BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021283
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/308 (69%), Positives = 247/308 (80%), Gaps = 11/308 (3%)
Query: 7 LRQQLEELQKQLGKKLRFEDSVANINSLLRDRFPAASPTLRNQFYSVVCRVATILKTRYT 66
L+ +L++LQKQL KKLRFE SV +I++LLRD + ++SP+LR QFY VV RVAT+LKTRYT
Sbjct: 14 LKLELDDLQKQLNKKLRFEASVCSIHNLLRDHYSSSSPSLRKQFYIVVSRVATVLKTRYT 73
Query: 67 APGFWLAGLRLFELAESLVSDPSQKQHLKACIAKAKEHLHEIDNAPEASEATYNTTNRGY 126
A GFW+AGL LFE AE LVSD S+K+HLK+C+A+AKE L E+DN P S ++GY
Sbjct: 74 ATGFWVAGLSLFEEAERLVSDASEKKHLKSCVAQAKEQLSEVDNQPTES-------SQGY 126
Query: 127 LFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAESSRGLAESINTSETVANLFQELVNN 186
LFEGHLTVD EPPQPQWLVQ NLM+A AS+ ESS G E NT ANL QEL+N
Sbjct: 127 LFEGHLTVDREPPQPQWLVQQNLMSAFASIVG-GESSNGPTE--NTIGETANLMQELING 183
Query: 187 LDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDK 246
LD +IP+IL+ D PR PPASKEVV KLPVI TEE+L K G +AEC ICKENL++GDK
Sbjct: 184 LDMIIPDILD-DGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDK 242
Query: 247 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAQEERKGAANAV 306
MQELPCKHTFHPPCLKPWLDEHNSCPICRHEL TDD YE+WKEREKEA+EERKGA NAV
Sbjct: 243 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKEREKEAEEERKGAENAV 302
Query: 307 RGGEYMYV 314
RGGEYMYV
Sbjct: 303 RGGEYMYV 310
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 187 LDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDK 246
L+ +I ++ E D PPASK + LP++ +T+ L+ +CA+C ++ G +
Sbjct: 179 LEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNS--EFNQCAVCMDDFEEGTE 236
Query: 247 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAQEERKG 301
+++PCKH +H CL PWL+ HNSCP+CRHEL TDD YE R + AQ G
Sbjct: 237 AKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYE---RRVRGAQGTSGG 288
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 187 LDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDK 246
L+ +I ++ E D PPASK + LP + +T+++L + +CA+C + G
Sbjct: 171 LEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMN--QCAVCMDEFEDGSD 228
Query: 247 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYES 287
++++PCKH FH CL PWL+ HNSCP+CR EL TDD YE+
Sbjct: 229 VKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYEN 269
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA E + LP I +TEE +G EC +CKE+ V
Sbjct: 181 ANGLDTIITQLLNQFENT-GPPPADTEKIQALPTIQITEE---HVGSGLECPVCKEDYTV 236
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 284
G+ +++LPC H FH C+ PWL++H++CP+CR L + A
Sbjct: 237 GESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 277
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA KE + LP + +TEE +G EC +CKE+ +
Sbjct: 185 ANGLDTIITQLLNQFENT-GPPPADKEKIQALPTVPVTEE---HVGSGLECPVCKEDYAL 240
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 284
G+ +++LPC H FH C+ PWL++H+SCP+CR L + A
Sbjct: 241 GESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTA 281
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA E + LP I +TEE +G EC +CKE+ V
Sbjct: 182 ANGLDTIITQLLNQFENT-GPPPADNEKIQALPTIQITEE---HVGSGLECPVCKEDYTV 237
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 284
G+ +++LPC H FH C+ PWL++H++CP+CR L + A
Sbjct: 238 GECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 278
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA + + LP I +TEE +G EC +CKE+ V
Sbjct: 182 ANGLDTIITQLLNQFENT-GPPPADTDKIQALPTIQITEE---HVGFGLECPVCKEDYTV 237
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 284
G+ +++LPC H FH C+ PWL++H++CP+CR L + A
Sbjct: 238 GESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTA 278
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPASK+VV LP +T+T E D +C +C G+ +++LPC+H FH C+ PW
Sbjct: 53 PPASKKVVESLPKVTVTPEQADAA---LKCPVCLLEFEEGETVRQLPCEHLFHSACILPW 109
Query: 265 LDEHNSCPICRHELQTDDHAYESWKEREKEAQEERKGAANAVRGGEY 311
L + NSCP+CRHEL TD YE +K+ EK +++++ + G Y
Sbjct: 110 LGKTNSCPLCRHELPTDSPDYEEFKQ-EKARRQQKEHRLECLHGAMY 155
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA KE + LP + +TEE +G EC +CK++ +
Sbjct: 183 ANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEE---HVGSGLECPVCKDDYAL 238
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHA 284
G+++++LPC H FH C+ PWL++H+SCP+CR L + A
Sbjct: 239 GERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTA 279
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 184 VNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLV 243
N LD +I ++L T PPA KE + LP + +TEE +G EC +CK++ +
Sbjct: 186 ANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEE---HVGSGLECPVCKDDYGL 241
Query: 244 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYE 286
G+ +++LPC H FH C+ PWL++H+SCP+CR L + A +
Sbjct: 242 GEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATD 284
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPA+K VV LPV+ ++ E DK +C +C + ++E+PCKH FH C+ PW
Sbjct: 53 PPAAKAVVQSLPVVIISPEQADK---GVKCPVCLLEFEEQESVREMPCKHLFHTGCILPW 109
Query: 265 LDEHNSCPICRHELQTDDHAYESWKEREKEAQEERKGAANAVRGGEY 311
L++ NSCP+CR EL TD+ YE +K ++KE + +R+ + G Y
Sbjct: 110 LNKTNSCPLCRLELPTDNADYEEFK-KDKERRRQREHRLEDLHGAMY 155
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 186 NLDDVIPEIL-ETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVG 244
LD ++ ++L + ++ P PPA KE + LP +T+T+E +D EC +CKE+ V
Sbjct: 184 GLDAIVTQLLGQLENTGP--PPADKEKITSLPTVTVTQEQVDM---GLECPVCKEDYTVE 238
Query: 245 DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYES 287
+++++LPC H FH C+ PWL+ H++CP+CR L +D +S
Sbjct: 239 EEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQS 281
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Query: 186 NLDDVIPEIL-ETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVG 244
LD ++ ++L + ++ P PPA KE + LP +T+T+E ++ EC +CKE+ V
Sbjct: 185 GLDAIVTQLLGQLENTGP--PPADKEKITSLPTVTVTQE---QVNTGLECPVCKEDYTVE 239
Query: 245 DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDD 282
+K+++LPC H FH C+ PWL+ H++CP+CR L +D
Sbjct: 240 EKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED 277
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 204 VPPASKEVVAKLPV--ITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCL 261
VP ASK + +LPV I ++E G D EC++CKE G K + LPCKH FH C+
Sbjct: 43 VPEASKRAILELPVHEIVKSDE-----GGDLECSVCKEPAEEGQKYRILPCKHEFHEECI 97
Query: 262 KPWLDEHNSCPICRHELQTDDHAYESWKE-REKEA 295
WL + NSCP+CR+EL+TDD YE + R+ EA
Sbjct: 98 LLWLKKTNSCPLCRYELETDDPVYEELRRFRQDEA 132
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 164 RGLAESINTSETVANLFQELVN---------NLDDVIPEILETDSATPRVPPASKEVVAK 214
+G E N + +N+F N LDD+I +++E PA ++V+AK
Sbjct: 320 QGEGEPFNPANMFSNIFNLSGNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAK 379
Query: 215 LPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPIC 274
+ V +E++D+ G EC IC E + D + +LPCKH FH C+KPWL + +C IC
Sbjct: 380 MKVQKPPKELIDEEG---ECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAIC 436
Query: 275 R 275
R
Sbjct: 437 R 437
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 166 LAESINTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEIL 225
LA + + + A + L N +D +++ + P PPA+K VV LP ++
Sbjct: 27 LARRVRGAWSWAPGGRSLFNRMDFEDLGLVDWEHHLP--PPAAKAVVESLP-----RTVI 79
Query: 226 DKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAY 285
D +C +C + + E+PC H FH C+ PWL + NSCP+CRHEL TDD +Y
Sbjct: 80 SSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSY 139
Query: 286 ESWKEREKEAQEERKGAANAVRGGEY 311
E K+ + Q+++ N + G Y
Sbjct: 140 EEHKKDKARRQQQQHRLEN-LHGAMY 164
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPA+K + L ++ + + CA+CK+ +++G+ ++LPC H +H C+ PW
Sbjct: 231 PPAAKSAIEALETFEVSSSEGEMV---MVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPW 287
Query: 265 LDEHNSCPICRHELQTDDHAYESWKEREK 293
L NSCP+CR +L+TDD YE +ER+K
Sbjct: 288 LGTRNSCPVCRFQLETDDAEYE--EERKK 314
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPA+K+VV LP +T+T E D +C +C G+ +++LPC+H FH C+ PW
Sbjct: 53 PPAAKKVVESLPKVTVTPEQADAA---LKCPVCLLEFEEGETVRQLPCEHLFHSSCILPW 109
Query: 265 LDEHNSCPICRHELQTD 281
L + NSCP+CRHEL TD
Sbjct: 110 LGKTNSCPLCRHELPTD 126
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 166 LAESINTSETVANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEIL 225
LA + + + A + L N +D +++ + P PPA+K VV LP ++
Sbjct: 27 LARRVRGAWSWAPGSRSLFNRMDFEDLGLVDWEHHLP--PPAAKAVVESLP-----RTVI 79
Query: 226 DKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAY 285
+ +C +C + + E+PC H FH C+ PWL + NSCP+CRHEL TDD +Y
Sbjct: 80 RSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSY 139
Query: 286 ESWKEREKEAQEERKGAANAVRGGEY 311
E K+ + Q+++ N + G Y
Sbjct: 140 EEHKKDKARRQQQQHRLEN-LHGAMY 164
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 173 SETVANLFQELVNNLD-DVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHD 231
+ + L + L N +D + + +++ D P PPA+K V LP + G
Sbjct: 21 TNMLLELARSLFNRMDFEDLGLVVDWDHHLP--PPAAKTAVENLPRTVIR-------GSQ 71
Query: 232 AE--CAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWK 289
AE C +C + E+PC H FH C+ PWL + NSCP+CRHEL TDD YE K
Sbjct: 72 AELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDTYEEHK 131
Query: 290 EREKEAQEERKGAANAVRGGEY 311
R+K ++++K + G Y
Sbjct: 132 -RDKARKQQQKHRLENLHGAMY 152
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Query: 174 ETVANLFQEL----VNNLD-DVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKL 228
ET N+ EL N +D + + +++ D P PPA+K VV LP +
Sbjct: 18 ETRTNMLLELARSLFNRMDFEDLGLVVDWDHHLP--PPAAKTVVENLPRTVIR------- 68
Query: 229 GHDAE--CAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYE 286
G AE C +C + E+PC H FH C+ PWL + NSCP+CR+EL TDD YE
Sbjct: 69 GSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDDTYE 128
Query: 287 SWKEREKEAQEERKGAANAVRGGEY 311
+ R+K +++++ + G Y
Sbjct: 129 EHR-RDKARKQQQQHRLENLHGAMY 152
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPASKE + LP I +TE+ +G + C IC + G+ ELPC H FH PC+ W
Sbjct: 502 PPASKESIDALPEILVTED-HGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIW 560
Query: 265 LDEHNSCPICR 275
L + +CP+CR
Sbjct: 561 LQKSGTCPVCR 571
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPASKE + LP I +TE+ +G + C IC + G+ ELPC H FH PC+ W
Sbjct: 567 PPASKESIDALPEILVTED-HGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIW 625
Query: 265 LDEHNSCPICR 275
L + +CP+CR
Sbjct: 626 LQKSGTCPVCR 636
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 208 SKEVVAKLPVITL--TEEILDKLGHDAE-CAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
+K+V+ +LP+ T+ E+ +D DAE CA+C EN V D ++ LPCKH FH C+ PW
Sbjct: 239 TKKVIGQLPLHTVKHGEKGIDV---DAENCAVCIENFKVKDVIRILPCKHIFHRICIDPW 295
Query: 265 LDEHNSCPICRHEL 278
L +H +CP+C+ ++
Sbjct: 296 LLDHRTCPMCKLDV 309
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 119 YNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAES-------SRGLAESIN 171
YN N EG+ + E QP +++ N N + SS +E G A+ +
Sbjct: 505 YNEVNESSSDEGNEPAN-EFAQPAFMLDGN--NNLEDDSSVSEDLDVDWSLFDGFADGLG 561
Query: 172 TSETVANLFQELVN--NLDDVIPEILET-----DSATPRV----PPASKEVVAKLPVITL 220
+E ++ + + + L++ + + +ET +S V PPASKE + LP TL
Sbjct: 562 VAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPE-TL 620
Query: 221 TEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICR 275
E +G + C IC + D ELPC H FH PC+ WL + +CP+CR
Sbjct: 621 VLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPASKE + LP TL E +G + C IC + D ELPC H FH PC+ W
Sbjct: 605 PPASKESIDGLPE-TLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIW 663
Query: 265 LDEHNSCPICR 275
L + +CP+CR
Sbjct: 664 LQKSGTCPVCR 674
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 208 SKEVVAKLPVITLT-EEILDKLGHDAECAICKENLLVGDKMQELP-CKHTFHPPCLKPWL 265
+ ++V K+P I +T + LD G+ C++C ++ +G+ ++ LP C H FH PC+ WL
Sbjct: 164 TGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWL 223
Query: 266 DEHNSCPICRHEL 278
H SCP+CR +L
Sbjct: 224 FRHGSCPMCRRDL 236
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 205 PPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
PPASKE + LP TL E +G + C IC + D ELPC H FH PC+ W
Sbjct: 605 PPASKESIDGLPE-TLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIW 663
Query: 265 LDEHNSCPICR 275
L + +CP+CR
Sbjct: 664 LQKSGTCPVCR 674
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 119 YNTTNRGYLFEGHLTVDPEPPQPQWLVQANLMNAVASLSSTAES-------SRGLAESIN 171
YN N EG+ + E QP +++ N N + SS +E G A+ +
Sbjct: 505 YNEVNESSSDEGNEPAN-EFAQPAFMLDGN--NNLEDDSSVSEDLDVDWSLFDGFADGLG 561
Query: 172 TSETVANLFQELVN--NLDDVIPEILET-----DSATPRV----PPASKEVVAKLPVITL 220
+E ++ + + + L++ + + +ET +S V PPASKE + LP TL
Sbjct: 562 VAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPE-TL 620
Query: 221 TEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICR 275
E +G + C IC + D ELPC H FH PC+ WL + +CP+CR
Sbjct: 621 VLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 208 SKEVVAKLPVITL--TEEILDKLGHDAE-CAICKENLLVGDKMQELPCKHTFHPPCLKPW 264
+K+V+ +L + T+ E+ +D DAE CA+C EN V D ++ LPCKH FH C+ PW
Sbjct: 243 TKKVIGQLLLHTVKHGEKGIDV---DAENCAVCIENFKVKDIIRILPCKHIFHRICIDPW 299
Query: 265 LDEHNSCPICRHEL 278
L +H +CP+C+ ++
Sbjct: 300 LLDHRTCPMCKLDV 313
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 198 DSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAEC-AICKENLLVGDKMQELPCKHTF 256
D + + +K+ + K+P T T + D+ D++C AIC E D ++ LPCKH F
Sbjct: 268 DQQSRNLCSVTKKAIMKIP--TKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEF 325
Query: 257 HPPCLKPWLDEHNSCPICRHEL 278
H C+ PWL EH +CP+C+ ++
Sbjct: 326 HKNCIDPWLIEHRTCPMCKLDV 347
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 216 PVITLTEEILDKL--------GHDAE----CAICKENLLVGDKMQELPCKHTFHPPCLKP 263
P+ LT+E +D L G D+E C++C + + G+K+++LPC H FH C+
Sbjct: 584 PIRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDR 643
Query: 264 WLDEHNSCPICR 275
WL E+ +CP+CR
Sbjct: 644 WLSENCTCPVCR 655
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 225 LDKL--GHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 278
LD L G ++CAIC E + G++++ +PC H FH C+ PWL +H++CP CRH +
Sbjct: 279 LDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 231 DAE-CAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 278
DAE CA+C EN D ++ LPCKH FH C+ PWL EH +CP+C+ ++
Sbjct: 260 DAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDV 308
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 208 SKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELP-CKHTFHPPCLKPWLD 266
SK++ LPV+ E + K D++C++C + +K+Q++P C HTFH C+ WL
Sbjct: 88 SKDIREMLPVVIYKESFIVK---DSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 144
Query: 267 EHNSCPICRHEL 278
H +CP+CR L
Sbjct: 145 SHTTCPLCRLSL 156
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 203 RVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLK 262
R+ A+K+ ++KL T+ + + CA+C E+ D ++ LPCKH FH C+
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVD 292
Query: 263 PWLDEHNSCPICR 275
PWL EH +CP+C+
Sbjct: 293 PWLSEHCTCPMCK 305
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 208 SKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELP-CKHTFHPPCLKPWLD 266
SKE+ LP++ E D++C++C + DK+Q++P CKHTFH C+ WL
Sbjct: 77 SKELREMLPIVVFKESFTVM---DSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLT 133
Query: 267 EHNSCPICR 275
H +CP+CR
Sbjct: 134 SHTTCPLCR 142
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 203 RVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLK 262
R+ A+K+ ++KL T+ + + CA+C E+ D ++ LPCKH FH C+
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVD 292
Query: 263 PWLDEHNSCPICR 275
PWL EH +CP+C+
Sbjct: 293 PWLSEHCTCPMCK 305
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 203 RVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLK 262
R+ A+K+ ++KL T+ + + CA+C E+ D ++ LPCKH FH C+
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
Query: 263 PWLDEHNSCPICR 275
PWL EH +CP+C+
Sbjct: 293 PWLSEHCTCPMCK 305
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 203 RVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLK 262
R+ A+K+ ++KL V T+ + + CA+C E D ++ LPC+H FH C+
Sbjct: 246 RLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 305
Query: 263 PWLDEHNSCPICRHEL 278
PWL +H +CP+C+ +
Sbjct: 306 PWLLDHRTCPMCKMNI 321
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 180 FQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKE 239
FQ+ + D I + L DS R+P K+ + + EI+ C++C +
Sbjct: 138 FQDHTDIFDTAISKGLTGDSLN-RIP--------KVRITDTSPEIV-------SCSVCLQ 181
Query: 240 NLLVGDKMQELP-CKHTFHPPCLKPWLDEHNSCPICRHEL 278
+ VG+ ++ LP C H FH PC+ WL H SCP+CR L
Sbjct: 182 DFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 234 CAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREK 293
C++C E + VG+ ++ LPC H FH C+ PWL + +CP+C+ A+ W+E+++
Sbjct: 211 CSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR------AHSGWQEQDE 264
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 177 ANLFQELVNNLDDVIPEILETDSATPRVPPASKEVVAKLPVITLTEEILDKLGHDAECAI 236
N+ E+ N D + E S P A+KE + K ++ E DK ECAI
Sbjct: 224 GNIIYEIQINFD-----VFEASSEAPTT--ATKESLKKSSIVRAVEA--DK---GCECAI 271
Query: 237 CKENLLVGDKMQELPCKHTFHPPCLKPWLDEH-NSCPICRHEL 278
C N + +++ LPC H FH C+ WL H N CP+CR +
Sbjct: 272 CMSNFIKNQRLRVLPCDHRFHVGCVDKWLLGHSNKCPVCRTAI 314
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 203 RVPPASKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLK 262
R+ A+K+ ++KL + T+ + + CA+C E D ++ LPC+H FH C+
Sbjct: 247 RLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 306
Query: 263 PWLDEHNSCPICRHEL 278
PWL +H +CP+C+ +
Sbjct: 307 PWLLDHRTCPMCKMNI 322
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 210 EVVAKLPVITLTEEILDKLGHDA-ECAICKENLLVGDKMQELP-CKHTFHPPCLKPWLDE 267
E + P +E K+G A ECAIC + ++ LP C H FHP C+ WL
Sbjct: 99 ETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQG 158
Query: 268 HNSCPICRHELQTDDHAYESWKEREKEAQEE 298
H +CP+CR L E E + EAQ++
Sbjct: 159 HVTCPVCRTNLAEQTPEPEVVVETDLEAQQQ 189
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 208 SKEVVAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELP-CKHTFHPPCLKPWLD 266
S + + KLP ++ E++ + C IC +++ G+ + LP C HTFH C+ WL
Sbjct: 152 SGDSLRKLPCYIMSSEMVRR--QVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLI 209
Query: 267 EHNSCPICRHELQ 279
H SCPICR ++
Sbjct: 210 RHGSCPICRQAVK 222
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 234 CAICKENLLVGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHEL 278
CAIC E + G++++ +PC H FH C+ PWL +H++CP CRH +
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 212 VAKLPVITLTEEILDKLGHDAECAICKENLLVGDKMQELP-CKHTFHPPCLKPWLDEHNS 270
++ LP++ + D EC+IC L+ GDK + LP C H+FH C+ W H++
Sbjct: 108 LSSLPIVFFRQ---DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHST 164
Query: 271 CPICRHEL 278
CPICR+ +
Sbjct: 165 CPICRNTV 172
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 217 VITLTEEILDKLGHDAECAICKENLLVGDKMQELPCKHTFHPPCLKPWL-DEHNSCPICR 275
++ L +E + EC IC E+ GDK+ LPCKH FH PC+ W+ D ++CP C
Sbjct: 304 LVPLMDESTRRATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCN 363
Query: 276 HEL 278
E+
Sbjct: 364 TEV 366
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 203 RVPPASKEVVAKLPVITLTEEILD-KLGHDAECAICKENLLVGDKMQELPCKHTFHPPCL 261
R+ +KE + L +D +LG C++C + + G+K+++LPC H FH C+
Sbjct: 602 RIRGLTKEQIDNLSTRHYEHNSIDSELG--KICSVCISDYVTGNKLRQLPCMHEFHIHCI 659
Query: 262 KPWLDEHNSCPICR 275
WL E+ +CPICR
Sbjct: 660 DRWLSENCTCPICR 673
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,605,119
Number of Sequences: 539616
Number of extensions: 4704891
Number of successful extensions: 14038
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 13604
Number of HSP's gapped (non-prelim): 547
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)