BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021288
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1
PE=2 SV=1
Length = 421
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/313 (83%), Positives = 284/313 (90%), Gaps = 4/313 (1%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
LNWHFFFTAMLFVYGRILSQRL NT+T+D+F Y+ VS LIKYHM ICY LYI GF+WFIL
Sbjct: 108 LNWHFFFTAMLFVYGRILSQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWFIL 167
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
TLKKKMYKYQF QYAWTHMILIVVF QSSFTVA+IFEGIFWFLLPASLI+INDI AYIFG
Sbjct: 168 TLKKKMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFG 227
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDP 181
FFFGRTPLIKLSPKKTWEGFIGASV TI SAFVLANI+GRF WLTCPR+DL+TGWL CD
Sbjct: 228 FFFGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQDLSTGWLQCDA 287
Query: 182 GPLFKPESFPLPGWL----PWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKI 237
PLFKPE F LP W+ PWKE+TILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKI
Sbjct: 288 DPLFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKI 347
Query: 238 KDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQKA 297
KDFGDSIPGHGGITDRMDCQMVMAVFAYIY QSFIV QS V+ IL+QILT LT+EEQ+A
Sbjct: 348 KDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVSQSVSVDKILDQILTNLTFEEQQA 407
Query: 298 LYMKLGEILQERL 310
L++KLG++L+++L
Sbjct: 408 LFVKLGQMLKDKL 420
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1
PE=2 SV=1
Length = 424
Score = 536 bits (1380), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/318 (83%), Positives = 288/318 (90%), Gaps = 4/318 (1%)
Query: 1 MLNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFI 60
+LNWHFFFTAMLFVYGR+LSQRLVNTVT DKFLY+ V +KYHMV CYF YI+GF+WFI
Sbjct: 107 LLNWHFFFTAMLFVYGRMLSQRLVNTVTLDKFLYKLVGRFVKYHMVTCYFFYIAGFMWFI 166
Query: 61 LTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIF 120
LTLKKKMYKYQFSQYAWTHMILIVVF QS+FTVA+IFEGIFWFLLPASLIVINDIAAY F
Sbjct: 167 LTLKKKMYKYQFSQYAWTHMILIVVFTQSAFTVANIFEGIFWFLLPASLIVINDIAAYFF 226
Query: 121 GFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCD 180
GFFFGRTPLIKLSPKKTWEGFIGAS+ TI SAF+LAN+ GRFQWLTCPRKDL+TGWL CD
Sbjct: 227 GFFFGRTPLIKLSPKKTWEGFIGASITTIISAFLLANMFGRFQWLTCPRKDLSTGWLDCD 286
Query: 181 PGPLFKPESFPLPGWLP-W---KEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFK 236
PGPLFKPE F LP W P W +EI +LPVQWHAL LGLFASIIAPFGGFFASGFKRAFK
Sbjct: 287 PGPLFKPEYFTLPEWFPAWFLSREIAVLPVQWHALLLGLFASIIAPFGGFFASGFKRAFK 346
Query: 237 IKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQK 296
IKDFGDSIPGHGG+TDRMDCQMVMAVFAYIYHQSFIVPQ+ +EMIL+QI+ LT+EEQ
Sbjct: 347 IKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYHQSFIVPQNLSIEMILDQIILNLTFEEQL 406
Query: 297 ALYMKLGEILQERLFGQS 314
A+Y KLG+I+QER FG+S
Sbjct: 407 AVYKKLGQIIQERTFGES 424
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2
SV=2
Length = 461
Score = 275 bits (703), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 202/315 (64%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L QF LI+YH I + LY++GF F+L
Sbjct: 145 LSWYFLLCVNYFFYGETVADYFATFVQREEQL-QF---LIRYHRFISFALYLAGFCMFVL 200
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF +AWTH+ L++ QS + ++FEG+ WFL+P S ++ NDI AY+FG
Sbjct: 201 SLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNLFEGMIWFLVPISSVICNDITAYLFG 260
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG +T+ F+ A ++ ++Q+ CP R D+ +
Sbjct: 261 FFFGRTPLIKLSPKKTWEGFIGGFFSTVVFGFIAAYVLSKYQYFVCPVEYRSDVNSFVTE 320
Query: 179 CDPGPLFKPESFPLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ +++ LP +L + +++ P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 321 CEPSELFQLQTYSLPPFLKAVLRQERVSLYPFQIHSIALSTFASLIGPFGGFFASGFKRA 380
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F ++Y SFI + +L+Q+L L E+
Sbjct: 381 FKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI--RGPNPSKVLQQLL-VLQPEQ 437
Query: 295 QKALYMKLGEILQER 309
Q +Y L L E+
Sbjct: 438 QLNIYKTLKTHLIEK 452
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2
SV=2
Length = 461
Score = 274 bits (701), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 202/315 (64%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L QF LI+YH I + LY++GF F+L
Sbjct: 145 LSWYFLLCVNYFFYGETVADYFATFVQREEQL-QF---LIRYHRFISFALYLAGFCMFVL 200
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF +AWTH+ L++ QS + ++FEG+ WFL+P S ++ NDI AY+FG
Sbjct: 201 SLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNLFEGMIWFLVPISSVICNDITAYLFG 260
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG +T+ F+ A ++ ++Q+ CP R D+ +
Sbjct: 261 FFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAAYVLSKYQYFVCPVEYRSDVNSFVTE 320
Query: 179 CDPGPLFKPESFPLPGW----LPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ +++ LP + L + +++ P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 321 CEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIHSIALSTFASLIGPFGGFFASGFKRA 380
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F ++Y SFI + +L+Q+L L E+
Sbjct: 381 FKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI--RGPNPSKVLQQLL-VLQPEQ 437
Query: 295 QKALYMKLGEILQER 309
Q +Y L L E+
Sbjct: 438 QLNIYRTLKIHLTEK 452
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1
PE=1 SV=2
Length = 461
Score = 274 bits (701), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 202/315 (64%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L QF LI+YH I + LY++GF F+L
Sbjct: 145 LSWYFLLCVNYFFYGETVADYFATFVQREEQL-QF---LIRYHRFISFALYLAGFCMFVL 200
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF +AWTH+ L++ QS + ++FEG+ WFL+P S ++ NDI AY+FG
Sbjct: 201 SLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNLFEGMIWFLVPISSVICNDITAYLFG 260
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG +T+ F+ A ++ ++Q+ CP R D+ +
Sbjct: 261 FFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAAYVLSKYQYFVCPVEYRSDVNSFVTE 320
Query: 179 CDPGPLFKPESFPLPGW----LPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ +++ LP + L + +++ P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 321 CEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIHSIALSTFASLIGPFGGFFASGFKRA 380
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F ++Y SFI + +L+Q+L L E+
Sbjct: 381 FKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI--RGPNPSKVLQQLL-VLQPEQ 437
Query: 295 QKALYMKLGEILQER 309
Q +Y L L E+
Sbjct: 438 QLNIYRTLKIHLTEK 452
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1
Length = 439
Score = 268 bits (685), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 199/321 (61%), Gaps = 18/321 (5%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
+NW+F T + + YG + + D F+ L+ +H I + LYI GFV F+
Sbjct: 111 INWYFLMTTLYYAYGESIYAYFHHLFIMDSFML----PLVLHHRFISFMLYIIGFVLFVA 166
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+LKK YK+QFSQ+ WTHM L++V QS F + ++FEG+FWF +P +V ND+ AY+ G
Sbjct: 167 SLKKGNYKFQFSQFCWTHMTLLLVVGQSHFMINNLFEGLFWFFVPVCYVVCNDVFAYLCG 226
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLAT---GWLH 178
FG+ PLI++SPKKT EGF+G + T+ +++ ++ F++ CP +DL+T L+
Sbjct: 227 KMFGKHPLIQVSPKKTVEGFLGGWICTVVIGSLISYVLMHFKYFICPTRDLSTSAFSGLN 286
Query: 179 CDPGPLFKPESFPLPG------WLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFK 232
C P +F P ++ +P LP + IT+ P+ +H F+S+IAPFGGFFASG K
Sbjct: 287 CTPNSVFLPHTYTIPAVFVDTFRLP-ETITLAPIYFHLAIFATFSSLIAPFGGFFASGLK 345
Query: 233 RAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTY 292
RAFKIKDFG SIPGHGG+TDRMDCQ + VF Y+Y QSFI +S V +L+ + +LT
Sbjct: 346 RAFKIKDFGASIPGHGGLTDRMDCQFLNGVFVYMYFQSFIAEKSTSVADLLDTAVYSLTT 405
Query: 293 EEQKALYMKLGEILQERLFGQ 313
+Q ++L E LQ L
Sbjct: 406 TQQ----VQLVEDLQNYLISH 422
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1
SV=1
Length = 444
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 194/315 (61%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L L KYH I + LY++GF F+L
Sbjct: 127 LSWYFLLCVNYFFYGETVTDYFFTLVQREEPL----RILSKYHRFISFALYLTGFCMFVL 182
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF + WTH+ L++V QS + ++FEG+ WF++P S ++ NDI AY+FG
Sbjct: 183 SLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFG 242
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG AT+ +L+ +M ++ CP D + +
Sbjct: 243 FFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVD 302
Query: 179 CDPGPLFKPESFPLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ + + +PG + WK + + P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 303 CEPSDLFRLQEYNIPGVIQSAIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRA 362
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F +Y SFI + +++Q LT L ++
Sbjct: 363 FKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI--RGPNPSKLIQQFLT-LRPDQ 419
Query: 295 QKALYMKLGEILQER 309
Q ++ L L ++
Sbjct: 420 QLHIFNTLKSHLTDK 434
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1
SV=1
Length = 445
Score = 263 bits (673), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 194/315 (61%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L L KYH I + LY++GF F+L
Sbjct: 128 LSWYFLLCVNYFFYGETVTDYFFTLVQREEPL----RILSKYHRFISFTLYLTGFCMFVL 183
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF + WTH+ L++V QS + ++FEG+ WF++P S ++ NDI AY+FG
Sbjct: 184 SLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFG 243
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG AT+ +L+ +M ++ CP D + +
Sbjct: 244 FFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVD 303
Query: 179 CDPGPLFKPESFPLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ + + +PG + WK + + P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 304 CEPSGLFRLQEYNIPGVIQSIIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRA 363
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F +Y SFI + +++Q LT L ++
Sbjct: 364 FKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI--RGPNPSKLVQQFLT-LRPDQ 420
Query: 295 QKALYMKLGEILQER 309
Q ++ L L ++
Sbjct: 421 QLHIFNTLKSHLTDK 435
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1
SV=1
Length = 445
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 193/315 (61%), Gaps = 14/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L L KYH I + LY+ GF F+L
Sbjct: 128 LSWYFLLCVNYFFYGETVTDYFFTLVQREEPL----RILSKYHRFISFTLYLIGFCMFVL 183
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF + WTH+ L++V QS + ++FEG+ WF++P S ++ NDI AY+FG
Sbjct: 184 SLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFG 243
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG AT+ +L+ +M ++ CP D + +
Sbjct: 244 FFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVD 303
Query: 179 CDPGPLFKPESFPLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ + + +PG + WK + + P Q H++ L FAS+I PFGGFFASGFKRA
Sbjct: 304 CEPSDLFRLQEYNIPGVIQSVIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRA 363
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F +Y SFI + +++Q LT L ++
Sbjct: 364 FKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI--RGPNPSKLIQQFLT-LRPDQ 420
Query: 295 QKALYMKLGEILQER 309
Q ++ L L ++
Sbjct: 421 QLHIFNTLRSHLIDK 435
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2
PE=2 SV=1
Length = 443
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 193/315 (61%), Gaps = 15/315 (4%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F F YG ++ V ++ L L KYH I + LY++GF F+L
Sbjct: 127 LSWYFLLCVNYFFYGETVTDYFFTLVQREEPL----RILSKYHRFISFTLYLTGFCMFVL 182
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L KK Y+ QF + WTH+ L++V QS + ++FEG+ WF++P S ++ NDI AY+FG
Sbjct: 183 SLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFG 242
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATGWLH 178
FFFGRTPLIKLSPKKTWEGFIG AT+ +L+ +M ++ CP D + +
Sbjct: 243 FFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVD 302
Query: 179 CDPGPLFKPESFPLPGWLP----WKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+P LF+ + + +PG + WK + + P Q H+ L FAS+I PFGGFFASGFKRA
Sbjct: 303 CEPSDLFRLQEYNIPGVIQSLVGWKTMRMYPFQIHS-ALSTFASLIGPFGGFFASGFKRA 361
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FKIKDF ++IPGHGGI DR DCQ +MA F +Y SFI + +++Q LT L ++
Sbjct: 362 FKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI--RGPNPSKLIQQFLT-LRPDQ 418
Query: 295 QKALYMKLGEILQER 309
Q ++ L L ++
Sbjct: 419 QLHIFNTLKSHLTDK 433
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
OS=Drosophila melanogaster GN=CdsA PE=1 SV=2
Length = 447
Score = 258 bits (659), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/315 (46%), Positives = 196/315 (62%), Gaps = 16/315 (5%)
Query: 2 LNWHFFFTAMLFVYGRILSQR---LVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVW 58
L+W+F T+ F YG L ++N V KFL + YH + + LYI GFVW
Sbjct: 142 LSWYFLLTSNYFFYGENLVDYFGVVINRVEYLKFL-------VTYHRFLSFALYIIGFVW 194
Query: 59 FILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAY 118
F+L+L KK Y QFS +AWTH+ L++V QS + +IFEG+ WF++P S+IV ND+ AY
Sbjct: 195 FVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVCNDVMAY 254
Query: 119 IFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP---RKDLATG 175
+FGFFFGRTPLIKLSPKKTWEGFIG AT+ + + ++ +Q+ CP ++
Sbjct: 255 VFGFFFGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRM 314
Query: 176 WLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAF 235
+ C P LF P+ + L + K + + P WH++ L LF+SII PFGGFFASGFKRAF
Sbjct: 315 TMSCVPSYLFTPQEYSLKLFGIGKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAF 374
Query: 236 KIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEEQ 295
KIKDFGD IPGHGGI DR DCQ +MA F +Y SFI S +L QI L ++Q
Sbjct: 375 KIKDFGDMIPGHGGIMDRFDCQFLMATFVNVYISSFIRTPS--PAKLLTQIYN-LKPDQQ 431
Query: 296 KALYMKLGEILQERL 310
+Y L + L + L
Sbjct: 432 YQIYQSLKDNLGDML 446
>sp|P38221|CDS1_YEAST Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1
Length = 457
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 189/300 (63%), Gaps = 11/300 (3%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
LNW+ FT + ++ G+ L + T + Y ++ ++ H ICY LY+ GFV F+
Sbjct: 121 LNWYLLFTTIYYLDGKSLFKFFQATF----YEYPVLNFIVTNHKFICYCLYLMGFVLFVC 176
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L+K K+QF THM+L++V Q+ + ++ G+FWFLLP L+++NDI AY+ G
Sbjct: 177 SLRKGFLKFQFGSLCVTHMVLLLVVFQAHLIIKNVLNGLFWFLLPCGLVIVNDIFAYLCG 236
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGW---LH 178
FG+T LI++SPKKT EGF+GA T ++ +L I+ + +LTCP +DL T + L
Sbjct: 237 ITFGKTKLIEISPKKTLEGFLGAWFFTALASIILTRILSPYTYLTCPVEDLHTNFFSNLT 296
Query: 179 CDPGPLFKPESFPLP----GWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRA 234
C+ P+F P+ + LP + IT+ P+ +HAL L FAS+ APFGGFFASG KR
Sbjct: 297 CELNPVFLPQVYRLPPIFFDKVQINSITVKPIYFHALNLATFASLFAPFGGFFASGLKRT 356
Query: 235 FKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMILEQILTALTYEE 294
FK+KDFG SIPGHGGITDR+DCQ +M FA +Y+++FI V+ +L IL L ++
Sbjct: 357 FKVKDFGHSIPGHGGITDRVDCQFIMGSFANLYYETFISEHRITVDTVLSTILMNLNDKQ 416
>sp|P53439|CDSA_CAEEL Probable phosphatidate cytidylyltransferase OS=Caenorhabditis
elegans GN=C33H5.18 PE=2 SV=1
Length = 455
Score = 245 bits (625), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 198/316 (62%), Gaps = 17/316 (5%)
Query: 2 LNWHFFFTAMLFVYGRILSQRLVNTVTSDKFLYQFVSSLIKYHMVICYFLYISGFVWFIL 61
L+W+F T+ F +G L + D FL+ L+ YH ++ + LY GFV F+L
Sbjct: 144 LSWYFLLTSNYFFFGESLIDYWGIVLKKDNFLH----FLVAYHRLVSFALYCIGFVSFVL 199
Query: 62 TLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFG 121
+L+K Y QFS +AWTH+ L+++ +QS F + +IF+G+ WFL P ++I+ DI +Y+FG
Sbjct: 200 SLRKGYYMRQFSLFAWTHLTLLLIVSQSFFIIQNIFQGLIWFLAPVAMIICCDIMSYMFG 259
Query: 122 FFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDP 181
FF+G+TPLIKLSPKKTWEGFIG + +T+ +L+ + + CP + T +C
Sbjct: 260 FFWGKTPLIKLSPKKTWEGFIGGAFSTVVFGILLSLALYNRPFFVCPVQHYQTDSSNCTI 319
Query: 182 GPLFKPESFPLPGWLPW------KE--ITILPVQWHALCLGLFASIIAPFGGFFASGFKR 233
F+ + +P+P + KE I + P +H++ L LFASI+ PFGGFFASGFKR
Sbjct: 320 PLAFQLQDYPVPRPFSFVYKILRKEPIIQLCPFVFHSIALSLFASILGPFGGFFASGFKR 379
Query: 234 AFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFI-VPQSFRVEMILEQILTALTY 292
AFKIKDFGD IPGHGG+ DR DCQ++M F +Y SFI VP + + +L+QI+T L
Sbjct: 380 AFKIKDFGDVIPGHGGLMDRFDCQLLMGTFVMVYIHSFIRVPDASK---LLKQIMT-LEP 435
Query: 293 EEQKALYMKLGEILQE 308
++Q ++ L L +
Sbjct: 436 QDQLNIFNLLQSELSK 451
>sp|Q55D90|CDSA_DICDI Probable phosphatidate cytidylyltransferase OS=Dictyostelium
discoideum GN=cdsA PE=3 SV=1
Length = 479
Score = 244 bits (624), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/284 (45%), Positives = 184/284 (64%), Gaps = 20/284 (7%)
Query: 41 IKYHMVICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGI 100
++YH+ + LY GFV FILTL+K +Y+YQFSQ WT MIL++V QS+F +++I++G+
Sbjct: 191 VRYHLWHSFSLYCIGFVLFILTLRKGVYRYQFSQLTWTLMILMMVVVQSNFLISNIYQGL 250
Query: 101 FWFLLPASLIVINDIAAYIFGFFFGRT----PLIKLSPKKTWEGFIGASVATITSAFVLA 156
WF+LP S+IV NDI AY GFF G+ PL+K+SP KTWEGFIGA+ T+ A+
Sbjct: 251 IWFILPVSIIVCNDIFAYFNGFFLGKKFINRPLMKISPNKTWEGFIGATGWTLLFAYYFC 310
Query: 157 NIMGRFQWLTCPRKDLATGW---LHCDPGPLFKPESFPLPGWL-----PWKEITILP--- 205
+ ++ W+ CP+ + TG+ LHC P+F + F P + + IT+LP
Sbjct: 311 GFLLKYDWIVCPKGN--TGFMESLHCTRDPVFLEKEFIFPPEITTIAFKYLGITLLPFTY 368
Query: 206 --VQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF 263
+Q+HAL L LF S+IAPFGGFFASG KRA+K+KDF PGHGG+TDR DCQ +M +F
Sbjct: 369 IPIQFHALVLALFGSLIAPFGGFFASGIKRAYKVKDFDTIFPGHGGVTDRTDCQFIMGLF 428
Query: 264 AYIYHQSFIVPQSFRVEMILEQILTALTYEEQKALYMKLGEILQ 307
++Y+ +FI I + I+ L+ EE+ +Y KL + ++
Sbjct: 429 IHVYYNTFIKTLEIDPTFIWQNIM-MLSMEEKMVIYEKLKQSIE 471
>sp|Q95ZE3|CDS1_ENCCU Phosphatidate cytidylyltransferase OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDS1 PE=3 SV=1
Length = 393
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 141/268 (52%), Gaps = 27/268 (10%)
Query: 47 ICYFLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFAQSSFTVASIFEGIFWFLLP 106
+C++ Y++ F+ F+ +L+K K Q +A H+ + + + ++ +G FWF+ P
Sbjct: 144 VCFYSYVAAFMCFVASLRKGRLKPQLGLFALIHLSTYTMAIAAKCAIFNLNKGRFWFVFP 203
Query: 107 ASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLT 166
A L++ NDI+AY+ G G+ PL +LSPKKT EGFIGA + T F L
Sbjct: 204 ALLVISNDISAYVVGKSIGKRPLYRLSPKKTLEGFIGAFIFTTAVGFAL----------- 252
Query: 167 CPRKDLATGWLHCDPGPLFKPESFPLPGWLPWK----EITILPVQWHALCLGLFASIIAP 222
G LH + G L +S ++ + + + + H + AS +AP
Sbjct: 253 --------GHLHVNSGFLRDADSEQFQKFMKFTVFGANVRVQSIYIHIIPFIFVASFVAP 304
Query: 223 FGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQSFRVEMI 282
F GF AS KRA+K KDFG++I GHGGI DRMDCQ+++A+FA Y SFI + V +
Sbjct: 305 FSGFLASALKRAYKKKDFGEAISGHGGIADRMDCQVLIAIFASTYISSFIYTEERSVGSV 364
Query: 283 LEQILTALTYEEQKALYMKLGEILQERL 310
I +++E M L E+L R+
Sbjct: 365 FSLICRNFSHDE----IMILIEMLNRRV 388
>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis
GN=cdsA PE=3 SV=1
Length = 306
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 46/159 (28%)
Query: 110 IVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLAN-IMGRFQWLTC 167
++ +D+ Y G FG+ P++ +SPKK+WEGF G+ V IT+ + A ++G+ W+
Sbjct: 186 VIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKTPWIGA 245
Query: 168 PRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFF 227
LG+ + G
Sbjct: 246 --------------------------------------------LLGVLFVLTTALGDLV 261
Query: 228 ASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYI 266
S KR IKD G +PGHGG+ DR+D + AV A+I
Sbjct: 262 ESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWI 300
>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1
Length = 306
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 46/159 (28%)
Query: 110 IVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLAN-IMGRFQWLTC 167
++ +D+ Y G FG+ P++ +SPKK+WEGF G+ V IT+ + A ++G+ W+
Sbjct: 186 VIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSLVCGITATIITATFLVGKTPWIGA 245
Query: 168 PRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFF 227
LG+ + G
Sbjct: 246 --------------------------------------------LLGVLFVLTTALGDLV 261
Query: 228 ASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYI 266
S KR IKD G +PGHGG+ DR+D + AV A+I
Sbjct: 262 ESQVKRDLGIKDMGRLLPGHGGLMDRLDGILPSAVAAWI 300
>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=cdsA PE=3 SV=1
Length = 395
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 103 FLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRF 162
FLL A + V D AY+FG FG+ PLIK+SP KTWEG T+ + ++ +
Sbjct: 205 FLLIA-IGVCTDTFAYLFGKRFGKNPLIKISPSKTWEGAFFGVTGTVLTISIICVLYSIP 263
Query: 163 QWLTCPR-KDLATGWLHCDPGPLFKPESFPLPGWLPWKEI-------TILPVQWHALCLG 214
++ P KD + L P+++ + + + + + W L
Sbjct: 264 NYVRQPSIKDASKTALQT-------PQNYDVHNLITNVFLISFISGGSTFYIYWWVSTLA 316
Query: 215 LF--ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYH 268
L ASI A G F S KR KIKDF + HGGI DR D + F +IYH
Sbjct: 317 LIFTASIFAIGGDLFFSYIKRLTKIKDFSKLLGKHGGILDRFDSSSFLISFFFIYH 372
>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA
PE=3 SV=2
Length = 285
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 47/162 (29%)
Query: 97 FEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIG--ASVATITSAF 153
+ G W L L+ D AY+FG FG+ L K+SP KTW+GFIG A+ A I+ +
Sbjct: 148 YSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGY 207
Query: 154 VLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCL 213
+ W + + PV L
Sbjct: 208 GM------------------------------------------WANLDVAPVT--LLIC 223
Query: 214 GLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMD 255
+ A++ + G S FKR IKD G IPGHGGI DR+D
Sbjct: 224 SIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12)
GN=cdsA PE=1 SV=2
Length = 285
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 47/162 (29%)
Query: 97 FEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIG--ASVATITSAF 153
+ G W L L+ D AY+FG FG+ L K+SP KTW+GFIG A+ A I+ +
Sbjct: 148 YSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGY 207
Query: 154 VLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCL 213
+ W + + PV L
Sbjct: 208 GM------------------------------------------WANLDVAPVT--LLIC 223
Query: 214 GLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMD 255
+ A++ + G S FKR IKD G IPGHGGI DR+D
Sbjct: 224 SIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7
GN=cdsA PE=3 SV=2
Length = 285
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 47/162 (29%)
Query: 97 FEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIG--ASVATITSAF 153
+ G W L L+ D AY+FG FG+ L K+SP KTW+GFIG A+ A I+ +
Sbjct: 148 YSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGY 207
Query: 154 VLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCL 213
+ W + + PV L
Sbjct: 208 GM------------------------------------------WANLDVAPVT--LLIC 223
Query: 214 GLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMD 255
+ A++ + G S FKR IKD G IPGHGGI DR+D
Sbjct: 224 SIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|Q9CBU1|CDSA_MYCLE Phosphatidate cytidylyltransferase OS=Mycobacterium leprae (strain
TN) GN=cdsA PE=3 SV=1
Length = 312
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 44/157 (28%)
Query: 110 IVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCP 168
+V +D+ Y G FG+ PL+ ++SP K+WEGF G+ V T+ + A
Sbjct: 192 VVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTATF---------- 241
Query: 169 RKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFA 228
L G PW L + G
Sbjct: 242 -----------------------LAGKTPWV----------GALLSFVLVLTCTLGDLVE 268
Query: 229 SGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAY 265
S KR IKD G +PGHGG+ DR+D + AV A+
Sbjct: 269 SQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAW 305
>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
J99) GN=cdsA PE=3 SV=1
Length = 266
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 48/160 (30%)
Query: 100 IFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEG-FIGASVATITSAFVLANI 158
I W L+ ++V +D+ A+ G G+TP SP KT EG IG +A++ +FV
Sbjct: 129 IIWLLV---VVVASDVGAFFGGKLLGKTPFTATSPNKTLEGALIGVVLASVLGSFV---G 182
Query: 159 MGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFAS 218
MG+ L+ G+L AL +
Sbjct: 183 MGK----------LSGGFLM-------------------------------ALLFSFLIA 201
Query: 219 IIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
++A FG + S KR +KD G +PGHGG+ DR+D +
Sbjct: 202 LMAVFGDLYESYLKRKVGVKDSGKILPGHGGVLDRLDSML 241
>sp|Q4L5W3|CDSA_STAHJ Phosphatidate cytidylyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=cdsA PE=3 SV=1
Length = 260
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 66/162 (40%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
+G+ + L ++ + D AYIFG G+ L +SP KT EGFIG + ++ V+
Sbjct: 128 DGLHYILYAFLVVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPIVM- 186
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
LF + F L WL L + +
Sbjct: 187 ---------------------------LFFVD-FNLNIWL-------------LLLVTII 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
SI G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSIFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q8CST9|CDSA_STAES Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cdsA PE=3 SV=1
Length = 260
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AYIFG G+ L +SP KT EGF G + +I V+
Sbjct: 128 EGLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQ 187
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
+ LH + W L + +
Sbjct: 188 MFVD----------------LHMNI--------------------------WLLLLVTIV 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSMFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q5HPT0|CDSA_STAEQ Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cdsA PE=3 SV=1
Length = 260
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AYIFG G+ L +SP KT EGF G + +I V+
Sbjct: 128 EGLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQ 187
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
+ LH + W L + +
Sbjct: 188 MFVD----------------LHMNI--------------------------WLLLLVTIV 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSMFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cdsA PE=3 SV=1
Length = 293
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 59/154 (38%), Gaps = 46/154 (29%)
Query: 114 DIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGR--FQWLTCPRKD 171
DI AYI G + GRT L +SPKKT EG + +L ++G QW
Sbjct: 171 DIGAYIMGKWLGRTRLSDISPKKTVEGSLWG-----VGGSLLVGVLGAWYLQW------- 218
Query: 172 LATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGF 231
P+ EIT LGL I++ G S
Sbjct: 219 -------------------------PYWEIT-------GALLGLLIGIVSLLGDLTESMM 246
Query: 232 KRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAY 265
KR +KD G IPGHGGI DR D + A Y
Sbjct: 247 KRDAGVKDSGQLIPGHGGILDRTDSYVFTAPLVY 280
>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=cdsA PE=3 SV=1
Length = 266
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 50/161 (31%)
Query: 100 IFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEG-FIGASVATITSAFV-LAN 157
I W L+ ++V +D+ A+ G G+TP SP KT EG IG +A++ +FV +
Sbjct: 129 IIWLLV---VVVASDVGAFFGGKLLGKTPFTPTSPNKTLEGALIGVVLASVLGSFVGMGK 185
Query: 158 IMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFA 217
+ G F + AL
Sbjct: 186 LSGGF---------------------------------------------FMALFFSFLI 200
Query: 218 SIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
+++A FG + S KR IKD G +PGHGG+ DR+D +
Sbjct: 201 ALVAVFGDLYESYLKRKVGIKDSGKILPGHGGVLDRLDSML 241
>sp|Q7A121|CDSA_STAAW Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MW2) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q6G9V2|CDSA_STAAS Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q6GHH4|CDSA_STAAR Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q7A5Y4|CDSA_STAAN Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
N315) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q99UL1|CDSA_STAAM Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|Q5HGH0|CDSA_STAAC Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
COL) GN=cdsA PE=3 SV=1
Length = 260
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 43/162 (26%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLA 156
EG+ + L ++ + D AY+FG G+ L +SP KT EGFIG
Sbjct: 128 EGLHYILYAFLIVWLTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIG------------- 174
Query: 157 NIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLF 216
G F L P L + + W L + L
Sbjct: 175 ---GLFCSLIVPLAMLYFVDFNMN--------------------------VWILLGVTLI 205
Query: 217 ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 206 LSLFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
>sp|P76091|YNBB_ECOLI Uncharacterized protein YnbB OS=Escherichia coli (strain K12)
GN=ynbB PE=3 SV=1
Length = 298
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 44/144 (30%)
Query: 113 NDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKD 171
NDIA Y++G GR ++ K+SP KT EG +G + + ++ ++
Sbjct: 180 NDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMIASLII---------------- 223
Query: 172 LATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGF 231
GPL P + AL GL I G S
Sbjct: 224 ----------GPLLTPLN-----------------TLQALLAGLLIGISGFCGDVVMSAI 256
Query: 232 KRAFKIKDFGDSIPGHGGITDRMD 255
KR +KD G +PGHGG+ DR+D
Sbjct: 257 KRDIGVKDSGKLLPGHGGLLDRID 280
>sp|O67292|CDSA_AQUAE Phosphatidate cytidylyltransferase OS=Aquifex aeolicus (strain VF5)
GN=cdsA PE=3 SV=1
Length = 259
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 60/151 (39%), Gaps = 48/151 (31%)
Query: 112 INDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRK 170
IND+ AY G FG+TPL K+SPKKT EGF+G
Sbjct: 140 INDVFAYYIGKNFGKTPLFPKISPKKTVEGFLG--------------------------- 172
Query: 171 DLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASG 230
G LF F L LP+ + ++ LG F + G +F S
Sbjct: 173 -----------GVLFGSLFFALT--LPYGIL-------NSFLLGTFVLTVGVAGDYFKSF 212
Query: 231 FKRAFKIKDFGDSIPGHGGITDRMDCQMVMA 261
KR IKDF + HGG TDR D + A
Sbjct: 213 IKRQVGIKDFSNVFGEHGGFTDRFDALVFSA 243
>sp|Q49433|CDSA_MYCGE Putative phosphatidate cytidylyltransferase OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=cdsA PE=3 SV=1
Length = 305
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 95 SIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFV 154
S+ G L SL V D ++FG FG+ PLIK+SP KTWEG ++TI +
Sbjct: 102 SVIRGWTTIFLLMSLAVSVDTFPFLFGKRFGKNPLIKISPSKTWEGAFFGIISTIVVVAL 161
Query: 155 LANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILP--------- 205
L + ++ P + G L P+++ + I ++
Sbjct: 162 LCVLYSIPFFVAKPTFNQTNGI------ALNTPQNYDSHNLI--TNIFLIAFISGGSSFY 213
Query: 206 VQWHALCLGLF--ASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF 263
+ W L L S+ A G F S KR IKDF + HGG+ DR D + F
Sbjct: 214 IYWWVSTLALIFTGSVFAIGGDLFFSYIKRLISIKDFSKVLGKHGGVLDRFDSSSFLISF 273
Query: 264 AYIYH 268
++YH
Sbjct: 274 FFVYH 278
>sp|O31752|CDSA_BACSU Phosphatidate cytidylyltransferase OS=Bacillus subtilis (strain
168) GN=cdsA PE=3 SV=1
Length = 269
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 59/154 (38%), Gaps = 43/154 (27%)
Query: 113 NDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKD 171
D AY G G+ L ++SP KT EGF G I A VLA I
Sbjct: 151 TDSGAYFVGKSLGKRKLWPEISPNKTVEGFAGG----IVIALVLATI------------- 193
Query: 172 LATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGF 231
F L LP I + L + LF S+ G S
Sbjct: 194 ------------------FQLVAQLPIPYI-------YLLLITLFLSVFGQLGDLVESAL 228
Query: 232 KRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAY 265
KR + +KD G+ +PGHGGI DR D + + F Y
Sbjct: 229 KRHYDVKDSGNILPGHGGILDRFDSFLFVMPFLY 262
>sp|Q9X1B7|CDSA_THEMA Phosphatidate cytidylyltransferase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cdsA PE=3
SV=1
Length = 270
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 38/154 (24%)
Query: 114 DIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDL 172
D AY G FGRT + + SP+K+ EG IG + + F+ ++
Sbjct: 144 DSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRLVVN------------ 191
Query: 173 ATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFK 232
L +LP+ +I+ FG F S K
Sbjct: 192 ----------DLLSVNVISFRTFLPFAAT---------------VAIMDTFGDIFESALK 226
Query: 233 RAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYI 266
R + +KD G ++PGHGG+ DR+D + +A +YI
Sbjct: 227 RHYGVKDSGKTLPGHGGMLDRIDGLLFVAPVSYI 260
>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3
SV=1
Length = 288
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 97 FEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVL 155
+ G+F L L+ D AY G FG+ L K+SP K+WEG IG + +A VL
Sbjct: 150 YHGLFLLLYVFILVWAADSGAYFSGRAFGKRKLAPKVSPGKSWEGVIGG----LITALVL 205
Query: 156 ANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGL 215
A I F T TG++ IL V A
Sbjct: 206 AFIFIHFSNNTLVGDRNITGFI-------------------------ILSVATVA----- 235
Query: 216 FASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDC-QMVMAVFAYIY 267
I+ G S FKR +KD IPGHGG+ DR+D + F+Y Y
Sbjct: 236 ----ISVLGDLTESMFKRESGVKDSSQLIPGHGGVLDRIDSLTAAVPFFSYFY 284
>sp|Q68WV5|CDSA_RICTY Phosphatidate cytidylyltransferase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=cdsA PE=3 SV=1
Length = 228
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 37/149 (24%)
Query: 114 DIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDL 172
D A I G F T L K+SPKKTW G I +++ A +++ I
Sbjct: 106 DTFAMIGGKTFKGTKLAPKISPKKTWTGLIIGTISAGLIAVLVSLI-------------- 151
Query: 173 ATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFK 232
P + E++ + + + ++IA F S FK
Sbjct: 152 ----------PYYHIENYYFSN------------KIYLFIISCILALIAQSSDLFISYFK 189
Query: 233 RAFKIKDFGDSIPGHGGITDRMDCQMVMA 261
R F IKD G IPGHGG+ DR D ++ A
Sbjct: 190 RKFNIKDSGHIIPGHGGVLDRFDSIILTA 218
>sp|Q1RII7|CDSA_RICBR Phosphatidate cytidylyltransferase OS=Rickettsia bellii (strain
RML369-C) GN=cdsA PE=3 SV=1
Length = 231
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 60/149 (40%), Gaps = 37/149 (24%)
Query: 114 DIAAYIFGFFFGRTPLI-KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDL 172
DI A I G G L K+SPKKTW G I I SA ++A ++
Sbjct: 108 DIFAMIGGKTLGGAKLAPKISPKKTWSGLITG----ILSAGLVATLISFI---------- 153
Query: 173 ATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFK 232
P F E++ + + + ++ A F S FK
Sbjct: 154 ----------PSFYIENYYFSN------------RIYLFIISCTLALTAQLSDLFISYFK 191
Query: 233 RAFKIKDFGDSIPGHGGITDRMDCQMVMA 261
R F IKD G+ IPGHGG+ DR D ++ A
Sbjct: 192 RKFNIKDSGNIIPGHGGVLDRFDSIILTA 220
>sp|Q92I31|CDSA_RICCN Phosphatidate cytidylyltransferase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=cdsA PE=3 SV=1
Length = 230
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 36/125 (28%)
Query: 131 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 190
KLSPKKTW G + ++ A +++ I P F E++
Sbjct: 126 KLSPKKTWSGLVTGVLSAGLVAVLVSFI------------------------PNFHIENY 161
Query: 191 PLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI 250
+ + + ++IA F S FKR F IKD G IPGHGG+
Sbjct: 162 YFSN------------KIYLFIISCILALIAQLSDLFISYFKRKFNIKDSGHIIPGHGGV 209
Query: 251 TDRMD 255
DR D
Sbjct: 210 LDRFD 214
>sp|Q9ZDA8|CDSA_RICPR Phosphatidate cytidylyltransferase OS=Rickettsia prowazekii (strain
Madrid E) GN=cdsA PE=3 SV=1
Length = 228
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 36/131 (27%)
Query: 131 KLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESF 190
K+SPKKTW G I +V+ + +++ I P + E +
Sbjct: 124 KISPKKTWTGLITGTVSAGLVSVLVSLI------------------------PNYHIEHY 159
Query: 191 PLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGI 250
+ + + ++IA F S FKR F IKD G IPGHGG+
Sbjct: 160 YFSN------------KIYLFIISCILALIAQSSDLFISYFKRKFNIKDSGHIIPGHGGV 207
Query: 251 TDRMDCQMVMA 261
DR D ++ A
Sbjct: 208 LDRFDSIILTA 218
>sp|Q49X46|CDSA_STAS1 Phosphatidate cytidylyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=cdsA PE=3 SV=1
Length = 260
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 218 SIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQM 258
S+ G SGFKR F +KD G +PGHGGI DR D M
Sbjct: 207 SMFGQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDSFM 247
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 98 EGIFWFLLPASLIVINDIAAYIFGFFFGRTPL-IKLSPKKTWEGFIGASVATITSAFVL 155
EG+ + L ++ + D AYIFG G+ L +SP KT EGF+G + ++ V+
Sbjct: 128 EGLHYILFAFLVVWLTDTGAYIFGRLMGKHKLWPVISPNKTVEGFVGGLICSLIVPLVM 186
>sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=cdsA PE=3 SV=2
Length = 270
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%)
Query: 205 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFA 264
P W L L SI++ G S KR F KD G +PGHGG+ DR+D + A
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVDGLVAAAALL 250
Query: 265 YIYHQSFIVPQ 275
Y++ F P
Sbjct: 251 YLFGAIFAEPD 261
>sp|P0C102|CDSA_BRUAB Phosphatidate cytidylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=cdsA PE=3 SV=1
Length = 270
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%)
Query: 205 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFA 264
P W L L SI++ G S KR F KD G +PGHGG+ DR+D + A
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVDGLVAAAALL 250
Query: 265 YIYHQSFIVPQ 275
Y++ F P
Sbjct: 251 YLFGAIFAEPD 261
>sp|Q2YRP9|CDSA_BRUA2 Phosphatidate cytidylyltransferase OS=Brucella abortus (strain
2308) GN=cdsA PE=3 SV=1
Length = 270
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%)
Query: 205 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFA 264
P W L L SI++ G S KR F KD G +PGHGG+ DR+D + A
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVDGLVAAAALL 250
Query: 265 YIYHQSFIVPQ 275
Y++ F P
Sbjct: 251 YLFGAIFAEPD 261
>sp|Q8G0E0|CDSA_BRUSU Phosphatidate cytidylyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=cdsA PE=3 SV=1
Length = 270
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%)
Query: 205 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFA 264
P W L L SI++ G S KR F KD G +PGHGG+ DR+D + A
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVDGLVAAAALL 250
Query: 265 YIYHQSFIVPQ 275
Y++ F P
Sbjct: 251 YLFGAIFAEPD 261
>sp|Q4ULR7|CDSA_RICFE Phosphatidate cytidylyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=cdsA PE=3 SV=1
Length = 227
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 218 SIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMA 261
++IA F S KR F IKD G IPGHGG+ DR D ++ A
Sbjct: 175 ALIAQSSDLFISYLKRKFNIKDSGHIIPGHGGVLDRFDSIILTA 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.144 0.475
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,574,010
Number of Sequences: 539616
Number of extensions: 4692708
Number of successful extensions: 11778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 11614
Number of HSP's gapped (non-prelim): 113
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)