Your job contains 1 sequence.
>021284
MKTLEAPWPISLFSRIHVDKTPHSSPMLRFCHSTTRLSSFTPLSFTLRRQLPMASFSAQA
VSTGDVKSDANVFELIQKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMV
DFACDADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVAEKDK
AAIRAVYLAKHPNAFWVDFGDFQFMRIEPKAVRYVSGVATALLGSGEFSKEEYQAANVDP
IAQFSKPVASHMNRDHAEDTRIIVQHSTSIPVASAYMLDLDSLGFNVKVLLTVLSGACPQ
VIDLLLDFVGWLRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021284
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079394 - symbol:AT3G03890 species:3702 "Arabi... 976 2.8e-98 1
UNIPROTKB|Q60C03 - symbol:MCA0309 "Putative uncharacteriz... 213 2.0e-17 1
TAIR|locus:2093005 - symbol:AT3G21140 species:3702 "Arabi... 224 3.4e-17 1
TAIR|locus:2017637 - symbol:AT1G51560 species:3702 "Arabi... 199 9.7e-14 1
TIGR_CMR|SPO_0465 - symbol:SPO_0465 "pyridoxamine 5'-phos... 165 6.5e-12 1
TAIR|locus:2094741 - symbol:PGR7 "AT3G21200" species:3702... 115 0.00037 1
>TAIR|locus:2079394 [details] [associations]
symbol:AT3G03890 species:3702 "Arabidopsis thaliana"
[GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0010181 "FMN
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR011576 InterPro:IPR012349 Pfam:PF01243 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010181 GO:GO:0042823
Gene3D:2.30.110.10 SUPFAM:SSF50475 GO:GO:0004733 InterPro:IPR019595
Pfam:PF10615 eggNOG:COG0748 EMBL:AY085802 EMBL:AK316665
IPI:IPI00524897 RefSeq:NP_566216.1 UniGene:At.24380
ProteinModelPortal:Q8LDU1 SMR:Q8LDU1 PaxDb:Q8LDU1 PRIDE:Q8LDU1
EnsemblPlants:AT3G03890.1 GeneID:821082 KEGG:ath:AT3G03890
TAIR:At3g03890 HOGENOM:HOG000265300 InParanoid:Q8LDU1 OMA:CGHMNAD
PhylomeDB:Q8LDU1 ProtClustDB:CLSN2688049 Genevestigator:Q8LDU1
InterPro:IPR014599 PIRSF:PIRSF035903 Uniprot:Q8LDU1
Length = 321
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 198/261 (75%), Positives = 221/261 (84%)
Query: 38 SSFTPLSF-TLRRQ---LPMASF---SAQAVSTGDVKSDANVFELIQKHQEAAARLPPLE 90
+S + +SF T+RR+ L MAS S+QAVS G SD +VF+LIQ H+E AARL P+E
Sbjct: 26 ASISAVSFSTVRRRFSPLTMASAAQSSSQAVSYGSGNSDTDVFKLIQAHEEKAARLSPVE 85
Query: 91 EIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKC 150
EIRTVL+ S+ GMLSTFSQKYEGYPSGSMVDFACDADG+PILAVSSLAVHTKDLLANPKC
Sbjct: 86 EIRTVLNGSICGMLSTFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKC 145
Query: 151 SLLVARDPEDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNAFWVDFGDFQFMRIEPK 210
SLL+ARDPEDRT L ITLHGDA V+EKD+AA+R+ YLAKHP AFWVDFGDF FMRIEPK
Sbjct: 146 SLLIARDPEDRTGLRITLHGDAVLVSEKDQAAVRSAYLAKHPKAFWVDFGDFSFMRIEPK 205
Query: 211 AVRYVSGVATALLGSGEFSKEEYQAANVDPIAQFSKPVASHMNRDHAEDTRIIVQHSTSI 270
VRYVSGVATA LGSGEFSKEEYQAA VDPIAQ++KPV SHMN+DH EDT+ IV + TSI
Sbjct: 206 VVRYVSGVATAFLGSGEFSKEEYQAAKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSI 265
Query: 271 PVASAYMLDLDSLGFNVKVLL 291
PV SA MLDLDSLGFNVK L
Sbjct: 266 PVESALMLDLDSLGFNVKATL 286
>UNIPROTKB|Q60C03 [details] [associations]
symbol:MCA0309 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR012349 GO:GO:0016491 EMBL:AE017282
GenomeReviews:AE017282_GR GO:GO:0010181 Gene3D:2.30.110.10
SUPFAM:SSF50475 InterPro:IPR019595 Pfam:PF10615 OMA:CGHMNAD
InterPro:IPR014599 PIRSF:PIRSF035903 KO:K07226 HOGENOM:HOG000254746
RefSeq:YP_112842.1 ProteinModelPortal:Q60C03 GeneID:3103815
KEGG:mca:MCA0309 PATRIC:22604361 ProtClustDB:CLSK868628
Uniprot:Q60C03
Length = 238
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 63/218 (28%), Positives = 111/218 (50%)
Query: 91 EIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKC 150
E R +L+++ G+LST S GYP GS++ + D +G P++ ++++A HT+++ ANPK
Sbjct: 10 EARALLNQAYDGVLSTHSADVPGYPFGSVMPYCLDREGVPVIYIANIAQHTRNIQANPKV 69
Query: 151 SLLVA-RDPED-RTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNAF-WVDFGDFQFMRI 207
SL+V R D +T+ +TL DA V+E D+ A+ Y + P+A + F F R+
Sbjct: 70 SLIVLDRSVGDVQTNGRLTLLADAQPVSEDDEDAVGR-YFSFFPDARRFHRTHSFAFYRL 128
Query: 208 EPKAVRYVSGVATALLGSGEFSKEEYQAANVDPI-AQFSKPVASHMNRDHAEDTRIIVQH 266
P +RY+ G G + E + +P + + + HMN DH + R +
Sbjct: 129 VPVRLRYIGG-----FGRIHWLSPE-RVLRPNPFRTEEERAMLEHMNTDHRQALRRYCEV 182
Query: 267 S-TSIPVA-SAYMLDLDSLGFNVKVLLTVLSGACPQVI 302
+ ++ M+ +D GF ++V V+ P +
Sbjct: 183 AGVAVDTGCEPAMVGIDREGFQLRVGSRVIRFVFPSPV 220
>TAIR|locus:2093005 [details] [associations]
symbol:AT3G21140 species:3702 "Arabidopsis thaliana"
[GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR012349 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016491 GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475
EMBL:AY099546 EMBL:BT002122 IPI:IPI00527574 RefSeq:NP_188751.1
UniGene:At.27550 ProteinModelPortal:Q8L637 IntAct:Q8L637
PaxDb:Q8L637 PRIDE:Q8L637 EnsemblPlants:AT3G21140.1 GeneID:821666
KEGG:ath:AT3G21140 TAIR:At3g21140 eggNOG:COG0748
HOGENOM:HOG000265831 InParanoid:Q8L637 OMA:GMHHRRT PhylomeDB:Q8L637
ProtClustDB:CLSN2679409 ArrayExpress:Q8L637 Genevestigator:Q8L637
Uniprot:Q8L637
Length = 387
Score = 224 (83.9 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 67/217 (30%), Positives = 111/217 (51%)
Query: 82 AAARLP-PLEEIRTVLDRSVRGMLSTFSQKY----EGYPSGSMVDFACDADGTPILAVSS 136
+A LP P +R +L+++ L T K EGYP GS+VDFA D G PI S
Sbjct: 136 SAHALPRPALAVRNLLEQARFAHLCTVMSKMHHRREGYPFGSLVDFAPDRMGHPIFLFSP 195
Query: 137 LAVHTKDLLANPKCSLLVARDP--EDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNA 194
LA+HT++LL P+CSL+V + P ++ +TL GD ++E ++ Y+AKHP+
Sbjct: 196 LAIHTRNLLNEPRCSLVV-QIPGWSGLSNARVTLFGDVYPLSEDEQEWAHKQYIAKHPHG 254
Query: 195 FWVDFGDFQFMRIEPKA-VRYVSGVATALLGSGEFSKEEYQAANVDPIA-QFSKPVASHM 252
+G+F + R++ + + ++ G T +EY+ D IA + +
Sbjct: 255 PSEQWGNFHYFRMQNISDIYFIGGFGTVAW----VDVKEYEGLQPDKIAVDGGERNLKEL 310
Query: 253 NRDHAEDTRIIVQHSTSIPVASAYMLDLDSLGFNVKV 289
N ++ R ++ ST V A ++ +DS G +V+V
Sbjct: 311 NAIFSKPLRELL--STESEVDDAALISIDSKGIDVRV 345
>TAIR|locus:2017637 [details] [associations]
symbol:AT1G51560 species:3702 "Arabidopsis thaliana"
[GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR012349 EMBL:CP002684 GO:GO:0016491 EMBL:AC024261
GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475
ProtClustDB:CLSN2679409 EMBL:AY150443 IPI:IPI00538431 PIR:B96554
RefSeq:NP_175567.1 UniGene:At.37791 ProteinModelPortal:Q9C8K8
SMR:Q9C8K8 IntAct:Q9C8K8 PRIDE:Q9C8K8 EnsemblPlants:AT1G51560.1
GeneID:841581 KEGG:ath:AT1G51560 TAIR:At1g51560 InParanoid:Q9C8K8
OMA:WINVNEY PhylomeDB:Q9C8K8 Genevestigator:Q9C8K8 Uniprot:Q9C8K8
Length = 392
Score = 199 (75.1 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 60/217 (27%), Positives = 109/217 (50%)
Query: 82 AAARLP-PLEEIRTVLDRSVRGMLSTFSQKY----EGYPSGSMVDFACDADGTPILAVSS 136
+A LP P +R +++++ L T K EGYP GS+VDFA D G PI + S
Sbjct: 140 SAHGLPRPALAVRNLMEQARFAHLCTVMSKMHHRREGYPFGSLVDFAPDPMGHPIFSFSP 199
Query: 137 LAVHTKDLLANPKCSLLVARDP--EDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNA 194
LA+HT+++LA P+C+L+V + P ++ +TL GD + E+ + Y+ KH
Sbjct: 200 LAIHTRNILAEPRCTLVV-QIPGWSCLSNARVTLFGDVYPLPEEQQEWAHKQYMLKHHQG 258
Query: 195 FWVDFGDFQFMRIEPKA-VRYVSGVATALLGSGEFSKEEYQAANVDPIA-QFSKPVASHM 252
+G+F + R++ + + ++ G T + EY+ D IA + +
Sbjct: 259 PSQQWGNFHYFRMQNISDIYFIGGFGTVAW----INVNEYETLQPDKIAVDGGEQNLKEL 314
Query: 253 NRDHAEDTRIIVQHSTSIPVASAYMLDLDSLGFNVKV 289
N ++ R ++ S+ + A ++ +DS G +++V
Sbjct: 315 NAIFSKPLRELL--SSEAELDDAAIISIDSKGIDIRV 349
>TIGR_CMR|SPO_0465 [details] [associations]
symbol:SPO_0465 "pyridoxamine 5'-phosphate oxidase family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR012349 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 GO:GO:0010181
Gene3D:2.30.110.10 SUPFAM:SSF50475 InterPro:IPR014599
PIRSF:PIRSF035903 RefSeq:YP_165728.1 ProteinModelPortal:Q5LW77
GeneID:3193344 KEGG:sil:SPO0465 PATRIC:23374193
HOGENOM:HOG000254746 OMA:LLIHEPP ProtClustDB:CLSK2463870
Uniprot:Q5LW77
Length = 160
Score = 165 (63.1 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 46/123 (37%), Positives = 65/123 (52%)
Query: 91 EIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVHTKDLLANPKC 150
+ R ++D + G L+ Q PS S + A DA G P+ VSSLA HT L A P C
Sbjct: 15 QARALIDSARHGALAVL-QPGGLAPSVSRISLATDAQGMPVSLVSSLAAHTAALEATPAC 73
Query: 151 SLLVARDPEDRTDLV----ITLHGDATSVAE--KDKAAIRAVYLAKHPNA-FWVDFGDFQ 203
+LL+ +P + D + +TLH A + + A+RA YL P A + DFGDF+
Sbjct: 74 ALLIG-EPGAKGDPLTHPRLTLHCSAQLIPRGTPEHDALRARYLMLRPKAGLYADFGDFR 132
Query: 204 FMR 206
F+R
Sbjct: 133 FVR 135
>TAIR|locus:2094741 [details] [associations]
symbol:PGR7 "AT3G21200" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=IDA] [GO:0009767
"photosynthetic electron transport chain" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0033014 "tetrapyrrole biosynthetic process" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IDA] [GO:0070455 "positive
regulation of heme biosynthetic process" evidence=IMP]
InterPro:IPR012349 GO:GO:0009570 EMBL:CP002686 EMBL:AB023045
GO:GO:0016491 GO:GO:0009791 GO:GO:0043495 GO:GO:0009534
GO:GO:0010181 GO:GO:0009767 Gene3D:2.30.110.10 SUPFAM:SSF50475
GO:GO:0033014 GO:GO:0070455 UniGene:At.70384 UniGene:At.8075
EMBL:AY062654 EMBL:BT002574 IPI:IPI00538821 RefSeq:NP_566678.1
ProteinModelPortal:Q9LU39 IntAct:Q9LU39 STRING:Q9LU39 PRIDE:Q9LU39
EnsemblPlants:AT3G21200.1 GeneID:821673 KEGG:ath:AT3G21200
TAIR:At3g21200 InParanoid:Q9LU39 OMA:AWEVEKS PhylomeDB:Q9LU39
ProtClustDB:CLSN2688626 ArrayExpress:Q9LU39 Genevestigator:Q9LU39
Uniprot:Q9LU39
Length = 317
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 82 AAARLP-PLEEIRTVLDRSVRGMLSTFSQKYEGYPSGSMVDFACDADGTPILAVSSLAVH 140
A+ P P E R++++ S G LST + ++G+P G V FA D DGTP+L ++
Sbjct: 54 ASTHKPFPAEVSRSIMELSSVGTLSTLT--HDGWPLGVGVRFAVDKDGTPVLCLNRSVSP 111
Query: 141 TKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNAFWVD-F 199
K + + R P+ I GD T + K +A W + F
Sbjct: 112 DKRSALHVQLEQCGLRTPQCTIQGSIGRPGDDT--------------VLKRLSATWREKF 157
Query: 200 GD-FQFMRIEPKAVRYVSGVATALLGSGEFSKEEYQAANVDPIAQFSKPVASHMNRDHAE 258
G+ + + AV V + + + +Y+ A+ DP+ ++ + + +N ++ E
Sbjct: 158 GEEVKEDSLYVVAVDRVLQMEDFMEDGIWVASSDYKNASPDPLRDIAEDIVNQINANNME 217
Query: 259 DT-RII-VQHSTSIPVASAYMLDLDSLGFNVKV 289
D R V V+ M+ +D LGF+++V
Sbjct: 218 DIFRFCNVYVDLDFVVSETKMIWMDRLGFDLRV 250
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 314 0.00081 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 605 (64 KB)
Total size of DFA: 201 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.93u 0.14s 24.07t Elapsed: 00:00:01
Total cpu time: 23.93u 0.14s 24.07t Elapsed: 00:00:01
Start: Sat May 11 11:18:16 2013 End: Sat May 11 11:18:17 2013