Your job contains 1 sequence.
>021291
MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS
AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK
EPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLN
TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN
PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFGIGFVCDQEGN
KFGTTWHIRHLNST
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021291
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123869 - symbol:EMB2757 "AT4G29860" species:3... 908 4.5e-91 1
DICTYBASE|DDB_G0289181 - symbol:gnb1l "guanine nucleotide... 177 4.0e-23 2
ZFIN|ZDB-GENE-050320-77 - symbol:gnb1l "guanine nucleotid... 155 1.6e-18 2
MGI|MGI:1338057 - symbol:Gnb1l "guanine nucleotide bindin... 164 6.1e-12 2
RGD|1594165 - symbol:Gnb1l "guanine nucleotide binding pr... 162 2.9e-11 2
UNIPROTKB|F1NF00 - symbol:GNB1L "Uncharacterized protein"... 176 3.3e-11 1
UNIPROTKB|Q9BYB4 - symbol:GNB1L "Guanine nucleotide-bindi... 154 1.3e-08 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 141 3.4e-07 1
UNIPROTKB|F1MBU4 - symbol:GNB1L "Uncharacterized protein"... 140 5.2e-07 1
UNIPROTKB|F1RK57 - symbol:GNB1L "Uncharacterized protein"... 130 1.1e-06 2
DICTYBASE|DDB_G0277471 - symbol:DDB_G0277471 "putative pr... 126 1.4e-06 2
UNIPROTKB|Q92636 - symbol:NSMAF "Protein FAN" species:960... 104 2.1e-06 2
FB|FBgn0044323 - symbol:Cka "Connector of kinase to AP-1"... 95 6.1e-06 2
MGI|MGI:1341864 - symbol:Nsmaf "neutral sphingomyelinase ... 99 1.2e-05 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 116 1.8e-05 2
UNIPROTKB|A4RJA0 - symbol:asa1 "ASTRA-associated protein ... 98 2.5e-05 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 112 3.7e-05 2
RGD|727868 - symbol:Nsmaf "neutral sphingomyelinase (N-SM... 96 5.3e-05 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 108 5.6e-05 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 116 5.7e-05 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 112 6.4e-05 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 112 6.4e-05 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 112 6.4e-05 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 112 6.4e-05 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 112 6.4e-05 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 112 6.4e-05 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 112 6.4e-05 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 112 6.4e-05 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 112 6.4e-05 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 112 6.4e-05 2
ZFIN|ZDB-GENE-050417-342 - symbol:nsmaf "neutral sphingom... 91 9.0e-05 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 113 9.9e-05 2
CGD|CAL0002491 - symbol:DIP2 species:5476 "Candida albica... 126 0.00011 1
UNIPROTKB|Q5A756 - symbol:DIP2 "Putative uncharacterized ... 126 0.00011 1
ZFIN|ZDB-GENE-110411-237 - symbol:kif21a "kinesin family ... 104 0.00016 2
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 99 0.00023 2
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 102 0.00024 2
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 102 0.00024 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 84 0.00030 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 116 0.00035 1
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 84 0.00036 3
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 82 0.00043 3
UNIPROTKB|Q148I1 - symbol:PAAF1 "Proteasomal ATPase-assoc... 80 0.00062 2
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 99 0.00070 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 99 0.00070 3
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00076 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00077 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 113 0.00077 1
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 118 0.00084 1
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 82 0.00084 3
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 113 0.00096 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 112 0.0010 1
>TAIR|locus:2123869 [details] [associations]
symbol:EMB2757 "AT4G29860" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048700 "acquisition of desiccation
tolerance in seed" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009790 GO:GO:0080008 GO:GO:0048700 HOGENOM:HOG000007056
OMA:HEEPVMD EMBL:AB191306 IPI:IPI00537829 RefSeq:NP_194715.2
UniGene:At.31884 ProteinModelPortal:Q3MV14 SMR:Q3MV14 STRING:Q3MV14
PRIDE:Q3MV14 EnsemblPlants:AT4G29860.1 GeneID:829108
KEGG:ath:AT4G29860 TAIR:At4g29860 InParanoid:Q3MV14
PhylomeDB:Q3MV14 ProtClustDB:CLSN2680996 Genevestigator:Q3MV14
Uniprot:Q3MV14
Length = 386
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 177/296 (59%), Positives = 224/296 (75%)
Query: 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
MSKRPPP DPVAVLRGHR SV DV FH +K +LF G+ GELRIWDT+QHR VSS+W HS
Sbjct: 1 MSKRPPP-DPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Query: 61 AAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK 120
A+G+++VA P +G +K+ISQGRDGTVKCWDIE+GGLS +P L ++T +YHFCK SLVK
Sbjct: 60 RANGVLAVAASPWLGEDKIISQGRDGTVKCWDIEDGGLSRDPLLILETCAYHFCKFSLVK 119
Query: 121 EPYANAKQA-NEPKDCYEREVGETVDTDSLCDSK----------DDVPAEGPKYMAVAGE 169
+P + ++A + + C E++ G+T + DS+ D AEG ++AV GE
Sbjct: 120 KPKNSLQEAESHSRGCDEQDGGDTCNVQIADDSERSEEDSGLLQDKDHAEGTTFVAVVGE 179
Query: 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229
Q +EVEIWDLNT ++ +L Q+S SPN S+KGRGMCMAVQ + P +SQGF++VLAGYE
Sbjct: 180 QPTEVEIWDLNTGDKIIQLPQSSPDESPNASTKGRGMCMAVQLFCPPESQGFLHVLAGYE 239
Query: 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285
DGSIL+WDIRN IPLT++K H EPVL LS+ SC+GGISGGAD KIV+YNL+HST
Sbjct: 240 DGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNHST 295
>DICTYBASE|DDB_G0289181 [details] [associations]
symbol:gnb1l "guanine nucleotide-binding protein
subunit beta-like protein 1" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289181
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000131 RefSeq:XP_636324.1
ProteinModelPortal:Q54HW5 EnsemblProtists:DDB0267049 GeneID:8626997
KEGG:ddi:DDB_G0289181 OMA:RTHKESA ProtClustDB:CLSZ2846642
Uniprot:Q54HW5
Length = 359
Score = 177 (67.4 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK-------SQGFVNV 224
S+VEIWDL + +L N+ K G+ M+++ Y ++ S + +
Sbjct: 156 SQVEIWDLKNKQVINKLKPNN----QQLFEK-LGLPMSLKLYYENENNDNSNQSNDQIRL 210
Query: 225 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284
GYE+G +L+WD+RN IPL + K+H EP+L ++ + GISG D I+ +N+++
Sbjct: 211 CTGYENGELLIWDLRNTSIPLVSSKLHNEPILSFALSNNSTKGISGSGDTNIIEFNINYE 270
Query: 285 T 285
+
Sbjct: 271 S 271
Score = 150 (57.9 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 8 PDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAA--HG 64
PDP +LRGH+ +V V F + P +L++G+ GEL++W+ + + +S+ HS G
Sbjct: 13 PDPYYILRGHKFNVNSVLFDKVNPNLLYSGSGDGELKLWNIEEKKCISTQIAHSEGIGGG 72
Query: 65 IVSVATGPSIGLNK-----------VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF 113
++S+ + N+ ++SQGRDG +K W I + N + ++TNS
Sbjct: 73 VLSLQWLSNDNNNENNNNNDEICGNILSQGRDGVIKIWSIIDNCTFKN-TYRLETNSLSL 131
Query: 114 CKLS 117
K S
Sbjct: 132 GKCS 135
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 223 NVLA-GYEDGSILVWDI 238
N+LA G +D I +WDI
Sbjct: 338 NILASGSKDCKIALWDI 354
>ZFIN|ZDB-GENE-050320-77 [details] [associations]
symbol:gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050320-77
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:54584 HOVERGEN:HBG051745 EMBL:BC090490
IPI:IPI00555398 RefSeq:NP_001013526.1 UniGene:Dr.81918
ProteinModelPortal:Q5BLC9 STRING:Q5BLC9 DNASU:541381 GeneID:541381
KEGG:dre:541381 InParanoid:Q5BLC9 NextBio:20879193 Uniprot:Q5BLC9
Length = 323
Score = 155 (59.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 6 PPPDPVAVLRGHRASVTDV---CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
PPPDP+ +LRG ASV + C P+L++G+ G + +W+ R H A
Sbjct: 4 PPPDPLYILRGSGASVNALHFCCDGDGPPLLYSGSGKGAVHVWNLSTRRAERVLESH-AG 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ ++ + T + + +ISQGRD V WD+ G + SL T S FC+ SL+
Sbjct: 63 NSVIWLNTFNN-SRSCLISQGRDMRVCVWDLSEGRSAVTDSL--HTGSVGFCQCSLLGSR 119
Query: 123 YANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155
+ A+ + E V E +C K D
Sbjct: 120 LGSTLLAHPTQHMEEVSVVEMSSWTQVCSLKPD 152
Score = 130 (50.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 205 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC 264
GM M+++ + G V + AGYEDGS+++WD+ + P + +KVH EPV+ L +D
Sbjct: 156 GMLMSMKMW--QADSGPV-LCAGYEDGSVVLWDVSHRR-PFSLLKVHPEPVMSLDVDVCR 211
Query: 265 NGGISGGADQKIVLYNLDH 283
GISG ++ + + LD+
Sbjct: 212 QKGISGSSENILQSWRLDN 230
>MGI|MGI:1338057 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G
protein), beta polypeptide 1-like" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035176 "social behavior"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1338057 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035176 CTD:54584
HOGENOM:HOG000007056 HOVERGEN:HBG051745 OMA:HEEPVMD
OrthoDB:EOG4GF3FM EMBL:AF301595 EMBL:AK010489 EMBL:AK016952
EMBL:BC024635 EMBL:BC037676 IPI:IPI00221803 IPI:IPI00308210
RefSeq:NP_001075151.1 RefSeq:NP_075609.2 UniGene:Mm.236139
ProteinModelPortal:Q9EQ15 SMR:Q9EQ15 STRING:Q9EQ15
PhosphoSite:Q9EQ15 PRIDE:Q9EQ15 Ensembl:ENSMUST00000090086
Ensembl:ENSMUST00000115600 Ensembl:ENSMUST00000167778 GeneID:13972
KEGG:mmu:13972 GeneTree:ENSGT00390000018606 NextBio:284846
Bgee:Q9EQ15 Genevestigator:Q9EQ15 GermOnline:ENSMUSG00000000884
Uniprot:Q9EQ15
Length = 326
Score = 164 (62.8 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 61/223 (27%), Positives = 105/223 (47%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF---HQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F Q P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPGPRFVLRGTQSAVNTLHFCPPSQAAGNPLLFSGSQNGLVHIWSLQTRRIVTTLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G++ + T P G ++++SQGRD + WD+E G + S ++ +S FC+ S++
Sbjct: 66 GG-QGVIWLKTLPQ-G-HQLLSQGRDLRLCLWDLEEGRNTIMDS--VQLDSVGFCRGSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE-G-P------------KYMA 165
A K E ++ E S+C K + A G P + +
Sbjct: 121 VRGQQCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADARPGMPMCLGLWQTNSSLRPLL 180
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDISERKVCSQITCHEEPVMGLDFDSQKAKGI 223
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 142 ETVDTDSLCDSKDDVPAEGPK--YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF 199
++V DS+ + + G + +AV G+ EV+I ++ + + C P
Sbjct: 105 DSVQLDSVGFCRGSILVRGQQCWMLAVPGKGSDEVQILEMPSKT-------SVCTLKPEA 157
Query: 200 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 259
++ GM M + + + S + +LAGYEDGS+ +WDI + + + H EPV+ L
Sbjct: 158 DARP-GMPMCLGLWQTNSSLRPL-LLAGYEDGSVTLWDISERKV-CSQITCHEEPVMGLD 214
Query: 260 IDESCNGGISGGADQKIVLYNLD 282
D GISG A + + +++LD
Sbjct: 215 FDSQKAKGISGSAGKVLAVWSLD 237
Score = 56 (24.8 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 226 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNL 281
AG+ D I V+ R PL + H PV C++ + +G ++ G+ DQ+I +++L
Sbjct: 270 AGW-DHRIRVFHWRTMK-PLAVLAFHSAPVYCVAF--AADGLLAAGSKDQRISIWSL 322
>RGD|1594165 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G protein),
beta polypeptide 1-like" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0035176 "social behavior"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1594165 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:54584 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 IPI:IPI00959938 RefSeq:XP_001057185.3
RefSeq:XP_002724806.2 ProteinModelPortal:D4A2F0
Ensembl:ENSRNOT00000002596 GeneID:680266 KEGG:rno:680266
ArrayExpress:D4A2F0 Uniprot:D4A2F0
Length = 326
Score = 162 (62.1 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 59/223 (26%), Positives = 101/223 (45%)
Query: 5 PPPPDPVAVLRGHRASVTDVCFHQT-----KPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPP P VLRG +++V + F P+LF+G+ G + IW R V++ H
Sbjct: 6 PPPPSPRFVLRGTQSAVNTLHFCPAPGAAENPLLFSGSQNGLVHIWSLQTRRIVATLNGH 65
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
G+ + T P G +++SQGRD + WD+ G + S ++ +S FCK S++
Sbjct: 66 GG-QGVTWLKTLPQ-G-QQLLSQGRDPRLCLWDLAEGRNTVMDS--VQLDSVGFCKSSIL 120
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLC------DSKDDVPA--------EGPKYMA 165
A K E ++ E S+C D+K +P + +
Sbjct: 121 VRGQLCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADAKPGMPMCLGLWQTNSSLRPLL 180
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+++ H+ G S K +G+
Sbjct: 181 LAGYEDGSVTLWDVSERKVCSQITCHEEPVMGLDFDSQKAKGV 223
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 140 VGETVDTDSLCDSKDDVPAEGPK--YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSP 197
V ++V DS+ K + G +AV G+ EV+I ++ + + C P
Sbjct: 103 VMDSVQLDSVGFCKSSILVRGQLCWMLAVPGKGSDEVQILEMPSKT-------SVCTLKP 155
Query: 198 NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC 257
+K GM M + + + S + +LAGYEDGS+ +WD+ + + + H EPV+
Sbjct: 156 EADAKP-GMPMCLGLWQTNSSLRPL-LLAGYEDGSVTLWDVSERKV-CSQITCHEEPVMG 212
Query: 258 LSIDESCNGGISGGADQKIVLYNLD 282
L D G+SG A + + +++LD
Sbjct: 213 LDFDSQKAKGVSGSAGKVLAVWSLD 237
Score = 52 (23.4 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 244 PLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNL 281
PL + H PV C++ + +G ++ G+ DQ+I +++L
Sbjct: 286 PLAVLAFHSAPVHCVAF--AADGLLAAGSKDQRISVWSL 322
>UNIPROTKB|F1NF00 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:AADN02034786 IPI:IPI00587443
Ensembl:ENSGALT00000002979 Uniprot:F1NF00
Length = 328
Score = 176 (67.0 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 64/223 (28%), Positives = 100/223 (44%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS 60
PPPDP VLRG A+V + F P+LF+G+ G + +W+ HR ++
Sbjct: 4 PPPDPHFVLRGTGAAVHALHFSCGGGEPDIPVLFSGSENGFIHVWNLKTHRVDAAL---- 59
Query: 61 AAHGIVSVATGPSI-GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
HG SV ++ G +++SQGRD + WD+ G S S + T + FC+ SL+
Sbjct: 60 DGHGRKSVCGLKTMDGKERLLSQGRDQRICLWDLAEGRTSVTDS--VFTENVGFCRCSLL 117
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE--------------GPKYMA 165
K A K E +V E S+C K +V A+ G +
Sbjct: 118 KVAEGRWLMATAAKALEEVQVLELPSKTSVCTLKPEVGAKLGMPMCLKLWQGSCGSQPSL 177
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +W+L+T + ++L HQ S K +G+
Sbjct: 178 LAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSEKAKGI 220
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/126 (33%), Positives = 70/126 (55%)
Query: 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS- 216
AEG MA A + L EV++ +L + + C P +K GM M ++ + S
Sbjct: 120 AEGRWLMATAAKALEEVQVLELPSKT-------SVCTLKPEVGAK-LGMPMCLKLWQGSC 171
Query: 217 KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI 276
SQ ++LAGYEDGS+L+W++ + G L+ + H EPV+ L D GISG +++ +
Sbjct: 172 GSQP--SLLAGYEDGSVLLWNL-STGKVLSQLICHQEPVMSLDFDSEKAKGISGSSEKVL 228
Query: 277 VLYNLD 282
+++L+
Sbjct: 229 SIWSLN 234
>UNIPROTKB|Q9BYB4 [details] [associations]
symbol:GNB1L "Guanine nucleotide-binding protein subunit
beta-like protein 1" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=NAS] [GO:0035556 "intracellular signal transduction"
evidence=NAS] [GO:0009898 "internal side of plasma membrane"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
GO:GO:0007186 GO:GO:0035176 GO:GO:0009898 UniGene:Hs.105642
EMBL:AF238328 EMBL:AF301895 EMBL:AY007378 EMBL:AB049212
EMBL:AB051432 EMBL:CR456496 EMBL:BC012060 IPI:IPI00107339
IPI:IPI00218734 RefSeq:NP_443730.1 ProteinModelPortal:Q9BYB4
SMR:Q9BYB4 IntAct:Q9BYB4 STRING:Q9BYB4 PhosphoSite:Q9BYB4
DMDM:27151507 PaxDb:Q9BYB4 PeptideAtlas:Q9BYB4 PRIDE:Q9BYB4
DNASU:54584 Ensembl:ENST00000329517 Ensembl:ENST00000403325
Ensembl:ENST00000405009 GeneID:54584 KEGG:hsa:54584 UCSC:uc002zqf.1
CTD:54584 GeneCards:GC22M019770 HGNC:HGNC:4397 HPA:HPA034627
HPA:HPA034628 MIM:610778 neXtProt:NX_Q9BYB4 PharmGKB:PA28777
HOGENOM:HOG000007056 HOVERGEN:HBG051745 InParanoid:Q9BYB4
OMA:HEEPVMD OrthoDB:EOG4GF3FM GenomeRNAi:54584 NextBio:57105
ArrayExpress:Q9BYB4 Bgee:Q9BYB4 CleanEx:HS_GNB1L
Genevestigator:Q9BYB4 GermOnline:ENSG00000185838 Uniprot:Q9BYB4
Length = 327
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 5 PPPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH 59
PPPPDP VLRG ++ V + F Q +P+LF+G+ G + IW R V++ H
Sbjct: 7 PPPPDPQFVLRGTQSPVHALHFCEGAQAQGRPLLFSGSQSGLVHIWSLQTRRAVTTLDGH 66
Query: 60 SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119
+ + T P G +++SQGRD + WD+ G + S+ ++ S FC+ S++
Sbjct: 67 GG-QCVTWLQTLPQ-G-RQLLSQGRDLKLCLWDLAEGRSAVVDSVCLE--SVGFCRSSIL 121
Query: 120 KEPYANAKQANEPKDCYEREVGETVDTDSLC------DSKDDVP-------AE-GPKYMA 165
A + E ++ E S+C D+K +P A+ + +
Sbjct: 122 AGGQPRWTLAVPGRGSDEVQILEMPSKTSVCALKPKADAKLGMPMCLRLWQADCSSRPLL 181
Query: 166 VAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
+AG + V +WD++ + C+R+ H+ S K RG+
Sbjct: 182 LAGYEDGSVVLWDVSEQKVCSRIACHEEPVMDLDFDSQKARGI 224
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/165 (29%), Positives = 83/165 (50%)
Query: 128 QANEPKDC-YEREVGETVDTDSLC-DS----KDDVPAEG-PKY-MAVAGEQLSEVEIWDL 179
Q + K C ++ G + DS+C +S + + A G P++ +AV G EV+I ++
Sbjct: 86 QGRDLKLCLWDLAEGRSAVVDSVCLESVGFCRSSILAGGQPRWTLAVPGRGSDEVQILEM 145
Query: 180 NTAERCTRLHQNSCGGSPNFSSK-GRGMCMAV-QAYLPSKSQGFVNVLAGYEDGSILVWD 237
+ + C P +K G MC+ + QA S+ +LAGYEDGS+++WD
Sbjct: 146 PSKT-------SVCALKPKADAKLGMPMCLRLWQADCSSRPL----LLAGYEDGSVVLWD 194
Query: 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282
+ + + + H EPV+ L D GISG A + + +++LD
Sbjct: 195 VSEQKV-CSRIACHEEPVMDLDFDSQKARGISGSAGKALAVWSLD 238
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 4 RPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH 63
R P+PVA GHR +VT V F Q + + G +++WD V+ ++ ++ H+A
Sbjct: 61 RTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWD-VRSPSIPRNYKHNAP- 118
Query: 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY 123
+ V P+ G ++IS RDG ++ WD+ G LT + ++ LS+ +
Sbjct: 119 -VNEVVIHPNQG--ELISCDRDGNIRIWDL--GENQCTHQLTPEDDT-SLQSLSMASDGS 172
Query: 124 ANAKQANEPKDCYEREVGETVDTDSL 149
A AN +CY E+ D L
Sbjct: 173 MLAA-ANTKGNCYVWEMPNHTDASHL 197
>UNIPROTKB|F1MBU4 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 EMBL:DAAA02045774 EMBL:DAAA02045775
EMBL:DAAA02045776 IPI:IPI00710706 ProteinModelPortal:F1MBU4
Ensembl:ENSBTAT00000029367 Uniprot:F1MBU4
Length = 321
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 44/145 (30%), Positives = 78/145 (53%)
Query: 140 VGETVDTDSLCDSKDDVPAEGPK--YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSP 197
V + V +S+ + V AEGP+ +AV G EV++ +L + T + SC P
Sbjct: 98 VVDAVHLESVGFCRASVLAEGPQRWMLAVPGRGSDEVQVLELPSK---TSV---SCL-KP 150
Query: 198 NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC 257
++ GM M +Q + S + +LAGYEDGS+ +WD+ + + + H EPV+
Sbjct: 151 EAGAR-LGMPMCLQLWQAESSPRPL-LLAGYEDGSLALWDVSARKV-CSRVACHSEPVMA 207
Query: 258 LSIDESCNGGISGGADQKIVLYNLD 282
L++D G+SG A++ + +++L+
Sbjct: 208 LALDPRRARGVSGSAEKVLAVWSLE 232
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 53/209 (25%), Positives = 97/209 (46%)
Query: 6 PPPDPVAVLRGHRASVTDVCF-H--QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA 62
P P+P VLRG R++V + F H Q P+L +G+ G + +W R +++ H
Sbjct: 4 PVPNPQFVLRGARSAVHALHFCHGAQGHPLLLSGSLRGLVHVWSLQTRRPLAALDGHGG- 62
Query: 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP 122
+ + T P G +++SQGRD + WD+ G + ++ ++ S FC+ S++ E
Sbjct: 63 QCVTWLHTLPQ-G-PQLLSQGRDLQLCVWDLAEGRNAVVDAVHLE--SVGFCRASVLAEG 118
Query: 123 YANAKQANEPKDCYEREVGETVDTDSLCDSKDD------VP-------AEG-PKYMAVAG 168
A + E +V E S+ K + +P AE P+ + +AG
Sbjct: 119 PQRWMLAVPGRGSDEVQVLELPSKTSVSCLKPEAGARLGMPMCLQLWQAESSPRPLLLAG 178
Query: 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSP 197
+ + +WD++ + C+R+ +C P
Sbjct: 179 YEDGSLALWDVSARKVCSRV---ACHSEP 204
>UNIPROTKB|F1RK57 [details] [associations]
symbol:GNB1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035176 "social behavior" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035176 CTD:54584
GeneTree:ENSGT00390000018606 EMBL:CT737290 RefSeq:NP_001230384.1
UniGene:Ssc.11798 UniGene:Ssc.79225 ProteinModelPortal:F1RK57
Ensembl:ENSSSCT00000011091 GeneID:100153889 KEGG:ssc:100153889
OMA:WDGRIRI Uniprot:F1RK57
Length = 293
Score = 130 (50.8 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 159 EGPKYMAVAGEQLSEVEIWDL----NTAERCTRLHQ-NSCGGSPNFSSKGRGMCMAVQAY 213
+GP+ ++ G L ++ +WDL NT L C GS + R M +AV
Sbjct: 78 QGPQLLS-QGRDL-KLCLWDLAEGRNTVVDSVHLESVGFCRGSILAGGQPRWM-LAVPGS 134
Query: 214 LPSKSQGFVN--VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 271
++ +LAGYEDGS+ +WD+ + + + H EPV+ L +D G+SG
Sbjct: 135 GSDEANSSPRPLLLAGYEDGSVALWDVSEQKV-CSRIACHTEPVMGLDVDSQKARGVSGS 193
Query: 272 ADQKIVLYNLD 282
A++ + ++++D
Sbjct: 194 AEKALAVWSVD 204
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 1 MSKRP-PPPDPVAVLRGHRASVTDVCF-----HQTKPILFAGTTGGELRIWDTVQHRTVS 54
M+ P PPPDP VLRG +++V + F Q P+L +G+ G + IW R V+
Sbjct: 1 MADLPLPPPDPQFVLRGTQSAVHALHFCGGAQGQGCPLLLSGSLRGLVHIWSLQTRRVVA 60
Query: 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFC 114
+ H + + T P G +++SQGRD + WD+ G + S+ ++ S FC
Sbjct: 61 TLDGHGG-QCVTWLQTLPQ-G-PQLLSQGRDLKLCLWDLAEGRNTVVDSVHLE--SVGFC 115
Query: 115 KLSLV 119
+ S++
Sbjct: 116 RGSIL 120
Score = 63 (27.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 152 SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL--HQNSCGGSPNFSSKGRGM 206
S D P+ + +AG + V +WD++ + C+R+ H G S K RG+
Sbjct: 134 SGSDEANSSPRPLLLAGYEDGSVALWDVSEQKVCSRIACHTEPVMGLDVDSQKARGV 190
>DICTYBASE|DDB_G0277471 [details] [associations]
symbol:DDB_G0277471 "putative proteasomal
ATPase-associated factor" species:44689 "Dictyostelium discoideum"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000020 GO:GO:0000502 KO:K11887
RefSeq:XP_642666.1 ProteinModelPortal:Q8MYE8
EnsemblProtists:DDB0169267 GeneID:8621083 KEGG:ddi:DDB_G0277471
OMA:IHHIKAN ProtClustDB:CLSZ2729134 Uniprot:Q8MYE8
Length = 425
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 39/129 (30%), Positives = 59/129 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V F + ++ +G++ L+IWD ++ S+ H GI S A+
Sbjct: 141 LDGHVGDVDLAMFFPSGRVILSGSSDSRLKIWDAIEGTCASTLVGHIG--GITS-ASLVD 197
Query: 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEP 132
G N ++S RDGT K WDI + SN + + + F SL+ P +N+
Sbjct: 198 RGRN-LVSCSRDGTSKLWDIPTSSIISNLTKLSRPINDSFIASSLLDSIPTTTTTNSNDN 256
Query: 133 KDCYEREVG 141
EREVG
Sbjct: 257 NKVDEREVG 265
Score = 53 (23.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255
++ G +GSI WD RN P ++ P+
Sbjct: 319 IIGGDHNGSIYFWDKRNLNSPFCRLQFTNSPI 350
>UNIPROTKB|Q92636 [details] [associations]
symbol:NSMAF "Protein FAN" species:9606 "Homo sapiens"
[GO:0005057 "receptor signaling protein activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006672 "ceramide
metabolic process" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 GO:GO:0005737 GO:GO:0006672 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0005057
Pathway_Interaction_DB:tnfpathway InterPro:IPR004182 SMART:SM00568
EMBL:CH471068 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 EMBL:X96586 EMBL:AK294009
EMBL:AC068522 EMBL:AC092700 EMBL:BC041124 IPI:IPI00328260
RefSeq:NP_001138244.1 RefSeq:NP_003571.2 UniGene:Hs.372000
ProteinModelPortal:Q92636 SMR:Q92636 IntAct:Q92636
MINT:MINT-2813141 STRING:Q92636 PhosphoSite:Q92636 DMDM:209572614
PaxDb:Q92636 PRIDE:Q92636 Ensembl:ENST00000038176
Ensembl:ENST00000427130 GeneID:8439 KEGG:hsa:8439 UCSC:uc003xtt.3
CTD:8439 GeneCards:GC08M059496 H-InvDB:HIX0007527 HGNC:HGNC:8017
HPA:HPA023067 HPA:HPA023148 HPA:HPA023151 MIM:603043
neXtProt:NX_Q92636 PharmGKB:PA31795 HOGENOM:HOG000231605
HOVERGEN:HBG005639 InParanoid:Q92636 OMA:DKNRFQS OrthoDB:EOG4M91QQ
PhylomeDB:Q92636 ChiTaRS:NSMAF GenomeRNAi:8439 NextBio:31574
ArrayExpress:Q92636 Bgee:Q92636 CleanEx:HS_NSMAF
Genevestigator:Q92636 GermOnline:ENSG00000035681 Uniprot:Q92636
Length = 917
Score = 104 (41.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282
+VL+G + G +LVWD+ I ++ H V C+ ++E C+ I+GG D++I+ + L
Sbjct: 858 SVLSGSQSGELLVWDLLGAKIS-ERIQGHTGAVTCIWMNEQCSSIITGGEDRQIIFWKLQ 916
Query: 283 H 283
+
Sbjct: 917 Y 917
Score = 84 (34.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D +A L H SV + + +L +GT G + IWD + HS GIV
Sbjct: 755 DLLAELE-HDVSVDTISLNAASTLLVSGTKEGTVNIWDLTTATLMHQIPCHS---GIVC- 809
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
T S V+S G DG + D++ G L S+
Sbjct: 810 DTAFSPDSRHVLSTGTDGCLNVIDVQTGMLISS 842
Score = 72 (30.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH----SAAHGIVSVA 69
L GH +V+ +C+H + L++ + +++W V + H + VSV
Sbjct: 710 LMGHDDAVSKICWHDNR--LYSASWDSTVKVWSGVPAEMPGTKRHHFDLLAELEHDVSVD 767
Query: 70 TGPSIGLNK----VISQGRDGTVKCWDIENGGL 98
T I LN ++S ++GTV WD+ L
Sbjct: 768 T---ISLNAASTLLVSGTKEGTVNIWDLTTATL 797
Score = 61 (26.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 152 SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC 193
S D + + V+G + V IWDL TA T +HQ C
Sbjct: 765 SVDTISLNAASTLLVSGTKEGTVNIWDLTTA---TLMHQIPC 803
>FB|FBgn0044323 [details] [associations]
symbol:Cka "Connector of kinase to AP-1" species:7227
"Drosophila melanogaster" [GO:0007254 "JNK cascade"
evidence=NAS;TAS] [GO:0007391 "dorsal closure"
evidence=IMP;NAS;TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0042051 "compound eye photoreceptor development"
evidence=IMP] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007254 GO:GO:0007391 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046330 GO:GO:0072686
InterPro:IPR013258 Pfam:PF08232 EMBL:AF011332
ProteinModelPortal:Q86M30 SMR:Q86M30 STRING:Q86M30 PaxDb:Q86M30
PRIDE:Q86M30 FlyBase:FBgn0044323 InParanoid:Q86M30
OrthoDB:EOG4HX3G4 ArrayExpress:Q86M30 Bgee:Q86M30 Uniprot:Q86M30
Length = 730
Score = 95 (38.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 35/114 (30%), Positives = 52/114 (45%)
Query: 176 IWDLNTAERCTRLH--QNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233
++D T ++ RL Q G + F +K + LP + + A +ED I
Sbjct: 591 VYDTETGKQVVRLEAAQEMSGNTGKFINK-----VVSHPTLP------ITITA-HEDRHI 638
Query: 234 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287
WD G + +M HLEPV L++D +SG D I L+NLD+ T V
Sbjct: 639 RFWD-NTSGTLVHSMVAHLEPVTSLAVDAHGLYLLSGSHDCSIRLWNLDNKTCV 691
Score = 87 (35.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWD---TVQHRTVSSSWVHSA----AHGIV 66
LR H V + FH +P+L + L++W+ TVQ + +S V AH
Sbjct: 411 LRSHFDGVRSLIFHPEEPVLITASEDHTLKLWNLQKTVQAKKSASLDVEPLYTFRAHTGP 470
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDI 93
+ G S S G DG ++CW +
Sbjct: 471 VLCLGMSSSGETCYSGGLDGNIECWQL 497
>MGI|MGI:1341864 [details] [associations]
symbol:Nsmaf "neutral sphingomyelinase (N-SMase) activation
associated factor" species:10090 "Mus musculus" [GO:0005123 "death
receptor binding" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0016230 "sphingomyelin
phosphodiesterase activator activity" evidence=ISO] [GO:0043085
"positive regulation of catalytic activity" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341864 Pfam:PF02893 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH466538 InterPro:IPR004182
SMART:SM00568 GO:GO:0005123 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 GeneTree:ENSGT00670000097747
EMBL:AL772306 CTD:8439 HOGENOM:HOG000231605 HOVERGEN:HBG005639
OMA:DKNRFQS OrthoDB:EOG4M91QQ ChiTaRS:NSMAF EMBL:AF013632
EMBL:BX510318 EMBL:BC145961 EMBL:BC145963 IPI:IPI00265718
RefSeq:NP_035075.2 UniGene:Mm.3059 ProteinModelPortal:O35242
SMR:O35242 STRING:O35242 PhosphoSite:O35242 PaxDb:O35242
PRIDE:O35242 Ensembl:ENSMUST00000029910 GeneID:18201 KEGG:mmu:18201
InParanoid:A2AKK1 NextBio:293572 Bgee:O35242 Genevestigator:O35242
GermOnline:ENSMUSG00000028245 Uniprot:O35242
Length = 920
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282
+VL+G G +LVWD+ + ++ H V C+ ++E C+ I+GG D++I+ + L
Sbjct: 861 SVLSGSRSGELLVWDLLGAKVS-ERIQGHTGAVTCMWMNEQCSSIITGGEDRQIMFWKLQ 919
Query: 283 H 283
+
Sbjct: 920 Y 920
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D +A L H SV + + +L +GT G + IWD + + HS +
Sbjct: 758 DLLAELE-HDVSVNTINLNAVSTLLVSGTKEGMVNIWDLTTATLLHQTSCHSGT--VCDA 814
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
A P ++S G DG + D++ G L S+
Sbjct: 815 AFSPDS--RHILSTGVDGCLNVIDVQTGMLISS 845
Score = 69 (29.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-----WVHSAAHGIVSV 68
L GH +V+ +C+H + L++G+ +++W V + + H VSV
Sbjct: 713 LMGHDDAVSKICWHNDR--LYSGSWDSTVKVWSGVPAEMPGTKRHQFDLLAELEHD-VSV 769
Query: 69 ATGPSIGLNKV----ISQGRDGTVKCWDIENGGL 98
T I LN V +S ++G V WD+ L
Sbjct: 770 NT---INLNAVSTLLVSGTKEGMVNIWDLTTATL 800
Score = 65 (27.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSC 193
+ V+G + V IWDL TA T LHQ SC
Sbjct: 780 LLVSGTKEGMVNIWDLTTA---TLLHQTSC 806
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 116 (45.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F T +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 53 (23.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDFKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|A4RJA0 [details] [associations]
symbol:asa1 "ASTRA-associated protein 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016568 EMBL:CM001232 RefSeq:XP_003714908.1
ProteinModelPortal:A4RJA0 EnsemblFungi:MGG_01888T0 GeneID:2679563
KEGG:mgr:MGG_01888 OrthoDB:EOG46DQBT Uniprot:A4RJA0
Length = 469
Score = 98 (39.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/87 (29%), Positives = 40/87 (45%)
Query: 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIV 66
P P ++LRGH+A V F + L G G + +WD R + W AH V
Sbjct: 12 PAHPRSILRGHKAQVHAAAFVRNNERLVTGDADGFVVVWDLTIMRP-RAVW---RAHDDV 67
Query: 67 SVATGPSIGLNKVISQGRDGTVKCWDI 93
+ G G +++I+ GRD + W +
Sbjct: 68 LLGIG-GWGTDRLITHGRDNKLIVWQL 93
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 45/174 (25%), Positives = 73/174 (41%)
Query: 117 SLVKEPYANAKQANEPKD--CYEREVGETVD--TDSLCD-SKDDVPAEGPKYMAVAGEQL 171
SL K + + PK Y E+ T++ T SLC+ S D + + +AV
Sbjct: 100 SLAKTLPVDPAAEDRPKPWLLYMLEIS-TMNFCTFSLCEMSSDPLSEDREALIAVPNTLS 158
Query: 172 SE-VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230
SE ++I+ L + +R H G S GM MA++ + + G+ V GYE+
Sbjct: 159 SEAIDIFHLPSQKR---EHTIRLGQS-------EGMVMALELF---RVDGYFTVAVGYEN 205
Query: 231 GSILV-WDIRNPGIPLTAM------KVHLEPVLCLSIDESCNGGISGGADQKIV 277
G LV P+ K H +PVL L + + ++ AD ++
Sbjct: 206 GVALVAQQAERSETPVGTWNVRYRSKAHTQPVLSLDVSLGRDFFLTSSADSLLI 259
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 112 (44.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 138
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 139 -G-DHIVSASRDKTIKMWEVQTG 159
Score = 52 (23.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 288 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
>RGD|727868 [details] [associations]
symbol:Nsmaf "neutral sphingomyelinase (N-SMase) activation
associated factor" species:10116 "Rattus norvegicus" [GO:0006917
"induction of apoptosis" evidence=IMP] [GO:0016230 "sphingomyelin
phosphodiesterase activator activity" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 RGD:727868 GO:GO:0006917 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 CTD:8439 HOGENOM:HOG000231605 HOVERGEN:HBG005639
OrthoDB:EOG4M91QQ EMBL:AY163240 IPI:IPI00327109 RefSeq:NP_852054.1
UniGene:Rn.229389 ProteinModelPortal:Q7TSY5 STRING:Q7TSY5
GeneID:353233 KEGG:rno:353233 UCSC:RGD:727868 InParanoid:Q7TSY5
NextBio:672623 Genevestigator:Q7TSY5 GO:GO:0016230 Uniprot:Q7TSY5
Length = 920
Score = 96 (38.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282
+V++G G +LVWD+ + ++ H V C+ ++E C+ I+GG D++++ + L
Sbjct: 861 SVVSGSRTGELLVWDLLGAKVS-ERIQGHTGAVTCIRMNEQCSSIITGGEDRQVMFWKLQ 919
Query: 283 H 283
+
Sbjct: 920 Y 920
Score = 79 (32.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 26/93 (27%), Positives = 39/93 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
D +A L H SV + + +L +GT G + IWD + HS +
Sbjct: 758 DLLAELE-HDVSVNTINLNAVSTLLVSGTKEGLVNIWDLTTATLLHQISCHSGT--VCDA 814
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101
A P V+S G DG + D++ G L S+
Sbjct: 815 AFSPDS--RHVLSTGVDGCLNVIDVQTGMLISS 845
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 108 (43.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV DV F +L + + +++WD Q + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKT-MHGHDHNVSSVAFVPA 204
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + V+S RD T+K W++ G
Sbjct: 205 -G-DYVLSASRDRTIKMWEVATG 225
Score = 57 (25.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID--ESCNGGISGGADQKIVLY 279
+++ +D +I VWD+RN T + H C SID ++ ISG DQ + ++
Sbjct: 354 LVSASDDKTIRVWDLRNKRCMKT-LYAHQH--FCTSIDFHKAHPYVISGSVDQTVKVW 408
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 116 (45.9 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F QT +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTMKMWEVATG 224
Score = 48 (22.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
V++ +D ++ +WD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 VVSCADDKTLRIWDYKNKRCMKT-LSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVH 251
+L+G D +I +WDI + G+ L + H
Sbjct: 311 LLSGSRDKTIKMWDI-STGMCLMTLVGH 337
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSAARDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 112 (44.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F + +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W+++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVQTG 224
Score = 52 (23.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+L+ +D ++ VWD +N T + H V L ++ ++G DQ + ++
Sbjct: 353 ILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>ZFIN|ZDB-GENE-050417-342 [details] [associations]
symbol:nsmaf "neutral sphingomyelinase (N-SMase)
activation associated factor" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF02893 ZFIN:ZDB-GENE-050417-342
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 GeneTree:ENSGT00670000097747 CTD:8439 EMBL:CR354563
EMBL:CU929087 IPI:IPI00497443 RefSeq:XP_003199050.1
UniGene:Dr.88496 Ensembl:ENSDART00000073635 GeneID:550506
KEGG:dre:550506 NextBio:20879748 ArrayExpress:F1QZ06 Bgee:F1QZ06
Uniprot:F1QZ06
Length = 911
Score = 91 (37.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
VL+G G + VW++ N + H V C+ ++E C+ I+GG D++I+L+
Sbjct: 852 VLSGGISGDLSVWNLLNSKVVHKIPAAHSGAVTCMWMNEQCSSIITGGLDKQIILW 907
Score = 82 (33.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 26/90 (28%), Positives = 36/90 (40%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSV 68
DP+A H A V + +L GT G L +WD V+ HS I V
Sbjct: 748 DPLAEFE-HEAGVNTLDLSPAGTLLATGTKEGTLTVWDLASPLPVNQLTCHSGK--IHQV 804
Query: 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGL 98
A P ++S G D + D++ G L
Sbjct: 805 AFSPDS--RHILSVGEDSCLMVTDVQTGML 832
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 113 (44.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L+GH SV D+ F T +L + + +++WD + + +H H + SVA P+
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT--MHGHDHNVSSVAIMPN 203
Query: 74 IGLNKVISQGRDGTVKCWDIENG 96
G + ++S RD T+K W++ G
Sbjct: 204 -G-DHIVSASRDKTIKMWEVATG 224
Score = 49 (22.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+D ++ +WD +N T + H V L ++ ++G DQ + ++
Sbjct: 358 DDKTLRIWDYKNKRCTKT-LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230
L E+ IWD+ T E R+ GS N S+ + + +YL + + + AGY D
Sbjct: 45 LEEILIWDIKTGEIMNRMSDGLTPGSSNASTT---VPPSPVSYLTYHQETNI-IAAGYTD 100
Query: 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281
GSI +WDI + + + + H + L D++ +SG +D I++++L
Sbjct: 101 GSIKIWDISSNSVIIN-FEGHNSSITQLKFDKNGTRLVSGSSDSSIIMWDL 150
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230
L E+ IWD+ T E R+ GS N S+ + + +YL + + + AGY D
Sbjct: 45 LEEILIWDIKTGEIMNRMSDGLTPGSSNASTT---VPPSPVSYLTYHQETNI-IAAGYTD 100
Query: 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281
GSI +WDI + + + + H + L D++ +SG +D I++++L
Sbjct: 101 GSIKIWDISSNSVIIN-FEGHNSSITQLKFDKNGTRLVSGSSDSSIIMWDL 150
>ZFIN|ZDB-GENE-110411-237 [details] [associations]
symbol:kif21a "kinesin family member 21A"
species:7955 "Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001752 InterPro:IPR015943 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00129
SMART:SM00320 ZFIN:ZDB-GENE-110411-237 GO:GO:0005524 GO:GO:0005875
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005874 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00680000099754 EMBL:BX957352 EMBL:FP102117
IPI:IPI00506685 Ensembl:ENSDART00000004087 Uniprot:F1QWX6
Length = 1647
Score = 104 (41.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 172 SEVEIWDLNTAERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN----VLA 226
S +++WD+ + +C R L + + + + + + A +Q ++N VL
Sbjct: 1382 SYIKVWDIRDSAKCIRTLTSSGLVNTGDMCAASTNRTVTIPAGENQINQIYLNPSGTVLY 1441
Query: 227 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYNL 281
S+ VWD+R + + HL PV+CL++D++ NG I+G D I ++++
Sbjct: 1442 AAAGNSVRVWDLRR-FVCTGKLTGHLGPVMCLTVDQTGNGQDLVITGSKDHYIKMFDV 1498
Score = 71 (30.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
V V GH +V +C T ++F G+ ++W+ V + + S H + +VSV
Sbjct: 1316 VHVAEGHSKAV--LCVESTDDLMFTGSKDRTCKVWNLVTGQEIMSLGGHP--NNVVSVRY 1371
Query: 71 GPSIGLNKVISQGRDGTVKCWDIEN 95
S+ S +K WDI +
Sbjct: 1372 SSSLVFTVSTSY-----IKVWDIRD 1391
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 99 (39.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA 69
P+ V GH+ V V FH L G++ R+WD RT + V +A H VS
Sbjct: 479 PLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDV---RTGGTVRVFNAHHSPVSAL 535
Query: 70 TGPSIGLNKVISQGRDGTVKCWDIEN 95
+ GL+ + S G +K WD+ +
Sbjct: 536 CMSADGLS-LASADESGIIKVWDLRS 560
Score = 66 (28.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283
E G I VWD+R+ ++ +K H V LS +SGGAD + ++L +
Sbjct: 549 ESGIIKVWDLRSSNQHVSFVK-HSSIVYSLSFSYDNKILVSGGADTDVNFWDLTY 602
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 102 (41.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ +LRGH + + F L +G+ +RIWD RT S S G+ +VA
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL---RTSQCSLTLSIEDGVTTVAV 346
Query: 71 GPSIGLNKVISQGR-DGTVKCWDIENGGL 98
P K+I+ G D TV+ WD G L
Sbjct: 347 SPD---GKLIAAGSLDRTVRVWDSTTGFL 372
Score = 60 (26.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG--GI--SGGADQK 275
+L+G +D ++ WD + G PL ++ H V+ +++ + G GI +G D K
Sbjct: 449 ILSGSKDRGVIFWD-QASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCK 503
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 102 (41.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT 70
+ +LRGH + + F L +G+ +RIWD RT S S G+ +VA
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL---RTSQCSLTLSIEDGVTTVAV 346
Query: 71 GPSIGLNKVISQGR-DGTVKCWDIENGGL 98
P K+I+ G D TV+ WD G L
Sbjct: 347 SPD---GKLIAAGSLDRTVRVWDSTTGFL 372
Score = 60 (26.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG--GI--SGGADQK 275
+L+G +D ++ WD + G PL ++ H V+ +++ + G GI +G D K
Sbjct: 449 ILSGSKDRGVIFWD-QASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCK 503
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 84 (34.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/80 (23%), Positives = 37/80 (46%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL G + ++TD+ + + +++ ++ L WD V + + H G+V+
Sbjct: 88 VLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRK---HKGHAGVVNALDVL 144
Query: 73 SIGLNKVISQGRDGTVKCWD 92
+G + S D T+K WD
Sbjct: 145 KVGSELLTSVSDDCTMKVWD 164
Score = 74 (31.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 219 QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL 278
QG V G DG+I +WD+RN +K H + + L+I + + +S D + +
Sbjct: 188 QG-TQVFIGGIDGAIKIWDLRNNHCS-HVLKGHKDIITSLAISKDGSSLLSNSMDNTVRI 245
Query: 279 YNLDH--STYVLFGI--GFVCDQEGNKFGTTW 306
+++ S I G + QE N G W
Sbjct: 246 FDVKPFASAQRQLQIFEGAIHGQEHNLLGVAW 277
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 56/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC R+ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVRIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 84 (34.6 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
+++G D + +WD R+ PL + H + VLC+ E+ +SGGAD K+ Y
Sbjct: 346 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEA-GLLLSGGADNKLYCY 400
Score = 60 (26.2 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 78 KVISQGRDGTVKCWDIENGGLSS 100
++ S D T+K WD E GGL S
Sbjct: 258 EICSASWDHTIKLWDAETGGLKS 280
Score = 51 (23.0 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV 48
RGH SV V T+ +G+ L+IW V
Sbjct: 174 RGHAGSVDSVAVDCTRTKFCSGSWDKMLKIWSAV 207
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 82 (33.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLD 282
+++G D + +WD R+ PL + H + VL S+D + G + SGGAD K+ Y
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVL--SVDWTDTGLLLSGGADNKLYSYRYS 415
Query: 283 HST 285
+T
Sbjct: 416 PTT 418
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 77 NKVISQGRDGTVKCWDIENGGLSS 100
++V S D TV+ WD+E+GGL S
Sbjct: 269 DEVCSASWDHTVRVWDVESGGLKS 292
Score = 48 (22.0 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV 48
RGH SV + + +G+ L+IW TV
Sbjct: 186 RGHAGSVDAIAVDSSGTKFCSGSWDKMLKIWSTV 219
>UNIPROTKB|Q148I1 [details] [associations]
symbol:PAAF1 "Proteasomal ATPase-associated factor 1"
species:9913 "Bos taurus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000502 EMBL:BC118307 IPI:IPI00691381 RefSeq:NP_001069458.1
UniGene:Bt.17989 ProteinModelPortal:Q148I1 STRING:Q148I1
PRIDE:Q148I1 Ensembl:ENSBTAT00000004794 GeneID:533348
KEGG:bta:533348 CTD:80227 GeneTree:ENSGT00390000005948
HOGENOM:HOG000006858 HOVERGEN:HBG056033 InParanoid:Q148I1 KO:K11887
OMA:HPPGKPS OrthoDB:EOG41VK31 NextBio:20876009 ArrayExpress:Q148I1
Uniprot:Q148I1
Length = 392
Score = 80 (33.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72
VL GH V F + ++ +G +L+IW V + H GI+ A
Sbjct: 129 VLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKG--GILDTAIVD 186
Query: 73 SIGLNKVISQGRDGTVKCWD 92
G N V+S RDGT + WD
Sbjct: 187 R-GKN-VVSGSRDGTARLWD 204
Score = 77 (32.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK--IV 277
GF+ +LAG +DG+I D+RNP P+ +H +S+ +G I+ D IV
Sbjct: 291 GFL-LLAGTQDGNIYQLDVRNPRTPVQV--IHRSGAPVMSLLSFRDGFIASQGDGSCFIV 347
Query: 278 LYNLDHSTYVLFGIGFVCD 296
+LD YV+ G CD
Sbjct: 348 QQDLD---YVIELTGADCD 363
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 99 (39.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73
L GH V + +F+ +++ WD Q++ + S H HG+ +A P+
Sbjct: 208 LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRS--YHGHLHGVYCLALHPT 265
Query: 74 IGLNKVISQGRDGTVKCWDI 93
L+ V++ GRD + WDI
Sbjct: 266 --LDVVLTGGRDSVCRVWDI 283
Score = 58 (25.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 273
V+ G D +I WD+R G + + H + V +++ N +S AD
Sbjct: 310 VITGSHDSTIKFWDLRY-GKSMATITNHKKTVRAMALHPKENDFVSASAD 358
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 99 (39.9 bits), Expect = 0.00071, Sum P(3) = 0.00070
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71
AV GHR SVT + F++ IL +G+ E+ +WD + + H I SV
Sbjct: 95 AVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQ--ITSVKLL 152
Query: 72 PSIGLNKVISQGRDGTVKCWDIE 94
N +I+ +DG +K WD E
Sbjct: 153 ERS--NHLITSSKDGFIKIWDTE 173
Score = 66 (28.3 bits), Expect = 0.00071, Sum P(3) = 0.00070
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283
H PV+CL I + I+G AD+ I ++ LD+
Sbjct: 572 HKLPVMCLDISDDSTLIITGSADKNIKIWGLDY 604
Score = 65 (27.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279
G ++V+ G + G+I V+++ + + ++K H V L + G SGGAD+ + +
Sbjct: 446 GNLHVIVGTKTGTIEVFELASAA-RVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFW 504
Query: 280 NLD 282
+ +
Sbjct: 505 DFE 507
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(3) = 0.00070
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 92 DIENGGLSSNPSLTIKTNS 110
DI + LSSN + + T+S
Sbjct: 398 DIRSLSLSSNDQMLVSTSS 416
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 113 (44.8 bits), Expect = 0.00076, P = 0.00076
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 266
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 267 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 313
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 267
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 268 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219
GP + + L +V IWD+ T + ++L G P +S RG A YL +
Sbjct: 37 GPGQLITSA--LEDVNIWDIKTGDLVSKLSD----GLPPGASDARGAKPAECTYLEAHKD 90
Query: 220 GFVNVLA-GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVL 278
++LA GY DG I VWD+ + + L H + L D + ISG D I++
Sbjct: 91 --TDLLAVGYADGVIKVWDLMSKTVLLN-FNGHKAAITLLQFDGTGTRLISGSKDSNIIV 147
Query: 279 YNL 281
++L
Sbjct: 148 WDL 150
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 82 (33.9 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLD 282
+++G D + +WD R+ PL + H + VL S+D + G + SGGAD K+ Y+
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVL--SVDWTDTGLLLSGGADNKLYSYSYS 415
Query: 283 HST 285
+T
Sbjct: 416 PTT 418
Score = 62 (26.9 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 78 KVISQGRDGTVKCWDIENGGLSS 100
++ S D T++ WD+E+GGL S
Sbjct: 270 EICSASWDHTIRVWDVESGGLKS 292
Score = 48 (22.0 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV 48
RGH SV + + +G+ L+IW TV
Sbjct: 186 RGHAGSVDAIAVDSSGAKFCSGSWDKMLKIWSTV 219
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 113 (44.8 bits), Expect = 0.00096, P = 0.00096
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 159
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL--VKEPYAN 125
GP + V + DGTVK WDI ++ N+Y ++ + +
Sbjct: 160 ARRGPQL----VCTGSDDGTVKLWDIRK-----KAAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 126 AKQANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRP 266
Query: 182 ---AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 267 FAPKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 313
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 112 (44.5 bits), Expect = 0.0010, P = 0.0010
Identities = 56/237 (23%), Positives = 98/237 (41%)
Query: 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVS 67
D A L+GH +V ++ ++ +LF+ +T + +WD+ V H++ +
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYP 160
Query: 68 VATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK 127
GP + V + DGTVK WDI T + + F S + +
Sbjct: 161 ARRGPQL----VCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTS---DQIISGG 213
Query: 128 QANEPK--DCYEREVGETV--DTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT-- 181
N+ K D + ++ T+ DS+ + +EG ++ A + + V +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLS--LSSEGSYLLSNAMD--NTVRVWDVRPFA 269
Query: 182 -AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237
ERC ++ Q G NF K C ++ P S+ + AG D + VWD
Sbjct: 270 PKERCVKIFQ---GNVHNFE-KNLLRC----SWSPDGSK----IAAGSADRFVYVWD 314
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 314 0.00081 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 625 (66 KB)
Total size of DFA: 255 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.64u 0.08s 27.72t Elapsed: 00:00:02
Total cpu time: 27.64u 0.08s 27.72t Elapsed: 00:00:02
Start: Sat May 11 11:34:13 2013 End: Sat May 11 11:34:15 2013