Query 021290
Match_columns 314
No_of_seqs 186 out of 577
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 15:31:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 3E-124 1E-128 901.3 26.5 265 46-310 25-292 (379)
2 3mbd_A Fructose-bisphosphate a 100.0 1E-123 4E-128 888.4 23.8 263 46-310 5-268 (342)
3 3bv4_A Fructose-bisphosphate a 100.0 3E-121 1E-125 873.5 27.1 262 49-310 6-269 (341)
4 3mmt_A Fructose-bisphosphate a 100.0 1E-121 5E-126 875.8 23.7 260 50-310 4-269 (347)
5 2qap_A Fructose-1,6-bisphospha 100.0 2E-120 7E-125 878.8 26.7 267 44-310 34-302 (391)
6 2pc4_A 41 kDa antigen, fructos 100.0 3E-120 9E-125 873.5 25.7 264 47-310 14-280 (369)
7 2iqt_A Fructose-bisphosphate a 100.0 2.3E-92 7.8E-97 664.2 16.7 223 58-310 7-241 (296)
8 3bil_A Probable LACI-family tr 75.5 44 0.0015 29.7 14.1 164 110-298 121-311 (348)
9 3iv3_A Tagatose 1,6-diphosphat 75.5 23 0.00077 33.8 11.0 174 69-270 26-211 (332)
10 3b8i_A PA4872 oxaloacetate dec 57.3 22 0.00075 33.1 6.8 163 52-258 67-253 (287)
11 2xw6_A MGS, methylglyoxal synt 55.5 21 0.00071 29.9 5.7 82 49-140 12-105 (134)
12 1r88_A MPT51/MPB51 antigen; AL 41.5 63 0.0021 27.8 6.8 54 201-258 224-277 (280)
13 2yvq_A Carbamoyl-phosphate syn 39.4 37 0.0013 27.8 4.7 73 49-130 33-115 (143)
14 1b93_A Protein (methylglyoxal 39.2 24 0.00083 30.1 3.7 90 41-140 13-113 (152)
15 1vmd_A MGS, methylglyoxal synt 36.6 41 0.0014 29.6 4.8 91 41-141 29-130 (178)
16 3qk7_A Transcriptional regulat 33.6 2.2E+02 0.0076 24.1 11.7 165 110-298 64-258 (294)
17 3sy1_A UPF0001 protein YGGS; e 30.4 2.1E+02 0.0072 25.4 8.6 102 127-239 104-212 (245)
18 3h5o_A Transcriptional regulat 29.4 2.8E+02 0.0097 24.1 15.3 165 109-297 116-308 (339)
19 4do4_A Alpha-N-acetylgalactosa 28.3 68 0.0023 29.6 5.1 55 130-188 86-140 (400)
20 1ydo_A HMG-COA lyase; TIM-barr 28.0 2E+02 0.0069 26.3 8.2 81 196-300 115-201 (307)
21 3k0z_A Putative polyketide cyc 27.7 1.2E+02 0.0041 24.2 5.9 77 222-300 15-92 (159)
22 3m0m_A L-rhamnose isomerase; b 26.9 87 0.003 30.7 5.8 61 159-232 73-134 (438)
23 2hsg_A Glucose-resistance amyl 26.6 3.1E+02 0.011 23.7 11.2 165 109-297 114-308 (332)
24 3lye_A Oxaloacetate acetyl hyd 25.7 90 0.0031 29.3 5.4 80 164-260 175-271 (307)
25 3egc_A Putative ribose operon 25.1 3E+02 0.01 23.0 10.1 165 109-297 62-255 (291)
26 3l49_A ABC sugar (ribose) tran 24.7 1.7E+02 0.0058 24.5 6.6 168 110-297 60-262 (291)
27 1xg4_A Probable methylisocitra 24.3 1E+02 0.0034 28.7 5.4 32 162-199 162-193 (295)
28 1dp7_P MHC class II transcript 24.2 44 0.0015 25.5 2.5 19 205-223 20-38 (76)
29 3o74_A Fructose transport syst 23.0 3.1E+02 0.011 22.4 8.8 164 110-298 57-249 (272)
30 3tva_A Xylose isomerase domain 22.0 2.5E+02 0.0086 23.9 7.2 73 164-245 99-173 (290)
31 3ih1_A Methylisocitrate lyase; 22.0 79 0.0027 29.6 4.2 80 163-260 171-267 (305)
32 1i60_A IOLI protein; beta barr 21.8 3.5E+02 0.012 22.5 8.1 78 165-246 82-164 (278)
33 1zlp_A PSR132, petal death pro 21.6 75 0.0026 30.0 4.0 79 163-259 185-280 (318)
34 3gwq_A D-serine deaminase; str 20.8 1.7E+02 0.0059 27.8 6.5 93 141-241 167-260 (426)
35 2b8n_A Glycerate kinase, putat 20.8 4.2E+02 0.014 26.2 9.2 91 204-310 263-360 (429)
36 1dqz_A 85C, protein (antigen 8 20.4 2.8E+02 0.0096 23.3 7.1 52 200-255 228-279 (280)
37 2ze3_A DFA0005; organic waste 20.0 90 0.0031 28.7 4.1 75 164-258 165-254 (275)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=2.9e-124 Score=901.30 Aligned_cols=265 Identities=54% Similarity=0.880 Sum_probs=260.5
Q ss_pred ccccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCCCCCceeEEeecccccccc
Q 021290 46 IRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQS 125 (314)
Q Consensus 46 ~~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~l~~~IsGvILfeETl~q~ 125 (314)
.+.++|++||++||++|++|||||||+|||+|||+|||++|||||||+|||+||+||||||+|++||||||||||||||+
T Consensus 25 ~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLftsp~~~~~IsGvILFeETl~Qk 104 (379)
T 3kx6_A 25 KLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQQ 104 (379)
T ss_dssp SCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTCB
T ss_pred hcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcCcccccceeEEEcchhhcccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC-C--CcCHHHHH
Q 021290 126 TTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-N--GPSALAVR 202 (314)
Q Consensus 126 ~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~-~--~Ps~~aI~ 202 (314)
++||+||+|+|+++|||||||||||++||+|++||++|||||||++||++||++|||||||||||+|. + .||.++|.
T Consensus 105 ~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~aI~ 184 (379)
T 3kx6_A 105 APNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSIL 184 (379)
T ss_dssp CTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHHH
T ss_pred ccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999995 4 59999999
Q ss_pred HHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCC
Q 021290 203 EAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKAT 282 (314)
Q Consensus 203 ~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s 282 (314)
+|++.|||||+|||++||||||||||||||||||+||++|||+||++||++|++|||||||||||||||+||++|+.|++
T Consensus 185 ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k~s 264 (379)
T 3kx6_A 185 ETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKPA 264 (379)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCCC
T ss_pred HHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccCCCCCCceEEeec
Q 021290 283 PQQVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 283 ~eeVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
|||||++||++|+||||++||||+|||-
T Consensus 265 ~eeVA~aTv~~L~rtVP~avpGI~FLSG 292 (379)
T 3kx6_A 265 PQTVGFLTSRALRRTVPPALPGVMFLSG 292 (379)
T ss_dssp HHHHHHHHHHHHHTTCCTTSCEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCcccCcceecCC
Confidence 9999999999999999999999999994
No 2
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=1.3e-123 Score=888.40 Aligned_cols=263 Identities=38% Similarity=0.614 Sum_probs=257.5
Q ss_pred ccccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCCCCCceeEEeecccccccc
Q 021290 46 IRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQS 125 (314)
Q Consensus 46 ~~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~l~~~IsGvILfeETl~q~ 125 (314)
++..+|++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||+|++||||||||||||||+
T Consensus 5 ~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILfeETl~qk 84 (342)
T 3mbd_A 5 MMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQT 84 (342)
T ss_dssp -CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGCB
T ss_pred cCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcCcccccceeEEEcchhhcccc
Confidence 34468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC-CCcCHHHHHHH
Q 021290 126 TTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-NGPSALAVREA 204 (314)
Q Consensus 126 ~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~-~~Ps~~aI~~n 204 (314)
++||+||+|+|+++|||||||||||++|| ++||++|||||||++||++||++|||||||||||+|. +.||.++|.+|
T Consensus 85 ~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~en 162 (342)
T 3mbd_A 85 SGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINEN 162 (342)
T ss_dssp CTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHHH
T ss_pred ccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHHHH
Confidence 99999999999999999999999999999 7899999999999999999999999999999999995 56999999999
Q ss_pred HHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCChH
Q 021290 205 AWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQ 284 (314)
Q Consensus 205 a~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~e 284 (314)
++.|||||+|||++||||||||||||||||||+||++|||+||++||++|++|||||||||||||||+||++|+.++|||
T Consensus 163 a~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s~e 242 (342)
T 3mbd_A 163 CSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPK 242 (342)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCCHH
T ss_pred HHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCceEEeec
Q 021290 285 QVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 285 eVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
|||++||++|+||||++||||+|||-
T Consensus 243 eVA~~Tv~~L~rtVP~avpGI~FLSG 268 (342)
T 3mbd_A 243 KVATFTLRALLSTIPCGIPGIVFLSG 268 (342)
T ss_dssp HHHHHHHHHHHHHCCTTCCEEEECCT
T ss_pred HHHHHHHHHHHhcCCcccCcceecCC
Confidence 99999999999999999999999994
No 3
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=3.1e-121 Score=873.50 Aligned_cols=262 Identities=51% Similarity=0.780 Sum_probs=258.4
Q ss_pred cchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCC-CCCceeEEeecccccccccc
Q 021290 49 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTT 127 (314)
Q Consensus 49 ~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~-l~~~IsGvILfeETl~q~~~ 127 (314)
.+|++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||+ +++||||||||||||||+++
T Consensus 6 ~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~qk~~ 85 (341)
T 3bv4_A 6 PEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKAD 85 (341)
T ss_dssp HHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTCBCT
T ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhccccCc
Confidence 57999999999999999999999999999999999999999999999999999999999 59999999999999999999
Q ss_pred CCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC-CCcCHHHHHHHHH
Q 021290 128 DGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-NGPSALAVREAAW 206 (314)
Q Consensus 128 dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~-~~Ps~~aI~~na~ 206 (314)
||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|+ +.||.++|.+|++
T Consensus 86 dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~~na~ 165 (341)
T 3bv4_A 86 DGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENAN 165 (341)
T ss_dssp TSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHHHHH
T ss_pred CCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999995 6799999999999
Q ss_pred HHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCChHHH
Q 021290 207 GLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQV 286 (314)
Q Consensus 207 ~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~eeV 286 (314)
.|||||+|||++||||||||||||||||||++|++||++||+++|++|++|||||||||||||||+||++|+.++++|||
T Consensus 166 ~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~~e~v 245 (341)
T 3bv4_A 166 VLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEI 245 (341)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHHHH
T ss_pred HHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCceEEeec
Q 021290 287 AEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 287 A~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
|++||++|+|||||+||||+|||-
T Consensus 246 a~~Tv~~l~rtvP~aVpgI~fLSG 269 (341)
T 3bv4_A 246 AMATVTALRRTVPPAVTGVTFLSG 269 (341)
T ss_dssp HHHHHHHHHTTSCTTSCEEEECCT
T ss_pred HHHHHHHHhhcCCcccCeeeecCC
Confidence 999999999999999999999994
No 4
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=1.3e-121 Score=875.76 Aligned_cols=260 Identities=49% Similarity=0.770 Sum_probs=255.7
Q ss_pred chHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccC-CCCCCceeEEeeccccccccccC
Q 021290 50 SYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTA-PGLGQYISGAILFEETLYQSTTD 128 (314)
Q Consensus 50 ~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~tt-p~l~~~IsGvILfeETl~q~~~d 128 (314)
.+.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||| |+|++||||||||||||||+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 45589999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC--CCcCHHHHHHHHH
Q 021290 129 GKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP--NGPSALAVREAAW 206 (314)
Q Consensus 129 G~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~--~~Ps~~aI~~na~ 206 (314)
|+||+|+|+++|||||||||||++||+|++||++|||||||.+||++||++|||||||||||+|. +.||.++|.+|++
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999995 5699999999999
Q ss_pred HHHHHHHHHHhCCceeeecceecCCC---CcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCCh
Q 021290 207 GLARYAAIAQDNGLVPIVEPEILLDG---DHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATP 283 (314)
Q Consensus 207 ~LAryAaicQ~~GLVPIVEPEVl~dg---dH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~ 283 (314)
.|||||+|||++|||||||||||||| ||||++|++|||+||++||++|++|||||||||||||||+||++ +.|+||
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~-~~k~s~ 242 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKD-ARIASV 242 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTT-SCCCCH
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCC-CCcCCH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEeec
Q 021290 284 QQVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 284 eeVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
||||++||++|+||||++||||+|||-
T Consensus 243 eevA~~Tv~~L~rtVP~avpGI~FLSG 269 (347)
T 3mmt_A 243 EEVAEKTVHVLKQTVPAAVPGIAFLSG 269 (347)
T ss_dssp HHHHHHHHHHHHHHSCTTSCEEEECCT
T ss_pred HHHHHHHHHHHHhhCCcccCcceecCC
Confidence 999999999999999999999999994
No 5
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=2e-120 Score=878.77 Aligned_cols=267 Identities=47% Similarity=0.797 Sum_probs=261.7
Q ss_pred ccccccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCCCCCceeEEeecccccc
Q 021290 44 LTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLY 123 (314)
Q Consensus 44 ~~~~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~l~~~IsGvILfeETl~ 123 (314)
+.....+|++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++|||||||||||||
T Consensus 34 ~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILFeETl~ 113 (391)
T 2qap_A 34 YNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVG 113 (391)
T ss_dssp GCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecCCCccCceEEEEcchHhcc
Confidence 44456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcchHHHHHhCCceeeeecCCCcccCC-CCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC-CCcCHHHH
Q 021290 124 QSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-NGPSALAV 201 (314)
Q Consensus 124 q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~-g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~-~~Ps~~aI 201 (314)
|+++||+||+|+|+++|||||||||||++||+ |++||++|||||||++||++||++|||||||||||+|+ +.||.++|
T Consensus 114 Qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~PS~~aI 193 (391)
T 2qap_A 114 QKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAV 193 (391)
T ss_dssp CBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHH
T ss_pred CcCcCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCCCHHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999995 67999999
Q ss_pred HHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCC
Q 021290 202 REAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKA 281 (314)
Q Consensus 202 ~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~ 281 (314)
.+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|||+|||||||||||+||++|+.++
T Consensus 194 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~~~~k~ 273 (391)
T 2qap_A 194 RFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTA 273 (391)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCC
T ss_pred HHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhccCCCCCCceEEeec
Q 021290 282 TPQQVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 282 s~eeVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
+|||||++||++|+|||||+||||+|||-
T Consensus 274 s~eevA~~Tv~~L~rtVPpaVpgIvFLSG 302 (391)
T 2qap_A 274 APEQVAHYTVMTLARTMPAMLPGVMFLSG 302 (391)
T ss_dssp CHHHHHHHHHHHHHHHSBTTCCEEEECCT
T ss_pred CHHHHHHHHHHHHhhcCCCccCeeeeCCC
Confidence 99999999999999999999999999994
No 6
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=2.7e-120 Score=873.50 Aligned_cols=264 Identities=54% Similarity=0.848 Sum_probs=259.6
Q ss_pred cccchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCCCCCceeEEeeccccccccc
Q 021290 47 RAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST 126 (314)
Q Consensus 47 ~~~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~l~~~IsGvILfeETl~q~~ 126 (314)
...+|++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||++
T Consensus 14 ~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~tsp~~~~~IsGvILfeETl~qk~ 93 (369)
T 2pc4_A 14 LPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKN 93 (369)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTCBC
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccCCCcccceEEEEcchHhccCcC
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC---CCcCHHHHHH
Q 021290 127 TDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP---NGPSALAVRE 203 (314)
Q Consensus 127 ~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~---~~Ps~~aI~~ 203 (314)
+||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+|. +.||.++|.+
T Consensus 94 ~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~~PS~~aI~~ 173 (369)
T 2pc4_A 94 EAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHE 173 (369)
T ss_dssp TTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHHHH
T ss_pred cCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCCCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999995 5699999999
Q ss_pred HHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCCh
Q 021290 204 AAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATP 283 (314)
Q Consensus 204 na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~ 283 (314)
|++.|||||+|||++||||||||||||||||||++|++||++||+++|++|++|||+|||||||||||+||++|+.++||
T Consensus 174 na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~G~~~~~k~s~ 253 (369)
T 2pc4_A 174 TAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTT 253 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCH
T ss_pred HHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccccccccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCceEEeec
Q 021290 284 QQVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 284 eeVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
||||++||++|+|||||+||||+|||-
T Consensus 254 e~vA~~Tv~~L~rtvPpaVpgI~fLSG 280 (369)
T 2pc4_A 254 QDVGFLTVRTLRRTVPPALPGVVFLSG 280 (369)
T ss_dssp HHHHHHHHHHHHHHCCTTSCEEEECCT
T ss_pred HHHHHHHHHHHHhcCCccCCeeeeCCC
Confidence 999999999999999999999999994
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.3e-92 Score=664.19 Aligned_cols=223 Identities=25% Similarity=0.349 Sum_probs=210.8
Q ss_pred HHHHhcCCCCceEee-cCCCcchHHHhhhcCCCCChhh--------hhhhhhhcccCCCC-CCceeEEeecccccccccc
Q 021290 58 TAKTVASPGRGILAM-DESNATCGKRLASIGLENTEAN--------RQAYRTLLVTAPGL-GQYISGAILFEETLYQSTT 127 (314)
Q Consensus 58 tA~~i~a~GKGIlA~-DES~gt~~Krl~~iGvente~n--------r~~yR~ll~ttp~l-~~~IsGvILfeETl~q~~~ 127 (314)
...+.++|||||||+ |||+|||+|||++||||||||| ||+||+||||||+| ++||||||||||||||++
T Consensus 7 ~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~- 85 (296)
T 2iqt_A 7 EQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI- 85 (296)
T ss_dssp HHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE-
T ss_pred HHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC-
Confidence 445567789998855 9999999999999999999999 69999999999999 999999999999999985
Q ss_pred CCcchHHHH-HhCCceeeeecCCCcccCC-CCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHH
Q 021290 128 DGKKMVDVL-VEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAA 205 (314)
Q Consensus 128 dG~~~~~~L-~~kGIvPGIKVDkGl~pl~-g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na 205 (314)
||+||+++| +++|||||||||||++||+ |.++|++|||||||++||++||++| |||||||+|++ ..+|.+|+
T Consensus 86 dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~---~~aI~~na 159 (296)
T 2iqt_A 86 EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN---EQGIRDIV 159 (296)
T ss_dssp TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC---HHHHHHHH
T ss_pred CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc---hhHHHHHH
Confidence 999999999 6899999999999999999 8889999999999999999997665 99999999985 89999999
Q ss_pred HHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCChHH
Q 021290 206 WGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQ 285 (314)
Q Consensus 206 ~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~ee 285 (314)
+.|||||+|||++|||||||||||+||+ |+++|++||++||+++|++|++ ||+|||+| ||++| ++++
T Consensus 160 ~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~----~~~~ 226 (296)
T 2iqt_A 160 EQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN----FYKE 226 (296)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT----TTHH
T ss_pred HHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC----CHHh
Confidence 9999999999999999999999999999 9999999999999999999999 99999999 99998 6788
Q ss_pred HHHHHHHHhhccCCCCCCceEEeec
Q 021290 286 VAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 286 VA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
||+ ||+||||+|||-
T Consensus 227 va~----------ppaVpgVvfLSG 241 (296)
T 2iqt_A 227 IIE----------HPMMLRVVALSG 241 (296)
T ss_dssp HHT----------STTEEEEEEECT
T ss_pred hcC----------CCCCCeeeeCCC
Confidence 886 999999999994
No 8
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=75.52 E-value=44 Score=29.74 Aligned_cols=164 Identities=14% Similarity=0.120 Sum_probs=95.6
Q ss_pred CceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhH---HHHHHHHHhhCCCccccc
Q 021290 110 QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDG---LASRTAAYYQQGARFAKW 186 (314)
Q Consensus 110 ~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDg---L~~R~~~y~~~Ga~FAKW 186 (314)
+.+-|+|++.-... .+..+.|.+.| +|.|=+|..... ..+ ..+-+.|+ -..-+....+.|.
T Consensus 121 ~~vdgiI~~~~~~~------~~~~~~l~~~~-iPvV~i~~~~~~---~~~-~~~V~~D~~~~~~~a~~~L~~~G~----- 184 (348)
T 3bil_A 121 HGVDGIICVPNEEC------ANQLEDLQKQG-MPVVLVDRELPG---DST-IPTATSNPQPGIAAAVELLAHNNA----- 184 (348)
T ss_dssp TTCSCEEECCCGGG------HHHHHHHHHC--CCEEEESSCCSC---C-C-CCEEEEECHHHHHHHHHHHHHTTC-----
T ss_pred CCCCEEEEeCCCCC------hHHHHHHHhCC-CCEEEEcccCCC---CCC-CCEEEeChHHHHHHHHHHHHHCCC-----
Confidence 56788898753321 14556777777 577777764321 001 11222332 2222233345664
Q ss_pred ceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHH---------------HHH
Q 021290 187 RTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWA---------------EVF 251 (314)
Q Consensus 187 RsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~---------------~vf 251 (314)
|.+.-+...+.... ...-+.-|-..++++|+ +|++...++.+.+..++.+++.|. .++
T Consensus 185 ~~I~~i~~~~~~~~---~~~R~~Gf~~al~~~g~----~~~~v~~~~~~~~~~~~~~~~ll~~~~~ai~~~nD~~A~g~~ 257 (348)
T 3bil_A 185 LPIGYLSGPMDTST---GRERLEDFKAACANSKI----GEQLVFLGGYEQSVGFEGATKLLDQGAKTLFAGDSMMTIGVI 257 (348)
T ss_dssp CSEEEECCCTTSHH---HHHHHHHHHHHHHHTTC----CCCEEECCCSSHHHHHHHHHHHHHTTCSEEEESSHHHHHHHH
T ss_pred CeEEEEeCCCCCcc---HHHHHHHHHHHHHHcCc----CccEEEcCCCCHHHHHHHHHHHHcCCCCEEEEcChHHHHHHH
Confidence 44544543332222 22344556666889997 567667788898888888887775 368
Q ss_pred HHHHhCCccccc---------cccccccccCCCCCCCCCChHHHHHHHHHHhhccC
Q 021290 252 FYLAENNVMFEG---------ILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRI 298 (314)
Q Consensus 252 ~~L~~~~V~lEG---------~lLKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rtV 298 (314)
++|+++|+...+ +-+ ..++.|... +-...+++++...++.|.+.+
T Consensus 258 ~al~~~G~~vP~disvvG~D~~~~-~~~~~p~lt-tv~~~~~~~g~~Av~~l~~~i 311 (348)
T 3bil_A 258 EACHKAGLVIGKDVSVIGFDTHPL-FALQPHPLT-VIDQNVEQLAQRAVSILTELI 311 (348)
T ss_dssp HHHHHTTCCBTTTBEEEEESCCGG-GGGSSSCCC-EEECCHHHHHHHHHHHHHCC-
T ss_pred HHHHHcCCCCCCCeEEEEeCCcHH-HHhcCCCce-EEEcCHHHHHHHHHHHHHHHh
Confidence 899999976432 222 234455543 456678999999999997755
No 9
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=75.46 E-value=23 Score=33.83 Aligned_cols=174 Identities=16% Similarity=0.142 Sum_probs=98.8
Q ss_pred eEeecCCCcchHHHhhhcCCCC-ChhhhhhhhhhcccCCCCCCceeEEeeccccccccccCCcchHHHH-HhCCceeeee
Q 021290 69 ILAMDESNATCGKRLASIGLEN-TEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVL-VEQNIVPGIK 146 (314)
Q Consensus 69 IlA~DES~gt~~Krl~~iGven-te~nr~~yR~ll~ttp~l~~~IsGvILfeETl~q~~~dG~~~~~~L-~~kGIvPGIK 146 (314)
|+|+|+.. ++.+-++..|-.. +.+.-..+++++.. .+..+.+|+++.. ++.+. -.... .+.|++.++
T Consensus 26 ilA~DHR~-sl~~m~~~~~~~~~~~~~l~~~K~lv~~--~~~~~asaILlD~-~~G~~------a~~~~~~~~GLii~~- 94 (332)
T 3iv3_A 26 ALAFDQRG-ALKCLMAQYQMKEPTVAQMEELKVLVSE--ELTPYASSILLDP-EYGLP------AAQARDREAGLLLAY- 94 (332)
T ss_dssp EEEECCSH-HHHHHHHTTTTSCCCHHHHHHHHHHHHH--HHGGGSSEEEECT-TTCHH------HHHTSCTTCEEEEEC-
T ss_pred EEEcCChh-HHHHHHHhcCCCCCChHHHHHHHHHHHH--HHhcCCcEEEEch-hhCHH------HhccccCCCcEEEEe-
Confidence 99999974 6778888877443 34455677777653 2345577755544 44322 11111 456777655
Q ss_pred cCCCcccCCCCC----CCCccCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHH-HHHHHHHHHHHHHHHhCCce
Q 021290 147 VDKGLVPLAGSN----DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV-REAAWGLARYAAIAQDNGLV 221 (314)
Q Consensus 147 VDkGl~pl~g~~----gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI-~~na~~LAryAaicQ~~GLV 221 (314)
++ +|.+ |.....=++.=.++++ ++||..-|--.-+..++.+ .+ .+|...|.|.+.-|++.|+=
T Consensus 95 -E~-----~G~~~~~~gr~p~~l~~~sve~a~---~~GADAVk~lv~~g~d~~~---e~~~~q~~~l~rv~~ec~~~GiP 162 (332)
T 3iv3_A 95 -EK-----TGYDANTTSRLPDCLVDWSIKRLK---EAGADAVKFLLYYDVDGDP---QVNVQKQAYIERIGSECQAEDIP 162 (332)
T ss_dssp -BC-----CCCCTTSSCCCCCBCTTCCHHHHH---HTTCSEEEEEEEECTTSCH---HHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -cc-----CCCCcCCCCCCCccccccCHHHHH---HcCCCEEEEEEEcCCCchH---HHHHHHHHHHHHHHHHHHHcCCc
Confidence 22 1111 1111111222245555 4799877765444332222 33 36677899999999999997
Q ss_pred eeecceec---CCCCcChhHHHHHHHHHHHHHHHHH--HhCCcccccccccccc
Q 021290 222 PIVEPEIL---LDGDHGIDRTFEVAQKVWAEVFFYL--AENNVMFEGILLKPSM 270 (314)
Q Consensus 222 PIVEPEVl---~dgdH~i~~c~~vte~VL~~vf~~L--~~~~V~lEG~lLKPnM 270 (314)
=++||=.. +.++||.+.. ++-..++....+.+ .+.|+++ +|-.+
T Consensus 163 lllEil~y~~~~~~~~~~~~a-~~~p~~V~~a~R~~~~~elGaDv----~Kve~ 211 (332)
T 3iv3_A 163 FFLEILTYDETISNNSSVEFA-KVKVHKVNDAMKVFSAERFGIDV----LKVEV 211 (332)
T ss_dssp EEEEEEECBTTBSCTTSHHHH-TTHHHHHHHHHHHHTSGGGCCSE----EEECC
T ss_pred eEEEEeccCCCCCCCcchhhh-ccCHHHHHHHHHHHhhcCcCCcE----EEEec
Confidence 78877442 2357777664 34445556667777 4556664 56543
No 10
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=57.34 E-value=22 Score=33.09 Aligned_cols=163 Identities=18% Similarity=0.205 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhhhhhhhhhcccCCCCCCceeEEeecccccccc--ccCC
Q 021290 52 ADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQS--TTDG 129 (314)
Q Consensus 52 ~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~nr~~yR~ll~ttp~l~~~IsGvILfeETl~q~--~~dG 129 (314)
.+|....+++|+.--+==+-+|=-+| || +.+.-.|.-|+++ .+ -+.||.|=|-+.-.+ ..+|
T Consensus 67 ~~em~~~~~~I~r~~~~PviaD~d~G--------yg--~~~~~~~~v~~l~-~a-----Ga~gv~iED~~~pKrcgh~~g 130 (287)
T 3b8i_A 67 LSEFVEQATRIGRVARLPVIADADHG--------YG--NALNVMRTVVELE-RA-----GIAALTIEDTLLPAQFGRKST 130 (287)
T ss_dssp HHHHHHHHHHHHTTCSSCEEEECTTC--------SS--SHHHHHHHHHHHH-HH-----TCSEEEEECBCCSCCTTTCTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC--------CC--CHHHHHHHHHHHH-Hh-----CCeEEEEcCCCCccccCCCCC
Confidence 45777778888762222234454443 23 3333344445444 22 266776666554111 1123
Q ss_pred c-----chHHHH---HhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHH
Q 021290 130 K-----KMVDVL---VEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV 201 (314)
Q Consensus 130 ~-----~~~~~L---~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI 201 (314)
+ -+++.+ .+.++-++.+| .+-+ +. ...|||++.+|++.|.+.||+ .|-+...|+...+
T Consensus 131 kl~~~~e~~~~I~aa~~a~~~~~~~i------~aRt-da-a~~gl~~ai~Ra~ay~eAGAd------~i~~e~~~~~~~~ 196 (287)
T 3b8i_A 131 DLICVEEGVGKIRAALEARVDPALTI------IART-NA-ELIDVDAVIQRTLAYQEAGAD------GICLVGVRDFAHL 196 (287)
T ss_dssp CBCCHHHHHHHHHHHHHHCCSTTSEE------EEEE-ET-TTSCHHHHHHHHHHHHHTTCS------EEEEECCCSHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCCCCcEE------EEec-hh-hhcCHHHHHHHHHHHHHcCCC------EEEecCCCCHHHH
Confidence 3 233433 45666444443 2111 12 346999999999999999998 3444445653321
Q ss_pred HHHHHHHHHHHHHHHhCCceeeecceecCCC---CcChhHHHH-----------HHHHHHHHHHHHHHhCC
Q 021290 202 REAAWGLARYAAIAQDNGLVPIVEPEILLDG---DHGIDRTFE-----------VAQKVWAEVFFYLAENN 258 (314)
Q Consensus 202 ~~na~~LAryAaicQ~~GLVPIVEPEVl~dg---dH~i~~c~~-----------vte~VL~~vf~~L~~~~ 258 (314)
..||++-. +|++ ++..| ..+.+...+ .....+.++++.|.++|
T Consensus 197 ----------~~i~~~~~-~P~i---i~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa~~a~~~~l~~~g 253 (287)
T 3b8i_A 197 ----------EAIAEHLH-IPLM---LVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREER 253 (287)
T ss_dssp ----------HHHHTTCC-SCEE---EECTTCGGGCCHHHHHHTTEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHhCC-CCEE---EeCCCCCCCCCHHHHHHcCCcEEEEChHHHHHHHHHHHHHHHHcC
Confidence 33466665 7888 54433 334444432 11223333677776654
No 11
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=55.53 E-value=21 Score=29.92 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=62.3
Q ss_pred cchHHHHHHHHHHhcCC--CCceEeecCCCcchHHHhhh-cCCCCChh------hhhhhhhhcccCCCCCCceeEEeecc
Q 021290 49 GSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTEA------NRQAYRTLLVTAPGLGQYISGAILFE 119 (314)
Q Consensus 49 ~~~~~eL~~tA~~i~a~--GKGIlA~DES~gt~~Krl~~-iGvente~------nr~~yR~ll~ttp~l~~~IsGvILfe 119 (314)
...++++...|+++..- |-.|.| |++|++.|+. -|++-+.- .|...-++|- +..|.-||-|.
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-----~geIdlVInt~ 82 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARVA-----EGRILAVIFFR 82 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHHH-----TTCEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHHH-----CCCccEEEEcc
Confidence 46789999999999997 888998 8999999999 99987553 3334444442 67899999999
Q ss_pred c--ccccc-ccCCcchHHHHHhCC
Q 021290 120 E--TLYQS-TTDGKKMVDVLVEQN 140 (314)
Q Consensus 120 E--Tl~q~-~~dG~~~~~~L~~kG 140 (314)
+ + .|. ..||..+-..--..+
T Consensus 83 ~pl~-~~~h~~D~~~IrR~A~~~~ 105 (134)
T 2xw6_A 83 DPLT-AQPHEPDVQALLRVCDVHG 105 (134)
T ss_dssp CTTT-CCTTSCCSHHHHHHHHHHT
T ss_pred Cccc-CCCccchHHHHHHHHHHcC
Confidence 8 5 555 678877666554454
No 12
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=41.48 E-value=63 Score=27.82 Aligned_cols=54 Identities=7% Similarity=-0.056 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCC
Q 021290 201 VREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENN 258 (314)
Q Consensus 201 I~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~ 258 (314)
..+++..+++. .++.|.+|+ +=++..+|.|+...-.......|.-+|++|+.||
T Consensus 224 ~~~~~~~~~~~---L~~~g~~~~-~~~~~~~g~H~~~~w~~~l~~~l~~~~~~~~~~~ 277 (280)
T 1r88_A 224 AMGNSRMFYNQ---YRSVGGHNG-HFDFPASGDNGWGSWAPQLGAMSGDIVGAIRHHH 277 (280)
T ss_dssp HHHHHHHHHHH---HHHTTCCSE-EEECCSSCCSSHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHH---HHHCCCcce-EEEecCCCCcChhHHHHHHHHHHHHHHHHHhhhc
Confidence 45666666555 577883342 3344468999999888888999999999998876
No 13
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=39.36 E-value=37 Score=27.85 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=49.6
Q ss_pred cchHHHHHHHHHHhcCCCCceEeecCCCcchHHHhhhcCCCCChhh------h----hhhhhhcccCCCCCCceeEEeec
Q 021290 49 GSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEAN------R----QAYRTLLVTAPGLGQYISGAILF 118 (314)
Q Consensus 49 ~~~~~eL~~tA~~i~a~GKGIlA~DES~gt~~Krl~~iGvente~n------r----~~yR~ll~ttp~l~~~IsGvILf 118 (314)
...++++.+.|+++..-|--|.| ++.+.+.|+..||+-+.-+ | ...+++|- +..|.-||-+
T Consensus 33 d~dK~~l~~~a~~l~~lGf~i~A----T~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-----~g~i~lVInt 103 (143)
T 2yvq_A 33 QSFRPRFLGVAEQLHNEGFKLFA----TEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-----DGSIDLVINL 103 (143)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEE----EHHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-----TTSCCEEEEC
T ss_pred ccchHHHHHHHHHHHHCCCEEEE----CchHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-----CCCceEEEEC
Confidence 46789999999999997777888 4577899999999876632 3 33444432 4567777777
Q ss_pred cccccccccCCc
Q 021290 119 EETLYQSTTDGK 130 (314)
Q Consensus 119 eETl~q~~~dG~ 130 (314)
.+...|...||.
T Consensus 104 ~~~~~~~~~d~~ 115 (143)
T 2yvq_A 104 PNNNTKFVHDNY 115 (143)
T ss_dssp CCCCGGGHHHHH
T ss_pred CCCCCcCCccHH
Confidence 655433333433
No 14
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=39.25 E-value=24 Score=30.14 Aligned_cols=90 Identities=17% Similarity=0.163 Sum_probs=62.7
Q ss_pred CccccccccchHHHHHHHHHHhcCC--CCceEeecCCCcchHHHhhh-cCCCCChh------hhhhhhhhcccCCCCCCc
Q 021290 41 PSSLTIRAGSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTEA------NRQAYRTLLVTAPGLGQY 111 (314)
Q Consensus 41 ~~~~~~~~~~~~~eL~~tA~~i~a~--GKGIlA~DES~gt~~Krl~~-iGvente~------nr~~yR~ll~ttp~l~~~ 111 (314)
++.+..+ ...++++...|+++..- |-.|.| |++|++.|+. -|++-+.- .|.+.-++|- +..
T Consensus 13 ~V~lsv~-D~dK~~~v~~ak~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-----~ge 82 (152)
T 1b93_A 13 HIALVAH-DHCKQMLMSWVERHQPLLEQHVLYA----TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALIS-----EGK 82 (152)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTHHHHTTSEEEE----ETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHHH-----TTC
T ss_pred EEEEEEe-hhhHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHHhCceeEEEEecCCCCCchHHHHHH-----CCC
Confidence 3334444 56889999999999997 888998 8999999999 99987653 3334444442 577
Q ss_pred eeEEeeccccc-ccc-ccCCcchHHHHHhCC
Q 021290 112 ISGAILFEETL-YQS-TTDGKKMVDVLVEQN 140 (314)
Q Consensus 112 IsGvILfeETl-~q~-~~dG~~~~~~L~~kG 140 (314)
|.-||-|.+-| .|. ..||..+-..--..+
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~ 113 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLATVWN 113 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHHHTT
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHHHcC
Confidence 99999999833 344 456555554444454
No 15
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=36.64 E-value=41 Score=29.60 Aligned_cols=91 Identities=20% Similarity=0.230 Sum_probs=64.6
Q ss_pred CccccccccchHHHHHHHHHHhcCC--CCceEeecCCCcchHHHhhh-cCCCCChhh------hhhhhhhcccCCCCCCc
Q 021290 41 PSSLTIRAGSYADELVKTAKTVASP--GRGILAMDESNATCGKRLAS-IGLENTEAN------RQAYRTLLVTAPGLGQY 111 (314)
Q Consensus 41 ~~~~~~~~~~~~~eL~~tA~~i~a~--GKGIlA~DES~gt~~Krl~~-iGvente~n------r~~yR~ll~ttp~l~~~ 111 (314)
++.+... ...++++...|+++..- |-.|.| |++|++.|+. -||+-+.-+ |.+.-++|- +..
T Consensus 29 ~V~lsv~-D~dK~~lv~~ak~~~~lL~Gf~L~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~-----~ge 98 (178)
T 1vmd_A 29 RIALIAH-DRRKRDLLEWVSFNLGTLSKHELYA----TGTTGALLQEKLGLKVHRLKSGPLGGDQQIGAMIA-----EGK 98 (178)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHSHHHHTTSEEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHHH-----TTS
T ss_pred EEEEEEe-hhhHHHHHHHHHHHHHHhcCCEEEE----chHHHHHHHHHhCceeEEEeecCCCCCchHHHHHH-----CCC
Confidence 3444444 56889999999999997 888998 8999999999 999876533 333444442 577
Q ss_pred eeEEeeccccc-ccc-ccCCcchHHHHHhCCc
Q 021290 112 ISGAILFEETL-YQS-TTDGKKMVDVLVEQNI 141 (314)
Q Consensus 112 IsGvILfeETl-~q~-~~dG~~~~~~L~~kGI 141 (314)
|.-||-|.+-| .|. ..||..+-..--..+|
T Consensus 99 IdlVInt~dPl~~~~h~~D~~~IRR~A~~~~I 130 (178)
T 1vmd_A 99 IDVLIFFWDPLEPQAHDVDVKALIRIATVYNI 130 (178)
T ss_dssp CCEEEEECCSSSCCTTSCCHHHHHHHHHHTTC
T ss_pred ccEEEEccCccCCCcccccHHHHHHHHHHcCC
Confidence 99999999832 455 5677666655545553
No 16
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=33.63 E-value=2.2e+02 Score=24.15 Aligned_cols=165 Identities=13% Similarity=0.128 Sum_probs=96.4
Q ss_pred CceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhH---HHHHHHHHhhCCCccccc
Q 021290 110 QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDG---LASRTAAYYQQGARFAKW 186 (314)
Q Consensus 110 ~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDg---L~~R~~~y~~~Ga~FAKW 186 (314)
..+-|+|++.-... .+..+.|.++| +|-|=+|..... . + ...-+.|+ -..-+....+.|.+
T Consensus 64 ~~vdGiIi~~~~~~------~~~~~~l~~~~-iPvV~~~~~~~~-~---~-~~~V~~D~~~~~~~a~~~L~~~G~~---- 127 (294)
T 3qk7_A 64 RRVDALIVAHTQPE------DFRLQYLQKQN-FPFLALGRSHLP-K---P-YAWFDFDNHAGASLAVKRLLELGHQ---- 127 (294)
T ss_dssp TCCSEEEECSCCSS------CHHHHHHHHTT-CCEEEESCCCCS-S---C-CEEEEECHHHHHHHHHHHHHHTTCC----
T ss_pred CCCCEEEEeCCCCC------hHHHHHHHhCC-CCEEEECCCCCC-C---C-CCEEEcChHHHHHHHHHHHHHCCCc----
Confidence 46889998754331 15667788887 577777765321 1 1 11222332 22222333455643
Q ss_pred ceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHH-----------------H
Q 021290 187 RTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWA-----------------E 249 (314)
Q Consensus 187 RsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~-----------------~ 249 (314)
.+.-+...+.... ...-+.-|-..++++|+-+ +++....++.+.+..++.+++.|. .
T Consensus 128 -~I~~i~~~~~~~~---~~~R~~Gf~~al~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~nd~~A~g 201 (294)
T 3qk7_A 128 -RIAFVSTDARISY---VDQRLQGYVQTMSEAGLMP--LAGYLQKADPTRPGGYLAASRLLALEVPPTAIITDCNMLGDG 201 (294)
T ss_dssp -CEEEEEESSCCHH---HHHHHHHHHHHHHTTTCCC--CTTCEEEECSSHHHHHHHHHHHHHSSSCCSEEEESSHHHHHH
T ss_pred -eEEEEeCCcccch---HHHHHHHHHHHHHHCCCCC--ChhHeecCCCCHHHHHHHHHHHHcCCCCCcEEEECCHHHHHH
Confidence 3444432222221 2233555666688999732 344455678888888888887775 4
Q ss_pred HHHHHHhCCccccc---------cccccccccCCCCCCCCCCh-HHHHHHHHHHhhccC
Q 021290 250 VFFYLAENNVMFEG---------ILLKPSMVTPGAECKEKATP-QQVAEYTLKLLHRRI 298 (314)
Q Consensus 250 vf~~L~~~~V~lEG---------~lLKPnMV~pG~~~~~~~s~-eeVA~~Tv~~L~rtV 298 (314)
++++|+++|+...+ +-+ ..+..|+.. +-...+ ++++...++.|.+.+
T Consensus 202 ~~~al~~~G~~vP~di~vig~D~~~~-~~~~~p~lt-tv~~~~~~~~g~~av~~L~~~i 258 (294)
T 3qk7_A 202 VASALDKAGLLGGEGISLIAYDGLPD-DSLLDIAVT-PIVQNTRTSVGKQIASMICDLL 258 (294)
T ss_dssp HHHHHHHTTCSSTTSCEEEEETCSCT-TCSCCSCCE-EEECCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCceEEEeecCccH-HhhcCCCce-eEecCcHHHHHHHHHHHHHHHh
Confidence 78899999976432 222 444556654 345678 799999999887543
No 17
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=30.42 E-value=2.1e+02 Score=25.36 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=62.1
Q ss_pred cCCcchHHHHHh----CC--ceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeecC-CCcCHH
Q 021290 127 TDGKKMVDVLVE----QN--IVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-NGPSAL 199 (314)
Q Consensus 127 ~dG~~~~~~L~~----kG--IvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~-~~Ps~~ 199 (314)
.|-....+.|.+ .| +=.-||||.|-.+- .-|-.+ +.+..+.+++.+ ...=+++-+..+. ..+...
T Consensus 104 Vds~~~a~~l~~~a~~~~~~~~V~lqVntG~e~~--R~G~~~-ee~~~l~~~i~~-----~~~l~l~Glmt~~~~~~d~~ 175 (245)
T 3sy1_A 104 IDRLRIATRLNDQRPAELPPLNVLIQINISDENS--KSGIQL-AELDELAAAVAE-----LPRLRLRGLSAIPAPESEYV 175 (245)
T ss_dssp ECCHHHHHHHHHHSCTTSCCEEEEEEBCCSCTTC--CSSBCG-GGHHHHHHHHTT-----CTTEEEEEEECCCCCCSCHH
T ss_pred cCCHHHHHHHHHHHHHcCCCceEEEEEECCCCcC--CcCCCH-HHHHHHHHHHHc-----CCCCeEEEEEEeCCCCCCHH
Confidence 445555566632 23 44579999985432 224432 345566665543 3345677787773 445566
Q ss_pred HHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHH
Q 021290 200 AVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRT 239 (314)
Q Consensus 200 aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c 239 (314)
.+.+.-..|.....-.++.|. + -+++.|-+.+|.+.+
T Consensus 176 ~~~~~f~~l~~l~~~l~~~~~-~--~~~LSmGmS~d~~~A 212 (245)
T 3sy1_A 176 RQFEVARQMAVAFAGLKTRYP-H--IDTLALGQSDDMEAA 212 (245)
T ss_dssp HHHHHHHHHHHHHHHHHTTST-T--CCEEECCCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC-C--CCEEeccCcHhHHHH
Confidence 666666667766665666664 3 368889889998774
No 18
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=29.35 E-value=2.8e+02 Score=24.08 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=95.8
Q ss_pred CCceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHH---HHHHHHHhhCCCcccc
Q 021290 109 GQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGL---ASRTAAYYQQGARFAK 185 (314)
Q Consensus 109 ~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL---~~R~~~y~~~Ga~FAK 185 (314)
.+.+-|+|++.-. ...+..+.|++.| +|-|=+|.-. +.+ .. .-+.|+- ..-+....+.|.+
T Consensus 116 ~~~vdGiIi~~~~------~~~~~~~~l~~~~-iPvV~~~~~~-~~~---~~--~V~~D~~~~~~~a~~~L~~~G~~--- 179 (339)
T 3h5o_A 116 QHRPDGVLITGLS------HAEPFERILSQHA-LPVVYMMDLA-DDG---RC--CVGFSQEDAGAAITRHLLSRGKR--- 179 (339)
T ss_dssp TTCCSEEEEECSC------CCTTHHHHHHHTT-CCEEEEESCC-SSS---CC--EEECCHHHHHHHHHHHHHHTTCC---
T ss_pred cCCCCEEEEeCCC------CCHHHHHHHhcCC-CCEEEEeecC-CCC---Ce--EEEECHHHHHHHHHHHHHHCCCC---
Confidence 4678999987522 1225677788887 4666665421 111 11 2233332 2222334456643
Q ss_pred cceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHH----------------
Q 021290 186 WRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAE---------------- 249 (314)
Q Consensus 186 WRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~---------------- 249 (314)
.+.-+...+... ...-+.-|-..++++|+ +..++++...++.+.+...+.+++.|..
T Consensus 180 --~I~~i~~~~~~~----~~~R~~Gf~~al~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ai~~~nD~~A~ 252 (339)
T 3h5o_A 180 --RIGFLGAQLDER----VMKRLDGYRAALDAADC-RDAGLEWLDPQPSSMQMGADMLDRALAERPDCDALFCCNDDLAI 252 (339)
T ss_dssp --SEEEEEESCCHH----HHHHHHHHHHHHHHTTC-CCGGGEEEECSCCCHHHHHHHHHHHHHHCTTCCEEEESSHHHHH
T ss_pred --eEEEEeCCCCcc----HHHHHHHHHHHHHHCCC-CCCChheEecCCCCHHHHHHHHHHHHcCCCCCcEEEECChHHHH
Confidence 333333222221 12345556667899998 2234455667888999988888887764
Q ss_pred -HHHHHHhCCccccccc--------cccccccCCCCCCCCCChHHHHHHHHHHhhcc
Q 021290 250 -VFFYLAENNVMFEGIL--------LKPSMVTPGAECKEKATPQQVAEYTLKLLHRR 297 (314)
Q Consensus 250 -vf~~L~~~~V~lEG~l--------LKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rt 297 (314)
++++|+++|+...+-+ --..+..|... +-...+++++...++.|.+.
T Consensus 253 g~~~al~~~G~~vP~disvvgfD~~~~~~~~~p~lt-tv~~~~~~~g~~Av~~L~~~ 308 (339)
T 3h5o_A 253 GALARSQQLGIAVPERLAIAGFNDLQPAAWCTPPLT-TVATPRRDIGVHAAKALLQL 308 (339)
T ss_dssp HHHHHHHHTTCCTTTTCEEECSBCCGGGTTSSSCCB-EEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCEEEEEECCHHHHhccCCCce-EEEeCHHHHHHHHHHHHHHH
Confidence 6889999997643211 11233445543 34567899999999988754
No 19
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=28.27 E-value=68 Score=29.57 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=41.6
Q ss_pred cchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccce
Q 021290 130 KKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRT 188 (314)
Q Consensus 130 ~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRs 188 (314)
++++++++++|+-+||=.|-|.....|.++- .++-...-++.|.+-|..|=|+-.
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~----~~~~~~~da~~~a~wGvdylK~D~ 140 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGT----TLDKVVQDAQTFAEWKVDMLKLDG 140 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCB----CGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCch----hHhHHHHHHHHHHHhCCceEeecc
Confidence 5789999999999999999988776665441 245555557778888888877653
No 20
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=27.99 E-value=2e+02 Score=26.32 Aligned_cols=81 Identities=20% Similarity=0.187 Sum_probs=49.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHHhCCceee------ecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccc
Q 021290 196 PSALAVREAAWGLARYAAIAQDNGLVPI------VEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPS 269 (314)
Q Consensus 196 Ps~~aI~~na~~LAryAaicQ~~GLVPI------VEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPn 269 (314)
-|...+.+++....+| +.+.|+-.- +-+| .+|.++.+...++.+++ .+.|++- +-| +
T Consensus 115 ~s~~e~l~~~~~~v~~---ak~~G~~v~~~i~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~Ga~~--i~l-~- 177 (307)
T 1ydo_A 115 KSTSESLHILKQVNND---AQKANLTTRAYLSTVFGCP--YEKDVPIEQVIRLSEAL--------FEFGISE--LSL-G- 177 (307)
T ss_dssp SCHHHHHHHHHHHHHH---HHHTTCEEEEEEECTTCBT--TTBCCCHHHHHHHHHHH--------HHHTCSC--EEE-E-
T ss_pred CCHHHHHHHHHHHHHH---HHHCCCEEEEEEEEEecCC--cCCCCCHHHHHHHHHHH--------HhcCCCE--EEE-c-
Confidence 4566667777777777 578998532 2222 24678888766666554 3335431 111 1
Q ss_pred cccCCCCCCCCCChHHHHHHHHHHhhccCCC
Q 021290 270 MVTPGAECKEKATPQQVAEYTLKLLHRRIPP 300 (314)
Q Consensus 270 MV~pG~~~~~~~s~eeVA~~Tv~~L~rtVP~ 300 (314)
|.....+|++|.+ .++.|++.+|.
T Consensus 178 ------DT~G~~~P~~v~~-lv~~l~~~~~~ 201 (307)
T 1ydo_A 178 ------DTIGAANPAQVET-VLEALLARFPA 201 (307)
T ss_dssp ------CSSCCCCHHHHHH-HHHHHHTTSCG
T ss_pred ------CCCCCcCHHHHHH-HHHHHHHhCCC
Confidence 3334678999887 47778888874
No 21
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=27.74 E-value=1.2e+02 Score=24.25 Aligned_cols=77 Identities=5% Similarity=0.040 Sum_probs=52.6
Q ss_pred eeecceecC-CCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCChHHHHHHHHHHhhccCCC
Q 021290 222 PIVEPEILL-DGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPP 300 (314)
Q Consensus 222 PIVEPEVl~-dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rtVP~ 300 (314)
+-++|.-+. ||+++...... .+.+....|.+++.+++..=..++-|+++.-..........+.+..+ +..+++..|-
T Consensus 15 ~~~~p~~~~~d~~~~~~~~~~-n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~-~~~~~~~~pd 92 (159)
T 3k0z_A 15 EMPKPKAMTIDPSLSQKEATE-MVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFA-AQNFRKIVPN 92 (159)
T ss_dssp TSCCCSSEEECTTSCHHHHHH-HHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHH-HHHHHTTCCS
T ss_pred cCCCCceeeccCCCChhhhHH-HHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHH-HHHHHHhCCC
Confidence 567888765 87777655544 56677888999999987666667889988643211234577887765 5666666654
No 22
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=26.90 E-value=87 Score=30.72 Aligned_cols=61 Identities=16% Similarity=0.014 Sum_probs=39.0
Q ss_pred CCCccCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceee-ecceecCCC
Q 021290 159 DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPI-VEPEILLDG 232 (314)
Q Consensus 159 gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPI-VEPEVl~dg 232 (314)
|+..+ ++++.+++++-+.+ -.-+++--+.++... ++ +.+....|+++||-+. +.|+++.+-
T Consensus 73 g~~r~--~~e~~~d~~~v~~l--~~~~~~v~lH~p~d~------~d---~~~lk~~l~e~GL~l~~i~~~~f~hp 134 (438)
T 3m0m_A 73 GEPRG--IFDKLDDCAVIQQL--TRATPNVSLHIPWDK------AD---PKELKARGDALGLGFDAMNSNTFSDA 134 (438)
T ss_dssp SCCCS--HHHHHHHHHHHHHH--HSCCCEEEEETTTTC------CC---HHHHHHHHHHHTCEEEEEECCCSSCC
T ss_pred CCCCC--HHHHHHHHHHHhcc--cCCCcceeecCCccH------HH---HHHHHHHHHHcCCceEEeecccccCc
Confidence 55444 89999999876432 234566666665332 33 3444445899999877 889876653
No 23
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=26.63 E-value=3.1e+02 Score=23.66 Aligned_cols=165 Identities=16% Similarity=0.236 Sum_probs=93.3
Q ss_pred CCceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHH--HHHHHHH-hhCCCcccc
Q 021290 109 GQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGL--ASRTAAY-YQQGARFAK 185 (314)
Q Consensus 109 ~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL--~~R~~~y-~~~Ga~FAK 185 (314)
.+.+-|+|++.-... .+..+.|.+.| +|.|=+|..... + + ...-+.|+- ...+.+| .+.|.
T Consensus 114 ~~~vdgiI~~~~~~~------~~~~~~l~~~~-iPvV~~~~~~~~-~---~-~~~V~~D~~~~~~~a~~~L~~~G~---- 177 (332)
T 2hsg_A 114 GKQVDGIIFMSGNVT------EEHVEELKKSP-VPVVLAASIEST-N---Q-IPSVTIDYEQAAFDAVQSLIDSGH---- 177 (332)
T ss_dssp CCSSCCEEECCSSCC------HHHHHHHTTSS-SCEEEESCCCSC-T---T-SCEEEECHHHHHHHHHHHHHTTTC----
T ss_pred hCCCcEEEEecCCCC------HHHHHHHHhCC-CCEEEEccccCC-C---C-CCEEEEChHHHHHHHHHHHHHCCC----
Confidence 466889998753321 14455666666 577777764321 1 1 122333432 2233333 34553
Q ss_pred cceeeecCCCc-CHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHH----------------
Q 021290 186 WRTVVSIPNGP-SALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWA---------------- 248 (314)
Q Consensus 186 WRsVi~i~~~P-s~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~---------------- 248 (314)
|.+.-+...+ ..... ..-+.-|-..++++|+ ++ +++....++.+.+..++.+++.|.
T Consensus 178 -~~I~~i~~~~~~~~~~---~~R~~Gf~~al~~~g~-~~-~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ai~~~nd~~A 251 (332)
T 2hsg_A 178 -KNIAFVSGTLEEPINH---AKKVKGYKRALTESGL-PV-RDSYIVEGDYTYDSGIEAVEKLLEEDEKPTAIFVGTDEMA 251 (332)
T ss_dssp -SCEEEEESCTTSHHHH---TTHHHHHHHHHHTTTC-CC-CGGGEEECCSSHHHHHHHHHHHHHSSSCCSEEEESSHHHH
T ss_pred -CEEEEEeCCcccCccH---HHHHHHHHHHHHHcCC-CC-ChheEEeCCCCHHHHHHHHHHHHcCCCCCeEEEECChHHH
Confidence 4444454333 32222 2234445566889995 32 344445678888888777777664
Q ss_pred -HHHHHHHhCCcccc---------ccccccccccCCCCCCCCCChHHHHHHHHHHhhcc
Q 021290 249 -EVFFYLAENNVMFE---------GILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRR 297 (314)
Q Consensus 249 -~vf~~L~~~~V~lE---------G~lLKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rt 297 (314)
.++++|+++|+... ++-+ ..+..|+.. +-...+++++...++.|.+.
T Consensus 252 ~g~~~al~~~G~~vP~disvvg~D~~~~-~~~~~p~lt-tv~~~~~~~g~~a~~~l~~~ 308 (332)
T 2hsg_A 252 LGVIHGAQDRGLNVPNDLEIIGFDNTRL-STMVRPQLT-SVVQPMYDIGAVAMRLLTKY 308 (332)
T ss_dssp HHHHHHHHHTTCCHHHHCEEEEESCCGG-GGSSSSCCE-EEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCeEEEEECChHH-HhccCCcee-EEECCHHHHHHHHHHHHHHH
Confidence 36789999987532 2222 344556553 45667899999999888654
No 24
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=25.70 E-value=90 Score=29.28 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=46.6
Q ss_pred CChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCC---CcChhHH-
Q 021290 164 QGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDG---DHGIDRT- 239 (314)
Q Consensus 164 ~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg---dH~i~~c- 239 (314)
.|||+-.+|++.|.+.||. +|-+...++...|.+ +|++-.-+|++= -+...| ..+.+..
T Consensus 175 ~gldeAi~Ra~ay~eAGAD------~ifi~~~~~~~~~~~----------i~~~~~~~Pv~~-n~~~~g~~p~~t~~eL~ 237 (307)
T 3lye_A 175 LGYEECIERLRAARDEGAD------VGLLEGFRSKEQAAA----------AVAALAPWPLLL-NSVENGHSPLITVEEAK 237 (307)
T ss_dssp HCHHHHHHHHHHHHHTTCS------EEEECCCSCHHHHHH----------HHHHHTTSCBEE-EEETTSSSCCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCC------EEEecCCCCHHHHHH----------HHHHccCCceeE-EeecCCCCCCCCHHHHH
Confidence 5899999999999999987 455555565443332 344432245521 011111 2233333
Q ss_pred -------------HHHHHHHHHHHHHHHHhCCcc
Q 021290 240 -------------FEVAQKVWAEVFFYLAENNVM 260 (314)
Q Consensus 240 -------------~~vte~VL~~vf~~L~~~~V~ 260 (314)
...+-+.+..+++.|.++|-.
T Consensus 238 ~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~~ 271 (307)
T 3lye_A 238 AMGFRIMIFSFATLAPAYAAIRETLVRLRDHGVV 271 (307)
T ss_dssp HHTCSEEEEETTTHHHHHHHHHHHHHHHHHHSCC
T ss_pred HcCCeEEEEChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 344556667778888877754
No 25
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.10 E-value=3e+02 Score=23.01 Aligned_cols=165 Identities=13% Similarity=0.133 Sum_probs=87.5
Q ss_pred CCceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhH--HHHHHH-HHhhCCCcccc
Q 021290 109 GQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDG--LASRTA-AYYQQGARFAK 185 (314)
Q Consensus 109 ~~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDg--L~~R~~-~y~~~Ga~FAK 185 (314)
.+.+-|+|++.-.. ..+..+.++++| +|.|=+|..... . + ...-+.|. -...+. ...+.|.
T Consensus 62 ~~~vdgiIi~~~~~------~~~~~~~~~~~~-iPvV~~~~~~~~-~---~-~~~V~~D~~~~g~~a~~~L~~~G~---- 125 (291)
T 3egc_A 62 ERRVDGLILAPSEG------EHDYLRTELPKT-FPIVAVNRELRI-P---G-CGAVLSENVRGARTAVEYLIARGH---- 125 (291)
T ss_dssp HTTCSEEEECCCSS------CCHHHHHSSCTT-SCEEEESSCCCC-T---T-CEEEEECHHHHHHHHHHHHHHTTC----
T ss_pred HCCCCEEEEeCCCC------ChHHHHHhhccC-CCEEEEecccCC-C---C-CCEEEECcHHHHHHHHHHHHHcCC----
Confidence 35688999876433 234566666666 577777765431 1 1 11122222 222333 3344563
Q ss_pred cceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHH-----------------
Q 021290 186 WRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWA----------------- 248 (314)
Q Consensus 186 WRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~----------------- 248 (314)
|.+.-+...+.... ...-+.-|-..++++|+-+ +++....++.+.+...+.+++.|.
T Consensus 126 -~~i~~i~~~~~~~~---~~~R~~gf~~~l~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~ 199 (291)
T 3egc_A 126 -TRIGAIVGSAGLMT---SRERLKGFRAAMSAAGLPV--RQEWIAAGGVRADNGRDGAIKVLTGADRPTALLTSSHRITE 199 (291)
T ss_dssp -CSEEEECSCTTSHH---HHHHHHHHHHHHHHTTCCC--CGGGEEC------CCHHHHHHHHTC-CCCSEEEESSHHHHH
T ss_pred -CEEEEEeCCCCCcC---HHHHHHHHHHHHHHcCCCC--CHHHeEeCCCChhHHHHHHHHHHhCCCCCcEEEECCcHHHH
Confidence 34555543332222 2333444556688998743 344444566676666666666552
Q ss_pred HHHHHHHhCCccccc---------cccccccccCCCCCCCCCChHHHHHHHHHHhhcc
Q 021290 249 EVFFYLAENNVMFEG---------ILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRR 297 (314)
Q Consensus 249 ~vf~~L~~~~V~lEG---------~lLKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rt 297 (314)
.++++|.++|+...+ +-+ -....|+.. +-...+++++...++.|.+.
T Consensus 200 g~~~al~~~g~~vP~di~vvg~d~~~~-~~~~~p~lt-tv~~~~~~~g~~av~~l~~~ 255 (291)
T 3egc_A 200 GAMQALNVLGLRYGPDVEIVSFDNLPW-MAFLDPPLP-VVEQPTRRIGQEAMRMLIHM 255 (291)
T ss_dssp HHHHHHHHHTCCBTTTBEEEEESCCGG-GGGSSSCCC-EEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCceEEEEecCchh-HhhcCCCce-EEEECHHHHHHHHHHHHHHH
Confidence 578889998876432 222 233445543 45668999999999988754
No 26
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.73 E-value=1.7e+02 Score=24.46 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=91.0
Q ss_pred CceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHH--HHHHHHHh-h--CCCccc
Q 021290 110 QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGL--ASRTAAYY-Q--QGARFA 184 (314)
Q Consensus 110 ~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL--~~R~~~y~-~--~Ga~FA 184 (314)
+.+-|+|++.-.- ....+..+.+.++| +|-|=+|.... +....-+.|.- ...+.+|. + .|.
T Consensus 60 ~~vdgiIi~~~~~----~~~~~~~~~~~~~~-iPvV~~~~~~~------~~~~~V~~D~~~~g~~~~~~l~~~~~g~--- 125 (291)
T 3l49_A 60 QKPDAIIEQLGNL----DVLNPWLQKINDAG-IPLFTVDTATP------HAINNTTSNNYSIGAELALQMVADLGGK--- 125 (291)
T ss_dssp HCCSEEEEESSCH----HHHHHHHHHHHHTT-CCEEEESCCCT------TCSEEEEECHHHHHHHHHHHHHHHHTTC---
T ss_pred cCCCEEEEeCCCh----hhhHHHHHHHHHCC-CcEEEecCCCC------CcCceEecChHHHHHHHHHHHHHHcCCC---
Confidence 4578888763221 01123456667777 56666776431 11222333332 23333332 3 353
Q ss_pred ccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHH---------------
Q 021290 185 KWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAE--------------- 249 (314)
Q Consensus 185 KWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~--------------- 249 (314)
|.+.-+.+.++..... .-+.-|-..++++|=++|++++....++.+.+.+.+.+++.|..
T Consensus 126 --~~i~~i~~~~~~~~~~---~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ai~~~~d 200 (291)
T 3l49_A 126 --GNVLVFNGFYSVPVCK---IRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAYSNVTDMLTKYPNEGDVGAIWACWD 200 (291)
T ss_dssp --EEEEEECSCTTSHHHH---HHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHHHHHHHHHHHCCSTTSCCEEEESSH
T ss_pred --ceEEEEeCCCCCchHH---HHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHHHHHHHHHHhCCCcCCcCEEEECCC
Confidence 3455554333332222 23344555578886568999998888999999888888877653
Q ss_pred -----HHHHHHhCCcc-c-----cccccc----cccccCCCCCCCCCChHHHHHHHHHHhhcc
Q 021290 250 -----VFFYLAENNVM-F-----EGILLK----PSMVTPGAECKEKATPQQVAEYTLKLLHRR 297 (314)
Q Consensus 250 -----vf~~L~~~~V~-l-----EG~lLK----PnMV~pG~~~~~~~s~eeVA~~Tv~~L~rt 297 (314)
++++|.++|+. + .+.-.- -+...|... +-...+++++...++.|.+.
T Consensus 201 ~~a~g~~~al~~~g~~di~vvg~d~~~~~~~~i~~~~~p~lt-tv~~~~~~~g~~av~~l~~~ 262 (291)
T 3l49_A 201 VPMIGATQALQAAGRTDIRTYGVDGSPEFVEMVADPESPAGA-VAAQQPSEIGKLAVQNVARH 262 (291)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEEECCHHHHHHHHCTTSCEEE-EEECCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCCeEEEEecCCHHHHHHHHCCCCCeEE-EEecCHHHHHHHHHHHHHHH
Confidence 46778888763 1 111110 011122211 23456788888888777543
No 27
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=24.32 E-value=1e+02 Score=28.67 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=24.4
Q ss_pred ccCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHH
Q 021290 162 WCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSAL 199 (314)
Q Consensus 162 ~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~ 199 (314)
...|||++.+|+..|.+.||+ .|-+...|+..
T Consensus 162 ~~~gl~~ai~ra~ay~eAGAd------~i~~e~~~~~~ 193 (295)
T 1xg4_A 162 AVEGLDAAIERAQAYVEAGAE------MLFPEAITELA 193 (295)
T ss_dssp HHHCHHHHHHHHHHHHHTTCS------EEEETTCCSHH
T ss_pred hhcCHHHHHHHHHHHHHcCCC------EEEEeCCCCHH
Confidence 356899999999999999998 34455456533
No 28
>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20
Probab=24.19 E-value=44 Score=25.49 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhCCceee
Q 021290 205 AWGLARYAAIAQDNGLVPI 223 (314)
Q Consensus 205 a~~LAryAaicQ~~GLVPI 223 (314)
+...++|...|+++|+-|+
T Consensus 20 ~~vY~~Y~~~C~~~~~~pl 38 (76)
T 1dp7_P 20 STLYNHYLLHSQEQKLEPV 38 (76)
T ss_dssp HHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhcCCccC
Confidence 5678999999999998773
No 29
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=22.98 E-value=3.1e+02 Score=22.44 Aligned_cols=164 Identities=15% Similarity=0.081 Sum_probs=91.4
Q ss_pred CceeEEeeccccccccccCCcchHHHHHhCCceeeeecCCCcccCCCCCCCCccCChhHH--HHHHHH-HhhCCCccccc
Q 021290 110 QYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGL--ASRTAA-YYQQGARFAKW 186 (314)
Q Consensus 110 ~~IsGvILfeETl~q~~~dG~~~~~~L~~kGIvPGIKVDkGl~pl~g~~gE~~t~GLDgL--~~R~~~-y~~~Ga~FAKW 186 (314)
+.+-|+|++.-.- ...+..+.++++| +|-|=+|....+. + ...-+.|.- ...+.+ ..+.|.
T Consensus 57 ~~vdgiIi~~~~~-----~~~~~~~~~~~~~-iPvV~~~~~~~~~----~-~~~V~~d~~~~~~~a~~~L~~~G~----- 120 (272)
T 3o74_A 57 RRCDALFVASCLP-----PEDDSYRELQDKG-LPVIAIDRRLDPA----H-FCSVISDDRDASRQLAASLLSSAP----- 120 (272)
T ss_dssp TTCSEEEECCCCC-----SSCCHHHHHHHTT-CCEEEESSCCCTT----T-CEEEEECHHHHHHHHHHHHHTTCC-----
T ss_pred cCCCEEEEecCcc-----ccHHHHHHHHHcC-CCEEEEccCCCcc----c-cCEEEEchHHHHHHHHHHHHHCCC-----
Confidence 5688999875321 1246777888887 4677777654321 1 112223322 223333 344553
Q ss_pred ceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHH-----------------
Q 021290 187 RTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAE----------------- 249 (314)
Q Consensus 187 RsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~----------------- 249 (314)
|.+.-+...+.... ...-+.-|-..++++|+ ++++...++.+.+...+.+++.|..
T Consensus 121 ~~i~~i~~~~~~~~---~~~R~~gf~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d~~a~ 193 (272)
T 3o74_A 121 RSIALIGARPELSV---SQARAGGFDEALQGYTG----EVRRYQGEAFSRECGQRLMQQLIDDLGGLPDALVTTSYVLLQ 193 (272)
T ss_dssp SEEEEEEECTTSHH---HHHHHHHHHHHTTTCCS----EEEEEEESSSSHHHHHHHHHHHHHHHTSCCSEEEESSHHHHH
T ss_pred cEEEEEecCCCCcc---HHHHHHHHHHHHHHcCC----ChheeecCCCCHHHHHHHHHHHHhcCCCCCcEEEEeCchHHH
Confidence 34444433222221 22344445556888984 3455567788888888777777653
Q ss_pred -HHHHHHhCCccccccc--------cccccccCCCCCCCCCChHHHHHHHHHHhhccC
Q 021290 250 -VFFYLAENNVMFEGIL--------LKPSMVTPGAECKEKATPQQVAEYTLKLLHRRI 298 (314)
Q Consensus 250 -vf~~L~~~~V~lEG~l--------LKPnMV~pG~~~~~~~s~eeVA~~Tv~~L~rtV 298 (314)
++++|.++|+ ...-+ ---....|+.. +-...+++++...++.|.+.+
T Consensus 194 g~~~al~~~g~-vp~di~vvg~d~~~~~~~~~p~lt-tv~~~~~~~g~~a~~~l~~~i 249 (272)
T 3o74_A 194 GVFDTLQARPV-DSRQLQLGTFGDNQLLDFLPLPVN-AMAQQHGQIAATALELALAAI 249 (272)
T ss_dssp HHHHHHHTSCG-GGCCCEEEEESCCGGGGTSSSCEE-EEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-CccceEEEEeCChHHHHhcCCCce-EEEeCHHHHHHHHHHHHHHHH
Confidence 5678888886 32211 01123334433 345678999999998887544
No 30
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=22.04 E-value=2.5e+02 Score=23.86 Aligned_cols=73 Identities=14% Similarity=0.052 Sum_probs=42.7
Q ss_pred CChhHHHHHHHHHhhCCCcccccceeeecCCCc--CHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHH
Q 021290 164 QGLDGLASRTAAYYQQGARFAKWRTVVSIPNGP--SALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFE 241 (314)
Q Consensus 164 ~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~P--s~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~ 241 (314)
..++.+.+-+....++|+..-. +.....| ...+....+..|.+.+.++.+.|+.--+||-. ++.+...+
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~----~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~-----~~~~~~~~ 169 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIG----LHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-----ESADHLLE 169 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEE----ECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS-----SCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEE----EcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC-----CCHHHHHH
Confidence 3455555555555567876422 1112122 33455555566666666788999999999963 45555555
Q ss_pred HHHH
Q 021290 242 VAQK 245 (314)
Q Consensus 242 vte~ 245 (314)
+.++
T Consensus 170 l~~~ 173 (290)
T 3tva_A 170 FIED 173 (290)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5444
No 31
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=22.00 E-value=79 Score=29.61 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=47.0
Q ss_pred cCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCCC---CcChhHH
Q 021290 163 CQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLDG---DHGIDRT 239 (314)
Q Consensus 163 t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dg---dH~i~~c 239 (314)
..|+|+..+|++.|.+.||+ .|-+...|+... +..+|++-. +|++= -++..| ..+.+..
T Consensus 171 ~~g~~~ai~Ra~ay~eAGAD------~i~~e~~~~~~~----------~~~i~~~~~-~P~~~-n~~~~g~tp~~~~~eL 232 (305)
T 3ih1_A 171 VEGLDEAIERANAYVKAGAD------AIFPEALQSEEE----------FRLFNSKVN-APLLA-NMTEFGKTPYYSAEEF 232 (305)
T ss_dssp HHCHHHHHHHHHHHHHHTCS------EEEETTCCSHHH----------HHHHHHHSC-SCBEE-ECCTTSSSCCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCC------EEEEcCCCCHHH----------HHHHHHHcC-CCEEE-eecCCCCCCCCCHHHH
Confidence 35899999999999999998 344554465332 223466654 47641 011112 2334433
Q ss_pred --------------HHHHHHHHHHHHHHHHhCCcc
Q 021290 240 --------------FEVAQKVWAEVFFYLAENNVM 260 (314)
Q Consensus 240 --------------~~vte~VL~~vf~~L~~~~V~ 260 (314)
+..+-+.+..+++.|.++|-.
T Consensus 233 ~~lGv~~v~~~~~~~raa~~a~~~~~~~i~~~g~~ 267 (305)
T 3ih1_A 233 ANMGFQMVIYPVTSLRVAAKAYENVFTLIKETGSQ 267 (305)
T ss_dssp HHTTCSEEEECSHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHcCCCEEEEchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 455556667777777776643
No 32
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=21.80 E-value=3.5e+02 Score=22.48 Aligned_cols=78 Identities=10% Similarity=0.049 Sum_probs=43.6
Q ss_pred ChhHHHHHHHHHhhCCCcccccceeeecCCC----cCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCC-CCcChhHH
Q 021290 165 GLDGLASRTAAYYQQGARFAKWRTVVSIPNG----PSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLD-GDHGIDRT 239 (314)
Q Consensus 165 GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~----Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~d-gdH~i~~c 239 (314)
.++.+.+.+....+.|+..-. +..... +...+....+..|.+.+.++++.|+.--+||---.. --++.+.+
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~----~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~ 157 (278)
T 1i60_A 82 IITEFKGMMETCKTLGVKYVV----AVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQA 157 (278)
T ss_dssp HHHHHHHHHHHHHHHTCCEEE----EECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEE----EecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHH
Confidence 345555544555556865321 111111 235555666666666666688999999999953211 12456666
Q ss_pred HHHHHHH
Q 021290 240 FEVAQKV 246 (314)
Q Consensus 240 ~~vte~V 246 (314)
.++.+.+
T Consensus 158 ~~l~~~~ 164 (278)
T 1i60_A 158 YEIVNTV 164 (278)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665554
No 33
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=21.62 E-value=75 Score=29.99 Aligned_cols=79 Identities=11% Similarity=0.136 Sum_probs=46.8
Q ss_pred cCChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCC---CCcChhHH
Q 021290 163 CQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLD---GDHGIDRT 239 (314)
Q Consensus 163 t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~d---gdH~i~~c 239 (314)
..|||++.+|++.|.+.||+ .|-+...|+...+ ..||++-. +|++= -+... ...+.+..
T Consensus 185 ~~gl~~ai~Ra~Ay~eAGAd------~i~~e~~~~~e~~----------~~i~~~l~-~P~la-n~~~~g~~~~~~~~eL 246 (318)
T 1zlp_A 185 PHGLEEGIRRANLYKEAGAD------ATFVEAPANVDEL----------KEVSAKTK-GLRIA-NMIEGGKTPLHTPEEF 246 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCS------EEEECCCCSHHHH----------HHHHHHSC-SEEEE-EECTTSSSCCCCHHHH
T ss_pred hcCHHHHHHHHHHHHHcCCC------EEEEcCCCCHHHH----------HHHHHhcC-CCEEE-EeccCCCCCCCCHHHH
Confidence 45899999999999999997 3445555663322 23466655 78742 11111 23344443
Q ss_pred --------------HHHHHHHHHHHHHHHHhCCc
Q 021290 240 --------------FEVAQKVWAEVFFYLAENNV 259 (314)
Q Consensus 240 --------------~~vte~VL~~vf~~L~~~~V 259 (314)
+..+-+.+.++++.|.++|-
T Consensus 247 ~~lGv~~v~~~~~~~raa~~a~~~~~~~l~~~g~ 280 (318)
T 1zlp_A 247 KEMGFHLIAHSLTAVYATARALVNIMKILKEKGT 280 (318)
T ss_dssp HHHTCCEEEECSHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHcCCeEEEEchHHHHHHHHHHHHHHHHHHHcCC
Confidence 23455555667777777653
No 34
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=20.82 E-value=1.7e+02 Score=27.82 Aligned_cols=93 Identities=10% Similarity=-0.110 Sum_probs=53.4
Q ss_pred ceeeeecCCCcccCCCCCCCCccCChhHHHHHHHHHhhCCCcccccceeeec-CCCcCHHHHHHHHHHHHHHHHHHHhCC
Q 021290 141 IVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVREAAWGLARYAAIAQDNG 219 (314)
Q Consensus 141 IvPGIKVDkGl~pl~g~~gE~~t~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i-~~~Ps~~aI~~na~~LAryAaicQ~~G 219 (314)
+=..||||.|.- .-|-...+.+..|.+++.++. | .-+.+-+... +...+...+.++...+.+.+.-.++.|
T Consensus 167 ~~V~l~VdtG~~----R~Gv~~~~e~~~l~~~i~~~~--~--~l~l~Gl~th~g~~~~~~~~~~~~~~l~~l~~~L~~~g 238 (426)
T 3gwq_A 167 LQVLLELGVPGG----RTGVRDAAQRNAVLEAITRYP--D--TLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQE 238 (426)
T ss_dssp EEEEEEECCTTS----SSSBCSHHHHHHHHHHHHTST--T--TEEEEEEEECGGGCCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCC----cCCCCCHHHHHHHHHHHHcCC--C--CEEEEeEEEEccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 445799999932 224332233555555554321 0 2345555555 233455566776667777766677888
Q ss_pred ceeeecceecCCCCcChhHHHH
Q 021290 220 LVPIVEPEILLDGDHGIDRTFE 241 (314)
Q Consensus 220 LVPIVEPEVl~dgdH~i~~c~~ 241 (314)
+..+=-|++-|-+..|.+.+.+
T Consensus 239 ~~~~~~~~lS~G~S~~~~~a~~ 260 (426)
T 3gwq_A 239 RFARAPAVLSGAGSAWYDVVAE 260 (426)
T ss_dssp CCSSSSEEEEECCSTTHHHHHH
T ss_pred CCCCCCCEEEecCChhHHHHHh
Confidence 6332235677888888876654
No 35
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=20.82 E-value=4.2e+02 Score=26.20 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHHhCCccccccccccccccCCCCCCCCCC-
Q 021290 204 AAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKAT- 282 (314)
Q Consensus 204 na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~~~~V~lEG~lLKPnMV~pG~~~~~~~s- 282 (314)
|...|..-+..+++.|+-|+|=..- ++| .+.+| -++++.+.+....++.-+ =+|-.++.|-+.+....
T Consensus 263 n~~al~AAa~~A~~~G~~~~il~~~-l~G-----earev-g~~~a~ia~~~~~~~~p~----~~P~~llsGGEtTVtv~G 331 (429)
T 2b8n_A 263 VQKVCDEAKSLAKEKGFNAEIITTS-LDC-----EAREA-GRFIASIMKEVKFKDRPL----KKPAALIFGGETVVHVKG 331 (429)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE-ECS-----BHHHH-HHHHHHHHHHHHHHCCSS----CSSEEEEEEECCBCCCCS
T ss_pred HHHHHHHHHHHHHHcCCeEEEecCC-Cce-----eHHHH-HHHHHHHHHHHHhcCCCC----CCCeEEEEcCCcEEEeCC
Confidence 3444444455688999987765442 222 23334 444666777766665322 24556666666554433
Q ss_pred ------hHHHHHHHHHHhhccCCCCCCceEEeec
Q 021290 283 ------PQQVAEYTLKLLHRRIPPAVPGIMAILV 310 (314)
Q Consensus 283 ------~eeVA~~Tv~~L~rtVP~avPGI~FLS~ 310 (314)
.+|.|-+-...|.. .+||+|||.
T Consensus 332 ~G~GGRNqElaL~~a~~l~g-----~~~v~~ls~ 360 (429)
T 2b8n_A 332 NGIGGRNQELALSAAIALEG-----IEGVILCSA 360 (429)
T ss_dssp CCCCCHHHHHHHHHHHHTTT-----CTTEEEEEE
T ss_pred CCCCchhHHHHHHHHHHhcC-----CCCeEEEEE
Confidence 67888777777754 369999985
No 36
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=20.40 E-value=2.8e+02 Score=23.30 Aligned_cols=52 Identities=12% Similarity=-0.066 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCceeeecceecCCCCcChhHHHHHHHHHHHHHHHHHH
Q 021290 200 AVREAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLA 255 (314)
Q Consensus 200 aI~~na~~LAryAaicQ~~GLVPIVEPEVl~dgdH~i~~c~~vte~VL~~vf~~L~ 255 (314)
...+++..+++. .++.|-+| ++=++..+|.|+-....+.....|.-+|+.|.
T Consensus 228 ~~~~~~~~~~~~---L~~~g~~~-~~~~~~~~g~H~~~~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 228 LTLRTNQTFRDT---YAADGGRN-GVFNFPPNGTHSWPYWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHHHH---HHHTTCCS-EEEECCSCCCSSHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhCCCCc-eEEEecCCCccChHHHHHHHHHHHHHHHHHhC
Confidence 345666666655 67888334 34444568999998888888888888888774
No 37
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=20.01 E-value=90 Score=28.65 Aligned_cols=75 Identities=17% Similarity=0.164 Sum_probs=45.7
Q ss_pred CChhHHHHHHHHHhhCCCcccccceeeecCCCcCHHHHHHHHHHHHHHHHHHHhCCceeeecceecCC-CCcChhHHH--
Q 021290 164 QGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVREAAWGLARYAAIAQDNGLVPIVEPEILLD-GDHGIDRTF-- 240 (314)
Q Consensus 164 ~GLDgL~~R~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LAryAaicQ~~GLVPIVEPEVl~d-gdH~i~~c~-- 240 (314)
.|+|++.+|++.|.+.||+ .|-+...|+...+ ..||++-. +|+. +++. +..+.+...
T Consensus 165 ~~~~~ai~Ra~ay~eAGAd------~i~~e~~~~~~~~----------~~i~~~~~-~P~n---~~~~~~~~~~~eL~~l 224 (275)
T 2ze3_A 165 ERLAETVRRGQAYADAGAD------GIFVPLALQSQDI----------RALADALR-VPLN---VMAFPGSPVPRALLDA 224 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCS------EEECTTCCCHHHH----------HHHHHHCS-SCEE---EECCTTSCCHHHHHHT
T ss_pred hhHHHHHHHHHHHHHCCCC------EEEECCCCCHHHH----------HHHHHhcC-CCEE---EecCCCCCCHHHHHHc
Confidence 3799999999999999998 4555555764432 23456555 6762 2222 234444432
Q ss_pred ------------HHHHHHHHHHHHHHHhCC
Q 021290 241 ------------EVAQKVWAEVFFYLAENN 258 (314)
Q Consensus 241 ------------~vte~VL~~vf~~L~~~~ 258 (314)
..+-+.+.++++.|.++|
T Consensus 225 Gv~~v~~~~~~~raa~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 225 GAARVSFGQSLMLATLGLVQRMAAELHAAE 254 (275)
T ss_dssp TCSEEECTTHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEChHHHHHHHHHHHHHHHHHHHhC
Confidence 344555566666666655
Done!