BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021284
         (314 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8IUH2|CREG2_HUMAN Protein CREG2 OS=Homo sapiens GN=CREG2 PE=1 SV=1
          Length = 290

 Score = 41.6 bits (96), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 31/175 (17%)

Query: 84  ARLPPLEEIRTVLDRS-----VRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPIL 132
           A  PP   +R    RS     V G L+T S  +K +G P G+ +  +     ++ G P  
Sbjct: 114 ASAPPGPRLRAATARSLAHASVWGCLATVSTHKKIQGLPFGNCLPVSDGPFNNSTGIPFF 173

Query: 133 AVSSLAVHTKDLLANPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDKA 181
            +++      DL+ NP  SL++             DPED   + +TL G   +V+ ++  
Sbjct: 174 YMTAKDPVVADLMKNPMASLMLPESEGEFCRKNIVDPEDPRCVQLTLTGQMIAVSPEEVE 233

Query: 182 AIRAVYLAKHPNAF-WVDFGDFQF--MRIEPKAVRYVSGVATALLGSGEFSKEEY 233
             +    ++HP    W    ++ F  MRIE   ++   G      G+   S+EEY
Sbjct: 234 FAKQAMFSRHPGMRKWPRQYEWFFMKMRIEHIWLQKWYG------GASSISREEY 282


>sp|O67377|NNR_AQUAE Bifunctional NAD(P)H-hydrate repair enzyme Nnr OS=Aquifex aeolicus
           (strain VF5) GN=nnr PE=3 SV=1
          Length = 499

 Score = 35.8 bits (81), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 126 ADGTPILAVSSLAVHTKDLLANPKCSLLVARDPEDRTDLVITLHGDATSVAEK 178
           ADGTP LA       T D+LA    +L+   D E+   L + LHG A  VAEK
Sbjct: 425 ADGTPALAKGG----TGDVLAGILTALIAKMDTEEALKLGVYLHGLAGKVAEK 473


>sp|P11405|T2M1_MORSP Type-2 restriction enzyme MspI OS=Moraxella sp. GN=mspIR PE=1 SV=1
          Length = 262

 Score = 34.7 bits (78), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 13/104 (12%)

Query: 21  TPHSSPMLRFC-HSTTRLSSFTPLSF--TLRRQLPMASFSAQAVSTGDVKSDANVFELIQ 77
           +P +   +RF  H+ +  S   PL+   + ++++ +A +  + + TG   SD  + ELI+
Sbjct: 95  SPKTDATIRFTFHNQS--SRLVPLNIKHSSKKKVSIAEYDVETICTGVGISDGELKELIR 152

Query: 78  KHQ--EAAARLPPLEEIRTV------LDRSVRGMLSTFSQKYEG 113
           KHQ  ++A    P+++ R         +R +R  ++  ++K EG
Sbjct: 153 KHQNDQSAKLFTPVQKQRLTELLEPYRERFIRWCVTLRAEKSEG 196


>sp|Q8BGC9|CREG2_MOUSE Protein CREG2 OS=Mus musculus GN=Creg2 PE=1 SV=1
          Length = 288

 Score = 34.7 bits (78), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 28/162 (17%)

Query: 93  RTVLDRSVRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPILAVSSLAVHTKDLLA 146
           R++   S  G L+T S  +K +G P GS +  +     ++ G P   +++      DL+ 
Sbjct: 126 RSLAHASSWGCLATVSTHEKIQGLPFGSCLAISDGPVHNSTGIPFFYMTAKDPAVADLVK 185

Query: 147 NPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDKAAIRAVYLAKHPNAF 195
           NP  SL++             DPED     +TL G   +V   +    +    ++HP   
Sbjct: 186 NPTASLVLPESEGEFCRKNIVDPEDPRCARLTLTGRMVTVPPGEVEFAKQAMFSRHPGMR 245

Query: 196 -WVDFGDFQFMRIEPKAV---RYVSGVATALLGSGEFSKEEY 233
            W    ++ FM++  + +   ++  GV+       +  +EEY
Sbjct: 246 KWPRQYEWFFMKMWVEHIWLQKWYGGVS-------DIPREEY 280


>sp|O88668|CREG1_MOUSE Protein CREG1 OS=Mus musculus GN=Creg1 PE=2 SV=1
          Length = 220

 Score = 32.0 bits (71), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 21/129 (16%)

Query: 86  LPPLEE----IRTVLDRSVRGMLSTFS--QKYEGYPSGSMVDFA----CDADGTPILAVS 135
           LPP E+     R V   S  G L+T S  ++  G+P   ++  +     +  G P + +S
Sbjct: 49  LPPREDGPRVARFVTHVSDWGSLATISTIKEVRGWPFADIISISDGPPGEGTGEPYMYLS 108

Query: 136 SLAVHTKDLLANPKCSLLVAR-----------DPEDRTDLVITLHGDATSVAEKDKAAIR 184
            L     DL  NP+ +L ++            DP+    + I + G  T V + ++   R
Sbjct: 109 PLQQAVSDLQENPEATLTMSLAQTVYCRNHGFDPQSPLCVHIMMSGTVTKVNKTEEDYAR 168

Query: 185 AVYLAKHPN 193
                +HP 
Sbjct: 169 DSLFVRHPE 177


>sp|A7YH32|CING_CANFA Cingulin OS=Canis familiaris GN=CGN PE=2 SV=1
          Length = 1190

 Score = 31.6 bits (70), Expect = 8.0,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 17  HVDKTPHSSPMLRFCHSTTRLSSFTPLSFTLRRQLP--MASFSAQAVSTGDVKSDANVFE 74
           HV  T +S  +LR   S T  S    ++  L +  P  M S SA+ + TG  +    V E
Sbjct: 305 HVKATIYS--ILREGSSETETSVRRKVNLVLEQMQPLVMTSGSAKGL-TGQSELSQKVEE 361

Query: 75  LIQKHQEAAARLPPLEEIRTVLDRSVRGMLSTFSQKYE 112
           L QK  E   + P LE  R  L+R ++      SQ  E
Sbjct: 362 LQQKLDEEVKKRPKLESSRLGLERQLQEKAEECSQLQE 399


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.133    0.390 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,942,821
Number of Sequences: 539616
Number of extensions: 4329646
Number of successful extensions: 10348
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 10344
Number of HSP's gapped (non-prelim): 15
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)