|.||-.||.+++...|...+ .+...||.|++.|-||.|.|+. + + .
T Consensus 61 f~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~ 139 (321)
T COG3458 61 FTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGF 139 (321)
T ss_pred EeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCce
Confidence 3345888888553221 1 23589999999999988886554 4666799999999999998833 1 1 1
Q ss_pred --------CCCCCHHHHHHHHHHHHHHh------CCceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 74 --------PEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 74 --------~~~~~~~~~a~d~~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
.+.|=+.....|+...++.+ .-+++.+.|.|.||.+|+.+|+..| ++++++..
T Consensus 140 mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 140 MTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred eEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 11222233445555555554 3468999999999999999999887 78888743
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.90 E-value=6e-09 Score=86.02 Aligned_cols=106 Identities=17% Similarity=0.327 Sum_probs=70.7
Q ss_pred CceEEEEcCCCCChhchHHHHHHHh-hCC--cEEEEeCCCCCCC----------CCCC------CCCCCCCHHHHHHHHH
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVA-TAG--FRAIAPDCRGYGL----------SDPP------AEPEKTSFQDMVDDLL 87 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~-~~~--~~vi~~D~~G~G~----------S~~~------~~~~~~~~~~~a~d~~ 87 (314)
..|.||+||++++...+...+..+. ..+ -.++..+----|. ...| ......++...+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 5799999999999999999999886 333 2344333322221 1112 1111136888888888
Q ss_pred HHHHHh----CCceEEEEEeCchHHHHHHHHHhccc-----ceeeeEEecCCCC
Q 021282 88 AILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 132 (314)
Q Consensus 88 ~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~ 132 (314)
.++..| +++++.+|||||||.++..|+..+-. .+.++|.|++|+.
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 888877 78899999999999999999988632 5899999997654
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.90 E-value=1.8e-07 Score=79.40 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=74.1
Q ss_pred CCCceEEEEcCCCCChhchHH-H-HHHHhhCCcEEEEeCCCCCCCCCCCCCCC--CCCHHHH-------HHHHHHHHH--
Q 021282 25 ADAHVVVFLHGFPEIWYSWRH-Q-MVGVATAGFRAIAPDCRGYGLSDPPAEPE--KTSFQDM-------VDDLLAILD-- 91 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~-~-~~~l~~~~~~vi~~D~~G~G~S~~~~~~~--~~~~~~~-------a~d~~~~~~-- 91 (314)
+.+|.+|.|.|-+++....+. + +..|+++|..-+.+..|=||.-.+..... -.++.++ +.+...+++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 357889999999987654432 3 56788889999999999999876543221 1123222 233333333
Q ss_pred -HhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 92 -HLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 92 -~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
..|..++.+.|.||||.+|...|+.+|..+.-+-+++.
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 33778999999999999999999999998776665543
No 118
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.89 E-value=2.5e-08 Score=90.07 Aligned_cols=125 Identities=15% Similarity=0.181 Sum_probs=87.6
Q ss_pred eeeeeeC----CEEEEEEecc---CCCCCceEEEEcCCCCChhchHHHHH-----------HH------hhCCcEEEEeC
Q 021282 6 HKFIKVQ----GLNLHIAEAG---ADADAHVVVFLHGFPEIWYSWRHQMV-----------GV------ATAGFRAIAPD 61 (314)
Q Consensus 6 ~~~~~~~----g~~i~~~~~g---~~~~~p~vlllHG~~~~~~~~~~~~~-----------~l------~~~~~~vi~~D 61 (314)
..|++++ +..++|+-.. +..+.|.||+++|.|+++..+....+ .+ ..+..+++.+|
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iD 128 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVD 128 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEe
Confidence 4678874 4677776433 33457999999999998876532211 00 12347999999
Q ss_pred CC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceEEEEEeCchHHHHHHHHHhc----------ccceee
Q 021282 62 CR-GYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKVFLVAKDFGALTAYMFAIQH----------QERVSG 123 (314)
Q Consensus 62 ~~-G~G~S~~~~~~~~~~~~~~a~d~~~~~~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----------p~~v~~ 123 (314)
+| |+|.|.........+.++.++|+.++++. ++..+++|+||||||..+..+|.+- +=.+++
T Consensus 129 qP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkG 208 (462)
T PTZ00472 129 QPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAG 208 (462)
T ss_pred CCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEE
Confidence 75 99988653322345678899999999984 4557899999999999998888763 124788
Q ss_pred eEEecCC
Q 021282 124 VITLGVP 130 (314)
Q Consensus 124 lvl~~~~ 130 (314)
+++.++.
T Consensus 209 i~IGNg~ 215 (462)
T PTZ00472 209 LAVGNGL 215 (462)
T ss_pred EEEeccc
Confidence 8876653
No 119
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.88 E-value=1.5e-08 Score=79.91 Aligned_cols=115 Identities=23% Similarity=0.314 Sum_probs=78.0
Q ss_pred CCEEEEEEeccCCCCCceEEEEc-CCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC-CCCCCHHHHHH-HHHH
Q 021282 12 QGLNLHIAEAGADADAHVVVFLH-GFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-PEKTSFQDMVD-DLLA 88 (314)
Q Consensus 12 ~g~~i~~~~~g~~~~~p~vlllH-G~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~a~-d~~~ 88 (314)
||+.+-......+.+.+-.+++- +++.-...++..+..++..||.|..+|+||-|.|+.... ...+++.++|. |+.+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 88888766655433344344555 444555566778888888899999999999999987632 23466777653 5555
Q ss_pred HHHHh----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 89 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 89 ~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
.++.+ .--+...|||||||.+.-.+.. +| ++.+....+
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG 135 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFG 135 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEec
Confidence 55554 3447889999999987766555 44 555555554
No 120
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.88 E-value=1.6e-08 Score=85.89 Aligned_cols=94 Identities=24% Similarity=0.253 Sum_probs=67.1
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCC--CCCCCCCCCC-CCC---CHHHHHHHHHHHHHH-------
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRG--YGLSDPPAEP-EKT---SFQDMVDDLLAILDH------- 92 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G--~G~S~~~~~~-~~~---~~~~~a~d~~~~~~~------- 92 (314)
.-|.|+|-||.+.+...|..+++.+++.||-|.++|+|| .|.......+ ..| -+.+-..|+..+++.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 358999999999999999999999999999999999999 3443322111 001 122333333333333
Q ss_pred ------hCCceEEEEEeCchHHHHHHHHHhccc
Q 021282 93 ------LGLAKVFLVAKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 93 ------l~~~~~~lvGhS~Gg~va~~~a~~~p~ 119 (314)
+...++.++|||+||+.+++.+.-..+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccccc
Confidence 345689999999999999999876554
No 121
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.87 E-value=1.8e-09 Score=92.91 Aligned_cols=104 Identities=14% Similarity=0.203 Sum_probs=64.5
Q ss_pred CCCceEEEEcCCCCCh--hchHHH-HHHHhh---CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----
Q 021282 25 ADAHVVVFLHGFPEIW--YSWRHQ-MVGVAT---AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----- 93 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~--~~~~~~-~~~l~~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----- 93 (314)
++.|+++++|||.++. ..|-.. ...+.. .+++||++|+...-.. ............++.+..+++.|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 3579999999999877 467543 343444 4799999999743221 00000012233444444444443
Q ss_pred -CCceEEEEEeCchHHHHHHHHHhccc--ceeeeEEecCC
Q 021282 94 -GLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (314)
Q Consensus 94 -~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~ 130 (314)
..+++||||||+||.||-..+..... ++.+|+.+|++
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 45789999999999999999988877 89999999964
No 122
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.86 E-value=1.7e-08 Score=85.42 Aligned_cols=115 Identities=15% Similarity=0.188 Sum_probs=78.7
Q ss_pred CCEEEEEEecc----CCCCCceEEEEcCCCCCh-hchHHH-H--------HHHhhCCcEEEEeCCCCCCCCCCCCCCCCC
Q 021282 12 QGLNLHIAEAG----ADADAHVVVFLHGFPEIW-YSWRHQ-M--------VGVATAGFRAIAPDCRGYGLSDPPAEPEKT 77 (314)
Q Consensus 12 ~g~~i~~~~~g----~~~~~p~vlllHG~~~~~-~~~~~~-~--------~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 77 (314)
||++|+.-..- .+..-|+||..|+.+.+. ...... . ..++++||-||..|.||.|.|+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 67888864332 222347899999988653 222211 0 127888999999999999999865332
Q ss_pred CHHHHHHHHHHHHHHhC---C--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 78 SFQDMVDDLLAILDHLG---L--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 78 ~~~~~a~d~~~~~~~l~---~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
....-++|..++|+-+. + .+|-++|.|++|..++..|+..|..+++++...+
T Consensus 78 ~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 78 MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 15567788888888773 2 3799999999999999999988999999997754
No 123
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.83 E-value=2.6e-08 Score=78.29 Aligned_cols=115 Identities=18% Similarity=0.233 Sum_probs=69.9
Q ss_pred eeeCCEEEEEEeccCCCCCceEEEEcCCCC-ChhchHHHHHHHhhCCcEEEEeCCCCC-CCC-CCCCC-----CCCCCHH
Q 021282 9 IKVQGLNLHIAEAGADADAHVVVFLHGFPE-IWYSWRHQMVGVATAGFRAIAPDCRGY-GLS-DPPAE-----PEKTSFQ 80 (314)
Q Consensus 9 ~~~~g~~i~~~~~g~~~~~p~vlllHG~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~-G~S-~~~~~-----~~~~~~~ 80 (314)
.+++|.+-++. |+..++..||++--+-+ +..+=+..+..++..||.|+.||+-+= -.| +.... ....+.+
T Consensus 23 ~~v~gldaYv~--gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~ 100 (242)
T KOG3043|consen 23 EEVGGLDAYVV--GSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPP 100 (242)
T ss_pred EeecCeeEEEe--cCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcc
Confidence 45566555543 43333446666663332 222345567778888999999998632 011 10100 0123455
Q ss_pred HHHHHHHHHHHHh---C-CceEEEEEeCchHHHHHHHHHhcccceeeeEE
Q 021282 81 DMVDDLLAILDHL---G-LAKVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (314)
Q Consensus 81 ~~a~d~~~~~~~l---~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl 126 (314)
..-.++..+++.| | .+++-++|..|||.++..+....| .+.+.+.
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~ 149 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVS 149 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeE
Confidence 5667777777766 4 457889999999999888888777 4555553
No 124
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.82 E-value=1.5e-08 Score=81.53 Aligned_cols=100 Identities=26% Similarity=0.347 Sum_probs=71.3
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEE
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVF 99 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~a~d~~~~~~~l-------~~~~~~ 99 (314)
|.|+|+|||......|..++..++..||-||++++-.--. +... +--+....++.+..-+..+ +++++.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 7899999999998888889999999999999999985321 2111 1112233333343333332 356899
Q ss_pred EEEeCchHHHHHHHHHhcc--cceeeeEEecCC
Q 021282 100 LVAKDFGALTAYMFAIQHQ--ERVSGVITLGVP 130 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~~p--~~v~~lvl~~~~ 130 (314)
++|||+||-.|..+|+.+. -.+.+||.+|+.
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 9999999999999999874 246777777753
No 125
>PRK04940 hypothetical protein; Provisional
Probab=98.82 E-value=3.3e-07 Score=70.91 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=50.4
Q ss_pred EEEEcCCCCChhc--hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-C---CceEEEEEe
Q 021282 30 VVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-G---LAKVFLVAK 103 (314)
Q Consensus 30 vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l-~---~~~~~lvGh 103 (314)
||+||||..|..+ .+... +. .+.+|.+=+-.| ..+...-++.+.++++.+ . .+++.|||.
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~--l~-----~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQ--LQ-----FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHh--he-----eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999998887 64322 21 112232222111 022333344455555432 1 257899999
Q ss_pred CchHHHHHHHHHhcccceeeeEEecCC
Q 021282 104 DFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 104 S~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|+||+-|..+|.++. +++ |++++.
T Consensus 68 SLGGyyA~~La~~~g--~~a-VLiNPA 91 (180)
T PRK04940 68 GLGGYWAERIGFLCG--IRQ-VIFNPN 91 (180)
T ss_pred ChHHHHHHHHHHHHC--CCE-EEECCC
Confidence 999999999999985 544 457754
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.79 E-value=4.4e-08 Score=75.82 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=69.4
Q ss_pred EEEEEeccCCCCCceEEEEcCCC---CChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021282 15 NLHIAEAGADADAHVVVFLHGFP---EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 91 (314)
Q Consensus 15 ~i~~~~~g~~~~~p~vlllHG~~---~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~ 91 (314)
+-.+-.||++...|..||+||.- ++...=..++..+...||+|.+. |||.+.. ..+++....++...++
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q-----~htL~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQ-----VHTLEQTMTQFTHGVN 126 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCcc-----cccHHHHHHHHHHHHH
Confidence 44566778655568999999963 22222223444556779999987 5777632 2356666666655444
Q ss_pred Hh-----CCceEEEEEeCchHHHHHHHHHh-cccceeeeEEecC
Q 021282 92 HL-----GLAKVFLVAKDFGALTAYMFAIQ-HQERVSGVITLGV 129 (314)
Q Consensus 92 ~l-----~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lvl~~~ 129 (314)
.. ..+++.+-|||-|+.+|.....+ +..++.++++.++
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 32 34556677999999998866554 4568888887654
No 127
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.70 E-value=3.8e-07 Score=73.70 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=68.4
Q ss_pred CceEEEEcCCCCChhchHHH--HHHHhh-CCcEEEEeCCCCCCCC----CCCC--CC-CCCCHHHHHHHHHHHHHHhCCc
Q 021282 27 AHVVVFLHGFPEIWYSWRHQ--MVGVAT-AGFRAIAPDCRGYGLS----DPPA--EP-EKTSFQDMVDDLLAILDHLGLA 96 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~--~~~l~~-~~~~vi~~D~~G~G~S----~~~~--~~-~~~~~~~~a~d~~~~~~~l~~~ 96 (314)
.|.||++||.+++...+... +..+++ +||-|+.|+...-..+ .+.. .. ..-....++.-+..++++.+++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 48899999999988776532 223444 4789999986532111 1100 00 0112223333344455555554
Q ss_pred --eEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 97 --KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 97 --~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
++++.|+|.||..+..+++.+|++++++...++.
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 7999999999999999999999999998877643
No 128
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.69 E-value=2.5e-06 Score=66.25 Aligned_cols=94 Identities=23% Similarity=0.269 Sum_probs=69.7
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEeC
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAKD 104 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----~~~~~~lvGhS 104 (314)
-+||+-|=++=...=..++..|.++|+.|+.+|-+=|=.+.+ |.++.+.|+.++++.. +.+++.|||.|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 355555433322111346778999999999999988877643 5678888888888776 67899999999
Q ss_pred chHHHHHHHHHhcc----cceeeeEEecC
Q 021282 105 FGALTAYMFAIQHQ----ERVSGVITLGV 129 (314)
Q Consensus 105 ~Gg~va~~~a~~~p----~~v~~lvl~~~ 129 (314)
+|+-|.-....+-| ++|+.++|+++
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEecc
Confidence 99988877777666 47888888864
No 129
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.69 E-value=1.8e-07 Score=75.53 Aligned_cols=93 Identities=17% Similarity=0.131 Sum_probs=70.6
Q ss_pred EEcC--CCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCceEEEEEeCchHH
Q 021282 32 FLHG--FPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-HLGLAKVFLVAKDFGAL 108 (314)
Q Consensus 32 llHG--~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~-~l~~~~~~lvGhS~Gg~ 108 (314)
++|+ .+++...|..+...+.. .++|+++|++|+|.++.. ..+++.+++.+.+.+. ..+..+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL----PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 3454 33677789888877754 699999999999976543 2467788777665444 44567899999999999
Q ss_pred HHHHHHHhc---ccceeeeEEecC
Q 021282 109 TAYMFAIQH---QERVSGVITLGV 129 (314)
Q Consensus 109 va~~~a~~~---p~~v~~lvl~~~ 129 (314)
++..++.+. ++.+.++++++.
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEcc
Confidence 999999863 567899988875
No 130
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.68 E-value=8.5e-08 Score=83.21 Aligned_cols=99 Identities=21% Similarity=0.272 Sum_probs=79.6
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcE---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeC
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS 104 (314)
-|++++||+..+...|..+...+...++. +++++.++-. ...+ ..-.-+.+..-+.+++...+-+++.|+|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~---~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-GTYS---LAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-CCcc---ccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 49999999998988998877667666777 8999988762 1111 123456667777777777888999999999
Q ss_pred chHHHHHHHHHhcc--cceeeeEEecCC
Q 021282 105 FGALTAYMFAIQHQ--ERVSGVITLGVP 130 (314)
Q Consensus 105 ~Gg~va~~~a~~~p--~~v~~lvl~~~~ 130 (314)
|||.++..++...+ .+|++++.+++|
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999999998 899999999865
No 131
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.65 E-value=1.2e-07 Score=77.91 Aligned_cols=103 Identities=21% Similarity=0.230 Sum_probs=64.9
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHh-hCCc--EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceE
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVA-TAGF--RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKV 98 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~-~~~~--~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----~~~~~ 98 (314)
++..+||||||..+...-..-+..+. ..++ .+|.+.+|..|.-.. ...+..+...-+..+.++++.| +.+++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~-Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG-YFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh-hhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 46899999999988554322221122 1123 899999999986321 1011123344455555555554 67799
Q ss_pred EEEEeCchHHHHHHHHHhc----c-----cceeeeEEecC
Q 021282 99 FLVAKDFGALTAYMFAIQH----Q-----ERVSGVITLGV 129 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~----p-----~~v~~lvl~~~ 129 (314)
+|++||||+.+.+.....- + .++..+++.++
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 9999999999999876542 1 25667777653
No 132
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.65 E-value=1.5e-07 Score=76.46 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=50.4
Q ss_pred CceEEEEcCCCCChhchHHHHHHHh---hC-CcEEEEeCCCCCC-----CCCC------------C-----CC----CCC
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVA---TA-GFRAIAPDCRGYG-----LSDP------------P-----AE----PEK 76 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~---~~-~~~vi~~D~~G~G-----~S~~------------~-----~~----~~~ 76 (314)
++-||+|||++.|...|..+...|- .+ ++..+.+|=|--= .... + .. ...
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 6789999999999999987665443 33 6888888754221 1100 0 00 012
Q ss_pred CCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 77 TSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 77 ~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
..+++..+.+.+++++.|- =.-|+|.|.||.+|..+++..
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHH
Confidence 2466777778888877762 245899999999999998754
No 133
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.64 E-value=2.5e-07 Score=79.33 Aligned_cols=101 Identities=21% Similarity=0.283 Sum_probs=61.3
Q ss_pred CceEEEEcCCCCChhc--------------h----HHHHHHHhhCCcEEEEeCCCCCCCCCCCCC---CCCCCHHHH---
Q 021282 27 AHVVVFLHGFPEIWYS--------------W----RHQMVGVATAGFRAIAPDCRGYGLSDPPAE---PEKTSFQDM--- 82 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~--------------~----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~--- 82 (314)
.|.||++||-++.... | ......|+.+||-|+++|.+|+|....... ...++...+
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4889999997755422 1 123567888999999999999998755431 112332333
Q ss_pred ------------HHHHHHHHHHhC------CceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 83 ------------VDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 83 ------------a~d~~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
+-|....+|.|. -+++.++|+||||..++.+|+.. ++|++.|..+
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 223344555553 25799999999999999999986 5888888665
No 134
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.63 E-value=1.4e-07 Score=76.72 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=51.2
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhh--CCcEEEEeCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHhCCc--eE
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQD----MVDDLLAILDHLGLA--KV 98 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~----~a~d~~~~~~~l~~~--~~ 98 (314)
...|||+||+.++...|......+.. +.+.--.+...++-..... ...+++. ++++|.+.++....+ ++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccc
Confidence 46899999999999999876555544 1222122222232211110 0123444 455555555544543 89
Q ss_pred EEEEeCchHHHHHHHHH
Q 021282 99 FLVAKDFGALTAYMFAI 115 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~ 115 (314)
++|||||||.|+..+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999976554
No 135
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=3.8e-06 Score=80.33 Aligned_cols=123 Identities=16% Similarity=0.225 Sum_probs=84.9
Q ss_pred ceeeeeeCCEEEEEEeccC---C-CCC-ceEEEEcCCCCC-------hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCC-
Q 021282 5 EHKFIKVQGLNLHIAEAGA---D-ADA-HVVVFLHGFPEI-------WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP- 71 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~---~-~~~-p~vlllHG~~~~-------~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~- 71 (314)
+...+..+|...+|...-+ + .++ |.|+.+||.|++ ...|..+ .....|+-|+.+|-||-|...+.
T Consensus 499 ~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhH
Confidence 4456677999998875442 1 123 678888999963 2335544 34466999999999999976442
Q ss_pred -----CCCCCCCHHHHHHHHHHHHHHh--CCceEEEEEeCchHHHHHHHHHhcccceeee-EEecC
Q 021282 72 -----AEPEKTSFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQHQERVSGV-ITLGV 129 (314)
Q Consensus 72 -----~~~~~~~~~~~a~d~~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l-vl~~~ 129 (314)
..-....+.++..-+..+++.. +-+++.+.|+|.||+++..++...|+.+-+. +.+++
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaP 642 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAP 642 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecc
Confidence 1112345666666666666654 3457999999999999999999999777665 55543
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.61 E-value=1.4e-07 Score=76.48 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHh-CC--ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 82 MVDDLLAILDHL-GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 82 ~a~d~~~~~~~l-~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+-++..+++... .+ +++.|+|.|.||-+|+.+|+++| .|+++|.++++
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 445555666554 33 58999999999999999999999 79999988754
No 137
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.57 E-value=6.5e-06 Score=72.88 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=66.9
Q ss_pred CCCceEEEE-----c--CCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Q 021282 25 ADAHVVVFL-----H--GFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---- 93 (314)
Q Consensus 25 ~~~p~vlll-----H--G~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l---- 93 (314)
+.++|+|.+ | |.++-...= .+...| ..|+.||.+...- + |. ..-|+.+.+.-..+|++++
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dS-evG~AL-~~GHPvYFV~F~p----~-P~--pgQTl~DV~~ae~~Fv~~V~~~h 136 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDS-EVGVAL-RAGHPVYFVGFFP----E-PE--PGQTLEDVMRAEAAFVEEVAERH 136 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCccc-HHHHHH-HcCCCeEEEEecC----C-CC--CCCcHHHHHHHHHHHHHHHHHhC
Confidence 455666666 3 333333211 233344 4589999886641 1 11 2347888777777777765
Q ss_pred -CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCC
Q 021282 94 -GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (314)
Q Consensus 94 -~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 131 (314)
+..|..|||++-||+-++.+|+.+|+++.-+|+-|+|.
T Consensus 137 p~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 137 PDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 23488999999999999999999999999999877653
No 138
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.57 E-value=1.5e-06 Score=73.15 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=74.4
Q ss_pred eeeeCCEEEEEEecc--CCCCCceEEEEcCCCCChhch------HHHHHHHh-hCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 021282 8 FIKVQGLNLHIAEAG--ADADAHVVVFLHGFPEIWYSW------RHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (314)
Q Consensus 8 ~~~~~g~~i~~~~~g--~~~~~p~vlllHG~~~~~~~~------~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (314)
.++.|++.|--.... +.+...+||+.-|.++.-+.- +..+..++ ..+-+|+.+.+||.|.|..+. +
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s 190 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----S 190 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----C
Confidence 455688877654333 223467999999998776651 11223333 347899999999999997543 4
Q ss_pred HHHHHHHHHHHHHHhC-----C--ceEEEEEeCchHHHHHHHHHhc
Q 021282 79 FQDMVDDLLAILDHLG-----L--AKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~-----~--~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
..+++.|-.+.++.|. + +++.+-|||+||.|+.....++
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 5788888888777772 2 5799999999999998855554
No 139
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.54 E-value=3.7e-07 Score=74.11 Aligned_cols=91 Identities=23% Similarity=0.362 Sum_probs=59.9
Q ss_pred EEEEcCCC---CChhchHHHHHHHhh-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----H-----hCCc
Q 021282 30 VVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD----H-----LGLA 96 (314)
Q Consensus 30 vlllHG~~---~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~----~-----l~~~ 96 (314)
||++||.+ ++..........++. .|+.|+.+|.|=. |. .++.+..+|+.+.++ . .+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PE----APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TT----SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----cc----ccccccccccccceeeecccccccccccc
Confidence 79999865 344444445566664 7999999999943 21 234455555555444 3 3356
Q ss_pred eEEEEEeCchHHHHHHHHHhcccc----eeeeEEecC
Q 021282 97 KVFLVAKDFGALTAYMFAIQHQER----VSGVITLGV 129 (314)
Q Consensus 97 ~~~lvGhS~Gg~va~~~a~~~p~~----v~~lvl~~~ 129 (314)
+++|+|+|-||.+|+.++.+..+. +++++++++
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 899999999999999999876543 888998875
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=2.3e-06 Score=70.42 Aligned_cols=122 Identities=20% Similarity=0.224 Sum_probs=80.6
Q ss_pred eeeeeeCCEEEEEEec---cCCCCCceEEEEcCCCCChhc------hHHHHHHHhhCCcEEEEeCCC-------CCCCCC
Q 021282 6 HKFIKVQGLNLHIAEA---GADADAHVVVFLHGFPEIWYS------WRHQMVGVATAGFRAIAPDCR-------GYGLSD 69 (314)
Q Consensus 6 ~~~~~~~g~~i~~~~~---g~~~~~p~vlllHG~~~~~~~------~~~~~~~l~~~~~~vi~~D~~-------G~G~S~ 69 (314)
...+.++|.+..|+.. |.+.+.|.||+|||-.++..- |+.+++ .+||=|+.||-- |.|.+-
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd---~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALAD---REGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhc---ccCcEEECcCccccccCCCcccccC
Confidence 3456667777666543 222345789999998876543 554433 348999999532 222232
Q ss_pred CCCC-C-CCCCHHHHHHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 70 PPAE-P-EKTSFQDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 70 ~~~~-~-~~~~~~~~a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.+.. . ..-.+..+++-+..++.+.+++ +|++.|.|-||..+..+++.+|+.+.++..+.+.
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 1211 1 1123444555555666666887 7999999999999999999999999999988654
No 141
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.49 E-value=1.2e-05 Score=63.45 Aligned_cols=60 Identities=23% Similarity=0.496 Sum_probs=42.7
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccCh--HHHHHHHHHHHh
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSP--EEVNQLILTFLN 311 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 311 (314)
.|++|+|-|.|+.|.+++... +..+.+.++++.+..-| +||+++-.++ +.+++.|..|++
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~------s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSER------SEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCCeeEEecccceeecchH------HHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 589999999999999987543 34456677888555555 7999998774 345555555443
No 142
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.43 E-value=8.8e-05 Score=63.86 Aligned_cols=100 Identities=19% Similarity=0.175 Sum_probs=68.6
Q ss_pred CCceEEEEcCCC---C--ChhchHHHHHHHh-hCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h--
Q 021282 26 DAHVVVFLHGFP---E--IWYSWRHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH----L-- 93 (314)
Q Consensus 26 ~~p~vlllHG~~---~--~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~----l-- 93 (314)
..|.||++||.+ + ++..++.+...++ ..+..|+++|+|=-=... .+..+++-.+.+.-+.+. +
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCC
Confidence 458999999876 2 3556776666664 348899999999543332 223444544445444443 2
Q ss_pred CCceEEEEEeCchHHHHHHHHHhc------ccceeeeEEecCC
Q 021282 94 GLAKVFLVAKDFGALTAYMFAIQH------QERVSGVITLGVP 130 (314)
Q Consensus 94 ~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lvl~~~~ 130 (314)
+-+++.|+|-|-||.+|..+|.+. +-++++.+++-+.
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 456899999999999999888754 3578899988643
No 143
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.37 E-value=6.4e-06 Score=64.52 Aligned_cols=99 Identities=16% Similarity=0.319 Sum_probs=69.9
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCC--------CCCCCCCC--------CCCCCCCHHHHHHHHHHHHH
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCR--------GYGLSDPP--------AEPEKTSFQDMVDDLLAILD 91 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~--------G~G~S~~~--------~~~~~~~~~~~a~d~~~~~~ 91 (314)
-.||++||.+++...|...+..|.-.+-..|+|-.| |.+...+- ...+.-++...++-+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 479999999999999987777665557778887433 22211110 00122356677777777777
Q ss_pred Hh---CC--ceEEEEEeCchHHHHHHHHHhcccceeeeEE
Q 021282 92 HL---GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (314)
Q Consensus 92 ~l---~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl 126 (314)
+. |+ +++.+-|.||||.+|+..+..+|..+.++.-
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~ 123 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFA 123 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeec
Confidence 64 33 4688999999999999999999877776663
No 144
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=3.4e-05 Score=69.83 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=74.2
Q ss_pred CceEEEEcCCCCC-----hhchHHHH--HHHhhCCcEEEEeCCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHh
Q 021282 27 AHVVVFLHGFPEI-----WYSWRHQM--VGVATAGFRAIAPDCRGYGLSDPP------AEPEKTSFQDMVDDLLAILDHL 93 (314)
Q Consensus 27 ~p~vlllHG~~~~-----~~~~~~~~--~~l~~~~~~vi~~D~~G~G~S~~~------~~~~~~~~~~~a~d~~~~~~~l 93 (314)
=|+++++=|.|+- +.-|-..+ ..|+..||-|+.+|.||.-..... .......+++.++-+.-++|+.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4899999999853 22222222 257778999999999997654322 1222346788888888888887
Q ss_pred C---CceEEEEEeCchHHHHHHHHHhcccceeeeE
Q 021282 94 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (314)
Q Consensus 94 ~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 125 (314)
| .+++.+-|||+||++++....++|+.++..|
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 5 5789999999999999999999999777555
No 145
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.27 E-value=2.9e-06 Score=70.86 Aligned_cols=104 Identities=12% Similarity=0.156 Sum_probs=64.1
Q ss_pred CCceEEEEcCCCCChhchH--HHHHHHhhCC----cEEEEeCCCCCCCC--CCC--------CCCCC--CCH-HHHHHHH
Q 021282 26 DAHVVVFLHGFPEIWYSWR--HQMVGVATAG----FRAIAPDCRGYGLS--DPP--------AEPEK--TSF-QDMVDDL 86 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~--~~~~~l~~~~----~~vi~~D~~G~G~S--~~~--------~~~~~--~~~-~~~a~d~ 86 (314)
.-|.|+++||.......|. ..+..+..++ .-+|+++..+.+.- .+. ..... ..+ .-+.++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 3488999999733322232 2233333332 45677777666611 111 00001 112 3455677
Q ss_pred HHHHHHh-CCce--EEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 87 LAILDHL-GLAK--VFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 87 ~~~~~~l-~~~~--~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
...++.- .+.+ ..|+|+||||..|+.++.++|+.+.+++.+++
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSG 148 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESE
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCc
Confidence 7666643 4333 58999999999999999999999999998874
No 146
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.22 E-value=9.9e-06 Score=65.14 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=73.3
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCC-----cEEEEeCCCCC----CCCCC----C-----CCCCCCCHHHHHHHHHHH
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAG-----FRAIAPDCRGY----GLSDP----P-----AEPEKTSFQDMVDDLLAI 89 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~-----~~vi~~D~~G~----G~S~~----~-----~~~~~~~~~~~a~d~~~~ 89 (314)
-|.||+||++++..+....+..|...+ -=++..|--|- |.=+. | -+....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 489999999999999999888887642 12455555551 11011 0 011123566677777777
Q ss_pred HHHh----CCceEEEEEeCchHHHHHHHHHhccc-----ceeeeEEecCCCC
Q 021282 90 LDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 132 (314)
Q Consensus 90 ~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvl~~~~~~ 132 (314)
|+.| ++.++.+|||||||.-...|+..+-+ -+..+|.++++..
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7766 68899999999999999999987632 4788888886543
No 147
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.21 E-value=3.5e-05 Score=69.78 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=68.1
Q ss_pred CCceEEEEcCCCCChhc-h--HHHHHHHhhC-CcEEEEeCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhC--
Q 021282 26 DAHVVVFLHGFPEIWYS-W--RHQMVGVATA-GFRAIAPDCRGYGLSDPPAE-----PEKTSFQDMVDDLLAILDHLG-- 94 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~-~--~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~a~d~~~~~~~l~-- 94 (314)
++|.+|++ |.-++... | ...+..|+++ |--||++.+|=||+|.+... ...-|.++...|+..|++.+.
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 36666655 44333322 2 1233345443 67899999999999976421 123488888999999988774
Q ss_pred -----CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 95 -----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 95 -----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
-.|++++|-|+||.+|..+-.+||+.+.+.+..++|..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 13799999999999999999999999999998776654
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.20 E-value=7.3e-06 Score=68.69 Aligned_cols=95 Identities=17% Similarity=0.241 Sum_probs=64.5
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhC--CceEEEEEeC
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI-LDHLG--LAKVFLVAKD 104 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~-~~~l~--~~~~~lvGhS 104 (314)
.-||+.-|..+--+. .++...++.||.|+.+.+||++.|...+-+ ..-...+|.+..| +..|| .+.++|.|||
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p--~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYP--VNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCc--ccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 356666665543221 122334466999999999999999765432 2222334444443 44555 4679999999
Q ss_pred chHHHHHHHHHhcccceeeeEEe
Q 021282 105 FGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 105 ~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
.||.-+...|..||+ |+++||=
T Consensus 320 IGGF~~~waAs~YPd-VkavvLD 341 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLD 341 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEee
Confidence 999999999999997 9999853
No 149
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.18 E-value=4e-05 Score=68.40 Aligned_cols=114 Identities=16% Similarity=0.225 Sum_probs=69.2
Q ss_pred EEEEEEeccC--CCCCceEEEEcCCC--CChhchHHHHHHHhhCC----cEEEEeCCCCCC-CCCCCCCCCCCCHHHHHH
Q 021282 14 LNLHIAEAGA--DADAHVVVFLHGFP--EIWYSWRHQMVGVATAG----FRAIAPDCRGYG-LSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 14 ~~i~~~~~g~--~~~~p~vlllHG~~--~~~~~~~~~~~~l~~~~----~~vi~~D~~G~G-~S~~~~~~~~~~~~~~a~ 84 (314)
.++.++.... .+.-|.|+|+||-. .....+ ..+..|.+.| .-|+.+|..+-. ++..... ...-...+++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~ 271 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQ 271 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHH
Confidence 4555555432 12358899999854 222222 2344555544 346788863211 1111000 0011334567
Q ss_pred HHHHHHHHh-----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 85 DLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 85 d~~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
++.-.+++. +-++..|+|+||||..|+.++.++|+++.+++.+++
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecc
Confidence 777777764 234688999999999999999999999999998864
No 150
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.16 E-value=8.2e-05 Score=59.80 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=90.3
Q ss_pred ceeeeeeCCEEEEEEecc-----CCCCCceEEEEcCCCCChhchHHHHHHHhhC---CcEEEEeCCCCCCCCC---C--C
Q 021282 5 EHKFIKVQGLNLHIAEAG-----ADADAHVVVFLHGFPEIWYSWRHQMVGVATA---GFRAIAPDCRGYGLSD---P--P 71 (314)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g-----~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~---~~~vi~~D~~G~G~S~---~--~ 71 (314)
..++++.+|..+.....| ...+++.++++.|.|+...-|.+.+..|... .++++.+..-||-.-. . +
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 345666777666655444 2235788999999999999888877765532 2669999998887532 0 0
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhC--CceEEEEEeCchHHHHHHHHHhc-c-cceeeeEEecC
Q 021282 72 --AEPEKTSFQDMVDDLLAILDHLG--LAKVFLVAKDFGALTAYMFAIQH-Q-ERVSGVITLGV 129 (314)
Q Consensus 72 --~~~~~~~~~~~a~d~~~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~-p-~~v~~lvl~~~ 129 (314)
...+-++++++++--.+|+++.- ..|++++|||-|++..+.+.-.. + -+|++.+++-+
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 11235799999999999999873 45899999999999999988732 2 46788777644
No 151
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.15 E-value=5.3e-05 Score=65.48 Aligned_cols=99 Identities=17% Similarity=0.153 Sum_probs=64.6
Q ss_pred CCceEEEEcCCC---CChhch-HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--Cc
Q 021282 26 DAHVVVFLHGFP---EIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LG--LA 96 (314)
Q Consensus 26 ~~p~vlllHG~~---~~~~~~-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~--~~ 96 (314)
..|.||++||.+ ++.... ..+...+...|+.|+++|+|---.... ...+++..+-+.-+.+. ++ -+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----PAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----CchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 479999999875 444444 344444556799999999996543322 22344433333333333 34 45
Q ss_pred eEEEEEeCchHHHHHHHHHhccc----ceeeeEEecC
Q 021282 97 KVFLVAKDFGALTAYMFAIQHQE----RVSGVITLGV 129 (314)
Q Consensus 97 ~~~lvGhS~Gg~va~~~a~~~p~----~v~~lvl~~~ 129 (314)
++.++|+|-||.++..++..-.+ ...+.+++.+
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P 189 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISP 189 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 79999999999999999987654 3566666654
No 152
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.13 E-value=3.3e-05 Score=58.87 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=63.8
Q ss_pred ceEEEEcCCCCCh-hchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCch
Q 021282 28 HVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~G 106 (314)
+.+|.+||..+|. ..|....+.-+. .+-.+++. +...-..+++++.+.+-+... -++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 5789999998765 447765443211 11122221 122346788888888777777 346999999999
Q ss_pred HHHHHHHHHhcccceeeeEEecCC
Q 021282 107 ALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 107 g~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.++..++......|+|+.|++++
T Consensus 70 c~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCC
Confidence 999999999887799999999764
No 153
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=98.09 E-value=7e-06 Score=58.71 Aligned_cols=45 Identities=20% Similarity=0.479 Sum_probs=28.5
Q ss_pred ccceeeeeeCCEEEEEEe-ccCCCCCceEEEEcCCCCChhchHHHH
Q 021282 3 QIEHKFIKVQGLNLHIAE-AGADADAHVVVFLHGFPEIWYSWRHQM 47 (314)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~-~g~~~~~p~vlllHG~~~~~~~~~~~~ 47 (314)
++.+-.++++|.+||+.+ .++.+++.||||+||||+|...|..++
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 445556778999999865 445557889999999999998887653
No 154
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.08 E-value=4.1e-05 Score=65.18 Aligned_cols=84 Identities=24% Similarity=0.266 Sum_probs=50.6
Q ss_pred HHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---ceEEEEEeCchHHHHHHHHHhc----c
Q 021282 46 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAIQH----Q 118 (314)
Q Consensus 46 ~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~----p 118 (314)
.+..++++||-|+++|+.|.|..-.......+++-+.++-..++...+|+ .++.+.|||-||.-++..|... |
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 44567788999999999999972211111122333333333333333343 4799999999999887655432 5
Q ss_pred cc---eeeeEEecC
Q 021282 119 ER---VSGVITLGV 129 (314)
Q Consensus 119 ~~---v~~lvl~~~ 129 (314)
|. +.+.+..++
T Consensus 98 eL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 98 ELNRDLVGAAAGGP 111 (290)
T ss_pred ccccceeEEeccCC
Confidence 54 556665443
No 155
>COG3150 Predicted esterase [General function prediction only]
Probab=98.04 E-value=1.9e-05 Score=59.42 Aligned_cols=88 Identities=20% Similarity=0.316 Sum_probs=65.7
Q ss_pred EEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHH
Q 021282 30 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 109 (314)
Q Consensus 30 vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~v 109 (314)
||+||||..|..+.+.++. . ..+..|.|-.+.|.+.. .......++.+..++..++-+...|||-|.||+.
T Consensus 2 ilYlHGFnSSP~shka~l~--~----q~~~~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLL--L----QFIDEDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHHH--H----HHHhccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 8999999999988876532 1 12334455555554332 2468899999999999999888999999999999
Q ss_pred HHHHHHhcccceeeeEEecC
Q 021282 110 AYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 110 a~~~a~~~p~~v~~lvl~~~ 129 (314)
|..++.++ -+++++ +++
T Consensus 73 At~l~~~~--Girav~-~NP 89 (191)
T COG3150 73 ATWLGFLC--GIRAVV-FNP 89 (191)
T ss_pred HHHHHHHh--CChhhh-cCC
Confidence 99999987 356555 443
No 156
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.04 E-value=8.2e-05 Score=61.38 Aligned_cols=114 Identities=17% Similarity=0.229 Sum_probs=69.8
Q ss_pred CCEEEEEEecc-----CCCCC-ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCC---C----CCCCCCCCCC-
Q 021282 12 QGLNLHIAEAG-----ADADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG---L----SDPPAEPEKT- 77 (314)
Q Consensus 12 ~g~~i~~~~~g-----~~~~~-p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G---~----S~~~~~~~~~- 77 (314)
-|.++-|...- ++++- |-|||+||.+..+..=+.+ +. .|.--|+++.|-++ . +..-...+..
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~-sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t 245 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LS-SGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT 245 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hh-cCccceeeecccCceEEEccccccccccccccc
Confidence 45567775433 22334 8899999998765543322 32 24556666666665 1 1000000110
Q ss_pred --CHHHHHHHHH-HHHHHhCCc--eEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 78 --SFQDMVDDLL-AILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 78 --~~~~~a~d~~-~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
-.....+-+. .+.++.+++ ++.++|.|+||.-++.++.++|+.+++.+++++
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 1222333333 344555654 699999999999999999999999999998864
No 157
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.00 E-value=3.5e-05 Score=65.43 Aligned_cols=104 Identities=18% Similarity=0.201 Sum_probs=67.6
Q ss_pred CCCceEEEEcCCCCChhc--hH-HHHHHHhhCCcEEEEeCCCCCCCCCC-C--CCCCCCCHHHHHHHHHHHHHHhCCceE
Q 021282 25 ADAHVVVFLHGFPEIWYS--WR-HQMVGVATAGFRAIAPDCRGYGLSDP-P--AEPEKTSFQDMVDDLLAILDHLGLAKV 98 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~--~~-~~~~~l~~~~~~vi~~D~~G~G~S~~-~--~~~~~~~~~~~a~d~~~~~~~l~~~~~ 98 (314)
+++..+||+||+..+... ++ .++.+-..-..-.|.+.+|--|.--. . .+...|+-.+++.-|..+.+....+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 346799999999866432 22 12222222246788999998775311 0 111246667777777777777788999
Q ss_pred EEEEeCchHHHHHHHHHh--------cccceeeeEEec
Q 021282 99 FLVAKDFGALTAYMFAIQ--------HQERVSGVITLG 128 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~--------~p~~v~~lvl~~ 128 (314)
+|++||||.++.+..... -+.+++.+|+-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAa 231 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAA 231 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeC
Confidence 999999999999876542 233566666643
No 158
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.96 E-value=3.5e-05 Score=69.83 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=81.5
Q ss_pred eeee-CCEEEEEEeccCC--CCCceEEEEcCCCCChhc---h--HHHHH---HHhhCCcEEEEeCCCCCCCCCCCCCCCC
Q 021282 8 FIKV-QGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS---W--RHQMV---GVATAGFRAIAPDCRGYGLSDPPAEPEK 76 (314)
Q Consensus 8 ~~~~-~g~~i~~~~~g~~--~~~p~vlllHG~~~~~~~---~--~~~~~---~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 76 (314)
.|.. ||++|+..++-+. ...|+++..+=+|-...+ + ....+ .+++.||-||..|.||.|.|+..-+..
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~- 101 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE- 101 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee-
Confidence 4555 9999997665432 235778888844433331 1 11122 366789999999999999998754321
Q ss_pred CCHHHHHHHHHHHHHHh---C--CceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 77 TSFQDMVDDLLAILDHL---G--LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 77 ~~~~~~a~d~~~~~~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
++ +-++|-.+.|+-+ . -.+|..+|.|++|...+.+|+..|..++.++-+.+
T Consensus 102 ~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 102 SS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred cc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 22 3444555555544 2 34799999999999999999999999999886653
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.95 E-value=8.9e-05 Score=65.90 Aligned_cols=109 Identities=19% Similarity=0.343 Sum_probs=68.6
Q ss_pred eCCEEEEEEeccCCCCCceEEEEc-CCCCChhchHHHHHHHhhCCcEE-----EE-eCCCCCCCCCCCCCCCCCCHHHHH
Q 021282 11 VQGLNLHIAEAGADADAHVVVFLH-GFPEIWYSWRHQMVGVATAGFRA-----IA-PDCRGYGLSDPPAEPEKTSFQDMV 83 (314)
Q Consensus 11 ~~g~~i~~~~~g~~~~~p~vlllH-G~~~~~~~~~~~~~~l~~~~~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~a 83 (314)
..|+.+.+-..|. --.|-.+- .+......|..+++.|...||.. .+ ||.|=- . ...+++.
T Consensus 37 ~~gv~i~~~~~g~---~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~--------~--~~~~~~~ 103 (389)
T PF02450_consen 37 DPGVEIRVPGFGG---TSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLS--------P--AERDEYF 103 (389)
T ss_pred CCCceeecCCCCc---eeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhc--------h--hhHHHHH
Confidence 3666666655552 11222222 22222227899999998877642 22 566611 0 1234556
Q ss_pred HHHHHHHHHh---CCceEEEEEeCchHHHHHHHHHhccc------ceeeeEEecCCCC
Q 021282 84 DDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQE------RVSGVITLGVPIL 132 (314)
Q Consensus 84 ~d~~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lvl~~~~~~ 132 (314)
..+.+++|.. ..+|++||||||||.++..+....+. .|+++|.+++|..
T Consensus 104 ~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 104 TKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 6666666554 35799999999999999999988743 5999999987654
No 160
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.94 E-value=0.00012 Score=60.89 Aligned_cols=41 Identities=27% Similarity=0.306 Sum_probs=36.7
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCC
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGL 67 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~ 67 (314)
=|.|||.||++++-..|...--.|+..||-|.++.+|-+--
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcc
Confidence 38999999999999999888788999999999999987654
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=97.91 E-value=5.8e-05 Score=63.21 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=63.6
Q ss_pred CceEEEEcCCC--CChhchHHHHHHHhh-CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEEE
Q 021282 27 AHVVVFLHGFP--EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVFL 100 (314)
Q Consensus 27 ~p~vlllHG~~--~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~~~~~~l 100 (314)
..|||+.||.+ ++...+..+.+.+.+ .++.+..+- .|-|.. ......+.++++.+.+-+.. |. +-+++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~----~s~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ----DSLFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc----cccccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 46999999999 555566666554431 255444443 232221 11112455555555444433 33 35999
Q ss_pred EEeCchHHHHHHHHHhccc--ceeeeEEecCC
Q 021282 101 VAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (314)
Q Consensus 101 vGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~ 130 (314)
||+|-||.++..++.+.|+ .|+.+|.++++
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999987 49999999865
No 162
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.90 E-value=0.00014 Score=65.43 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=82.6
Q ss_pred eeeeeeC---CEEEEEEecc---CCCCCceEEEEcCCCCChhchHHHHH----HHh--------------hCCcEEEEeC
Q 021282 6 HKFIKVQ---GLNLHIAEAG---ADADAHVVVFLHGFPEIWYSWRHQMV----GVA--------------TAGFRAIAPD 61 (314)
Q Consensus 6 ~~~~~~~---g~~i~~~~~g---~~~~~p~vlllHG~~~~~~~~~~~~~----~l~--------------~~~~~vi~~D 61 (314)
..+++++ +.+++|+-.. +.++.|.||.+.|.|+++..|....+ .+. .+..+++.+|
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD 92 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFID 92 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE-
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEe
Confidence 5677776 7788886433 23457999999999999988854322 011 1237899999
Q ss_pred CC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHHh----c------cccee
Q 021282 62 CR-GYGLSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQ----H------QERVS 122 (314)
Q Consensus 62 ~~-G~G~S~~~~~~-~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~------p~~v~ 122 (314)
+| |.|.|...... ...+.++.|+|+.+++... .-.+++|.|-|+||..+-.+|.. . +-.++
T Consensus 93 ~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp -STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred ecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 55 99999654332 2457889999999988875 44589999999999876666543 3 23488
Q ss_pred eeEEecCC
Q 021282 123 GVITLGVP 130 (314)
Q Consensus 123 ~lvl~~~~ 130 (314)
++++.++.
T Consensus 173 Gi~IGng~ 180 (415)
T PF00450_consen 173 GIAIGNGW 180 (415)
T ss_dssp EEEEESE-
T ss_pred cceecCcc
Confidence 98877654
No 163
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.84 E-value=0.00015 Score=66.94 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=71.1
Q ss_pred CCEEEEEEeccC---CCCCceEEEEcCCC---CChhchHHHHHHHhhC-C-cEEEEeCCC----CCCCCCCCCCCCCCCH
Q 021282 12 QGLNLHIAEAGA---DADAHVVVFLHGFP---EIWYSWRHQMVGVATA-G-FRAIAPDCR----GYGLSDPPAEPEKTSF 79 (314)
Q Consensus 12 ~g~~i~~~~~g~---~~~~p~vlllHG~~---~~~~~~~~~~~~l~~~-~-~~vi~~D~~----G~G~S~~~~~~~~~~~ 79 (314)
|-..+.+..... .++.|.||++||.+ ++...+. ...|+.. + +-|++++.| |++.+.......++.+
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~--~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~ 154 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYP--GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGL 154 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCC--hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhH
Confidence 445566555321 23469999999954 3333322 1234433 3 899999999 4444332211123334
Q ss_pred HHH---HHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHh--cccceeeeEEecCCC
Q 021282 80 QDM---VDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ--HQERVSGVITLGVPI 131 (314)
Q Consensus 80 ~~~---a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~--~p~~v~~lvl~~~~~ 131 (314)
.+. .+.+.+-++..|.+ +++|+|+|-||..+..++.. .+.+++++|+.++..
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 443 33444445555654 79999999999999988876 345788888876543
No 164
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.83 E-value=0.00011 Score=68.16 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=62.8
Q ss_pred CCEEEEEEeccC--------CCCCceEEEEcCCCCChhchHHHHHHHhh----------------CCcEEEEeCCCCCCC
Q 021282 12 QGLNLHIAEAGA--------DADAHVVVFLHGFPEIWYSWRHQMVGVAT----------------AGFRAIAPDCRGYGL 67 (314)
Q Consensus 12 ~g~~i~~~~~g~--------~~~~p~vlllHG~~~~~~~~~~~~~~l~~----------------~~~~vi~~D~~G~G~ 67 (314)
+-+.++....|. +.+|-||||++|..|+...-+.++..... -.|+-.+.|.=+
T Consensus 66 ~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--- 142 (973)
T KOG3724|consen 66 DKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--- 142 (973)
T ss_pred CceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc---
Confidence 455666554442 12577999999999986654444332221 123334444321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh----CC---------ceEEEEEeCchHHHHHHHHHh---cccceeeeEEecCC
Q 021282 68 SDPPAEPEKTSFQDMVDDLLAILDHL----GL---------AKVFLVAKDFGALTAYMFAIQ---HQERVSGVITLGVP 130 (314)
Q Consensus 68 S~~~~~~~~~~~~~~a~d~~~~~~~l----~~---------~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lvl~~~~ 130 (314)
......+-++.++++-+.+-++.+ .. ..++||||||||.||..++.. .++.|.-++..++|
T Consensus 143 --e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 143 --EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred --hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 001112235555555444444332 11 139999999999999987753 24555556666654
No 165
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.72 E-value=0.00032 Score=58.95 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=62.9
Q ss_pred CceEEEEcCCCCChhc-----hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceE
Q 021282 27 AHVVVFLHGFPEIWYS-----WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKV 98 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~-----~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~~~~~ 98 (314)
..|+|+.||.+++... +..++..+ .|..++++-. |.+. .......+.++++.+.+-+.. |. +-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~--~g~~~~~i~i---g~~~--~~s~~~~~~~Qve~vce~l~~~~~l~-~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNL--SGSPGFCLEI---GNGV--GDSWLMPLTQQAEIACEKVKQMKELS-QGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhC--CCCceEEEEE---CCCc--cccceeCHHHHHHHHHHHHhhchhhh-CcE
Confidence 4699999999976554 33333221 1455555533 3331 112223556666655554443 33 359
Q ss_pred EEEEeCchHHHHHHHHHhccc--ceeeeEEecCC
Q 021282 99 FLVAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p~--~v~~lvl~~~~ 130 (314)
++||+|-||.++..++.+.|+ .|+.+|.++++
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999999999997 59999999865
No 166
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.68 E-value=0.00024 Score=61.31 Aligned_cols=102 Identities=18% Similarity=0.227 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCChhchHH-------HHHHHhhCCcEEEEeCCCCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHH
Q 021282 28 HVVVFLHGFPEIWYSWRH-------QMVGVATAGFRAIAPDCRGYGLSDPPAEPE--------KTSFQDMVDDLLAILDH 92 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~-------~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~--------~~~~~~~a~d~~~~~~~ 92 (314)
-||+|.-|.-++...|.. +++.+ +--+|...+|=||+|-+-.... ..|.++-..|..+++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 489999997766544322 44444 4579999999999997643210 12555556677777777
Q ss_pred hCC------ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 93 LGL------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 93 l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
|.- .+++.+|-|+||++|..+-.+||+.|.|...-++|..
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 643 4799999999999999999999999988776555433
No 167
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.00057 Score=53.68 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=65.8
Q ss_pred ceEEEEcCCCC-ChhchH---------------HHHHHHhhCCcEEEEeCCC----CCCCCCCCCCCCCCCHHHHHH-HH
Q 021282 28 HVVVFLHGFPE-IWYSWR---------------HQMVGVATAGFRAIAPDCR----GYGLSDPPAEPEKTSFQDMVD-DL 86 (314)
Q Consensus 28 p~vlllHG~~~-~~~~~~---------------~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~a~-d~ 86 (314)
.-+||+||.+- -...|. +.+.+..+.||.||....- =+-.-+.|.. ...|.-+.+. --
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~k-yirt~veh~~yvw 180 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQK-YIRTPVEHAKYVW 180 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcch-hccchHHHHHHHH
Confidence 47999999873 233342 2233444679999988654 1111122211 1123333333 33
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcc--cceeeeEEecCCCC
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ--ERVSGVITLGVPIL 132 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lvl~~~~~~ 132 (314)
..++.-..-+.+.+|.||+||...+.+..++| ++|.++.+.+++..
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 45666667788999999999999999999998 57888888887643
No 168
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.65 E-value=0.0002 Score=64.50 Aligned_cols=95 Identities=14% Similarity=0.180 Sum_probs=58.6
Q ss_pred CCceEEEEcCCC----CChhc--hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------
Q 021282 26 DAHVVVFLHGFP----EIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-------- 91 (314)
Q Consensus 26 ~~p~vlllHG~~----~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~-------- 91 (314)
..|.++++||.+ .+..+ |.... .+..+--.|.++|++.-- ..-++..-++-+..|..
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~l-sl~gevvev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRL-SLKGEVVEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHH-hhhceeeeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhc
Confidence 357899999988 23333 33322 232333566677776321 11345555555555544
Q ss_pred HhCCceEEEEEeCchHHHHHHHHHhcc-cceeeeEEecC
Q 021282 92 HLGLAKVFLVAKDFGALTAYMFAIQHQ-ERVSGVITLGV 129 (314)
Q Consensus 92 ~l~~~~~~lvGhS~Gg~va~~~a~~~p-~~v~~lvl~~~ 129 (314)
++...+++|+|.|||+.|+..+....- .-|+++|+++-
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigy 284 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGY 284 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEEecc
Confidence 345668999999999988888877653 34888887763
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.58 E-value=0.00025 Score=54.36 Aligned_cols=52 Identities=19% Similarity=0.304 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHh----CCceEEEEEeCchHHHHHHHHHhccc----ceeeeEEecCC
Q 021282 79 FQDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE----RVSGVITLGVP 130 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lvl~~~~ 130 (314)
...+...+...++.. ...+++++|||+||.+|..++...+. .+..++..++|
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 344555555555554 56789999999999999999988765 56667767754
No 170
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.58 E-value=0.0048 Score=53.06 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=66.4
Q ss_pred eEEEEcCCCCChhc---hHHHHHHHhhCCcEEEEeCCCC--CCCCCC--------------CCCCCC-----------C-
Q 021282 29 VVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDCRG--YGLSDP--------------PAEPEK-----------T- 77 (314)
Q Consensus 29 ~vlllHG~~~~~~~---~~~~~~~l~~~~~~vi~~D~~G--~G~S~~--------------~~~~~~-----------~- 77 (314)
.||+|||++.+... -.++-..|.+.|+..+++.+|. -..+.. ...... -
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 89999999987632 2344456778899999999998 110000 000000 0
Q ss_pred ------CHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhccc-ceeeeEEecC
Q 021282 78 ------SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE-RVSGVITLGV 129 (314)
Q Consensus 78 ------~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~ 129 (314)
.+..-.+.+.++....+.++++||||+.|+..+..|.+..+. .+.++|+|++
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 111222333334444566679999999999999999998874 5899999985
No 171
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.56 E-value=0.0025 Score=55.59 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=43.9
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCC-CceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVP-NLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
++++|-++|.|..|.+..++....|.. .+| ...+..+|+++|..-. ..+.+.|..|+.
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d------~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYD------KLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHh------hCCCCeeEEeCCCCCcccch---HHHHHHHHHHHH
Confidence 578999999999999997777665542 234 4677889999998877 455566677764
No 172
>COG0627 Predicted esterase [General function prediction only]
Probab=97.55 E-value=0.00046 Score=59.05 Aligned_cols=105 Identities=17% Similarity=0.258 Sum_probs=64.2
Q ss_pred CCceEEEEcCCCCChhchH--HHHHHH-hhCCcEEEEeCCC--------------CCCCC---CCCCC--CC-CCCHHH-
Q 021282 26 DAHVVVFLHGFPEIWYSWR--HQMVGV-ATAGFRAIAPDCR--------------GYGLS---DPPAE--PE-KTSFQD- 81 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~--~~~~~l-~~~~~~vi~~D~~--------------G~G~S---~~~~~--~~-~~~~~~- 81 (314)
+-|+++++||..++..+|. .-++.. ...+.-++++|-. |-|.| ++... .. .|.++.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 4578889999988754432 122222 2346677776322 33332 22111 01 144444
Q ss_pred HHHHHHHHHHH-hCC----ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 82 MVDDLLAILDH-LGL----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 82 ~a~d~~~~~~~-l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.+++-..+++ ... ++-.++||||||.=|+.+|+++|++++++...++.
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 34455544443 331 26789999999999999999999999999877654
No 173
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.53 E-value=0.00012 Score=60.84 Aligned_cols=102 Identities=19% Similarity=0.188 Sum_probs=54.4
Q ss_pred CceEEEEcCCCCCh---hchHHHHHHHhh--CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceE
Q 021282 27 AHVVVFLHGFPEIW---YSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKV 98 (314)
Q Consensus 27 ~p~vlllHG~~~~~---~~~~~~~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~~~~~ 98 (314)
-.|||+.||++.+. ..+..+...+.+ .|-.|++++. |-|.++......-..+.+.++.+.+.+.. |. +-+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~G~ 82 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-NGF 82 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T-E
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-cce
Confidence 46999999999753 244433322211 2667777776 33321100000012456666666666654 33 469
Q ss_pred EEEEeCchHHHHHHHHHhccc-ceeeeEEecCC
Q 021282 99 FLVAKDFGALTAYMFAIQHQE-RVSGVITLGVP 130 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p~-~v~~lvl~~~~ 130 (314)
++||+|-||.++..++.+.|+ .|..+|.++++
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 999999999999999999875 69999999865
No 174
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.46 E-value=0.0003 Score=44.61 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=23.9
Q ss_pred cceeeeee-CCEEEEEEecc-CC------CCCceEEEEcCCCCChhchH
Q 021282 4 IEHKFIKV-QGLNLHIAEAG-AD------ADAHVVVFLHGFPEIWYSWR 44 (314)
Q Consensus 4 ~~~~~~~~-~g~~i~~~~~g-~~------~~~p~vlllHG~~~~~~~~~ 44 (314)
.|...+++ ||+-|...... +. +.+|||+|.||+.+++..|-
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 45666777 99999875433 21 24789999999999999983
No 175
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.41 E-value=0.0012 Score=58.52 Aligned_cols=108 Identities=17% Similarity=0.228 Sum_probs=78.9
Q ss_pred CCCceEEEEcCCCCChhchH----HHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhC
Q 021282 25 ADAHVVVFLHGFPEIWYSWR----HQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEK-----TSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~----~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~-----~~~~~~a~d~~~~~~~l~ 94 (314)
++||.-|+|=|=+.....|- .....++++ |-.|+.+.+|=||+|.+...... -|..+...|+.+||+++.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 45788888877544333341 111223333 77999999999999965433222 267788889999999985
Q ss_pred C-------ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCCCC
Q 021282 95 L-------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (314)
Q Consensus 95 ~-------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 132 (314)
. .|++.+|-|+-|.++..+-.++|+.+.+-|..++|..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 3 2799999999999999999999999999887665543
No 176
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.40 E-value=0.0018 Score=52.94 Aligned_cols=98 Identities=19% Similarity=0.187 Sum_probs=64.0
Q ss_pred ceEEEEcCCCCChhc--hHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C-ceEEEEE
Q 021282 28 HVVVFLHGFPEIWYS--WRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-L-AKVFLVA 102 (314)
Q Consensus 28 p~vlllHG~~~~~~~--~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~-~-~~~~lvG 102 (314)
.|+|++||++++..+ ...+.+.+.+. |..|+++|. |-| . .......+.++++.+.+.+.... + +-+++||
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~--~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I--KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c--chhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 589999999977666 44444444332 788888886 344 1 11112234555555544443221 1 3599999
Q ss_pred eCchHHHHHHHHHhccc-ceeeeEEecCC
Q 021282 103 KDFGALTAYMFAIQHQE-RVSGVITLGVP 130 (314)
Q Consensus 103 hS~Gg~va~~~a~~~p~-~v~~lvl~~~~ 130 (314)
.|-||.++..++..-|+ .|..+|.+++|
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999999998764 58888888754
No 177
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.37 E-value=0.00037 Score=49.43 Aligned_cols=60 Identities=17% Similarity=0.265 Sum_probs=49.1
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
..|+|++.++.|+..|.+.. ..+++.+++++++++++.||......-.-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a------~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGA------RAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHH------HHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 58999999999999976543 3456778999999999999999865456778889999864
No 178
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.33 E-value=0.00072 Score=50.85 Aligned_cols=39 Identities=13% Similarity=0.243 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 80 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
....+.+.++++...-.++.+.|||+||.+|..++....
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 345566666666667678999999999999999998753
No 179
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.27 E-value=0.0034 Score=56.47 Aligned_cols=126 Identities=13% Similarity=0.077 Sum_probs=77.1
Q ss_pred ceeeeeeC---CEEEEEEecc---CCCCCceEEEEcCCCCChhchHH---HHHH-------------H------hhCCcE
Q 021282 5 EHKFIKVQ---GLNLHIAEAG---ADADAHVVVFLHGFPEIWYSWRH---QMVG-------------V------ATAGFR 56 (314)
Q Consensus 5 ~~~~~~~~---g~~i~~~~~g---~~~~~p~vlllHG~~~~~~~~~~---~~~~-------------l------~~~~~~ 56 (314)
..+|++++ +..++|+-.. +..+.|.||.+.|.|+++..+.. ..+. + ..+..+
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 35788883 4677775422 22356999999999998875422 1111 1 012378
Q ss_pred EEEeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHHhc----------c
Q 021282 57 AIAPD-CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQH----------Q 118 (314)
Q Consensus 57 vi~~D-~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------p 118 (314)
++.+| ..|.|.|.........+-...|+++.+++... .-.+++|.|.|+||..+-.+|..- +
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 99999 77999996432211111123345666655542 345799999999998666665431 1
Q ss_pred cceeeeEEecCC
Q 021282 119 ERVSGVITLGVP 130 (314)
Q Consensus 119 ~~v~~lvl~~~~ 130 (314)
-.++++++.++.
T Consensus 198 inLkGi~iGNg~ 209 (433)
T PLN03016 198 INLQGYMLGNPV 209 (433)
T ss_pred ccceeeEecCCC
Confidence 257788876653
No 180
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.25 E-value=0.01 Score=51.76 Aligned_cols=119 Identities=14% Similarity=0.132 Sum_probs=72.9
Q ss_pred CCEEEEEEeccCC---CCCceEEEEcCCCCChhchHHHHH------HHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 021282 12 QGLNLHIAEAGAD---ADAHVVVFLHGFPEIWYSWRHQMV------GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (314)
Q Consensus 12 ~g~~i~~~~~g~~---~~~p~vlllHG~~~~~~~~~~~~~------~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (314)
|-..++....+++ ++.|.||++||.+-.......+++ .+.+ ...++++|..-.. |.......++-+.+.
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~-~~~~~~~yPtQL~ql 181 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS-SDEHGHKYPTQLRQL 181 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc-cccCCCcCchHHHHH
Confidence 3334555553321 235999999998744444333333 2334 4688888876553 000111123456666
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh--ccc---ceeeeEEecCCCC
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ--HQE---RVSGVITLGVPIL 132 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~--~p~---~v~~lvl~~~~~~ 132 (314)
+.-...+++..|.++++|+|-|-||.+++.+.+. .+. .-+++|+|++...
T Consensus 182 v~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 182 VATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred HHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 6667777777788999999999999999987753 211 1367788876443
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.24 E-value=8.7e-05 Score=58.15 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=65.4
Q ss_pred CceEEEEcCCCCChhchHH--HH-HHHhhCCcEEEEeCCCCCCCCCCC-------CCC-------------CCCCHHHH-
Q 021282 27 AHVVVFLHGFPEIWYSWRH--QM-VGVATAGFRAIAPDCRGYGLSDPP-------AEP-------------EKTSFQDM- 82 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~--~~-~~l~~~~~~vi~~D~~G~G~S~~~-------~~~-------------~~~~~~~~- 82 (314)
-|+|.+|-|+.++..+|-. -. ......|+-||+||-.--|.--.. ..+ ..|.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4789999999999887642 11 123356899999997655532110 000 01233222
Q ss_pred HHHHHHHHHH----hCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 83 VDDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 83 a~d~~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
.+++-+++.. +...++.+.||||||.=|+..+++.|++.+++-...+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 2233333331 1234688999999999999999999999988876654
No 182
>PLN02209 serine carboxypeptidase
Probab=97.22 E-value=0.0068 Score=54.63 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=78.2
Q ss_pred eeeeeeC---CEEEEEEecc---CCCCCceEEEEcCCCCChhchHHHHH---H-Hh------------------hCCcEE
Q 021282 6 HKFIKVQ---GLNLHIAEAG---ADADAHVVVFLHGFPEIWYSWRHQMV---G-VA------------------TAGFRA 57 (314)
Q Consensus 6 ~~~~~~~---g~~i~~~~~g---~~~~~p~vlllHG~~~~~~~~~~~~~---~-l~------------------~~~~~v 57 (314)
.+|++++ +..++|+-.. +..+.|.|+.+.|.|+++..+....+ . +. .+..++
T Consensus 41 sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 120 (437)
T PLN02209 41 TGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANI 120 (437)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcE
Confidence 4677773 4667775332 22346999999999998877643221 0 00 123689
Q ss_pred EEeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHHhc----------cc
Q 021282 58 IAPD-CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQH----------QE 119 (314)
Q Consensus 58 i~~D-~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------p~ 119 (314)
+.+| ..|.|.|.........+-++.|+|+.+++... .-.+++|.|.|+||.-+-.+|..- +=
T Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~i 200 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPI 200 (437)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCce
Confidence 9999 77999985432211123334567777766653 235799999999997666665432 12
Q ss_pred ceeeeEEecCC
Q 021282 120 RVSGVITLGVP 130 (314)
Q Consensus 120 ~v~~lvl~~~~ 130 (314)
.++++++.++.
T Consensus 201 nl~Gi~igng~ 211 (437)
T PLN02209 201 NLQGYVLGNPI 211 (437)
T ss_pred eeeeEEecCcc
Confidence 46788876653
No 183
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.22 E-value=0.0054 Score=50.83 Aligned_cols=64 Identities=11% Similarity=0.253 Sum_probs=50.7
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccc-cChHHHHHHHHHHH
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFL 310 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 310 (314)
...+|-++++++.|.+++.+.++++....+ +.--.++...++++.|..|+ ++|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~--~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEAR--RKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHH--HcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 457899999999999998877777654322 22223788889999998888 68999999999885
No 184
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0061 Score=55.45 Aligned_cols=114 Identities=17% Similarity=0.137 Sum_probs=77.8
Q ss_pred CCEEEEEEeccC--CC-CCceEEEEcCCC-CC-hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCC--CCCCCCCHHHHHH
Q 021282 12 QGLNLHIAEAGA--DA-DAHVVVFLHGFP-EI-WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVD 84 (314)
Q Consensus 12 ~g~~i~~~~~g~--~~-~~p~vlllHG~~-~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~a~ 84 (314)
||++|.|.+.++ .. .+|++|+-=|.. -+ .=.|.++....+++|...+.-..||=|.=.+. ...-.-.-+...+
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfd 482 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFD 482 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhH
Confidence 999999987642 12 367777666443 22 22355666667788989999999998853221 1000112334566
Q ss_pred HHHHHHHHh---CC---ceEEEEEeCchHHHHHHHHHhcccceeeeE
Q 021282 85 DLLAILDHL---GL---AKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (314)
Q Consensus 85 d~~~~~~~l---~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 125 (314)
|..++.+.| |+ +++.+-|-|-||.+.-....++||.+.++|
T Consensus 483 Df~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v 529 (648)
T COG1505 483 DFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAV 529 (648)
T ss_pred HHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCcee
Confidence 777777766 34 357899999999999999999999998887
No 185
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.14 E-value=0.013 Score=49.73 Aligned_cols=65 Identities=22% Similarity=0.438 Sum_probs=45.6
Q ss_pred ccc-ccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChH---HHHHHHHHHHhhc
Q 021282 245 AVK-VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPE---EVNQLILTFLNKH 313 (314)
Q Consensus 245 ~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 313 (314)
.+. +|+++++|.+|..+|.......... .+.. ..+...+++++|......+. +....+.+|+.++
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~---~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEA---ARER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhh---hccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 454 7999999999999987655544322 1111 45778888999998875444 6777788888653
No 186
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.12 E-value=0.0014 Score=59.91 Aligned_cols=88 Identities=18% Similarity=0.279 Sum_probs=54.3
Q ss_pred chHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh----CCceEEEEEeCchHHHHHHHHHh
Q 021282 42 SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 42 ~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~a~d~~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
.|..+++.|...||. --|+.|-.. |+.... ....-+++-..+..++|.. +-+|++||||||||.+++.+...
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPY-DWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAY-DWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeeccc-ccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 678899999988885 334433321 010000 0112244555555555543 45799999999999999998763
Q ss_pred c---------------ccceeeeEEecCCCC
Q 021282 117 H---------------QERVSGVITLGVPIL 132 (314)
Q Consensus 117 ~---------------p~~v~~lvl~~~~~~ 132 (314)
- ...|+++|.++++..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 2 134788888876543
No 187
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.01 E-value=0.0092 Score=53.29 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=72.8
Q ss_pred CCEEEEEEecc-CCCCCceEEEEcCCC---CChhc--hHHHHHHHhhCC-cEEEEeCCCC--CCC---CCCC---CCCCC
Q 021282 12 QGLNLHIAEAG-ADADAHVVVFLHGFP---EIWYS--WRHQMVGVATAG-FRAIAPDCRG--YGL---SDPP---AEPEK 76 (314)
Q Consensus 12 ~g~~i~~~~~g-~~~~~p~vlllHG~~---~~~~~--~~~~~~~l~~~~-~~vi~~D~~G--~G~---S~~~---~~~~~ 76 (314)
|...|+++... +..+.|++|+|||.+ ++... ++. ..|++.| +-||++++|= +|- |+-. ....+
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 66677777655 323459999999864 33333 443 4677777 8888887761 111 1111 00112
Q ss_pred CCHHHH---HHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhcc---cceeeeEEecCC
Q 021282 77 TSFQDM---VDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVP 130 (314)
Q Consensus 77 ~~~~~~---a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p---~~v~~lvl~~~~ 130 (314)
..+.++ .+.+.+-|++.|-+ +|.|+|+|-||+.++.+.+. | ..+.+.|+.++.
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~ 216 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGA 216 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCC
Confidence 234333 45566778888865 59999999999998887764 4 467777766543
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.97 E-value=0.027 Score=43.98 Aligned_cols=52 Identities=27% Similarity=0.330 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhCC-----ceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 79 FQDMVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
-+.-+.++.+|++.|.- .+..++|||+|+.++-..+...+..+..++++++|
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 45677888888888742 35889999999999999888778899999999875
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.96 E-value=0.005 Score=50.72 Aligned_cols=35 Identities=6% Similarity=0.095 Sum_probs=31.2
Q ss_pred CceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
-++-.++|||+||.+++.....+|+.+....++++
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SP 170 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISP 170 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecc
Confidence 34578999999999999999999999999998764
No 190
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.69 E-value=0.0053 Score=50.46 Aligned_cols=24 Identities=17% Similarity=0.265 Sum_probs=20.6
Q ss_pred CCceEEEEEeCchHHHHHHHHHhc
Q 021282 94 GLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 94 ~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
...++.+.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999999988864
No 191
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.62 E-value=0.0066 Score=49.51 Aligned_cols=47 Identities=23% Similarity=0.260 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhc----ccceeeeEEecCC
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH----QERVSGVITLGVP 130 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lvl~~~~ 130 (314)
++-+..+++..+. ++.+.|||.||.+|+..|+.. .+++.++...++|
T Consensus 72 ~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 72 LAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3344455555554 599999999999999999874 4578888888865
No 192
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.62 E-value=0.021 Score=50.09 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=30.3
Q ss_pred eEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 97 KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 97 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|++++|+|.||++|..+|.-.|..+.+++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999999998855443
No 193
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.58 E-value=0.01 Score=48.53 Aligned_cols=56 Identities=16% Similarity=0.322 Sum_probs=43.6
Q ss_pred EEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCC-CccccChHHHHHHHHHHHhh
Q 021282 250 ALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSH-FVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 250 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH-~~~~e~p~~~~~~i~~fl~~ 312 (314)
+.++..++|..+|...+.+ +.+..|++++..++ .|| ...+-+-++|...|.+-|.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~------lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS------LQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHH------HHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 5677899998887655444 34678999999998 799 55667788999999888753
No 194
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.58 E-value=0.0044 Score=54.86 Aligned_cols=87 Identities=17% Similarity=0.330 Sum_probs=57.1
Q ss_pred hchHHHHHHHhhCCcE------EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHH
Q 021282 41 YSWRHQMVGVATAGFR------AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFA 114 (314)
Q Consensus 41 ~~~~~~~~~l~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a 114 (314)
..|..+++.|..=||. -..||.|= |-...+...-.+..+..-|......-|-+|++||+|||||.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 3788888888765664 45677773 11111111223555555555555555779999999999999999999
Q ss_pred Hhccc--------ceeeeEEecCC
Q 021282 115 IQHQE--------RVSGVITLGVP 130 (314)
Q Consensus 115 ~~~p~--------~v~~lvl~~~~ 130 (314)
..++. .+++++-++++
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred hcccccchhHHHHHHHHHHccCch
Confidence 98876 35666666543
No 195
>PLN02162 triacylglycerol lipase
Probab=96.53 E-value=0.0071 Score=53.84 Aligned_cols=53 Identities=23% Similarity=0.352 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh---c-----ccceeeeEEecCCC
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPI 131 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~---~-----p~~v~~lvl~~~~~ 131 (314)
+..+-+.+.+++++..-.++++.|||+||.+|..+|+. + .+++.++...|+|-
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 44555666666766666689999999999999998652 1 12345666667653
No 196
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.46 E-value=0.01 Score=53.05 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=70.8
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHh-------------------hCCcEEEEeC-CCCCCCCCCCCCCCCCCHHHHHHH
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVA-------------------TAGFRAIAPD-CRGYGLSDPPAEPEKTSFQDMVDD 85 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~-------------------~~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~a~d 85 (314)
+.|.++.+.|.|+++..|..+.+ +. ...-.+|.+| .-|-|-|.........++....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 57899999999999999875532 11 0124799999 779999975333344567777777
Q ss_pred HHHHHHHh-------C--CceEEEEEeCchHHHHHHHHHhcccc---eeeeEEe
Q 021282 86 LLAILDHL-------G--LAKVFLVAKDFGALTAYMFAIQHQER---VSGVITL 127 (314)
Q Consensus 86 ~~~~~~~l-------~--~~~~~lvGhS~Gg~va~~~a~~~p~~---v~~lvl~ 127 (314)
+..+.+.. . ..+.+|+|-|+||.-+-.+|..--+. ..+++++
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nl 232 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNL 232 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEe
Confidence 77766653 2 34899999999998888888654442 4555544
No 197
>PLN00413 triacylglycerol lipase
Probab=96.39 E-value=0.011 Score=52.78 Aligned_cols=52 Identities=31% Similarity=0.487 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh---c-----ccceeeeEEecCCC
Q 021282 80 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPI 131 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~---~-----p~~v~~lvl~~~~~ 131 (314)
..+.+.+.++++...-.++++.|||+||.+|..+|+. + ..++.++...|+|-
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 3566677788887777789999999999999998852 1 23455666666653
No 198
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.34 E-value=0.047 Score=49.11 Aligned_cols=124 Identities=14% Similarity=0.096 Sum_probs=78.4
Q ss_pred ceeeeeeC---CEEEEEEecc--CC-CCCceEEEEcCCCCChhchHHHHHHHh------------------hCCcEEEEe
Q 021282 5 EHKFIKVQ---GLNLHIAEAG--AD-ADAHVVVFLHGFPEIWYSWRHQMVGVA------------------TAGFRAIAP 60 (314)
Q Consensus 5 ~~~~~~~~---g~~i~~~~~g--~~-~~~p~vlllHG~~~~~~~~~~~~~~l~------------------~~~~~vi~~ 60 (314)
..+|++++ +..++|+-.. ++ .+.|.||.|.|.|+++..- ..+..+. .+-.+++.+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 35788886 7889986433 22 3478999999999887554 2222221 122478888
Q ss_pred CCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHH----hc-----c-cce
Q 021282 61 DCR-GYGLSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAI----QH-----Q-ERV 121 (314)
Q Consensus 61 D~~-G~G~S~~~~~~-~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~----~~-----p-~~v 121 (314)
|.| |-|-|-..... ...+-+..|+|+.+|+... .-.+++|.|-|++|...-.+|. .. | -.+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 887 88887533221 1234556677777666542 3468999999999966655554 22 1 357
Q ss_pred eeeEEecC
Q 021282 122 SGVITLGV 129 (314)
Q Consensus 122 ~~lvl~~~ 129 (314)
+|+++-++
T Consensus 204 kG~~IGNg 211 (454)
T KOG1282|consen 204 KGYAIGNG 211 (454)
T ss_pred eEEEecCc
Confidence 78875544
No 199
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.31 E-value=0.035 Score=51.68 Aligned_cols=119 Identities=15% Similarity=0.139 Sum_probs=67.6
Q ss_pred CCEEEEEEeccCCC---CCceEEEEcCCC---CCh--hchHHHHHHHhhCCcEEEEeCCC----CCCCCCCCCCC-CCCC
Q 021282 12 QGLNLHIAEAGADA---DAHVVVFLHGFP---EIW--YSWRHQMVGVATAGFRAIAPDCR----GYGLSDPPAEP-EKTS 78 (314)
Q Consensus 12 ~g~~i~~~~~g~~~---~~p~vlllHG~~---~~~--~~~~~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~~-~~~~ 78 (314)
|=..|++....... .-|++|+|||.+ ++. ..+.. ...+..++.=||++..| |+-.+.....+ .++.
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~G 185 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYG 185 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchhhh
Confidence 55677776654322 249999999864 333 33442 23345668999999887 33323222111 3455
Q ss_pred HHHH---HHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhc--ccceeeeEEecCCC
Q 021282 79 FQDM---VDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH--QERVSGVITLGVPI 131 (314)
Q Consensus 79 ~~~~---a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~--p~~v~~lvl~~~~~ 131 (314)
+.++ .+.|.+-|+..|.+ +|.|.|+|-||..+..++..- ..++++.|+.++..
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 5444 34455566666754 599999999999888877763 25899999887643
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.09 E-value=0.031 Score=48.63 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=53.8
Q ss_pred HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEeCchHHHHHHHHHhccc
Q 021282 45 HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 45 ~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~ 119 (314)
.+...|...|+.||-+|-.=|-.|.+ |.++.++|+.++++.. +.+++.|+|.|+|+-|--....+-|.
T Consensus 278 ~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 278 EVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 45667888899999999887777643 6778999999999887 56789999999999876655554443
No 201
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.06 E-value=0.0091 Score=54.40 Aligned_cols=66 Identities=17% Similarity=0.307 Sum_probs=49.0
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccc------------------------cccCC-----CceEEEeCCCCCCcccc
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKA------------------------KDLVP-----NLEIIHLPEGSHFVQEQ 297 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~------------------------~~~~~-----~~~~~~i~~~gH~~~~e 297 (314)
.++||+..|+.|.+++....+.+.....+ .+... +.+++.+.+|||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 47999999999988876444333322110 01123 67888899999999999
Q ss_pred ChHHHHHHHHHHHhh
Q 021282 298 SPEEVNQLILTFLNK 312 (314)
Q Consensus 298 ~p~~~~~~i~~fl~~ 312 (314)
+|+...+.|..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999864
No 202
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.98 E-value=0.019 Score=49.65 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=31.0
Q ss_pred hCCceEEEEEeCchHHHHHHHHHhccc-----ceeeeEEecCCC
Q 021282 93 LGLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPI 131 (314)
Q Consensus 93 l~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lvl~~~~~ 131 (314)
.|..|++|||||+|+.+...+...-++ .|+.++++++|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 366689999999999999877765444 389999998764
No 203
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.93 E-value=0.012 Score=51.29 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=55.0
Q ss_pred CceEEEEcCCCC-ChhchHHHHHHHhhCCcEEEEeCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeC
Q 021282 27 AHVVVFLHGFPE-IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDP-PAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (314)
Q Consensus 27 ~p~vlllHG~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS 104 (314)
+.-|+++||+-+ +...|...+...... +.=..+..+|+=.... ...+..+==...++++.+.+....++++..||||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 457999999977 788888877765543 3222444444432211 1111111113566677777777778999999999
Q ss_pred chHHHHHHHHH
Q 021282 105 FGALTAYMFAI 115 (314)
Q Consensus 105 ~Gg~va~~~a~ 115 (314)
.||.++.....
T Consensus 159 LGGLvar~AIg 169 (405)
T KOG4372|consen 159 LGGLVARYAIG 169 (405)
T ss_pred cCCeeeeEEEE
Confidence 99988765433
No 204
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.93 E-value=0.12 Score=41.33 Aligned_cols=97 Identities=20% Similarity=0.266 Sum_probs=67.5
Q ss_pred CceEEEEcCCCCChhc---hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc----eEE
Q 021282 27 AHVVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA----KVF 99 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~---~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~----~~~ 99 (314)
..-|||+-|++...-. -.++...|.+.++.+|-+-++-+= . .....|+.+-++|+..++++++.. +++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~-G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----N-GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----c-ccccccccccHHHHHHHHHHhhccCcccceE
Confidence 4679999988754222 234556677779999999887331 1 112457888899999999988643 799
Q ss_pred EEEeCchHHHHHHHHHh--cccceeeeEEec
Q 021282 100 LVAKDFGALTAYMFAIQ--HQERVSGVITLG 128 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~--~p~~v~~lvl~~ 128 (314)
|+|||.|+--.+.|... -|..+++.|+..
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqA 141 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQA 141 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhC
Confidence 99999999988888732 244455555444
No 205
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.83 E-value=0.047 Score=53.82 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=68.3
Q ss_pred CCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEe
Q 021282 25 ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAK 103 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~-~~~~~lvGh 103 (314)
+..||+.|+|..-+.......++.+| ..|-||.-....- ..-|++..|.-.++-++++. ..++.++|.
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccC-CcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 35799999998888776666544332 4566775432221 23589999988888888875 458999999
Q ss_pred CchHHHHHHHHHhcc--cceeeeEEecCC
Q 021282 104 DFGALTAYMFAIQHQ--ERVSGVITLGVP 130 (314)
Q Consensus 104 S~Gg~va~~~a~~~p--~~v~~lvl~~~~ 130 (314)
|+|++++..+|..-. .....++++|+.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 999999999997543 345668888753
No 206
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.80 E-value=0.017 Score=50.40 Aligned_cols=111 Identities=15% Similarity=0.193 Sum_probs=82.7
Q ss_pred EEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC
Q 021282 16 LHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHLG 94 (314)
Q Consensus 16 i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~a~d~~~~~~~l~ 94 (314)
+...+.+. +.|.|+..-|.+.+..-...-.-.|++ -+-|.+.+|=+|.|.+.+.. ..-|+++-|.|..+++++|.
T Consensus 54 vtLlHk~~--drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K 129 (448)
T PF05576_consen 54 VTLLHKDF--DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFK 129 (448)
T ss_pred EEEEEcCC--CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHH
Confidence 33344443 368888888888765444322234554 58999999999999865433 34589999999999998884
Q ss_pred ---CceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 95 ---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 95 ---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
-++.+--|-|-||+.++.+=.-||+-|.+.|.--+|
T Consensus 130 ~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 130 PIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred hhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 357888899999999999999999999998865443
No 207
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.79 E-value=0.087 Score=43.09 Aligned_cols=89 Identities=19% Similarity=0.271 Sum_probs=55.3
Q ss_pred eEEEEcCC--CCC-hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH--------HHHHHhCCc-
Q 021282 29 VVVFLHGF--PEI-WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL--------AILDHLGLA- 96 (314)
Q Consensus 29 ~vlllHG~--~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~--------~~~~~l~~~- 96 (314)
.|-|+=|. +.. .-.|+.+++.|.++||.|||.=..- | ++=...|+++. ++.+.-+..
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t----------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~ 87 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T----------FDHQAIAREVWERFERCLRALQKRGGLDP 87 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C----------CcHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 55666664 232 3346778899999999999975431 1 11112222222 222222221
Q ss_pred ---eEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 97 ---KVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 97 ---~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
+++-||||+|+-+-+.+...++..-++-++++
T Consensus 88 ~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 88 AYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 57789999999999999988875557777765
No 208
>PLN02571 triacylglycerol lipase
Probab=95.78 E-value=0.016 Score=51.17 Aligned_cols=37 Identities=11% Similarity=0.274 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHh
Q 021282 80 QDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 116 (314)
+++..++.++++...-+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777766543 58999999999999998875
No 209
>PLN02454 triacylglycerol lipase
Probab=95.74 E-value=0.019 Score=50.72 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCce--EEEEEeCchHHHHHHHHHh
Q 021282 83 VDDLLAILDHLGLAK--VFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 83 a~d~~~~~~~l~~~~--~~lvGhS~Gg~va~~~a~~ 116 (314)
...|.++++...-++ +++.|||+||.+|+..|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334444555444444 8999999999999999864
No 210
>PLN02310 triacylglycerol lipase
Probab=95.49 E-value=0.043 Score=48.44 Aligned_cols=37 Identities=8% Similarity=0.242 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhC----CceEEEEEeCchHHHHHHHHHh
Q 021282 80 QDMVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
++..+++.++++.+. .-++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345566667776653 1368999999999999998854
No 211
>PLN02934 triacylglycerol lipase
Probab=95.48 E-value=0.049 Score=49.22 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHH
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
.....+.+.+++++....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456677777888777779999999999999999985
No 212
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.42 E-value=0.099 Score=45.32 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=47.1
Q ss_pred cccEEEEecCCCcccCCCCchhhhcccccc------------------ccCCC-ceEEEeCCCCCCccccChHHHHHHHH
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAK------------------DLVPN-LEIIHLPEGSHFVQEQSPEEVNQLIL 307 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 307 (314)
.++|||..|..|.+++....+.+.....+. +...+ .++++|-+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 479999999999888754443333222210 11233 78888999999997 59999999999
Q ss_pred HHHhh
Q 021282 308 TFLNK 312 (314)
Q Consensus 308 ~fl~~ 312 (314)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 213
>PLN02408 phospholipase A1
Probab=95.39 E-value=0.027 Score=49.02 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhc
Q 021282 82 MVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 82 ~a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 117 (314)
..++|.++++...-+ ++++.|||+||.+|...|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445666677766544 489999999999999988754
No 214
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.20 E-value=0.036 Score=44.52 Aligned_cols=78 Identities=21% Similarity=0.348 Sum_probs=50.5
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcE-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCc
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFR-AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~ 105 (314)
...|||..||+.+...+.++. + ..++. ++++|.|-.-. +. |+ -+.++++|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~-~~~~D~l~~yDYr~l~~----------d~-----~~------~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--L-PENYDVLICYDYRDLDF----------DF-----DL------SGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--C-CCCccEEEEecCccccc----------cc-----cc------ccCceEEEEEEeH
Confidence 468999999999988776542 1 23444 45677763311 10 11 2457899999999
Q ss_pred hHHHHHHHHHhcccceeeeEEecCC
Q 021282 106 GALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 106 Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
|=++|..+....| +.+-+.+++.
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT 89 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGT 89 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECC
Confidence 9999988766543 4454555543
No 215
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.08 E-value=0.089 Score=41.38 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh------cccceeeeEEecCCCC
Q 021282 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ------HQERVSGVITLGVPIL 132 (314)
Q Consensus 82 ~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lvl~~~~~~ 132 (314)
+.+.+.+....=.-.+++|+|+|.|+.|+..++.. ..++|.++++++-|..
T Consensus 67 ~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 67 LVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33333333333345689999999999999999876 4578999999986533
No 216
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.00 E-value=2.3 Score=39.89 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=69.7
Q ss_pred CCceEEEEcCCCCCh--hchHHHHHHHhhCCcEEEEeCCCCCCCCCCC--C----CCCCCCHHHHHHHHHHHHHHhC--C
Q 021282 26 DAHVVVFLHGFPEIW--YSWRHQMVGVATAGFRAIAPDCRGYGLSDPP--A----EPEKTSFQDMVDDLLAILDHLG--L 95 (314)
Q Consensus 26 ~~p~vlllHG~~~~~--~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~--~----~~~~~~~~~~a~d~~~~~~~l~--~ 95 (314)
.+|.+|..=|.-+.+ -.|......|+++||-.-.---||=|.=... . .....|+.++.+....++++=- -
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 367777777765432 2344444567788876666667777654322 0 0113477777777666665432 3
Q ss_pred ceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 96 AKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
+.+.++|-|-||++....+...|++++++|+-
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 46899999999999999999999999999964
No 217
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.86 E-value=0.02 Score=51.59 Aligned_cols=65 Identities=26% Similarity=0.417 Sum_probs=43.6
Q ss_pred cccEEEEecCCCcccCCCCchhhhcccc--------------------ccccCCCceEEEeCCCCCCccccChHHHHHHH
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGK--------------------AKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLI 306 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i 306 (314)
.++|||..|..|.+++....+....... ..+...+.++++|.+|||+++.++|+...+.|
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999887433322222111 01123567789999999999999999999999
Q ss_pred HHHHh
Q 021282 307 LTFLN 311 (314)
Q Consensus 307 ~~fl~ 311 (314)
..||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
No 218
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.79 E-value=0.072 Score=46.17 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=48.8
Q ss_pred cEEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHHhc---------
Q 021282 55 FRAIAPDCR-GYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQH--------- 117 (314)
Q Consensus 55 ~~vi~~D~~-G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~--------- 117 (314)
.+|+.+|.| |.|-|.........+=...|+|+..++... .-.+++|.|-|+||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 478999999 999995432211112223446776666542 346799999999998776666532
Q ss_pred -ccceeeeEEecCC
Q 021282 118 -QERVSGVITLGVP 130 (314)
Q Consensus 118 -p~~v~~lvl~~~~ 130 (314)
+=.++|+++-++.
T Consensus 82 ~~inLkGi~IGNg~ 95 (319)
T PLN02213 82 PPINLQGYMLGNPV 95 (319)
T ss_pred CceeeeEEEeCCCC
Confidence 1257788866543
No 219
>PLN02324 triacylglycerol lipase
Probab=94.64 E-value=0.057 Score=47.73 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHh
Q 021282 81 DMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 116 (314)
+..++|.++++...-+ ++++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455566777766543 58899999999999999864
No 220
>PLN02802 triacylglycerol lipase
Probab=94.52 E-value=0.064 Score=48.49 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhc
Q 021282 81 DMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 117 (314)
+..+++.++++...-+ ++++.|||+||.+|...|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445566677665432 588999999999999988754
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.52 E-value=0.07 Score=48.37 Aligned_cols=36 Identities=8% Similarity=0.277 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhC----CceEEEEEeCchHHHHHHHHHh
Q 021282 81 DMVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 81 ~~a~d~~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
+..++|.++++.+. -.++.+.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34566777777663 1258999999999999998854
No 222
>PLN02753 triacylglycerol lipase
Probab=94.37 E-value=0.071 Score=48.37 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCC-----ceEEEEEeCchHHHHHHHHHh
Q 021282 81 DMVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~ 116 (314)
+....|.++++.... -++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344556666666542 379999999999999999863
No 223
>PLN02719 triacylglycerol lipase
Probab=94.00 E-value=0.094 Score=47.47 Aligned_cols=35 Identities=11% Similarity=0.282 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCC-----ceEEEEEeCchHHHHHHHHHh
Q 021282 82 MVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 82 ~a~d~~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~ 116 (314)
...+|.++++...- -++.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555566665532 268999999999999998864
No 224
>PLN02209 serine carboxypeptidase
Probab=93.80 E-value=0.14 Score=46.29 Aligned_cols=65 Identities=20% Similarity=0.360 Sum_probs=48.3
Q ss_pred cccEEEEecCCCcccCCCCchhhhcccccc------------------ccCCC-ceEEEeCCCCCCccccChHHHHHHHH
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAK------------------DLVPN-LEIIHLPEGSHFVQEQSPEEVNQLIL 307 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 307 (314)
.+++|+..|+.|.+++....+.+.....+. +...+ .+++++-+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999988865444443322211 12344 78888999999996 59999999999
Q ss_pred HHHhh
Q 021282 308 TFLNK 312 (314)
Q Consensus 308 ~fl~~ 312 (314)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 225
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.78 E-value=0.15 Score=46.10 Aligned_cols=65 Identities=18% Similarity=0.320 Sum_probs=48.0
Q ss_pred cccEEEEecCCCcccCCCCchhhhcccccc------------------ccCC-CceEEEeCCCCCCccccChHHHHHHHH
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAK------------------DLVP-NLEIIHLPEGSHFVQEQSPEEVNQLIL 307 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~ 307 (314)
.++||+..|+.|.+++....+.+.....+. +... +.+++++-+|||+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 479999999999988865544443322211 1223 378889999999997 58999999999
Q ss_pred HHHhh
Q 021282 308 TFLNK 312 (314)
Q Consensus 308 ~fl~~ 312 (314)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
No 226
>PLN02761 lipase class 3 family protein
Probab=93.69 E-value=0.12 Score=47.03 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhC------CceEEEEEeCchHHHHHHHHHh
Q 021282 81 DMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 81 ~~a~d~~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
++...|.++++..+ .-++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44556666666652 1269999999999999998853
No 227
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.52 E-value=0.19 Score=40.18 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=40.8
Q ss_pred CcEEEEeCCCCCCCCCCC----CCC---CCCCHHHHHHHHHHHHHHhCC-ceEEEEEeCchHHHHHHHHHhc
Q 021282 54 GFRAIAPDCRGYGLSDPP----AEP---EKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 54 ~~~vi~~D~~G~G~S~~~----~~~---~~~~~~~~a~d~~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
-.+|++|=.|=....... ... ....+.+..+....++++.+. .+++|+|||-|+.+..++...+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 368888876644332221 000 112344555555667777754 4899999999999999998875
No 228
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.33 E-value=0.18 Score=45.42 Aligned_cols=65 Identities=25% Similarity=0.379 Sum_probs=47.6
Q ss_pred ccEEEEecCCCcccCCCCchhhhcccc----------cc---------ccCCCceEEEeCCCCCCccccChHHHHHHHHH
Q 021282 248 VPALLIMGDKDYFLKFPGIEDYIRSGK----------AK---------DLVPNLEIIHLPEGSHFVQEQSPEEVNQLILT 308 (314)
Q Consensus 248 ~P~lii~G~~D~~~~~~~~~~~~~~~~----------~~---------~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 308 (314)
.+++|..|+.|.++|.-..+...+... .. +...+..+.++.||||+++.++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 799999999999998644443211110 11 11234566889999999999999999999999
Q ss_pred HHhh
Q 021282 309 FLNK 312 (314)
Q Consensus 309 fl~~ 312 (314)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9965
No 229
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=92.82 E-value=2.4 Score=29.72 Aligned_cols=84 Identities=17% Similarity=0.056 Sum_probs=55.3
Q ss_pred chHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchH--HHHHHHHHhccc
Q 021282 42 SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA--LTAYMFAIQHQE 119 (314)
Q Consensus 42 ~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg--~va~~~a~~~p~ 119 (314)
.|..+...+...+|..-.+.++.+|.+-..--... .-+.=..-+.++++.+...+++|||-|--. -+-..+|.++|+
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~-~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSG-AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCC-chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 44444444445568888888888876532110001 112334567788888988899999988665 444567889999
Q ss_pred ceeeeEE
Q 021282 120 RVSGVIT 126 (314)
Q Consensus 120 ~v~~lvl 126 (314)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9998864
No 230
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.77 E-value=0.53 Score=39.93 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=77.1
Q ss_pred eeeee-CCEEEEEEe----ccCCCCCceEEEEcCCCCChhc----hHHHHHH----------HhhCCcEEEEeCCC-CCC
Q 021282 7 KFIKV-QGLNLHIAE----AGADADAHVVVFLHGFPEIWYS----WRHQMVG----------VATAGFRAIAPDCR-GYG 66 (314)
Q Consensus 7 ~~~~~-~g~~i~~~~----~g~~~~~p~vlllHG~~~~~~~----~~~~~~~----------l~~~~~~vi~~D~~-G~G 66 (314)
.|+++ .+..+.++. .......|-.+.+-|.|+.+.. |..+-+. .+. .-.++.+|.| |-|
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~adllfvDnPVGaG 84 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-DADLLFVDNPVGAG 84 (414)
T ss_pred cceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-hccEEEecCCCcCc
Confidence 35666 555555432 2221235778888888765432 4433220 111 2568888876 888
Q ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEeCchHHHHHHHHHhccc---------ceeeeEEecC
Q 021282 67 LSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQHQE---------RVSGVITLGV 129 (314)
Q Consensus 67 ~S~~~~~~-~~~~~~~~a~d~~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~---------~v~~lvl~~~ 129 (314)
.|-..... ...+....|.|+.++++.+ .-.|++|+.-|+||-.|..++...-+ .+.+++|-++
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 88654322 2336788999999999976 34589999999999999887764322 3456666554
Q ss_pred C
Q 021282 130 P 130 (314)
Q Consensus 130 ~ 130 (314)
.
T Consensus 165 W 165 (414)
T KOG1283|consen 165 W 165 (414)
T ss_pred c
Confidence 3
No 231
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.57 E-value=0.22 Score=43.41 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHh
Q 021282 80 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
.++.+++.++++...--++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5788888899998886689999999999999988864
No 232
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=92.37 E-value=0.22 Score=41.89 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=63.3
Q ss_pred EEEEEeccCC--CCCceEEEEcCC--CCChhchHHHHHHHhhCC----cEEEEeCCCCCCCCCCCCCC---CCCCHHHHH
Q 021282 15 NLHIAEAGAD--ADAHVVVFLHGF--PEIWYSWRHQMVGVATAG----FRAIAPDCRGYGLSDPPAEP---EKTSFQDMV 83 (314)
Q Consensus 15 ~i~~~~~g~~--~~~p~vlllHG~--~~~~~~~~~~~~~l~~~~----~~vi~~D~~G~G~S~~~~~~---~~~~~~~~a 83 (314)
.+.|.-.|-. ..-|.+++.||- ..+...|. ++..|...+ --+|.+|.- ......+. ..-....++
T Consensus 84 ~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~ 159 (299)
T COG2382 84 RVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLA 159 (299)
T ss_pred EEEEeCCCCCccccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHH
Confidence 3444445521 235889999984 34444454 344454433 344444432 21111000 011345556
Q ss_pred HHHHHHHHHh-C----CceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 84 DDLLAILDHL-G----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 84 ~d~~~~~~~l-~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
+++.=+++.- . -+.-.|.|-|+||.+++..+.+||+++-.++.-+
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~S 209 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQS 209 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccC
Confidence 6666555542 1 1235689999999999999999999998888654
No 233
>PLN02847 triacylglycerol lipase
Probab=92.30 E-value=0.28 Score=45.35 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=18.5
Q ss_pred ceEEEEEeCchHHHHHHHHHh
Q 021282 96 AKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~~a~~ 116 (314)
=++.++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 378999999999999998865
No 234
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=92.26 E-value=1.3 Score=41.51 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=65.4
Q ss_pred CCEEEEEEeccCCCC--CceEEEEcCCC---CChhchHHHHH--HHhhCCcEEEEeCCC----CCCCCCCCCCCCCCCHH
Q 021282 12 QGLNLHIAEAGADAD--AHVVVFLHGFP---EIWYSWRHQMV--GVATAGFRAIAPDCR----GYGLSDPPAEPEKTSFQ 80 (314)
Q Consensus 12 ~g~~i~~~~~g~~~~--~p~vlllHG~~---~~~~~~~~~~~--~l~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~ 80 (314)
|-..+++...-.... -|++|++||.+ ++...+..... .+..++.=||.+..| |+..+.....+.++.+.
T Consensus 95 DCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 95 DCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF 174 (545)
T ss_pred CCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH
Confidence 555666655443222 58999999875 33322321111 222223455555555 33333211123456666
Q ss_pred HHHHHHH---HHHHHhC--CceEEEEEeCchHHHHHHHHHhc--ccceeeeEEecCC
Q 021282 81 DMVDDLL---AILDHLG--LAKVFLVAKDFGALTAYMFAIQH--QERVSGVITLGVP 130 (314)
Q Consensus 81 ~~a~d~~---~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lvl~~~~ 130 (314)
++...+. +-|...| -+++.|+|||-||..+..++..- ..++.+.|..++.
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 5554444 3344444 35799999999999998877642 2456666655543
No 235
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=90.25 E-value=0.26 Score=45.60 Aligned_cols=102 Identities=16% Similarity=0.149 Sum_probs=68.5
Q ss_pred CCceEEEEcCCCC-Ch-hchHHHHHHHhhCCcEEEEeCCCCCCCCC--CCCCCC----CCCHHHHHHHHHHHHHHh--CC
Q 021282 26 DAHVVVFLHGFPE-IW-YSWRHQMVGVATAGFRAIAPDCRGYGLSD--PPAEPE----KTSFQDMVDDLLAILDHL--GL 95 (314)
Q Consensus 26 ~~p~vlllHG~~~-~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~--~~~~~~----~~~~~~~a~d~~~~~~~l--~~ 95 (314)
..|.+|..+|.-+ +. -.|..--.-|.+.|.-...-|.||=|.=. |...+. ..+++++...+.-+++.- .-
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 3577777776543 22 23443333456778888888999977532 222221 246777666666666532 23
Q ss_pred ceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 96 AKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
++..+.|.|-||.++..++-.+|+++.++|+-
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 46889999999999999999999999988853
No 236
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.01 E-value=0.32 Score=44.65 Aligned_cols=62 Identities=18% Similarity=0.316 Sum_probs=34.4
Q ss_pred CcEEEEeCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh---CC---ceEEEEEeCchHHHHHHHHHh
Q 021282 54 GFRAIAPDCRGYGLSDPPAE-PEKTSFQDMVDDLLAILDHL---GL---AKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 54 ~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~a~d~~~~~~~l---~~---~~~~lvGhS~Gg~va~~~a~~ 116 (314)
+.|+|..+.+- -.+++... +.......++.-..++++.| ++ .++..|||||||.++-.+...
T Consensus 478 ~~Rii~l~Y~T-sit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 478 KSRIIGLEYTT-SITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred cceEEEeeccc-chhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 46777776653 12222110 01112334444444555554 33 469999999999888776654
No 237
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.01 E-value=1.2 Score=34.22 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred eEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 97 KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 97 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
...+-|-||||.-|..+..++|+.+.++|.+++.
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 4556799999999999999999999999987643
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=87.69 E-value=6.2 Score=32.28 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=43.0
Q ss_pred CcEEEEeCCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHH-h-CCceEEEEEeCchHHHHHHHHHhccc------ceee
Q 021282 54 GFRAIAPDCRGY-GL-SDPPAEPEKTSFQDMVDDLLAILDH-L-GLAKVFLVAKDFGALTAYMFAIQHQE------RVSG 123 (314)
Q Consensus 54 ~~~vi~~D~~G~-G~-S~~~~~~~~~~~~~~a~d~~~~~~~-l-~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~ 123 (314)
|+++..++.|.- +- +.........|+.+=++.+.+.++. . .-++++++|+|.|+.|+...+.+.-. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 466667777761 10 0000001122444444555554444 2 33689999999999999987765421 2345
Q ss_pred eEEecCC
Q 021282 124 VITLGVP 130 (314)
Q Consensus 124 lvl~~~~ 130 (314)
+|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 7777644
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=84.88 E-value=1.6 Score=36.49 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.7
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
..+.+...-.++-|-|||.||.+|..+..++-
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444445567889999999999999998873
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=84.88 E-value=1.6 Score=36.49 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.7
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
..+.+...-.++-|-|||.||.+|..+..++-
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444445567889999999999999998873
No 241
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.86 E-value=2 Score=39.42 Aligned_cols=65 Identities=15% Similarity=0.170 Sum_probs=47.7
Q ss_pred ccEEEEecCCCcccCCCCchhhhccccccc------cCCCceEEEeCCCCCCcccc--ChHHHHHHHHHHHhh
Q 021282 248 VPALLIMGDKDYFLKFPGIEDYIRSGKAKD------LVPNLEIIHLPEGSHFVQEQ--SPEEVNQLILTFLNK 312 (314)
Q Consensus 248 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 312 (314)
-.+++.+|..|.++++.....|+++....- .-.-.++..+|+.+|..--. .|-.....|.+|+++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 578999999999999877777775432111 11237999999999976654 455677788899875
No 242
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.15 E-value=3.3 Score=37.67 Aligned_cols=41 Identities=24% Similarity=0.354 Sum_probs=32.2
Q ss_pred hCCceEEEEEeCchHHHHHHHHHh-----cccceeeeEEecCCCCC
Q 021282 93 LGLAKVFLVAKDFGALTAYMFAIQ-----HQERVSGVITLGVPILP 133 (314)
Q Consensus 93 l~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~~lvl~~~~~~~ 133 (314)
+|..|+.|||.|.|+.+-..+... .=+.|..++++|+|...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 477899999999999998866652 23578899999977543
No 243
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=82.88 E-value=8.6 Score=30.87 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=47.7
Q ss_pred CCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCc----hHHHHHHHHHhcc-cceeeeEE
Q 021282 53 AGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF----GALTAYMFAIQHQ-ERVSGVIT 126 (314)
Q Consensus 53 ~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~----Gg~va~~~a~~~p-~~v~~lvl 126 (314)
.|. +|+..|.++.. .|+.+.+++-+.+++++.+ -.++|+|+|. |..++-++|++-- ..+..++-
T Consensus 75 ~G~d~V~~~~~~~~~---------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~ 144 (202)
T cd01714 75 MGADRAILVSDRAFA---------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSK 144 (202)
T ss_pred cCCCEEEEEeccccc---------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEE
Confidence 344 67777765432 4678899999999999888 4788999998 8899999998752 34444443
Q ss_pred e
Q 021282 127 L 127 (314)
Q Consensus 127 ~ 127 (314)
+
T Consensus 145 l 145 (202)
T cd01714 145 I 145 (202)
T ss_pred E
Confidence 3
No 244
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.64 E-value=3.6 Score=31.38 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=51.7
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchH
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg 107 (314)
-||..-||+..+.....++ +.+++ -+++||.+..-. .+++.++ +.+.||++|||=
T Consensus 13 LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~l--------dfDfsAy-------------~hirlvAwSMGV 68 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNL--------DFDFSAY-------------RHIRLVAWSMGV 68 (214)
T ss_pred EEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCc--------ccchhhh-------------hhhhhhhhhHHH
Confidence 6788889999888777653 23445 467888876542 1232222 345789999999
Q ss_pred HHHHHHHHhcccceeeeEEecCC
Q 021282 108 LTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 108 ~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+||-++..-. ++++-+.+++.
T Consensus 69 wvAeR~lqg~--~lksatAiNGT 89 (214)
T COG2830 69 WVAERVLQGI--RLKSATAINGT 89 (214)
T ss_pred HHHHHHHhhc--cccceeeecCC
Confidence 9999988776 46666666543
No 245
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=81.25 E-value=9.9 Score=33.29 Aligned_cols=58 Identities=19% Similarity=0.346 Sum_probs=39.6
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCCC-ceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPN-LEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
++.+|-.|+.|..|.+.+++...-|+ ...|+ ..+..+|+..|..-- ..+..-|..|++
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYy------d~LPG~kaLrmvPN~~H~~~n---~~i~esl~~fln 385 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYY------DDLPGEKALRMVPNDPHNLIN---QFIKESLEPFLN 385 (507)
T ss_pred hccccceeecccCCcccCCCccceee------ccCCCceeeeeCCCCcchhhH---HHHHHHHHHHHH
Confidence 57889999999999888776655443 34576 556789999997543 334444455543
No 246
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=79.94 E-value=2.3 Score=36.63 Aligned_cols=32 Identities=16% Similarity=0.368 Sum_probs=26.2
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
+.+.+++.|+..=.++|.|+|+.++..||+.+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 45556667887777889999999999999874
No 247
>PRK10279 hypothetical protein; Provisional
Probab=79.70 E-value=2.3 Score=36.49 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=27.5
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhccc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 119 (314)
+.+.+++.|+..-.++|.|+|+.++..||+...+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 4455566899888899999999999999987643
No 248
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=78.26 E-value=1.8 Score=37.50 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.5
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHH
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
+.++++..|+++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 446778889999999999999988876554
No 249
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=77.66 E-value=2.8 Score=36.07 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=27.9
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.+.+++.|+..-.+.|.|+|+.++..+|....
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 556667788988899999999999999998643
No 250
>PRK12467 peptide synthase; Provisional
Probab=77.61 E-value=11 Score=44.45 Aligned_cols=96 Identities=14% Similarity=0.011 Sum_probs=67.4
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEeCch
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~-~~~~~lvGhS~G 106 (314)
+.|++.|...++...+.++...+. .+..++.+..++.-.-.+ ...+++.++....+.+.... ..++.+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 569999988887767776655553 357888888776542222 23467888888887777654 457999999999
Q ss_pred HHHHHHHHHhc---ccceeeeEEec
Q 021282 107 ALTAYMFAIQH---QERVSGVITLG 128 (314)
Q Consensus 107 g~va~~~a~~~---p~~v~~lvl~~ 128 (314)
|.++..++..- -+.+.-+.+++
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999888643 34555555554
No 251
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=76.77 E-value=3 Score=35.59 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=24.7
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHH
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
+.++++.+|+++-.++|||+|-+.|..++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 345667889999999999999999887664
No 252
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=76.32 E-value=33 Score=29.18 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=72.1
Q ss_pred ceEEEEcCCCCChhc-hHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCch
Q 021282 28 HVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (314)
Q Consensus 28 p~vlllHG~~~~~~~-~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~G 106 (314)
|.||++--..++... .+..++.|+. ...|+.-|+---- ..|.....++++++++-++++++.+|-+ .|+++-.-=
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr--~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDAR--MVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccc--eeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 567777777776444 4556677776 4789998886443 2233345689999999999999999964 777776654
Q ss_pred H-----HHHHHHHHhcccceeeeEEecCCCCC
Q 021282 107 A-----LTAYMFAIQHQERVSGVITLGVPILP 133 (314)
Q Consensus 107 g-----~va~~~a~~~p~~v~~lvl~~~~~~~ 133 (314)
+ .+++.-+...|..-.+++++|+|...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 4 45555555668788899999876553
No 253
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=76.31 E-value=3.1 Score=32.32 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=25.7
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.+.+++.++..-.++|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334445568877788999999999999998754
No 254
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=76.24 E-value=3.5 Score=34.74 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=25.7
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
+.+.+++.|+.-=.++|.|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555777887667889999999999999864
No 255
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.79 E-value=4.6 Score=37.17 Aligned_cols=78 Identities=15% Similarity=0.182 Sum_probs=53.2
Q ss_pred hhCCcEEEEeCCCCCCCCCC--CCCC--C--------CCCHHHHHHHHHHHHHHh-C--CceEEEEEeCchHHHHHHHHH
Q 021282 51 ATAGFRAIAPDCRGYGLSDP--PAEP--E--------KTSFQDMVDDLLAILDHL-G--LAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 51 ~~~~~~vi~~D~~G~G~S~~--~~~~--~--------~~~~~~~a~d~~~~~~~l-~--~~~~~lvGhS~Gg~va~~~a~ 115 (314)
+..||-+++=|- ||..+.. .... . ..+++.++.--.++++.. + .+.-...|.|-||.-++..|.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 356999999885 5554432 1110 0 113445555555566654 3 345779999999999999999
Q ss_pred hcccceeeeEEecC
Q 021282 116 QHQERVSGVITLGV 129 (314)
Q Consensus 116 ~~p~~v~~lvl~~~ 129 (314)
+||+.+.+|+.-.+
T Consensus 135 ryP~dfDGIlAgaP 148 (474)
T PF07519_consen 135 RYPEDFDGILAGAP 148 (474)
T ss_pred hChhhcCeEEeCCc
Confidence 99999999996544
No 256
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=74.90 E-value=4.4 Score=33.03 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=24.2
Q ss_pred HHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.+++.+++.-.++|.|.|+.+|..+|...+
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3344457777789999999999999997653
No 257
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=74.62 E-value=3.7 Score=35.05 Aligned_cols=30 Identities=17% Similarity=-0.035 Sum_probs=24.7
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHH
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
+.++++..|+++..++|||+|=+.|..++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445667779999999999999998887764
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=73.41 E-value=4.6 Score=31.97 Aligned_cols=31 Identities=29% Similarity=0.401 Sum_probs=24.2
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
.+.+++.++..=.++|.|.||.+|..+++.+
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344556777777889999999999999864
No 259
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=72.13 E-value=1.5 Score=35.20 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=31.5
Q ss_pred ccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCcc
Q 021282 248 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQ 295 (314)
Q Consensus 248 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 295 (314)
-|++++.|++|.+.+ ....+. .++++.--.++++++++.+|...
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~--~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFA--EKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHH--HHHHHTT-EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchH--HHHHHH--HHHHHCCCCEEEEEECCCeEEee
Confidence 489999999998763 334443 34555555689999999999654
No 260
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=71.78 E-value=4.5 Score=34.37 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=23.9
Q ss_pred HHHHHHhC-CceEEEEEeCchHHHHHHHHHh
Q 021282 87 LAILDHLG-LAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 87 ~~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
.+.++..| +++..++|||+|=+.|..++..
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 34556667 9999999999999988887754
No 261
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=71.61 E-value=30 Score=29.31 Aligned_cols=63 Identities=19% Similarity=0.130 Sum_probs=38.2
Q ss_pred cEEEEeCCCCCCCC--------CCC-----CCCCCCCHHHHHHHHHHH-HHHh-CCceEEEEEeCchHHHHHHHHHhc
Q 021282 55 FRAIAPDCRGYGLS--------DPP-----AEPEKTSFQDMVDDLLAI-LDHL-GLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 55 ~~vi~~D~~G~G~S--------~~~-----~~~~~~~~~~~a~d~~~~-~~~l-~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
-+.+++-.+|-|.. ... .......+.+-+.+...+ ++.. ..+++.++|.|.|+..|..+|..-
T Consensus 36 ~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 36 ERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred CceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 36677888999871 111 111123444444433333 3444 345789999999999999999653
No 262
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=70.08 E-value=5.1 Score=31.71 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=43.3
Q ss_pred cc-cccEEEEecCCCcccCCCCchhhhccccccccCCC--ceEEEeCCCCCCccccCh---HHHHHHHHHHHhhc
Q 021282 245 AV-KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPN--LEIIHLPEGSHFVQEQSP---EEVNQLILTFLNKH 313 (314)
Q Consensus 245 ~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 313 (314)
+| ++++|-|-|+.|.+....+... ...+-..+|. .+.++.+++||+--+.-+ +++...|.+|+.++
T Consensus 131 aI~~taLlTVEGe~DDIsg~GQT~A---A~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 131 AIRRTALLTVEGERDDISGPGQTHA---AHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred HcccceeEEeecCcccCCcchHHHH---HHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 45 5677889999999876543221 1122222332 355678899998777543 68889999998764
No 263
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=69.51 E-value=10 Score=34.63 Aligned_cols=65 Identities=20% Similarity=0.146 Sum_probs=39.8
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHh
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
+.+++...|-.|..++......-.+........++..+..+=++|||++.++|+...+.+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHh
Confidence 45677777777877765333221111111112233333333459999999999999999998874
No 264
>PRK02399 hypothetical protein; Provisional
Probab=69.30 E-value=79 Score=28.37 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=62.8
Q ss_pred EEEcCCCCCh-hchHHHHHHHhhCCcEEEEeCCCCCCCCCCCC-------------------C--CCCCCHHHHHHHHHH
Q 021282 31 VFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPA-------------------E--PEKTSFQDMVDDLLA 88 (314)
Q Consensus 31 lllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~-------------------~--~~~~~~~~~a~d~~~ 88 (314)
|++=|-..+. .+...+-..+.+.|.+|+.+|.-..|....+. . .+...++.+++-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 3444544443 34554555565668999999985555221110 0 011234566666666
Q ss_pred HHHHh----CCceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 89 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 89 ~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
+++.| .++-++-+|-|+|..++...+..-|=-+-++++.
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 77654 3666888999999999999999999888888864
No 265
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.10 E-value=66 Score=28.84 Aligned_cols=88 Identities=10% Similarity=0.024 Sum_probs=62.3
Q ss_pred hhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC---------------------CCCCCHHHHHHHHHHHHHHhC----
Q 021282 40 WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------------------PEKTSFQDMVDDLLAILDHLG---- 94 (314)
Q Consensus 40 ~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------------------~~~~~~~~~a~d~~~~~~~l~---- 94 (314)
...+.++-..+.+.|.+++.+|.-=.|.+..+.+ .....++.+++-+..++..|-
T Consensus 14 ~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~ 93 (403)
T PF06792_consen 14 GEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGK 93 (403)
T ss_pred HHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3456666666777899999999876665543310 011235556666777777663
Q ss_pred CceEEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
++-++-+|-|.|..++...+..-|=-+-++++.
T Consensus 94 i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 94 IDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred ccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 556888899999999999999999888888854
No 266
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=67.55 E-value=42 Score=23.94 Aligned_cols=73 Identities=15% Similarity=0.090 Sum_probs=45.8
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhC-CcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEeCch
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFG 106 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~-~~~~lvGhS~G 106 (314)
.||.-|| .-.......+..+... .-++.++++.- ..+++++.+.+.+.++.+.- +.+.++--=+|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~-----------~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP-----------DESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT-----------TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC-----------CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4788999 3333445566666665 34777776541 23788999999999999874 44555544444
Q ss_pred HHHHHHHH
Q 021282 107 ALTAYMFA 114 (314)
Q Consensus 107 g~va~~~a 114 (314)
|......+
T Consensus 69 gsp~n~a~ 76 (116)
T PF03610_consen 69 GSPFNEAA 76 (116)
T ss_dssp SHHHHHHH
T ss_pred CccchHHH
Confidence 44444333
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=67.40 E-value=7.8 Score=30.18 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=23.9
Q ss_pred HHHHhCCceEEEEEeCchHHHHHHHHHhccc
Q 021282 89 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 119 (314)
.+++.++..=.++|.|.|+.+|..++...+.
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3355677666688999999999999987643
No 268
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.86 E-value=7.6 Score=31.48 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=25.8
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhcc
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.+.+++.++..=.++|.|.|+.+|..+|+..+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334445567766678899999999999999875
No 269
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=66.41 E-value=40 Score=28.65 Aligned_cols=77 Identities=18% Similarity=0.355 Sum_probs=40.5
Q ss_pred CceEEEEc--CCCCCh--------------hchHHHHHHHhhCCcE--EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021282 27 AHVVVFLH--GFPEIW--------------YSWRHQMVGVATAGFR--AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (314)
Q Consensus 27 ~p~vlllH--G~~~~~--------------~~~~~~~~~l~~~~~~--vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~ 88 (314)
+.++|++| |.|.+. ..+...+..+.+.|.. =|.+|. |.|.+.... .++ .+...+..
T Consensus 133 ~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n~-~ll~~l~~ 206 (282)
T PRK11613 133 GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HNY-QLLARLAE 206 (282)
T ss_pred CCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HHH-HHHHHHHH
Confidence 56788888 555442 1233444556666774 677786 666542111 011 12222322
Q ss_pred HHHHhCCceEEEEEeCchHHHHHH
Q 021282 89 ILDHLGLAKVFLVAKDFGALTAYM 112 (314)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~va~~ 112 (314)
| ..+ ....++|+|.=+.+...
T Consensus 207 l-~~l--g~Pilvg~SRKsfig~~ 227 (282)
T PRK11613 207 F-HHF--NLPLLVGMSRKSMIGQL 227 (282)
T ss_pred H-HhC--CCCEEEEecccHHHHhh
Confidence 2 223 35678999977766533
No 270
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=65.59 E-value=65 Score=27.92 Aligned_cols=90 Identities=10% Similarity=0.040 Sum_probs=51.1
Q ss_pred CceEEEEcCC----CCCh-hchHHHHHHHhh-CCcEEEEeCCCCCCCCCCC----------C----CCCCCCHHHHHHHH
Q 021282 27 AHVVVFLHGF----PEIW-YSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPP----------A----EPEKTSFQDMVDDL 86 (314)
Q Consensus 27 ~p~vlllHG~----~~~~-~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~----------~----~~~~~~~~~~a~d~ 86 (314)
+..|+++-|- +... .+--.+...|.. ++.++|++-.+|-|.-... . .....++...+...
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 3567888774 2222 222223333333 5789999999999954211 0 00111222222222
Q ss_pred HH-HHHHh-CCceEEEEEeCchHHHHHHHHHh
Q 021282 87 LA-ILDHL-GLAKVFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 87 ~~-~~~~l-~~~~~~lvGhS~Gg~va~~~a~~ 116 (314)
.. +++.. --++++++|.|.|+.+|..+|..
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 22 33333 24689999999999999999875
No 271
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.82 E-value=58 Score=29.93 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=62.6
Q ss_pred eeeeCCEEEE-EEeccCCCCCceEEEEcCCCCChhchHH--HHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021282 8 FIKVQGLNLH-IAEAGADADAHVVVFLHGFPEIWYSWRH--QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (314)
Q Consensus 8 ~~~~~g~~i~-~~~~g~~~~~p~vlllHG~~~~~~~~~~--~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 84 (314)
+++-.+..+. |...|+ -..|-.|..-|+-. .+-|.. .+..|... -++.=|.|=-|.+=-... ..| -+...+
T Consensus 270 ~~D~~reEi~yYFnPGD-~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs-~ey-E~~I~~ 343 (511)
T TIGR03712 270 LVDSKRQEFIYYFNPGD-FKPPLNVYFSGYRP-AEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGS-DEY-EQGIIN 343 (511)
T ss_pred EecCCCCeeEEecCCcC-CCCCeEEeeccCcc-cCcchhHHHHHhcCCC--eEEeeccccccceeeeCc-HHH-HHHHHH
Confidence 3444444444 456664 34455778888854 334432 33444321 355568887776532211 112 234555
Q ss_pred HHHHHHHHhCCc--eEEEEEeCchHHHHHHHHHhc
Q 021282 85 DLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 85 d~~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 117 (314)
-|.+-++.||-+ ..+|-|-|||..=|+.|+++.
T Consensus 344 ~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 344 VIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 556677888865 588999999999999999985
No 272
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=63.70 E-value=4.7 Score=30.90 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=29.9
Q ss_pred EEeCCCCCCCCCCC-CCCCCCCHHHHHHHH----HHHHHHhC----CceEEEEEeCchHH
Q 021282 58 IAPDCRGYGLSDPP-AEPEKTSFQDMVDDL----LAILDHLG----LAKVFLVAKDFGAL 108 (314)
Q Consensus 58 i~~D~~G~G~S~~~-~~~~~~~~~~~a~d~----~~~~~~l~----~~~~~lvGhS~Gg~ 108 (314)
+.+-+-|||..... .....++...+|.-+ ..|.+.++ .+++.|||.|+++.
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44556789977221 122467889999888 45555543 35688888888876
No 273
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=63.44 E-value=4.5 Score=36.55 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=28.6
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeee
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGV 124 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 124 (314)
.+.+.+.++.+=.++|.|.|+.+|..++.+.++.+..+
T Consensus 92 LkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 92 LKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33344457777789999999999999999877765443
No 274
>COG3933 Transcriptional antiterminator [Transcription]
Probab=62.31 E-value=54 Score=29.67 Aligned_cols=75 Identities=21% Similarity=0.206 Sum_probs=58.3
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchH
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg 107 (314)
..||.-||....+..= .++.+|+.. =-++++|+| -..++.+..+.+.+-+++....+=.++=-+||+
T Consensus 110 ~vIiiAHG~sTASSma-evanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTASSMA-EVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHHHHH-HHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 4799999998766543 477888875 578899998 235788999999999998887776677789999
Q ss_pred HHHHHHHH
Q 021282 108 LTAYMFAI 115 (314)
Q Consensus 108 ~va~~~a~ 115 (314)
..+..=..
T Consensus 177 L~~f~~~i 184 (470)
T COG3933 177 LTSFGSII 184 (470)
T ss_pred HHHHHHHH
Confidence 87765443
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=60.67 E-value=14 Score=28.66 Aligned_cols=29 Identities=17% Similarity=0.309 Sum_probs=22.5
Q ss_pred HHHHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 89 ILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
.+++.++..=.++|.|.|+.+|..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33445666667889999999999999754
No 276
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=60.59 E-value=15 Score=31.85 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=21.8
Q ss_pred HHHHHHHhCCc---eEE-EEEeCchHHHHHHHHHhc
Q 021282 86 LLAILDHLGLA---KVF-LVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 86 ~~~~~~~l~~~---~~~-lvGhS~Gg~va~~~a~~~ 117 (314)
+.++-+.+|.. .|. ++|.|+||.||..+|..+
T Consensus 18 L~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 18 LIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 34444445642 244 569999999999999754
No 277
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=60.51 E-value=92 Score=26.15 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=46.4
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCc-EEEEeCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCceEEE-EE
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDP-PAEPEKTSFQDMVDDLLAILDHLGLAKVFL-VA 102 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~D~~G~G~S~~-~~~~~~~~~~~~a~d~~~~~~~l~~~~~~l-vG 102 (314)
.+.||++--|...+...|...++.+...|- +++.. ++ |-|.. +......++..+ ..+.+..+. ++.+ ..
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~-~r--G~s~y~~~~~~~~dl~~i----~~lk~~~~~-pV~~ds~ 202 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILC-ER--GIRTFEKATRNTLDLSAV----PVLKKETHL-PIIVDPS 202 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-EC--CCCCCCCCCcCCcCHHHH----HHHHHhhCC-CEEEcCC
Confidence 367999999999999999999988877665 44443 33 33433 222222333332 233333454 7888 79
Q ss_pred eCch
Q 021282 103 KDFG 106 (314)
Q Consensus 103 hS~G 106 (314)
||.|
T Consensus 203 Hs~G 206 (260)
T TIGR01361 203 HAAG 206 (260)
T ss_pred CCCC
Confidence 9988
No 278
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=60.03 E-value=9.9 Score=35.51 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=26.2
Q ss_pred HHHHH-HHhCCceEEEEEeCchHHHHHHHHHhc
Q 021282 86 LLAIL-DHLGLAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 86 ~~~~~-~~l~~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
+.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34555 578999999999999999998888655
No 279
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=59.30 E-value=5.4 Score=35.48 Aligned_cols=40 Identities=20% Similarity=0.271 Sum_probs=30.9
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeE
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 125 (314)
+.+.+++.|+-+=++.|.|.|+.+|..+|..-++.+..+.
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555688787899999999999999997666665554
No 280
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=58.36 E-value=58 Score=23.53 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=44.7
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCc-hH
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF-GA 107 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~-Gg 107 (314)
.||.-|| .-.......+..+....-++.++++.- ..++.++.+.+.++++.+.-++=.++=.++ ||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~-----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP-----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC-----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 5788899 333344445555554434777777652 136778888899989988643333444555 77
Q ss_pred HHHHHHH
Q 021282 108 LTAYMFA 114 (314)
Q Consensus 108 ~va~~~a 114 (314)
.......
T Consensus 70 Sp~n~~~ 76 (122)
T cd00006 70 SPNNAAA 76 (122)
T ss_pred CHHHHHH
Confidence 6655433
No 281
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=57.36 E-value=12 Score=34.97 Aligned_cols=49 Identities=18% Similarity=0.334 Sum_probs=33.8
Q ss_pred cccEEEEecCCCcccCC-CCchhhhcccccc-ccCCCceEEEeCCCCCCcc
Q 021282 247 KVPALLIMGDKDYFLKF-PGIEDYIRSGKAK-DLVPNLEIIHLPEGSHFVQ 295 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~ 295 (314)
..|++|++|+.|.++|. ...+.|....+.. ......+++.++++-|+=.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 57999999999999975 4455565433322 2224578888999988643
No 282
>COG3621 Patatin [General function prediction only]
Probab=56.82 E-value=18 Score=31.20 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhCC----ceEEEE-EeCchHHHHHHHHHhccc
Q 021282 81 DMVDDLLAILDHLGL----AKVFLV-AKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 81 ~~a~d~~~~~~~l~~----~~~~lv-GhS~Gg~va~~~a~~~p~ 119 (314)
.+..++.+.+++... +.++++ |.|.||.+++.+|+..+.
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCC
Confidence 566677778887543 346666 999999999999986643
No 283
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=54.61 E-value=17 Score=30.43 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=24.7
Q ss_pred HHHHHhCCceE-EEEEeCchHHHHHHHHHhcccce
Q 021282 88 AILDHLGLAKV-FLVAKDFGALTAYMFAIQHQERV 121 (314)
Q Consensus 88 ~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v 121 (314)
+.+++.++.++ .++|.|.|+.+|..+++..+.+.
T Consensus 18 ~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~~ 52 (266)
T cd07208 18 DAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGRA 52 (266)
T ss_pred HHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcchH
Confidence 33344566534 68899999999999999876543
No 284
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=54.56 E-value=11 Score=29.82 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=24.5
Q ss_pred eEEEEcC---CCCChhchHHHHHHHhhCCcEEEEeC
Q 021282 29 VVVFLHG---FPEIWYSWRHQMVGVATAGFRAIAPD 61 (314)
Q Consensus 29 ~vlllHG---~~~~~~~~~~~~~~l~~~~~~vi~~D 61 (314)
.||++|- ...+......+++.|.++||+.+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5899992 33455566777888888999998874
No 285
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=54.38 E-value=6.9 Score=35.19 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeE
Q 021282 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (314)
Q Consensus 84 ~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 125 (314)
.-+.++ .+.++.+=.++|.|.|+.+|..++.+.++.+..++
T Consensus 84 GVlkaL-~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 84 GVVKAL-LDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHH-HhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 334444 44477777799999999999999997777665554
No 286
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=54.25 E-value=15 Score=29.96 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=26.3
Q ss_pred eEEEEcCC-CCChhchHHHHHHHhhCCcEEEEeC
Q 021282 29 VVVFLHGF-PEIWYSWRHQMVGVATAGFRAIAPD 61 (314)
Q Consensus 29 ~vlllHG~-~~~~~~~~~~~~~l~~~~~~vi~~D 61 (314)
.||++|.. ..+......++..|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68999964 4556677788888989999998875
No 287
>TIGR03586 PseI pseudaminic acid synthase.
Probab=53.62 E-value=1.5e+02 Score=25.84 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=52.3
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeC
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS 104 (314)
.+.||++--|. ++...|...+..+.+.|. +|+..- +-|..|.......+.. +..+-+..++ ++.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~~----i~~lk~~f~~-pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLRT----IPDLAERFNV-PVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHHH----HHHHHHHhCC-CEEeeCCC
Confidence 36799999999 588899988888876665 455543 3454443222333332 3333444554 77788999
Q ss_pred chHHHHHHHHHhcc
Q 021282 105 FGALTAYMFAIQHQ 118 (314)
Q Consensus 105 ~Gg~va~~~a~~~p 118 (314)
.|-.+++...+.-.
T Consensus 203 ~G~~~~~aAva~GA 216 (327)
T TIGR03586 203 LGILAPVAAVALGA 216 (327)
T ss_pred CchHHHHHHHHcCC
Confidence 99766655555443
No 288
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=53.44 E-value=8.8 Score=33.07 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=26.1
Q ss_pred HHHHHHhCCceEEEEEeCchHHHHHHHHHhcccce
Q 021282 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERV 121 (314)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 121 (314)
.+.+.+.|+.+-++.|.|.|+.+|..++.+.++.+
T Consensus 87 lkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 87 VRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33344457777789999999999999988655433
No 289
>COG0218 Predicted GTPase [General function prediction only]
Probab=51.74 E-value=23 Score=28.26 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=12.6
Q ss_pred EEEeCCCCCCCCCCC
Q 021282 57 AIAPDCRGYGLSDPP 71 (314)
Q Consensus 57 vi~~D~~G~G~S~~~ 71 (314)
+...|+||||....+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 778999999987654
No 290
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=51.13 E-value=1.5e+02 Score=24.83 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=53.6
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCceEEE-EEe
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVDDLLAILDHLGLAKVFL-VAK 103 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~a~d~~~~~~~l~~~~~~l-vGh 103 (314)
.+.||++--|...+...|...++.+.+.|-.=|.+=.||. |..+.... ..++..+ ..+.+..++ ++++ ..|
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~--~~Y~~~~~n~~dl~ai----~~lk~~~~l-PVivd~SH 193 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV--RGYDVETRNMLDIMAV----PIIQQKTDL-PIIVDVSH 193 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc--CCCCCccccccCHHHH----HHHHHHhCC-CeEECCCC
Confidence 3679999999999999999999998877765456666666 43332111 2222222 222233444 5444 458
Q ss_pred CchH-----HHHHHHHHhcccceeeeEE
Q 021282 104 DFGA-----LTAYMFAIQHQERVSGVIT 126 (314)
Q Consensus 104 S~Gg-----~va~~~a~~~p~~v~~lvl 126 (314)
|.|- .++....+. -.+++++
T Consensus 194 s~G~r~~v~~~a~AAvA~---GAdGl~I 218 (250)
T PRK13397 194 STGRRDLLLPAAKIAKAV---GANGIMM 218 (250)
T ss_pred CCcccchHHHHHHHHHHh---CCCEEEE
Confidence 8674 444444333 3566664
No 291
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=50.95 E-value=1.5e+02 Score=26.77 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=41.1
Q ss_pred ceEEEEcCCCCChh---chHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCceEEEEE
Q 021282 28 HVVVFLHGFPEIWY---SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH--LGLAKVFLVA 102 (314)
Q Consensus 28 p~vlllHG~~~~~~---~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~--l~~~~~~lvG 102 (314)
.||+++.-...... .....+..|.+.|+.|+-++ +|+=-......+.--+.++.++.+...+.. +.-+++.+-|
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlITg 195 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLITA 195 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEEeC
Confidence 47777775432211 13456667878898888554 343111111222334677887777776643 4444566666
Q ss_pred e
Q 021282 103 K 103 (314)
Q Consensus 103 h 103 (314)
-
T Consensus 196 G 196 (399)
T PRK05579 196 G 196 (399)
T ss_pred C
Confidence 6
No 292
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=50.63 E-value=13 Score=31.07 Aligned_cols=43 Identities=21% Similarity=0.112 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCceEE-EEEeCchHHHHHHHHHhcccceeeeEE
Q 021282 83 VDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVIT 126 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lvl 126 (314)
|.-+.+|++.-.+ +++ ++|.|+|+..+..|.++.+.+-.+++.
T Consensus 27 AGVLD~fl~a~~~-~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 27 AGVLDEFLRANFN-PFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHHhccC-CcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 4556677755443 555 569999999999999999998877763
No 293
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=49.91 E-value=63 Score=30.45 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=51.6
Q ss_pred eEEEEcCCC---CChhchHHHHHHHh-hCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhCC--ceEE
Q 021282 29 VVVFLHGFP---EIWYSWRHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV---DDLLAILDHLGL--AKVF 99 (314)
Q Consensus 29 ~vlllHG~~---~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a---~d~~~~~~~l~~--~~~~ 99 (314)
.|+-.||.+ .++..-.+.+...+ +.+..||.+|..=- |+.+.....++.- -.++.=.+.||. +++.
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA-----PEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA-----PEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC-----CCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 577788876 33333333333322 34899999997532 3322222222211 122223344553 6899
Q ss_pred EEEeCchHHHHHHHHHhcc---cc-eeeeEEecC
Q 021282 100 LVAKDFGALTAYMFAIQHQ---ER-VSGVITLGV 129 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~~p---~~-v~~lvl~~~ 129 (314)
++|-|-||.+.+.+|.+-- -| -.++++.=+
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 9999999976665555421 12 256666533
No 294
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=49.56 E-value=15 Score=26.95 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=17.3
Q ss_pred CCCceEEEEcCCCCChhchH
Q 021282 25 ADAHVVVFLHGFPEIWYSWR 44 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~ 44 (314)
+++|-|+-+||++|..-+|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 56888999999999988874
No 295
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.77 E-value=24 Score=28.98 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=23.8
Q ss_pred HHHHHhCCce--EEEEEeCchHHHHHHHHHhccc
Q 021282 88 AILDHLGLAK--VFLVAKDFGALTAYMFAIQHQE 119 (314)
Q Consensus 88 ~~~~~l~~~~--~~lvGhS~Gg~va~~~a~~~p~ 119 (314)
+.+.+.++.+ -.++|-|.|+.+|..+++..+.
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 3344456653 3689999999999999997653
No 296
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=48.63 E-value=1.8e+02 Score=26.07 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=54.2
Q ss_pred ceEEEEcCCCCCh---hchHHHHHHHhhCCcEEEEeCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 021282 28 HVVVFLHGFPEIW---YSWRHQMVGVATAGFRAIAPDCRGY--GLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVF 99 (314)
Q Consensus 28 p~vlllHG~~~~~---~~~~~~~~~l~~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~a~d~~~~~~~---l~~~~~~ 99 (314)
.||+++.-..... ......+..|.+.|+.|+-+..-=+ |... .+..-+++++.+.+.+.+.. +.-+++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g---~g~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG---KGRLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc---CCCCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 3677777543331 1234566678777877766653222 3322 22234778888888877644 4445666
Q ss_pred EEEe------------------CchHHHHHHHHHhcccceeeeEEecC
Q 021282 100 LVAK------------------DFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 100 lvGh------------------S~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+.|- .||..+|..++.+- ..+++++.
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 6665 36677777766653 44555543
No 297
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=47.35 E-value=20 Score=29.72 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=18.3
Q ss_pred EEEEeCchHHHHHHHHHhccccee
Q 021282 99 FLVAKDFGALTAYMFAIQHQERVS 122 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p~~v~ 122 (314)
.++|.|.|+.+|..++. .|+++.
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHH
Confidence 68899999999999984 454443
No 298
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=46.33 E-value=30 Score=28.68 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=18.2
Q ss_pred EEEEeCchHHHHHHHHHhcc
Q 021282 99 FLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p 118 (314)
.++|.|.|+.+|..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999999764
No 299
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=45.60 E-value=2.1e+02 Score=25.41 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=45.9
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCCceEEE-EEe
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-PEKTSFQDMVDDLLAILDHLGLAKVFL-VAK 103 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~a~d~~~~~~~l~~~~~~l-vGh 103 (314)
.+.||++--|...+...|...++.+...|-.=|++=.|| -|..|.. ....++.. +..+-+..++ ++.+ ..|
T Consensus 224 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg--~s~yp~~~~~~ldl~~----i~~lk~~~~~-PV~~d~~H 296 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERG--IRTYEKATRNTLDISA----VPILKQETHL-PVMVDVTH 296 (360)
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCc--cCCCCCCCCCCcCHHH----HHHHHHHhCC-CEEEeCCC
Confidence 367999999999999999999988887665323443444 3544321 11222222 2233333555 6777 799
Q ss_pred Cch
Q 021282 104 DFG 106 (314)
Q Consensus 104 S~G 106 (314)
|.|
T Consensus 297 s~G 299 (360)
T PRK12595 297 STG 299 (360)
T ss_pred CCc
Confidence 988
No 300
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.56 E-value=61 Score=29.16 Aligned_cols=55 Identities=15% Similarity=0.237 Sum_probs=36.3
Q ss_pred ccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccC-----hHHHHHHHHHHH
Q 021282 248 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQS-----PEEVNQLILTFL 310 (314)
Q Consensus 248 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl 310 (314)
--+|+|+|++|+..-.. + .+-+-..++.+.+.|++.|...+.. -++....|.+|-
T Consensus 352 ~rmlFVYG~nDPW~A~~----f----~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEP----F----RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CeEEEEeCCCCCcccCc----c----ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 45899999999876211 1 1222235788999999999876643 235556666664
No 301
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=44.67 E-value=37 Score=31.90 Aligned_cols=101 Identities=13% Similarity=0.153 Sum_probs=57.6
Q ss_pred CceEEEEcCCCCChhchHHHHH------H--HhhCCcEEEEeCCCC----CC-CCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMV------G--VATAGFRAIAPDCRG----YG-LSDPPAEPEKTSFQDMVDDLLAILDHL 93 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~------~--l~~~~~~vi~~D~~G----~G-~S~~~~~~~~~~~~~~a~d~~~~~~~l 93 (314)
+-||=|.=|++-.......+.+ . +...|=.|+.-..-| || +|.............+...+.+++..
T Consensus 258 ~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e- 336 (655)
T COG3887 258 NIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE- 336 (655)
T ss_pred CcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh-
Confidence 4578788888766666554332 1 112233555443322 34 34322211111234455555555554
Q ss_pred CCceEEEEEe------CchHHHHHHHHHhcccceeeeEEecCC
Q 021282 94 GLAKVFLVAK------DFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 94 ~~~~~~lvGh------S~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
.++|+++|| +.|+.+++..-+..-.+ .+.+.+++.
T Consensus 337 -~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 -SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred -cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 679999999 78999999877665544 667777753
No 302
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.15 E-value=31 Score=30.33 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=15.1
Q ss_pred EEEeCchHHHHHHHHHh
Q 021282 100 LVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~~ 116 (314)
+.|.|.||.||..++..
T Consensus 45 IaGTStGgIIAa~la~g 61 (344)
T cd07217 45 VGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEecHHHHHHHHHHcC
Confidence 56999999999999864
No 303
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=43.98 E-value=44 Score=29.72 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=29.5
Q ss_pred EEEEc-CCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCC
Q 021282 30 VVFLH-GFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSD 69 (314)
Q Consensus 30 vlllH-G~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~ 69 (314)
|||+| ++|+. |+.+++.|.+.|+.|..+-..+.+...
T Consensus 2 il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCchh---HHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 78998 55654 677999999999999998888876544
No 304
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=43.80 E-value=78 Score=27.89 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=42.9
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
..|+.+-|.-.|+. .+..|.++||.|+.+-+.-+..+.. ..-+...-..|..++.+.||+ ++.++
T Consensus 5 kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGI-p~~~v 69 (356)
T COG0482 5 KVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGI-PLYVV 69 (356)
T ss_pred EEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCC-ceEEE
Confidence 46666667666653 2334667899999999988875211 122444566788888899988 55544
No 305
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=43.63 E-value=28 Score=29.33 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=26.6
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeC
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPD 61 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D 61 (314)
.|||+|-...+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 588999766667777778888888999998875
No 306
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=43.53 E-value=75 Score=23.45 Aligned_cols=8 Identities=50% Similarity=1.186 Sum_probs=6.8
Q ss_pred ceEEEEcC
Q 021282 28 HVVVFLHG 35 (314)
Q Consensus 28 p~vlllHG 35 (314)
..++|+||
T Consensus 58 ~~viFvHG 65 (150)
T COG3727 58 RCVIFVHG 65 (150)
T ss_pred eEEEEEee
Confidence 37999998
No 307
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=43.15 E-value=34 Score=29.41 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCc---eEE-EEEeCchHHHHHHHHH
Q 021282 83 VDDLLAILDHLGLA---KVF-LVAKDFGALTAYMFAI 115 (314)
Q Consensus 83 a~d~~~~~~~l~~~---~~~-lvGhS~Gg~va~~~a~ 115 (314)
+.-+.++.+.++.. .|. ++|.|.||.||..++.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 33444555555532 133 6699999999999986
No 308
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=42.13 E-value=52 Score=26.45 Aligned_cols=60 Identities=23% Similarity=0.371 Sum_probs=39.8
Q ss_pred cccEEEEecCCCcccCCCCchhhhccccccccCCC-ceEEEeCCCCCCcccc-ChHHHHHHHHHHH
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPN-LEIIHLPEGSHFVQEQ-SPEEVNQLILTFL 310 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 310 (314)
.+|..+.....|....... ......+.+..++ .+++.++ ++|+-++. +..++++.|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~---~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDR---LEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHC---GGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchh---hhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 4678888888887653211 1111224555554 6788887 69988887 7788988888875
No 309
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=41.97 E-value=2.4e+02 Score=24.69 Aligned_cols=84 Identities=12% Similarity=0.060 Sum_probs=51.6
Q ss_pred CCceEEEEcCCCCChhchHHHHHHHhhCCcE---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEE
Q 021282 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVA 102 (314)
Q Consensus 26 ~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvG 102 (314)
.+.||++--|. ++...|...+..+.+.|.. ++..- .-|..|.......+.. +..+-+..++ ++.+-+
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llh----C~s~YP~~~~~~nL~~----I~~Lk~~f~~-pVG~Sd 201 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLH----CTTEYPAPFEDVNLNA----MDTLKEAFDL-PVGYSD 201 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEE----ECCCCCCCcccCCHHH----HHHHHHHhCC-CEEECC
Confidence 36789999999 5888999888888766643 33332 2243333323334333 3334444554 777889
Q ss_pred eCchHHHHHHHHHhccc
Q 021282 103 KDFGALTAYMFAIQHQE 119 (314)
Q Consensus 103 hS~Gg~va~~~a~~~p~ 119 (314)
||.|-.++....+.-..
T Consensus 202 Ht~G~~~~~aAvalGA~ 218 (329)
T TIGR03569 202 HTLGIEAPIAAVALGAT 218 (329)
T ss_pred CCccHHHHHHHHHcCCC
Confidence 99997666555554443
No 310
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=41.74 E-value=28 Score=29.79 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccce
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERV 121 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 121 (314)
+.-+.++.+ .++.+=.+.|.|.|+.+|..++....+.+
T Consensus 85 ~Gvl~aL~e-~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 85 LGVVKALWE-QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHHH-cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 334444443 56667779999999999999998655444
No 311
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=41.30 E-value=1.7e+02 Score=22.93 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=36.0
Q ss_pred ceEEEEc-CCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCc
Q 021282 28 HVVVFLH-GFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL-AILDHLGLA 96 (314)
Q Consensus 28 p~vlllH-G~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~-~~~~~l~~~ 96 (314)
.||+++. -.+.+... ...+..|.+.|+.++-+.. |+- ...-+++++++.+. ++++.||++
T Consensus 113 ~pv~i~P~~m~~~~~~-~~Nl~~L~~~G~~ii~P~~-g~~-------~~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 113 RKLVLVPRETPLNSIH-LENMLRLSRMGAIILPPMP-AFY-------TRPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred CCEEEEeCCCcCCHHH-HHHHHHHHHCCCEEECCCC-ccc-------CCCCCHHHHHHHHHHHHHHHcCCC
Confidence 4555555 22222222 3355678788999876654 431 11247888888777 588888874
No 312
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=39.03 E-value=43 Score=27.83 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=17.7
Q ss_pred EEEEeCchHHHHHHHHHhcc
Q 021282 99 FLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~p 118 (314)
.+.|.|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 38999999999999998765
No 313
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=38.42 E-value=1.9e+02 Score=22.85 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=37.6
Q ss_pred CceEEEEcCCCCChhchH-----HHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCce
Q 021282 27 AHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL-AILDHLGLAK 97 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~-~~~~~l~~~~ 97 (314)
+.|++++.- .+|. ..+..|.+.|+.|+-+.. |+- .. +.|++++++.+. ++++.||++.
T Consensus 115 ~~pvii~P~-----~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~--a~-----p~~~~~~~~~~v~~~~~~l~~~~ 178 (185)
T PRK06029 115 RRRLVLCVR-----ETPLHLGHLRNMTKLAEMGAIIMPPVP-AFY--HR-----PQTLEDMVDQTVGRVLDLFGIEH 178 (185)
T ss_pred CCCEEEEec-----cccCCHHHHHHHHHHHHCcCEEECCCc-ccc--cC-----CCCHHHHHHHHHHHHHHhcCCCC
Confidence 346666661 3442 456677777888877665 321 11 248899998887 6899998753
No 314
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.31 E-value=40 Score=28.18 Aligned_cols=20 Identities=10% Similarity=0.519 Sum_probs=14.4
Q ss_pred HHHHh-CCceEEEEEeCchHH
Q 021282 89 ILDHL-GLAKVFLVAKDFGAL 108 (314)
Q Consensus 89 ~~~~l-~~~~~~lvGhS~Gg~ 108 (314)
+.+.+ .++.++++|||+|..
T Consensus 227 ~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 227 FFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHhhhcCCCEEEEEeCCCchh
Confidence 33444 457899999999974
No 315
>PRK09936 hypothetical protein; Provisional
Probab=37.30 E-value=1.2e+02 Score=25.83 Aligned_cols=51 Identities=20% Similarity=0.267 Sum_probs=40.3
Q ss_pred ChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 021282 39 IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL 95 (314)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~ 95 (314)
+...|......+...|++.+.+-.-+||.|+... -+.+..+..+...+.|+
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCC
Confidence 3557998888888899999999999999986542 25677777777777776
No 316
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=36.88 E-value=2.1e+02 Score=22.69 Aligned_cols=71 Identities=17% Similarity=0.239 Sum_probs=47.9
Q ss_pred HHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhc-c-cceeee
Q 021282 47 MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH-Q-ERVSGV 124 (314)
Q Consensus 47 ~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~-p-~~v~~l 124 (314)
++.+..+++.+|.+|=+|.... -....+++.++++.+....++||=-+..+.-.+..+..+ . -.+.++
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~~----------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~l 145 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSPR----------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGL 145 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSST----------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEE
T ss_pred HHHHhhcCCCEEEEecCCcchh----------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceE
Confidence 3445556799999999987532 346777888888888766777776666666666555444 2 247888
Q ss_pred EEe
Q 021282 125 ITL 127 (314)
Q Consensus 125 vl~ 127 (314)
|+.
T Consensus 146 IlT 148 (196)
T PF00448_consen 146 ILT 148 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 317
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.46 E-value=50 Score=27.54 Aligned_cols=35 Identities=14% Similarity=0.107 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhCCc----eEEEEEeCchHHHHHHHHHhcc
Q 021282 83 VDDLLAILDHLGLA----KVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 83 a~d~~~~~~~l~~~----~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.-+..+.|+ +.+ .-.++|.|.|+.++..+++..+
T Consensus 16 ~GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 16 VGVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred HHHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCC
Confidence 3334444444 433 3358899999999999998765
No 318
>PRK14974 cell division protein FtsY; Provisional
Probab=36.33 E-value=3e+02 Score=24.18 Aligned_cols=67 Identities=19% Similarity=0.199 Sum_probs=45.9
Q ss_pred hhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcc--cceeeeEEe
Q 021282 51 ATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ--ERVSGVITL 127 (314)
Q Consensus 51 ~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lvl~ 127 (314)
...++.+|.+|-.|...+ -..+.+.+..+.+.+.-+.+++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 219 ~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 345789999999977642 1245566677777777667788887777777776665543 356777764
No 319
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=36.22 E-value=92 Score=24.59 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=37.5
Q ss_pred CceEEEEcCCCCChhch--HHHHHHHhhCCcEEEEeC--CCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021282 27 AHVVVFLHGFPEIWYSW--RHQMVGVATAGFRAIAPD--CRGYGLSDPPAEPEKTSFQDMVDDLLAI 89 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~--~~~~~~l~~~~~~vi~~D--~~G~G~S~~~~~~~~~~~~~~a~d~~~~ 89 (314)
++.+|.+-|++++.-+= ..+...|.+.|++++.+| .-=||.+.. -.+|-++=.+.+..+
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniRRv 84 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIRRV 84 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHHHH
Confidence 57899999999886543 234456778899999998 233565533 235555544444443
No 320
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.82 E-value=39 Score=29.21 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=19.2
Q ss_pred CCceEEEEEeCchHHHHHHHHH
Q 021282 94 GLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 94 ~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
+.++..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999999988776
No 321
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=33.85 E-value=47 Score=32.46 Aligned_cols=32 Identities=19% Similarity=0.334 Sum_probs=22.9
Q ss_pred HHHHHHHH---HhCCceEEEEEeCchHHHHHHHHH
Q 021282 84 DDLLAILD---HLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 84 ~d~~~~~~---~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
.++.+.++ .+++.-=.++|.|.||.++..+|+
T Consensus 51 ~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 51 GALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 34444554 445544567899999999999997
No 322
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=33.69 E-value=2.3e+02 Score=24.73 Aligned_cols=113 Identities=15% Similarity=0.052 Sum_probs=64.1
Q ss_pred CCEEEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHH
Q 021282 12 QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLS-DPPAEPEKTSFQDMVDDLLAIL 90 (314)
Q Consensus 12 ~g~~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~a~d~~~~~ 90 (314)
.|+...|+.--+..+ -||+++--.|- ..|..+-+.+...++...-.=++-||.. +..- ...-..-.+-+..++
T Consensus 199 pGV~~~yr~l~~~~~-apvfYvSnSPw--~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~---~sga~rK~~~l~nil 272 (373)
T COG4850 199 PGVSAWYRALTNLGD-APVFYVSNSPW--QLFPTLQEFITNRNFPYGPLLLRRWGGVLDNII---ESGAARKGQSLRNIL 272 (373)
T ss_pred CCHHHHHHHHHhcCC-CCeEEecCChh--HhHHHHHHHHhcCCCCCCchhHhhcCCcccccc---cchhhhcccHHHHHH
Confidence 455555544332111 36666654333 3556555555555555544445555522 1110 112233344566678
Q ss_pred HHhCCceEEEEEeCchH--HHHHHHHHhcccceeeeEEecCC
Q 021282 91 DHLGLAKVFLVAKDFGA--LTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 91 ~~l~~~~~~lvGhS~Gg--~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
..+.-.|++|||-|-== -|=.++++.+|+||.++-+-+..
T Consensus 273 ~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 273 RRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 88888899999988432 33456678899999999876643
No 323
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=32.60 E-value=75 Score=22.45 Aligned_cols=61 Identities=28% Similarity=0.310 Sum_probs=37.6
Q ss_pred EEEEcCCCCChhchHHHHHHHhhC-CcEEEEeCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 021282 30 VVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDC--RGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 93 (314)
Q Consensus 30 vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~D~--~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l 93 (314)
||+|-|.+++.-+- ++..|++. |+.++..|- +-.+..... ...........+.+.+.++.+
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERD-DDEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccC-cchhhHHHHHHHHHHHHHHhh
Confidence 68899999887654 45567665 899999998 655655322 111111334445555666655
No 324
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.53 E-value=67 Score=24.37 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=16.3
Q ss_pred ceEEEEEeCchHHHHHHHH
Q 021282 96 AKVFLVAKDFGALTAYMFA 114 (314)
Q Consensus 96 ~~~~lvGhS~Gg~va~~~a 114 (314)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4456779999999999999
No 325
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=32.41 E-value=55 Score=19.43 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHHhCCceEEEEEe
Q 021282 77 TSFQDMVDDLLAILDHLGLAKVFLVAK 103 (314)
Q Consensus 77 ~~~~~~a~d~~~~~~~l~~~~~~lvGh 103 (314)
...+.|..|+...++.+.+.++.++|-
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 456789999999999999999988873
No 326
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=31.94 E-value=3.1e+02 Score=23.10 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=45.7
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCceEEE-EEeC
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-GLAKVFL-VAKD 104 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l-~~~~~~l-vGhS 104 (314)
+.||+|--|..++...|...++.+...|-.=+.+=+||. .+ . ..|.....---....++.. ++ ++.+ ..||
T Consensus 134 gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~-~t-~----~~Y~~~~vdl~~i~~lk~~~~~-pV~~D~sHs 206 (266)
T PRK13398 134 KKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI-RT-F----ETYTRNTLDLAAVAVIKELSHL-PIIVDPSHA 206 (266)
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC-CC-C----CCCCHHHHHHHHHHHHHhccCC-CEEEeCCCc
Confidence 679999999999999999988888766654445556664 11 1 1233222211222333333 43 6777 6999
Q ss_pred ch
Q 021282 105 FG 106 (314)
Q Consensus 105 ~G 106 (314)
.|
T Consensus 207 ~G 208 (266)
T PRK13398 207 TG 208 (266)
T ss_pred cc
Confidence 98
No 327
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=31.94 E-value=2.5e+02 Score=22.90 Aligned_cols=60 Identities=22% Similarity=0.342 Sum_probs=33.1
Q ss_pred CceEEEEcCCCCChhchHHHHHH-HhhCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVG-VATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~-l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
.-.|++.||..-++......+.. +.+.|| +|+.--.-|| -..+++++-++.-++++++|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------------P~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------------PLVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC---------------CcHHHHHHHHHHcCCceEEEe
Confidence 34677778876655544444443 334455 4444333222 124566677777788777765
No 328
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.69 E-value=53 Score=28.89 Aligned_cols=66 Identities=18% Similarity=0.245 Sum_probs=49.7
Q ss_pred ccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccc-cChHHHHHHHHHHHhhc
Q 021282 246 VKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFLNKH 313 (314)
Q Consensus 246 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 313 (314)
...+.+.+.+..|.++|....+++... ....--+.+.+-+.++-|..+. ..|..+.+...+|+++.
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~--~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIAL--RREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHH--HHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 356788888999999988777776432 2223345666778899998877 47999999999999764
No 329
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=31.64 E-value=1.9e+02 Score=25.01 Aligned_cols=81 Identities=14% Similarity=0.065 Sum_probs=48.3
Q ss_pred HHHHhhCCcEEEEeCCCCCCCCCCCCC--CCCC--CHHHHHHHHHHHHHHhCCceEE------EEEeCc-----------
Q 021282 47 MVGVATAGFRAIAPDCRGYGLSDPPAE--PEKT--SFQDMVDDLLAILDHLGLAKVF------LVAKDF----------- 105 (314)
Q Consensus 47 ~~~l~~~~~~vi~~D~~G~G~S~~~~~--~~~~--~~~~~a~d~~~~~~~l~~~~~~------lvGhS~----------- 105 (314)
...|++.||.|+.+|..-.|..+.-.. ...| ++.+ .+-+.+++++..++-++ .||-|+
T Consensus 17 v~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv 95 (329)
T COG1087 17 VRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNV 95 (329)
T ss_pred HHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhch
Confidence 345677899999999998886543221 1111 2222 12455667777776533 677775
Q ss_pred hHHHHHHHHHhcccceeeeEEecC
Q 021282 106 GALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 106 Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+|.+.+.=|.+. ..|+.+|..++
T Consensus 96 ~gTl~Ll~am~~-~gv~~~vFSSt 118 (329)
T COG1087 96 VGTLNLIEAMLQ-TGVKKFIFSST 118 (329)
T ss_pred HhHHHHHHHHHH-hCCCEEEEecc
Confidence 455555444443 24999998764
No 330
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.30 E-value=3.4e+02 Score=23.99 Aligned_cols=86 Identities=8% Similarity=-0.042 Sum_probs=56.4
Q ss_pred ceEEEEcCCCCChhchHH-HHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc--eEEEEEeC
Q 021282 28 HVVVFLHGFPEIWYSWRH-QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA--KVFLVAKD 104 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~-~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~--~~~lvGhS 104 (314)
.+|+++=||.+.-+.|.. ...-..++||.++.+-.|-+=..-.. .....+......-+.++++..+.+ ++++--.|
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~-s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSA-SRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccc-ccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 378888888888777643 33334466999999999877543221 112335556667788888887743 45555889
Q ss_pred chHHHHHHHH
Q 021282 105 FGALTAYMFA 114 (314)
Q Consensus 105 ~Gg~va~~~a 114 (314)
+||...+.--
T Consensus 118 ~ng~~~~~si 127 (350)
T KOG2521|consen 118 GNGVRLMYSI 127 (350)
T ss_pred CCceeehHHH
Confidence 9997665433
No 331
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.05 E-value=66 Score=26.80 Aligned_cols=35 Identities=23% Similarity=0.144 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhCCc----eEEEEEeCchHHHHHHHHHhcc
Q 021282 83 VDDLLAILDHLGLA----KVFLVAKDFGALTAYMFAIQHQ 118 (314)
Q Consensus 83 a~d~~~~~~~l~~~----~~~lvGhS~Gg~va~~~a~~~p 118 (314)
+.-+..++|+ ++. .-.++|-|.|+.+|..+++..+
T Consensus 20 ~GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 20 VGVASCLLEH-APFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 3344444444 432 3457899999999999998764
No 332
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.93 E-value=90 Score=26.85 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhCC----ceEEEEEeC--chHHHHHHHHHhc
Q 021282 82 MVDDLLAILDHLGL----AKVFLVAKD--FGALTAYMFAIQH 117 (314)
Q Consensus 82 ~a~d~~~~~~~l~~----~~~~lvGhS--~Gg~va~~~a~~~ 117 (314)
-+.-+.+++++.++ +++.++|.| ||..+|..+..+.
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 35667888888764 579999996 9999999998653
No 333
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=30.55 E-value=77 Score=27.14 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=32.0
Q ss_pred ccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccc
Q 021282 248 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE 296 (314)
Q Consensus 248 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 296 (314)
-|++++.|+.|.+.+ ....|. .++.+.-..+++..+++..|....
T Consensus 246 PP~~i~~a~~D~l~~--~~~~~a--~~L~~agv~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 246 PPTLIQTAEFDPLRD--EGEAYA--ERLRAAGVPVELRVYPGMIHGFDL 290 (312)
T ss_pred CCEEEEecCCCcchh--HHHHHH--HHHHHcCCeEEEEEeCCcceeccc
Confidence 489999999999875 334443 334444456799999999995533
No 334
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=30.12 E-value=72 Score=21.88 Aligned_cols=27 Identities=15% Similarity=0.277 Sum_probs=18.8
Q ss_pred eeC-CEEEEEEeccCCCCCceEEEEcCCCCCh
Q 021282 10 KVQ-GLNLHIAEAGADADAHVVVFLHGFPEIW 40 (314)
Q Consensus 10 ~~~-g~~i~~~~~g~~~~~p~vlllHG~~~~~ 40 (314)
.++ ++++.|...++ ..+|++|||.=.+
T Consensus 53 r~g~~yRiif~~~~~----~~vvll~gf~Kk~ 80 (95)
T TIGR02683 53 DFGPGYRVYFTQRGK----VIILLLCGGDKST 80 (95)
T ss_pred cCCCCEEEEEEEECC----EEEEEEeCEeccC
Confidence 444 77887776653 4889999986443
No 335
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=30.10 E-value=2.1e+02 Score=25.37 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=39.6
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
...+|.+-|.-+|+.... -|.+.|++|+++-+....... + .+..+++.++.+.||+ +++++
T Consensus 6 ~kVlValSGGVDSsvaa~----LL~~~G~~V~~v~~~~~~~~~--------~-~~d~~~a~~va~~LgI-p~~vv 66 (360)
T PRK14665 6 KRVLLGMSGGTDSSVAAM----LLLEAGYEVTGVTFRFYEFNG--------S-TEYLEDARALAERLGI-GHITY 66 (360)
T ss_pred CEEEEEEcCCHHHHHHHH----HHHHcCCeEEEEEEecCCCCC--------C-hHHHHHHHHHHHHhCC-CEEEE
Confidence 468888888888865432 233558999888776432111 1 2456778889999998 45554
No 336
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=30.08 E-value=3.2e+02 Score=24.34 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=27.4
Q ss_pred HHhCCceEEEEEeC-chHHHHHHHHHhcccceeeeEEecCC
Q 021282 91 DHLGLAKVFLVAKD-FGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 91 ~~l~~~~~~lvGhS-~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+.|.-.++.++|-. .|+.++..++.. -+..++++|..
T Consensus 131 ~~l~~~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 45666789999886 677777777665 47888998854
No 337
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=29.80 E-value=2.6e+02 Score=21.42 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=51.6
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCc-EEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEe-C
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAK-D 104 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGh-S 104 (314)
+...+++-|-.... ....+...|. +|+.+|.+... .|+.+.+++-+.+++++.+- .++|+|+ +
T Consensus 29 ~~v~~v~~G~~~~~-----~~~~~~~~Gad~v~~~~~~~~~---------~~~~~~~a~al~~~i~~~~p-~~Vl~~~t~ 93 (168)
T cd01715 29 GEVTALVIGSGAEA-----VAAALKAYGADKVLVAEDPALA---------HYLAEPYAPALVALAKKEKP-SHILAGATS 93 (168)
T ss_pred CCEEEEEECCChHH-----HHHHHHhcCCCEEEEecChhhc---------ccChHHHHHHHHHHHHhcCC-CEEEECCCc
Confidence 34666666654332 1233444444 77777654322 35778899999999988773 5666655 5
Q ss_pred chHHHHHHHHHhcc-cceeeeE
Q 021282 105 FGALTAYMFAIQHQ-ERVSGVI 125 (314)
Q Consensus 105 ~Gg~va~~~a~~~p-~~v~~lv 125 (314)
.|.-++-++|++-- ..+.-++
T Consensus 94 ~g~~la~rlAa~L~~~~vtdv~ 115 (168)
T cd01715 94 FGKDLAPRVAAKLDVGLISDVT 115 (168)
T ss_pred cccchHHHHHHHhCCCceeeEE
Confidence 67788888888753 2344444
No 338
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=29.78 E-value=84 Score=24.82 Aligned_cols=95 Identities=12% Similarity=-0.039 Sum_probs=59.6
Q ss_pred eeeeeCCEEEEEEeccCC-CCCceEEEEc--CCCCChhchHHHHHHHhhCCcEE------EEeCCCCCCCCCCCCCCCCC
Q 021282 7 KFIKVQGLNLHIAEAGAD-ADAHVVVFLH--GFPEIWYSWRHQMVGVATAGFRA------IAPDCRGYGLSDPPAEPEKT 77 (314)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~-~~~p~vlllH--G~~~~~~~~~~~~~~l~~~~~~v------i~~D~~G~G~S~~~~~~~~~ 77 (314)
+.+..+|-++.|..+... -.|.+.|+-| ||....+.-.+.+..|.++++.+ +.++.- -
T Consensus 38 ge~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-------------d 104 (184)
T TIGR01626 38 GEIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-------------D 104 (184)
T ss_pred ceEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-------------c
Confidence 345567778888877642 1355544444 89888888889999998888888 776411 1
Q ss_pred CHHHHHHHHHHHHHHhCCc-eEEEEEeCchHHHHHHHH
Q 021282 78 SFQDMVDDLLAILDHLGLA-KVFLVAKDFGALTAYMFA 114 (314)
Q Consensus 78 ~~~~~a~d~~~~~~~l~~~-~~~lvGhS~Gg~va~~~a 114 (314)
+.......+.++++..+.+ ++..+..+-.|.++..+.
T Consensus 105 ~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 105 AIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred chhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 2334445677778877654 333445554665555443
No 339
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=29.77 E-value=37 Score=27.18 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=18.1
Q ss_pred cccEEEEecCCCcccCCCCchhhh
Q 021282 247 KVPALLIMGDKDYFLKFPGIEDYI 270 (314)
Q Consensus 247 ~~P~lii~G~~D~~~~~~~~~~~~ 270 (314)
..|+++++|++|.++|........
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~~~ 191 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADEIR 191 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHHHH
Confidence 445789999999999876655543
No 340
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=29.66 E-value=2e+02 Score=22.23 Aligned_cols=61 Identities=21% Similarity=0.331 Sum_probs=43.4
Q ss_pred ChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCceEEE
Q 021282 39 IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-----EKTSFQDMVDDLLAILDHLGLAKVFL 100 (314)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~a~d~~~~~~~l~~~~~~l 100 (314)
+...|+..+..+.+.|.+.+.+-.-|+|....-+.. ......+..+.+.+..+++|. +|++
T Consensus 18 ~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gm-kv~~ 83 (166)
T PF14488_consen 18 TPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGM-KVFV 83 (166)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCC-EEEE
Confidence 455799989999888999888888888875422111 122445788888888999998 5543
No 341
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=29.51 E-value=2.4e+02 Score=25.73 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=48.4
Q ss_pred HHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhccc--ceeeeEE
Q 021282 49 GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVIT 126 (314)
Q Consensus 49 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl 126 (314)
.+...+|.+|.+|-+|.-.. -..+.+.+..+.+...-..+++|--++-|.-+...|..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred HHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 34445899999999985321 23566677777777766678888888877777777766643 4788887
Q ss_pred e
Q 021282 127 L 127 (314)
Q Consensus 127 ~ 127 (314)
.
T Consensus 247 T 247 (429)
T TIGR01425 247 T 247 (429)
T ss_pred E
Confidence 5
No 342
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=29.33 E-value=29 Score=27.08 Aligned_cols=60 Identities=17% Similarity=0.329 Sum_probs=40.3
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCcccc---ChHHHHHHHHHHHh
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQ---SPEEVNQLILTFLN 311 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~ 311 (314)
.+.-|.+++..++|+.++.+... .+++.. ++.++.+.++||+--.. ...+-...+.+|+.
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~------~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAE------DLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHH------HHHHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 35569999999999998754333 333444 46888888999976553 23445566666654
No 343
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=28.64 E-value=65 Score=31.14 Aligned_cols=78 Identities=14% Similarity=0.185 Sum_probs=49.4
Q ss_pred CCceEEEEcCCCCC----------hhchHHHHHHHhhCCcEEEEeCCCC---CCCCCCCCCCCCC----CHHHHHHHHHH
Q 021282 26 DAHVVVFLHGFPEI----------WYSWRHQMVGVATAGFRAIAPDCRG---YGLSDPPAEPEKT----SFQDMVDDLLA 88 (314)
Q Consensus 26 ~~p~vlllHG~~~~----------~~~~~~~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~~~----~~~~~a~d~~~ 88 (314)
++.+||+.|..... ...|..++..|.+.||++|.+|.-= .|....|...-.- .+.+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 46799999987532 3568889999988899999998321 1222112111001 12245677888
Q ss_pred HHHHhCCce-EEEEEe
Q 021282 89 ILDHLGLAK-VFLVAK 103 (314)
Q Consensus 89 ~~~~l~~~~-~~lvGh 103 (314)
++++.++.- +++||.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 999999853 556654
No 344
>PRK05920 aromatic acid decarboxylase; Validated
Probab=28.38 E-value=3.2e+02 Score=22.03 Aligned_cols=60 Identities=23% Similarity=0.293 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCc
Q 021282 28 HVVVFLHG-FPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL-AILDHLGLA 96 (314)
Q Consensus 28 p~vlllHG-~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~-~~~~~l~~~ 96 (314)
.|||+..- .+.+.. -...+..|.+.|+.|+-++.--|++. -+++++++.+. .+++.||++
T Consensus 131 ~pvvi~P~~m~~~~~-~~~nl~~L~~~G~~ii~P~~g~y~~p--------~~~~~~~~f~~~~~l~~lg~~ 192 (204)
T PRK05920 131 RKLILVPRETPLSLI-HLENMLKLAEAGAIILPAIPAFYHKP--------QTIDDLVDFVVARILDLLGID 192 (204)
T ss_pred CCEEEEeCCCCCCHH-HHHHHHHHHHCCCEEeCCcccccCCC--------CCHHHHHHHHHHHHHHhcCCC
Confidence 45666653 222222 13456677777888766544333322 25667777766 588888874
No 345
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=27.94 E-value=56 Score=28.62 Aligned_cols=29 Identities=21% Similarity=0.126 Sum_probs=20.0
Q ss_pred HHHHHhCCce------EEEEEeCchHHHHHHHHHh
Q 021282 88 AILDHLGLAK------VFLVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 88 ~~~~~l~~~~------~~lvGhS~Gg~va~~~a~~ 116 (314)
+.++..|+.+ -.++|||+|=+.|+.++..
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhCC
Confidence 4455556433 3579999999988887743
No 346
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=27.77 E-value=39 Score=28.39 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=13.4
Q ss_pred cccccEEEEecCCCcccC
Q 021282 245 AVKVPALLIMGDKDYFLK 262 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~ 262 (314)
+|++|+|++.|-.|....
T Consensus 226 ~i~vP~l~v~Gw~D~~~~ 243 (272)
T PF02129_consen 226 KIDVPVLIVGGWYDTLFL 243 (272)
T ss_dssp G--SEEEEEEETTCSSTS
T ss_pred hCCCCEEEecccCCcccc
Confidence 799999999999995443
No 347
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=27.75 E-value=1.4e+02 Score=23.53 Aligned_cols=43 Identities=26% Similarity=0.187 Sum_probs=23.8
Q ss_pred EEEeCCCCCCCCCCCCCC-CCCC----HHHHHHHHHHHHHHhCCceEEEE
Q 021282 57 AIAPDCRGYGLSDPPAEP-EKTS----FQDMVDDLLAILDHLGLAKVFLV 101 (314)
Q Consensus 57 vi~~D~~G~G~S~~~~~~-~~~~----~~~~a~d~~~~~~~l~~~~~~lv 101 (314)
+|++| ||||.+++.... .... ..+++..+.+.++..|. ++.+.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~-~V~lt 49 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA-LVVMT 49 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC-EEEEE
Confidence 56666 799988754222 1111 13456666667777675 44443
No 348
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=27.68 E-value=4.7e+02 Score=23.76 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCC
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG 66 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G 66 (314)
..+-|++||.|..... ..+...+.+.|..|++-|+...+
T Consensus 266 e~~Ril~~G~P~~~~~-~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTNF-REFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchhH-HHHHHHHHHCCCEEEEEeccccc
Confidence 4689999999876532 12233344668999999877654
No 349
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=27.40 E-value=1.4e+02 Score=23.86 Aligned_cols=57 Identities=16% Similarity=0.174 Sum_probs=32.0
Q ss_pred CceEEEEcCCCCChhch---HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021282 27 AHVVVFLHGFPEIWYSW---RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 92 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~---~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~ 92 (314)
..||+++||-.+..-.. ......|.+.+.+|-.-..+|-|.+- ..+..+++.+++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhh
Confidence 56899999998764332 23444566666666666666655432 23566667776653
No 350
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=27.05 E-value=1.2e+02 Score=22.62 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=27.6
Q ss_pred eEEEEcCCCCChhch--HHHHHHHhhCCcEEEEeCCCCCCCCCC
Q 021282 29 VVVFLHGFPEIWYSW--RHQMVGVATAGFRAIAPDCRGYGLSDP 70 (314)
Q Consensus 29 ~vlllHG~~~~~~~~--~~~~~~l~~~~~~vi~~D~~G~G~S~~ 70 (314)
|+|.+-|...+.-.. ..++..|..+||+|.++=.-+||..+.
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 577888887665443 456777888899999887777877654
No 351
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.97 E-value=80 Score=26.29 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCc-----eEE-EEEeCchHHHHHHHHHh
Q 021282 84 DDLLAILDHLGLA-----KVF-LVAKDFGALTAYMFAIQ 116 (314)
Q Consensus 84 ~d~~~~~~~l~~~-----~~~-lvGhS~Gg~va~~~a~~ 116 (314)
.-+.++.+.++.. .|. ++|.|.||.+|..++..
T Consensus 16 ~~L~~le~~~~~~~~~~~~fd~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 16 EILAELEKRLGKPSRIADLFDLIAGTSTGGIIALGLALG 54 (258)
T ss_pred HHHHHHHHHhCCCCchhhccceeeeccHHHHHHHHHhcC
Confidence 3444555555432 233 66999999999999986
No 352
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=26.96 E-value=1.9e+02 Score=24.69 Aligned_cols=47 Identities=28% Similarity=0.295 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhCCce---EEEEEeCchHHHHHHHHHhcccceeeeEEe
Q 021282 80 QDMVDDLLAILDHLGLAK---VFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (314)
Q Consensus 80 ~~~a~d~~~~~~~l~~~~---~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~ 127 (314)
++...-+..+++.|++++ +-=||-.|||. ++.+|.++..+|.++++.
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 446666778889998875 55569999886 455666777788888853
No 353
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=26.90 E-value=1.1e+02 Score=28.43 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=29.4
Q ss_pred HHHHHHHHHH-HHHHhCCceEEEEEe-CchHHHHHHHHHhc
Q 021282 79 FQDMVDDLLA-ILDHLGLAKVFLVAK-DFGALTAYMFAIQH 117 (314)
Q Consensus 79 ~~~~a~d~~~-~~~~l~~~~~~lvGh-S~Gg~va~~~a~~~ 117 (314)
++.+++|+.. +.+.++..+-.++|| |=||.+|..++.+-
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence 6788999875 556788778778887 88999999888774
No 354
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
Probab=26.71 E-value=2.2e+02 Score=26.32 Aligned_cols=60 Identities=23% Similarity=0.198 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEE--EEEeCchHHHHHHHHHhcccc
Q 021282 61 DCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVF--LVAKDFGALTAYMFAIQHQER 120 (314)
Q Consensus 61 D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~--lvGhS~Gg~va~~~a~~~p~~ 120 (314)
--||-|.=++++..+-||++++++-|.++-+.-+..++. |+...-=+.++.-.|-.+++.
T Consensus 269 ~~pG~~~ISP~pHHDiysieDLaqlI~dLk~~~~~~~I~VKlva~~~v~~iaagvakA~AD~ 330 (485)
T COG0069 269 SPPGVGLISPPPHHDIYSIEDLAQLIKDLKEANPWAKISVKLVAEHGVGTIAAGVAKAGADV 330 (485)
T ss_pred CCCCCCCcCCCCcccccCHHHHHHHHHHHHhcCCCCeEEEEEecccchHHHHhhhhhccCCE
Confidence 357888777776677899999999999987766676643 554444455555566555553
No 355
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=26.50 E-value=4.4e+02 Score=24.06 Aligned_cols=69 Identities=23% Similarity=0.319 Sum_probs=44.6
Q ss_pred HHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhccc--ceeeeEE
Q 021282 49 GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVIT 126 (314)
Q Consensus 49 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lvl 126 (314)
.+...+|.+|.+|-+|....+ +.+.+.+..+.+.+..+.+++|--++-|.-+...|..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIl 246 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVL 246 (428)
T ss_pred HHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEE
Confidence 344568999999999975321 2455566666666666667777666666666666655432 4667776
Q ss_pred e
Q 021282 127 L 127 (314)
Q Consensus 127 ~ 127 (314)
.
T Consensus 247 T 247 (428)
T TIGR00959 247 T 247 (428)
T ss_pred e
Confidence 5
No 356
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=26.47 E-value=1.6e+02 Score=22.63 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhCC----ceEEEEEeC--chHHHHHHHHHh
Q 021282 79 FQDMVDDLLAILDHLGL----AKVFLVAKD--FGALTAYMFAIQ 116 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~----~~~~lvGhS--~Gg~va~~~a~~ 116 (314)
+..-+.-+.++++..++ +++.++|.| .|-.++..+..+
T Consensus 16 ~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 16 VPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp --HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45667778888888653 589999999 688888888876
No 357
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=26.27 E-value=1.5e+02 Score=22.41 Aligned_cols=45 Identities=9% Similarity=0.026 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
++.++++..++++++++|-+...+|.......+..-++-.++.++
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da 133 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADA 133 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccc
Confidence 577778899999999999999877766554333333444554443
No 358
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.23 E-value=55 Score=25.14 Aligned_cols=23 Identities=22% Similarity=0.170 Sum_probs=17.2
Q ss_pred CceEEEEEeCchHHHHHHHHHhc
Q 021282 95 LAKVFLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 95 ~~~~~lvGhS~Gg~va~~~a~~~ 117 (314)
..--.+.|.|.||.+|..++...
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCccEEEEcChhhhhHHHHHhCC
Confidence 33355789999999998888763
No 359
>PF15566 Imm18: Immunity protein 18
Probab=26.09 E-value=92 Score=18.81 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchHH
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~ 108 (314)
+.-+++++..+.+...-+..|++=-||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 456778888888877667799999999985
No 360
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.04 E-value=51 Score=28.07 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=16.3
Q ss_pred EEEEeCchHHHHHHHHHhc
Q 021282 99 FLVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 99 ~lvGhS~Gg~va~~~a~~~ 117 (314)
.++|.|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 3669999999999998754
No 361
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=25.98 E-value=2.2e+02 Score=21.50 Aligned_cols=45 Identities=11% Similarity=-0.013 Sum_probs=33.6
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
++.+.++..|++.++++|.+--.+|......-+..-.+-+++.++
T Consensus 78 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da 122 (157)
T cd01012 78 AFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADA 122 (157)
T ss_pred HHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeC
Confidence 677778899999999999999888877665444444665565554
No 362
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=25.67 E-value=65 Score=36.58 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=24.0
Q ss_pred HHHHHHHhCCceEEEEEeCchHHHHHHHH
Q 021282 86 LLAILDHLGLAKVFLVAKDFGALTAYMFA 114 (314)
Q Consensus 86 ~~~~~~~l~~~~~~lvGhS~Gg~va~~~a 114 (314)
+.++++.+|+++-.++|||+|=+.|+..|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 44567788999999999999998887665
No 363
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=25.50 E-value=3e+02 Score=21.61 Aligned_cols=61 Identities=10% Similarity=0.159 Sum_probs=35.7
Q ss_pred CceEEEEcCCCCC---hhchHHHHHHHhhCCcEEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021282 27 AHVVVFLHGFPEI---WYSWRHQMVGVATAGFRAIAPDCRGY---GLSDPPAEPEKTSFQDMVDDLLAILD 91 (314)
Q Consensus 27 ~p~vlllHG~~~~---~~~~~~~~~~l~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~a~d~~~~~~ 91 (314)
+.||+++.-.... .-.+...+..|.+.|+.|+-+. +|+ |.... +..-+++++++.+.+++.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~---g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGY---GALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccC---CCCCCHHHHHHHHHHHhc
Confidence 4577777743221 1223456677888898888776 555 44322 123467777777766553
No 364
>PRK07877 hypothetical protein; Provisional
Probab=25.21 E-value=1.3e+02 Score=29.52 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=31.1
Q ss_pred HHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecCC
Q 021282 89 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
-.+.|.-.+|.|+|-+.|+.++..+|..- -+..|+++|.-
T Consensus 101 ~Q~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D 140 (722)
T PRK07877 101 EQERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFD 140 (722)
T ss_pred HHHHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCC
Confidence 35566777899999999999998888752 24888998753
No 365
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=24.85 E-value=61 Score=29.21 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=32.8
Q ss_pred cccccEEEEecCCCcccCCCCchhhhccccccccCCCceEEEeCCCCCCccccChHHHHHHHHHHHhh
Q 021282 245 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 312 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 312 (314)
+.++|+|.+.|++|.+.|.+.. .-+.....+.+...|+... ++ +.-+.-...+.+||++
T Consensus 350 r~~~plL~i~~~~D~v~P~eD~------~lia~~s~~gk~~~~~~~~--~~-~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 350 RCPTPLLAINGEDDPVSPIEDS------RLIAESSTDGKALRIPSKP--LH-MGYPQALDEIYKWLED 408 (411)
T ss_dssp -BSS-EEEEEETT-SSS-HHHH------HHHHHTBTT-EEEEE-SSS--HH-HHHHHHHHHHHHHHHH
T ss_pred CCCcceEEeecCCCCCCCHHHH------HHHHhcCCCCceeecCCCc--cc-cchHHHHHHHHHHHHH
Confidence 5789999999999998874321 1123344557888887554 12 2223555667777765
No 366
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.52 E-value=57 Score=28.04 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=17.3
Q ss_pred CCCceEEEEcCCCCChhchH
Q 021282 25 ADAHVVVFLHGFPEIWYSWR 44 (314)
Q Consensus 25 ~~~p~vlllHG~~~~~~~~~ 44 (314)
+.+|-+|=+|||+++.-+|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCeEEEecCCCCCchhHH
Confidence 56889999999999998874
No 367
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.50 E-value=1.3e+02 Score=24.51 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=25.5
Q ss_pred CceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCC
Q 021282 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCR 63 (314)
Q Consensus 27 ~p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~ 63 (314)
.|+.|++-|-....--+ .++..|.++||+|++--.+
T Consensus 6 ~~k~VlItgcs~GGIG~-ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGY-ALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcchhH-HHHHHHHhCCeEEEEEccc
Confidence 57788888765443333 3677899999999997554
No 368
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=23.38 E-value=2e+02 Score=23.98 Aligned_cols=46 Identities=24% Similarity=0.387 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCceEEEEEeCchHH-HH-HHHHHhcccceeeeEEec
Q 021282 83 VDDLLAILDHLGLAKVFLVAKDFGAL-TA-YMFAIQHQERVSGVITLG 128 (314)
Q Consensus 83 a~d~~~~~~~l~~~~~~lvGhS~Gg~-va-~~~a~~~p~~v~~lvl~~ 128 (314)
.+++.+.++..|+++.++|.-|..+. -. +.-+.+.++++.+++.++
T Consensus 30 ~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~~~~r~~g~~~~~ 77 (263)
T cd01311 30 IDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALASNGKARGGATVD 77 (263)
T ss_pred HHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHhhCCCeEEEEEEC
Confidence 66777888899999999987664332 11 111223568898888775
No 369
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=23.09 E-value=1.9e+02 Score=22.06 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=28.6
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-ceEEEEEeCchH
Q 021282 53 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFGA 107 (314)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~-~~~~lvGhS~Gg 107 (314)
.+-.+|++|-.|-= +|-.++|+.+.+.... |. +=+++||-|.|=
T Consensus 66 ~~~~~i~Ld~~Gk~----------~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGKQ----------LSSEEFAKKLERWMNQ-GKSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSEE------------HHHHHHHHHHHHHT-TS-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCcc----------CChHHHHHHHHHHHhc-CCceEEEEEecCCCC
Confidence 46789999988753 4566888888776654 44 347788999983
No 370
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=23.02 E-value=4.6e+02 Score=22.11 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=40.7
Q ss_pred HhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CceEEEEEeCchHHHHHHHHHhcc--cce
Q 021282 50 VATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQ--ERV 121 (314)
Q Consensus 50 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p--~~v 121 (314)
+...+|.+|.+|-+|....+ ..+.+++..+.+... ...+++|--+.-|.-++.-+..+- -.+
T Consensus 150 ~~~~~~D~ViIDT~G~~~~d----------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~ 219 (272)
T TIGR00064 150 AKARNIDVVLIDTAGRLQNK----------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGL 219 (272)
T ss_pred HHHCCCCEEEEeCCCCCcch----------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCC
Confidence 33568999999999987532 244455555555443 455666655555554555444432 236
Q ss_pred eeeEEe
Q 021282 122 SGVITL 127 (314)
Q Consensus 122 ~~lvl~ 127 (314)
.++|+.
T Consensus 220 ~g~IlT 225 (272)
T TIGR00064 220 TGIILT 225 (272)
T ss_pred CEEEEE
Confidence 777765
No 371
>PHA02114 hypothetical protein
Probab=22.89 E-value=1.3e+02 Score=20.83 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=22.0
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEe
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAP 60 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~ 60 (314)
+|+|=--+..+..-|-.++.+|-+.||+||+-
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 45555566666677777777777777887764
No 372
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=22.65 E-value=2.1e+02 Score=22.11 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 84 ~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
.++..+++..|+++++|+|-+.-.+|-.....-+..-.+=.++.|+
T Consensus 103 t~L~~~L~~~gi~~vvi~G~~t~~CV~~Ta~~A~~~Gy~v~vv~Da 148 (179)
T cd01015 103 TSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVREC 148 (179)
T ss_pred CcHHHHHHHcCCCEEEEeeecccHhHHHHHHHHHHCCCeEEEeecc
Confidence 3788889999999999999999888865554444334554555554
No 373
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=22.45 E-value=53 Score=28.42 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=26.8
Q ss_pred ccCCCceEEEeCCCCCCccccChHHHHHHHHHH
Q 021282 277 DLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTF 309 (314)
Q Consensus 277 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 309 (314)
+.+.+..+..++.+||+++.++|+.....+..+
T Consensus 378 ktyknl~f~wilraghmvp~Dnp~~a~hmlr~v 410 (414)
T KOG1283|consen 378 KTYKNLSFFWILRAGHMVPADNPAAASHMLRHV 410 (414)
T ss_pred hhhccceeEEeecccCcccCCCHHHHhhheeec
Confidence 345678889999999999999999887666544
No 374
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=22.43 E-value=2.1e+02 Score=19.28 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHH
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 115 (314)
.+..+-+.||.+.+.+.|-+-...+|..+..
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 3445567899999999999999999987764
No 375
>PF01624 MutS_I: MutS domain I C-terminus.; InterPro: IPR007695 Mismatch repair contributes to the overall fidelity of DNA replication and is essential for combating the adverse effects of damage to the genome. It involves the correction of mismatched base pairs that have been missed by the proofreading element of the DNA polymerase complex. The post-replicative Mismatch Repair System (MMRS) of Escherichia coli involves MutS (Mutator S), MutL and MutH proteins, and acts to correct point mutations or small insertion/deletion loops produced during DNA replication []. MutS and MutL are involved in preventing recombination between partially homologous DNA sequences. The assembly of MMRS is initiated by MutS, which recognises and binds to mispaired nucleotides and allows further action of MutL and MutH to eliminate a portion of newly synthesized DNA strand containing the mispaired base []. MutS can also collaborate with methyltransferases in the repair of O(6)-methylguanine damage, which would otherwise pair with thymine during replication to create an O(6)mG:T mismatch []. MutS exists as a dimer, where the two monomers have different conformations and form a heterodimer at the structural level []. Only one monomer recognises the mismatch specifically and has ADP bound. Non-specific major groove DNA-binding domains from both monomers embrace the DNA in a clamp-like structure. Mismatch binding induces ATP uptake and a conformational change in the MutS protein, resulting in a clamp that translocates on DNA. MutS is a modular protein with a complex structure [], and is composed of: N-terminal mismatch-recognition domain, which is similar in structure to tRNA endonuclease. Connector domain, which is similar in structure to Holliday junction resolvase ruvC. Core domain, which is composed of two separate subdomains that join together to form a helical bundle; from within the core domain, two helices act as levers that extend towards (but do not touch) the DNA. Clamp domain, which is inserted between the two subdomains of the core domain at the top of the lever helices; the clamp domain has a beta-sheet structure. ATPase domain (connected to the core domain), which has a classical Walker A motif. HTH (helix-turn-helix) domain, which is involved in dimer contacts. The MutS family of proteins is named after the Salmonella typhimurium MutS protein involved in mismatch repair. Homologues of MutS have been found in many species including eukaryotes (MSH 1, 2, 3, 4, 5, and 6 proteins), archaea and bacteria, and together these proteins have been grouped into the MutS family. Although many of these proteins have similar activities to the E. coli MutS, there is significant diversity of function among the MutS family members. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein [].This diversity is even seen within species, where many species encode multiple MutS homologues with distinct functions []. Inter-species homologues may have arisen through frequent ancient horizontal gene transfer of MutS (and MutL) from bacteria to archaea and eukaryotes via endosymbiotic ancestors of mitochondria and chloroplasts []. This entry represents the N-terminal domain of proteins in the MutS family of DNA mismatch repair proteins, as well as closely related proteins. The N-terminal domain of MutS is responsible for mismatch recognition and forms a 6-stranded mixed beta-sheet surrounded by three alpha-helices, which is similar to the structure of tRNA endonuclease. Yeast MSH3 [], bacterial proteins involved in DNA mismatch repair, and the predicted protein product of the Rep-3 gene of mouse share extensive sequence similarity. Human MSH has been implicated in non-polyposis colorectal carcinoma (HNPCC) and is a mismatch binding protein.; GO: 0005524 ATP binding, 0030983 mismatched DNA binding, 0006298 mismatch repair; PDB: 1FW6_A 1EWQ_A 1EWR_B 1NNE_B 3THY_B 3THZ_B 3THW_B 3THX_B 2WTU_A 1OH7_A ....
Probab=22.43 E-value=43 Score=23.84 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=24.6
Q ss_pred EEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCC
Q 021282 31 VFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG 66 (314)
Q Consensus 31 lllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G 66 (314)
+-.-|||.+ .++..+..|...||+|..+|+....
T Consensus 56 ~~~~gfp~~--~l~~~l~~Ll~~G~~V~i~~q~~~~ 89 (113)
T PF01624_consen 56 VPMAGFPKS--QLDKYLKKLLEAGYRVAIYEQVETP 89 (113)
T ss_dssp EEEEEEEGG--GHHHHHHHHHHTT-EEEEEEE-S-H
T ss_pred ccEecccHH--HHHHHHHHHHHcCCEEEEEEecCCc
Confidence 556688866 6777788888889999999988653
No 376
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=22.40 E-value=3.9e+02 Score=24.25 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=48.0
Q ss_pred HHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceee
Q 021282 44 RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSG 123 (314)
Q Consensus 44 ~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~ 123 (314)
+.++..|.+.|.+|+++ +| .|.+++-..+...++..+.++-.++ +-||.++..+...+|+....
T Consensus 75 d~vaa~l~~~gi~v~a~----~~----------~~~~~y~~~~~~~l~~~~~~p~~i~--DdGg~~~~~~~~~~~~~~~~ 138 (413)
T cd00401 75 DHAAAAIAAAGIPVFAW----KG----------ETLEEYWWCIEQALKFPDGEPNMIL--DDGGDLTLLIHKKHPELLPG 138 (413)
T ss_pred HHHHHHHHhcCceEEEE----cC----------CCHHHHHHHHHHHHhccCCCCcEEE--ecchHHHHHHHhhhhhhhhc
Confidence 45777777778887775 22 2456777777777776555665555 99999999998888887666
Q ss_pred eEE
Q 021282 124 VIT 126 (314)
Q Consensus 124 lvl 126 (314)
++-
T Consensus 139 ~~G 141 (413)
T cd00401 139 IRG 141 (413)
T ss_pred cEE
Confidence 664
No 377
>TIGR00090 iojap_ybeB iojap-like ribosome-associated protein. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes YbeB from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. More recent work in bacteria suggests that the bacterial iojap-related protein physically associates with ribosomes. The function remains unknown.
Probab=22.07 E-value=90 Score=21.71 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=31.9
Q ss_pred CCcEEEEeCCCCCCCCCCCC-----C-CCCCCHHHHHHHHHHHHHHhCCceEEEEEe
Q 021282 53 AGFRAIAPDCRGYGLSDPPA-----E-PEKTSFQDMVDDLLAILDHLGLAKVFLVAK 103 (314)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~-----~-~~~~~~~~~a~d~~~~~~~l~~~~~~lvGh 103 (314)
++.+|.++|+++. |.... + ....-...+++.+.+.++..+..+..+-|.
T Consensus 13 ka~dI~vldv~~~--~~~~dy~VI~Tg~S~rh~~aia~~v~~~~k~~~~~~~~~EG~ 67 (99)
T TIGR00090 13 KAEDIVVLDVRGK--SSIADYFVIASGTSSRHVKAIADNVEEELKEAGLKPLGVEGL 67 (99)
T ss_pred CCCCEEEEECCCC--CcccCEEEEEEeCCHHHHHHHHHHHHHHHHHcCCCcccccCC
Confidence 3789999999974 32221 0 011135678888888888888766666664
No 378
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=21.64 E-value=1.7e+02 Score=22.29 Aligned_cols=45 Identities=16% Similarity=0.089 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
++.+++++.|++.++|+|-+.-.+|...+..-+..-++=+|+.++
T Consensus 102 ~L~~~L~~~gi~~vil~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da 146 (174)
T PF00857_consen 102 DLDEILRKRGIDTVILCGVATDVCVLATARDAFDRGYRVIVVEDA 146 (174)
T ss_dssp SHHHHHHHTTESEEEEEEESTTTHHHHHHHHHHHTT-EEEEEEEE
T ss_pred cccccccccccceEEEcccccCcEEehhHHHHHHCCCEEEEEChh
Confidence 577788889999999999999998866655444444555555543
No 379
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=21.60 E-value=80 Score=31.43 Aligned_cols=20 Identities=25% Similarity=0.411 Sum_probs=13.1
Q ss_pred eEEEE-EeCchHHHHHHHHHh
Q 021282 97 KVFLV-AKDFGALTAYMFAIQ 116 (314)
Q Consensus 97 ~~~lv-GhS~Gg~va~~~a~~ 116 (314)
++.+| |.|+|+.++..||..
T Consensus 867 PvD~VGGTSIGafiGaLYA~e 887 (1158)
T KOG2968|consen 867 PVDMVGGTSIGAFIGALYAEE 887 (1158)
T ss_pred CeeeeccccHHHhhhhhhhcc
Confidence 55555 677777777776653
No 380
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=21.56 E-value=2.8e+02 Score=22.61 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=25.1
Q ss_pred EEEEEeccCCCCCceEEEEcCCCCChhchHHHHHHHhhC-CcEEE
Q 021282 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAI 58 (314)
Q Consensus 15 ~i~~~~~g~~~~~p~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi 58 (314)
.++....+- +|.+|.+||.+.+ .-++++..+++. +..++
T Consensus 185 MVAirV~~l---KP~aVVlHGi~~~--~vD~lAikiAe~e~IpLv 224 (241)
T COG1709 185 MVAIRVSPL---KPAAVVLHGIPPD--NVDELAIKIAEIERIPLV 224 (241)
T ss_pred eEEEEccCC---CccEEEEecCCcc--chhHHHHHHHhhcCCceE
Confidence 355555554 7899999998876 334566777654 44444
No 381
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.49 E-value=61 Score=29.91 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCceEE-----EEEeCchHHHHHHHHHhc
Q 021282 84 DDLLAILDHLGLAKVF-----LVAKDFGALTAYMFAIQH 117 (314)
Q Consensus 84 ~d~~~~~~~l~~~~~~-----lvGhS~Gg~va~~~a~~~ 117 (314)
-.+.+-+++|..++++ ++|.|.||++|..+.+++
T Consensus 433 lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 433 LQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 3456666777777766 889999999999998865
No 382
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=21.28 E-value=2e+02 Score=21.56 Aligned_cols=44 Identities=9% Similarity=-0.004 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEec
Q 021282 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (314)
Q Consensus 85 d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 128 (314)
++.++++..++++++|+|-+.-.+|........-.-..=.|+-+
T Consensus 100 ~l~~~L~~~~i~~vil~G~~t~~CV~~T~~~a~~~G~~v~vi~D 143 (161)
T cd00431 100 DLDELLRERGIDTLVVCGIATDICVLATARDALDLGYRVIVVED 143 (161)
T ss_pred CHHHHHHHCCCCEEEEEecCcChhHHHHHHHHHHCCCEEEEehh
Confidence 67788899999999999999999887766544433344344333
No 383
>PRK04148 hypothetical protein; Provisional
Probab=21.25 E-value=1.8e+02 Score=21.58 Aligned_cols=44 Identities=11% Similarity=0.031 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeEEecC
Q 021282 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (314)
Q Consensus 82 ~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 129 (314)
+++.+.+.+......++..||--.|..+|..++... ..++.+|.
T Consensus 4 i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 4 IAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred HHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 344443333222235699999999988999888542 24566663
No 384
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=21.16 E-value=2.5e+02 Score=21.45 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=27.1
Q ss_pred cEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHH
Q 021282 55 FRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTA 110 (314)
Q Consensus 55 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va 110 (314)
-.||++|-+|-= +|-.++|+.+.+..+ -+-+=+++||-+.|=.=.
T Consensus 66 ~~~i~LDe~Gk~----------~sS~~fA~~l~~~~~-~g~~i~FvIGGa~G~~~~ 110 (153)
T TIGR00246 66 AHVVTLDIPGKP----------WTTPQLADTLEKWKT-DGRDVTLLIGGPEGLSPT 110 (153)
T ss_pred CeEEEEcCCCCc----------CCHHHHHHHHHHHhc-cCCeEEEEEcCCCcCCHH
Confidence 468888887653 344567766666533 232346677877775433
No 385
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=21.16 E-value=1.4e+02 Score=22.74 Aligned_cols=37 Identities=32% Similarity=0.645 Sum_probs=27.2
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeC
Q 021282 57 AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (314)
Q Consensus 57 vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS 104 (314)
+|.||++|.|.. ..+.+-+.+-.+.+|+++++++-.+
T Consensus 72 aV~pd~r~~G~G-----------~~Ll~~~~~~Ar~~gi~~lf~LTt~ 108 (153)
T COG1246 72 AVHPDYRGSGRG-----------ERLLERLLADARELGIKELFVLTTR 108 (153)
T ss_pred EECHHhcCCCcH-----------HHHHHHHHHHHHHcCCceeeeeecc
Confidence 445578888753 2566777888899999999988653
No 386
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=21.11 E-value=4.6e+02 Score=21.38 Aligned_cols=75 Identities=15% Similarity=0.022 Sum_probs=41.0
Q ss_pred eEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCc
Q 021282 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (314)
Q Consensus 29 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~ 105 (314)
.|+++.....+.......+..+...+..||.+|..-.+.+..+ .-..+-...+..+.+.+-..|.+++.+++.+.
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~--~V~~d~~~~~~~~~~~l~~~g~~~i~~i~~~~ 132 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVP--HVSTDDALAMRLAVRHLVALGHRRIGFASGPG 132 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCC--EEEECcHHHHHHHHHHHHHCCCceEEEEeCCc
Confidence 4565554443332233334556667899999986543312111 01223445555665555556888888886543
No 387
>PRK08105 flavodoxin; Provisional
Probab=21.02 E-value=1.3e+02 Score=22.59 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHhCCce
Q 021282 79 FQDMVDDLLAILDHLGLAK 97 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~ 97 (314)
+-..++.+.+.++.+|-++
T Consensus 100 fc~~~~~ld~~l~~lGa~~ 118 (149)
T PRK08105 100 FCGAGKQFDALLQEQGAKR 118 (149)
T ss_pred HHHHHHHHHHHHHHCCCeE
Confidence 4455666666666655433
No 388
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=20.77 E-value=59 Score=28.31 Aligned_cols=64 Identities=13% Similarity=-0.012 Sum_probs=41.0
Q ss_pred eCCCCCCCCCCCC------------CCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHHHHhcccceeeeE
Q 021282 60 PDCRGYGLSDPPA------------EPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (314)
Q Consensus 60 ~D~~G~G~S~~~~------------~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 125 (314)
+.+|||+..+... ....|+..++++-+.-+++..++.+.. |-|=.|--|..+....|.+++++-
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W~i~~~~--gL~~eg~~Ard~l~~l~~r~~r~~ 306 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRWKIESRT--GLSGEGEKARDYLCALPARLRRFE 306 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHTTGGG----S--HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCccc--CCChHHHHHHHHHHhhHHHHHHHH
Confidence 7789998765321 113588899998666799999998877 999999999999999888887653
No 389
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.64 E-value=62 Score=27.86 Aligned_cols=16 Identities=25% Similarity=0.314 Sum_probs=14.0
Q ss_pred EEEeCchHHHHHHHHH
Q 021282 100 LVAKDFGALTAYMFAI 115 (314)
Q Consensus 100 lvGhS~Gg~va~~~a~ 115 (314)
++|.|.||.||..++.
T Consensus 46 i~GTStGgiiA~~l~~ 61 (309)
T cd07216 46 IGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeccHHHHHHHHhcc
Confidence 6699999999998874
No 390
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=20.61 E-value=3.9e+02 Score=20.45 Aligned_cols=50 Identities=26% Similarity=0.218 Sum_probs=31.6
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCchHHHHHHH
Q 021282 53 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMF 113 (314)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg~va~~~ 113 (314)
.|-.||+.|.+|=-. +-+++|+.+.... ..|-+=++++|-|.|=.=++.-
T Consensus 66 ~~~~vi~Ld~~Gk~~----------sSe~fA~~l~~~~-~~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 66 KGSYVVLLDIRGKAL----------SSEEFADFLERLR-DDGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCCeEEEEecCCCcC----------ChHHHHHHHHHHH-hcCCeEEEEEeCcccCCHHHHH
Confidence 467999999987543 4456666665443 3452336677888885544443
No 391
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=20.51 E-value=1.6e+02 Score=22.80 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=36.3
Q ss_pred cccccEEEEecCCCccc-CCCCchhhhcccccccc-CCCceEEEeCCCCCCcc-ccChHHHHHHHHHH
Q 021282 245 AVKVPALLIMGDKDYFL-KFPGIEDYIRSGKAKDL-VPNLEIIHLPEGSHFVQ-EQSPEEVNQLILTF 309 (314)
Q Consensus 245 ~i~~P~lii~G~~D~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~f 309 (314)
.+++|+.++.|++|... +.... ..+.+. ....+++.++ ++|+-+ .+++..+.+.|..|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~------~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDP------DGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCc------ccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 47899999999998643 11111 112222 3457888887 577665 46677777766655
No 392
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=20.47 E-value=1.3e+02 Score=25.36 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=41.3
Q ss_pred CceEEEEcCCCCChh--chHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEe
Q 021282 27 AHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAK 103 (314)
Q Consensus 27 ~p~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a~d~~~~~~~l~-~~~~~lvGh 103 (314)
.|.||++.|+-+++- .=..+...+...|++|+++.-|-- -+..-.-+.++-.+|. -..+.|+=-
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt~-------------eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPSA-------------EELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH-------------HHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 589999999976643 334555666677899998844411 1111223556666663 346777766
Q ss_pred CchH
Q 021282 104 DFGA 107 (314)
Q Consensus 104 S~Gg 107 (314)
||=+
T Consensus 122 SWY~ 125 (264)
T TIGR03709 122 SHYE 125 (264)
T ss_pred cccc
Confidence 6533
No 393
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=20.43 E-value=1.5e+02 Score=24.42 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=42.5
Q ss_pred CceEEEEcCCCCChh--chHHHHHHHhhCCcEEEEeCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhC-CceEEEEE
Q 021282 27 AHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV-DDLLAILDHLG-LAKVFLVA 102 (314)
Q Consensus 27 ~p~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~a-~d~~~~~~~l~-~~~~~lvG 102 (314)
.|.||++.|+-+++- .=..+...+...|++|+++..|- -++.. .-+.++-..|. -.++.++=
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt--------------~eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS--------------DRERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC--------------HHHHcChHHHHHHHhCCCCCeEEEEe
Confidence 589999999977643 23445556667788888865441 11222 23556777774 34677776
Q ss_pred eCchHH
Q 021282 103 KDFGAL 108 (314)
Q Consensus 103 hS~Gg~ 108 (314)
-||=+-
T Consensus 96 rSwY~~ 101 (230)
T TIGR03707 96 RSWYNR 101 (230)
T ss_pred Cchhhh
Confidence 666444
No 394
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=20.37 E-value=2.1e+02 Score=22.85 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=31.2
Q ss_pred HHHHHhCCceEEEEEeC-chHHHHHHHHHhcccceeeeEEecCC
Q 021282 88 AILDHLGLAKVFLVAKD-FGALTAYMFAIQHQERVSGVITLGVP 130 (314)
Q Consensus 88 ~~~~~l~~~~~~lvGhS-~Gg~va~~~a~~~p~~v~~lvl~~~~ 130 (314)
+..+.|...++.++|-. +|+.+|..+|.. -+..++++|..
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 45677788889999654 888899988875 47789998854
No 395
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=20.30 E-value=1.1e+02 Score=26.05 Aligned_cols=28 Identities=18% Similarity=0.403 Sum_probs=22.1
Q ss_pred ceEEEEcCCCCChhchHHHHHHHhhCCcEEEEeCC
Q 021282 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDC 62 (314)
Q Consensus 28 p~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~ 62 (314)
|-|+|.-|.+.. ++.|+..||.||.+|+
T Consensus 253 Pmi~fakG~g~~-------Le~l~~tG~DVvgLDW 280 (359)
T KOG2872|consen 253 PMILFAKGSGGA-------LEELAQTGYDVVGLDW 280 (359)
T ss_pred ceEEEEcCcchH-------HHHHHhcCCcEEeecc
Confidence 778888876543 5678888999999986
No 396
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=20.23 E-value=1.3e+02 Score=24.74 Aligned_cols=29 Identities=14% Similarity=0.061 Sum_probs=19.6
Q ss_pred EEEEcCCCCChhchHHHHHHHhhCCcEEEEeCCC
Q 021282 30 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCR 63 (314)
Q Consensus 30 vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~ 63 (314)
=||+.|=|.+.. +..|+++||+|+.+|+.
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 456666555532 34577889999999875
No 397
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=20.15 E-value=5e+02 Score=21.48 Aligned_cols=48 Identities=23% Similarity=0.245 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeCchH--HHHHHHHHh--cccceeeeEEe
Q 021282 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGA--LTAYMFAIQ--HQERVSGVITL 127 (314)
Q Consensus 79 ~~~~a~d~~~~~~~l~~~~~~lvGhS~Gg--~va~~~a~~--~p~~v~~lvl~ 127 (314)
++..++.|.+.++..|.+++ ++|-|-|- .++..+|.+ -|+++-++++-
T Consensus 2 ~~~l~~~L~~~~~~~g~~~v-VvglSGGiDSav~A~La~~Alg~~~v~~v~mp 53 (242)
T PF02540_consen 2 IEALVDFLRDYVKKSGAKGV-VVGLSGGIDSAVVAALAVKALGPDNVLAVIMP 53 (242)
T ss_dssp HHHHHHHHHHHHHHHTTSEE-EEEETSSHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCeE-EEEcCCCCCHHHHHHHHHHHhhhccccccccc
Confidence 45677888888998887555 78999985 344444433 27888888864
No 398
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=20.01 E-value=93 Score=26.04 Aligned_cols=62 Identities=21% Similarity=0.263 Sum_probs=37.1
Q ss_pred cccEEEEecC------CCcccCCCCchhhhccccccccCCCceEEEeCC--CCCCccccChHHHHHHHHHHHh
Q 021282 247 KVPALLIMGD------KDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPE--GSHFVQEQSPEEVNQLILTFLN 311 (314)
Q Consensus 247 ~~P~lii~G~------~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 311 (314)
++.+|-|.|. .|..+|...+... ..-+.......+-.+|.| +.|.-..|+| ++.+.|..||=
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl--~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSL--RYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTH--HHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHH--HHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 5678999998 5666653221111 001222234456666654 7898888877 55588999983
Done!