Query 021291
Match_columns 314
No_of_seqs 511 out of 1238
Neff 11.6
Searched_HMMs 29240
Date Mon Mar 25 15:32:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3.8E-41 1.3E-45 272.5 35.0 259 9-290 4-266 (304)
2 1vyh_C Platelet-activating fac 100.0 6.3E-40 2.1E-44 276.1 31.8 270 10-304 100-397 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1E-38 3.6E-43 262.3 37.8 271 7-304 44-329 (340)
4 3ow8_A WD repeat-containing pr 100.0 1.9E-39 6.6E-44 264.3 31.9 269 8-304 22-307 (321)
5 4gqb_B Methylosome protein 50; 100.0 3.3E-39 1.1E-43 264.9 27.9 245 16-286 80-334 (344)
6 3iz6_a 40S ribosomal protein R 100.0 1.1E-38 3.6E-43 266.1 30.8 277 5-304 53-361 (380)
7 1vyh_C Platelet-activating fac 100.0 1.5E-38 5E-43 267.8 29.6 249 7-282 139-410 (410)
8 3ow8_A WD repeat-containing pr 100.0 1.1E-37 3.8E-42 253.9 31.2 245 10-282 72-320 (321)
9 4g56_B MGC81050 protein; prote 100.0 1.1E-38 3.7E-43 263.7 25.3 252 11-288 87-348 (357)
10 2pbi_B Guanine nucleotide-bind 100.0 1.7E-36 5.9E-41 250.3 35.7 273 7-304 53-343 (354)
11 2pm7_B Protein transport prote 100.0 2.7E-37 9.4E-42 249.1 29.5 257 11-284 2-286 (297)
12 4ery_A WD repeat-containing pr 100.0 2.2E-36 7.5E-41 245.6 33.5 270 8-304 13-296 (312)
13 3frx_A Guanine nucleotide-bind 100.0 1.1E-36 3.8E-41 248.0 31.2 232 9-304 8-254 (319)
14 3bg1_A Protein SEC13 homolog; 100.0 6.4E-37 2.2E-41 249.0 28.3 255 12-285 7-295 (316)
15 2ynn_A Coatomer subunit beta'; 100.0 1.3E-36 4.5E-41 245.9 29.5 253 8-284 45-303 (304)
16 4aow_A Guanine nucleotide-bind 100.0 1.7E-35 5.7E-40 243.0 34.6 269 9-304 29-323 (340)
17 4g56_B MGC81050 protein; prote 100.0 3.4E-36 1.2E-40 248.7 30.5 268 14-304 38-329 (357)
18 3frx_A Guanine nucleotide-bind 100.0 4.8E-36 1.6E-40 244.2 30.3 244 9-284 56-318 (319)
19 4ery_A WD repeat-containing pr 100.0 2.5E-35 8.7E-40 239.3 33.1 252 7-282 54-311 (312)
20 1got_B GT-beta; complex (GTP-b 100.0 2.7E-35 9.2E-40 242.0 32.8 247 7-280 86-340 (340)
21 3iz6_a 40S ribosomal protein R 100.0 4.9E-37 1.7E-41 256.1 22.6 262 7-286 97-378 (380)
22 4gqb_B Methylosome protein 50; 100.0 7.2E-36 2.4E-40 245.1 28.4 261 16-301 28-313 (344)
23 1nr0_A Actin interacting prote 100.0 1.4E-35 4.7E-40 261.9 32.1 248 16-288 16-275 (611)
24 1erj_A Transcriptional repress 100.0 1.5E-35 5.3E-40 248.1 30.3 237 20-284 125-390 (393)
25 2xzm_R RACK1; ribosome, transl 100.0 5.6E-36 1.9E-40 246.3 27.0 249 9-285 67-342 (343)
26 1nr0_A Actin interacting prote 100.0 5E-35 1.7E-39 258.3 34.9 260 7-288 48-360 (611)
27 2pbi_B Guanine nucleotide-bind 100.0 4.8E-35 1.6E-39 241.6 31.9 249 7-280 95-354 (354)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.1E-35 7.3E-40 243.0 29.5 252 9-284 6-284 (345)
29 2xzm_R RACK1; ribosome, transl 100.0 2.4E-34 8.3E-39 236.6 31.3 250 9-286 12-288 (343)
30 2hes_X YDR267CP; beta-propelle 100.0 2.4E-34 8.1E-39 235.3 30.5 253 8-285 4-282 (330)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-34 4.4E-39 238.4 28.8 253 14-289 57-341 (345)
32 4ggc_A P55CDC, cell division c 100.0 2.2E-34 7.4E-39 234.2 29.0 265 5-284 8-316 (318)
33 1erj_A Transcriptional repress 100.0 2.3E-34 7.8E-39 241.0 29.9 257 16-291 62-349 (393)
34 3zwl_B Eukaryotic translation 100.0 1.5E-33 5.1E-38 233.7 34.0 266 11-304 25-332 (369)
35 4gga_A P55CDC, cell division c 100.0 5.4E-34 1.9E-38 240.9 30.9 252 8-288 135-400 (420)
36 3f3f_A Nucleoporin SEH1; struc 100.0 4.5E-34 1.6E-38 234.8 28.4 266 10-292 3-346 (351)
37 2hes_X YDR267CP; beta-propelle 100.0 5.6E-34 1.9E-38 233.1 28.4 253 9-284 47-329 (330)
38 3jrp_A Fusion protein of prote 100.0 5.3E-35 1.8E-39 243.4 22.0 262 8-287 1-291 (379)
39 1sq9_A Antiviral protein SKI8; 100.0 6.4E-34 2.2E-38 238.5 28.1 259 9-291 7-330 (397)
40 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-32 3.9E-37 223.4 33.9 265 6-303 6-282 (313)
41 3dm0_A Maltose-binding peripla 100.0 5.5E-33 1.9E-37 248.9 33.9 252 10-288 374-637 (694)
42 3mkq_A Coatomer beta'-subunit; 100.0 2E-33 7E-38 256.1 31.0 268 9-300 4-283 (814)
43 4e54_B DNA damage-binding prot 100.0 1.2E-34 4.3E-39 245.8 21.2 219 9-289 110-333 (435)
44 1gxr_A ESG1, transducin-like e 100.0 1.7E-32 6E-37 224.5 33.2 261 13-304 46-323 (337)
45 3v7d_B Cell division control p 100.0 5.2E-33 1.8E-37 237.8 31.2 252 7-289 110-387 (464)
46 4a11_B DNA excision repair pro 100.0 6.2E-33 2.1E-37 233.1 30.3 269 8-289 33-371 (408)
47 2j04_B YDR362CP, TAU91; beta p 100.0 2.5E-34 8.6E-39 247.4 21.7 273 8-302 124-458 (524)
48 3i2n_A WD repeat-containing pr 100.0 3.9E-33 1.3E-37 230.3 27.7 261 1-285 1-293 (357)
49 4aow_A Guanine nucleotide-bind 100.0 8E-33 2.7E-37 227.0 29.0 250 9-286 77-340 (340)
50 2pm9_A Protein WEB1, protein t 100.0 1.7E-33 5.8E-38 237.3 25.4 249 16-286 65-340 (416)
51 3ei3_B DNA damage-binding prot 100.0 4.6E-33 1.6E-37 232.4 27.6 266 7-305 62-370 (383)
52 2ymu_A WD-40 repeat protein; u 100.0 6.3E-33 2.2E-37 243.5 29.5 240 8-280 334-577 (577)
53 4aez_A CDC20, WD repeat-contai 100.0 2.5E-32 8.4E-37 229.4 31.8 253 8-290 123-387 (401)
54 2ymu_A WD-40 repeat protein; u 100.0 3.7E-32 1.3E-36 238.7 34.4 265 7-305 292-567 (577)
55 3dm0_A Maltose-binding peripla 100.0 1.9E-32 6.5E-37 245.4 32.0 248 9-283 421-693 (694)
56 1sq9_A Antiviral protein SKI8; 100.0 2.5E-33 8.7E-38 234.9 24.6 260 9-285 53-397 (397)
57 3dw8_B Serine/threonine-protei 100.0 1.5E-33 5.1E-38 239.9 23.5 253 17-288 27-378 (447)
58 3dwl_C Actin-related protein 2 100.0 3.6E-34 1.2E-38 238.6 18.9 230 13-304 6-268 (377)
59 1k8k_C P40, ARP2/3 complex 41 100.0 8.4E-33 2.9E-37 229.6 26.9 243 13-283 3-274 (372)
60 3gre_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 237.4 24.2 261 6-292 50-368 (437)
61 2pm9_A Protein WEB1, protein t 100.0 7.7E-34 2.6E-38 239.5 19.8 252 8-284 103-415 (416)
62 3zwl_B Eukaryotic translation 100.0 1.5E-31 5E-36 221.7 32.7 255 7-288 63-351 (369)
63 3vl1_A 26S proteasome regulato 100.0 5.6E-32 1.9E-36 228.5 30.4 235 7-284 128-366 (420)
64 4h5i_A Guanine nucleotide-exch 100.0 7.2E-33 2.5E-37 229.4 23.9 202 17-284 132-344 (365)
65 1r5m_A SIR4-interacting protei 100.0 3.4E-32 1.2E-36 229.7 28.2 238 17-285 107-363 (425)
66 3mmy_A MRNA export factor; mRN 100.0 1.7E-31 5.7E-36 221.3 30.2 280 5-305 26-333 (368)
67 1yfq_A Cell cycle arrest prote 100.0 9.2E-32 3.1E-36 220.9 27.9 251 11-292 4-291 (342)
68 3v7d_B Cell division control p 100.0 5E-31 1.7E-35 225.5 33.6 254 7-289 151-427 (464)
69 2xyi_A Probable histone-bindin 100.0 1.8E-32 6.2E-37 232.2 23.8 253 11-284 121-411 (430)
70 4e54_B DNA damage-binding prot 100.0 4.6E-32 1.6E-36 230.1 26.1 256 9-286 155-433 (435)
71 3k26_A Polycomb protein EED; W 100.0 2E-32 7E-37 226.7 23.3 276 12-304 12-352 (366)
72 4aez_A CDC20, WD repeat-contai 100.0 3.3E-31 1.1E-35 222.5 31.0 269 7-304 78-366 (401)
73 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-31 4.2E-36 225.2 27.5 232 9-303 72-329 (402)
74 3vu4_A KMHSV2; beta-propeller 100.0 8.1E-32 2.8E-36 222.4 24.8 243 8-285 9-273 (355)
75 3i2n_A WD repeat-containing pr 100.0 6.6E-32 2.3E-36 222.9 24.2 252 15-286 62-356 (357)
76 3jro_A Fusion protein of prote 100.0 8E-33 2.7E-37 249.4 19.5 257 11-285 2-287 (753)
77 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4E-30 1.4E-34 218.8 35.0 260 7-304 148-424 (445)
78 1gxr_A ESG1, transducin-like e 100.0 1.5E-30 5.2E-35 213.0 31.2 243 10-282 87-336 (337)
79 1r5m_A SIR4-interacting protei 100.0 1.4E-30 4.9E-35 219.8 31.0 265 10-304 35-347 (425)
80 1k8k_C P40, ARP2/3 complex 41 100.0 1E-31 3.5E-36 223.1 23.5 253 10-287 44-365 (372)
81 4gga_A P55CDC, cell division c 100.0 2.7E-30 9.1E-35 218.3 32.4 273 7-304 90-381 (420)
82 3ei3_B DNA damage-binding prot 100.0 3.5E-31 1.2E-35 221.0 26.2 255 9-283 107-382 (383)
83 3sfz_A APAF-1, apoptotic pepti 100.0 9.3E-31 3.2E-35 248.5 32.1 260 9-283 606-913 (1249)
84 2w18_A PALB2, fancn, partner a 100.0 1.3E-31 4.6E-36 213.0 20.9 207 19-281 112-355 (356)
85 3k26_A Polycomb protein EED; W 100.0 2.1E-31 7.1E-36 220.6 22.7 241 17-283 68-366 (366)
86 3odt_A Protein DOA1; ubiquitin 100.0 3.1E-30 1.1E-34 209.1 28.5 245 8-288 49-301 (313)
87 1p22_A F-BOX/WD-repeat protein 100.0 1E-30 3.6E-35 221.8 26.4 247 7-288 162-419 (435)
88 3mmy_A MRNA export factor; mRN 100.0 3.6E-30 1.2E-34 213.3 28.4 247 11-282 79-345 (368)
89 1pgu_A Actin interacting prote 100.0 2.2E-30 7.5E-35 228.9 28.8 254 16-290 16-290 (615)
90 4gq1_A NUP37; propeller, trans 100.0 1.6E-31 5.5E-36 223.6 20.3 231 11-281 129-387 (393)
91 2j04_B YDR362CP, TAU91; beta p 100.0 2.5E-31 8.5E-36 228.8 21.8 248 12-284 201-518 (524)
92 3vl1_A 26S proteasome regulato 100.0 6.7E-31 2.3E-35 221.9 23.8 213 14-286 94-325 (420)
93 1p22_A F-BOX/WD-repeat protein 100.0 4.2E-30 1.4E-34 218.1 28.0 239 10-285 125-367 (435)
94 2oaj_A Protein SNI1; WD40 repe 100.0 1.9E-30 6.6E-35 237.3 26.5 213 14-288 13-247 (902)
95 3dwl_C Actin-related protein 2 100.0 2.8E-31 9.7E-36 221.0 19.2 209 9-282 46-280 (377)
96 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-29 6.5E-34 239.6 33.1 257 7-288 646-1039(1249)
97 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-29 4.3E-34 231.2 30.4 255 7-286 44-305 (814)
98 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-29 3.7E-34 232.4 27.0 261 13-288 146-610 (902)
99 3gre_A Serine/threonine-protei 100.0 3.4E-29 1.2E-33 212.6 27.8 258 10-280 104-437 (437)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.3E-29 2.5E-33 211.0 29.9 245 7-284 188-443 (445)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.7E-29 3E-33 210.8 29.4 212 13-284 97-342 (450)
102 3lrv_A PRE-mRNA-splicing facto 100.0 4.1E-30 1.4E-34 211.4 18.3 214 26-304 44-277 (343)
103 1pgu_A Actin interacting prote 100.0 2.3E-28 7.9E-33 216.0 29.3 256 9-290 54-335 (615)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.6E-28 8.9E-33 207.9 26.6 212 18-290 4-278 (450)
105 1yfq_A Cell cycle arrest prote 100.0 1.6E-28 5.4E-33 201.6 24.3 242 10-281 48-322 (342)
106 1l0q_A Surface layer protein; 100.0 4E-27 1.4E-31 196.9 32.0 252 7-289 21-281 (391)
107 2aq5_A Coronin-1A; WD40 repeat 100.0 6.3E-29 2.1E-33 208.7 21.0 211 9-286 122-345 (402)
108 2j04_A TAU60, YPL007P, hypothe 100.0 6.3E-28 2.2E-32 203.9 24.3 229 16-313 83-355 (588)
109 4h5i_A Guanine nucleotide-exch 100.0 1.1E-27 3.6E-32 198.4 25.0 262 18-304 14-329 (365)
110 2j04_A TAU60, YPL007P, hypothe 100.0 2.4E-28 8.2E-33 206.4 21.2 217 15-304 12-284 (588)
111 4gq1_A NUP37; propeller, trans 100.0 1.3E-28 4.5E-33 206.0 18.7 237 17-305 88-377 (393)
112 3dw8_B Serine/threonine-protei 100.0 5.8E-28 2E-32 205.4 22.8 250 9-282 72-445 (447)
113 2pm7_B Protein transport prote 100.0 2.5E-27 8.4E-32 190.9 24.7 229 55-304 4-271 (297)
114 3lrv_A PRE-mRNA-splicing facto 100.0 5.6E-28 1.9E-32 198.6 21.2 212 9-289 69-298 (343)
115 4ggc_A P55CDC, cell division c 100.0 1.1E-26 3.9E-31 188.6 27.9 215 7-240 54-315 (318)
116 3bws_A Protein LP49; two-domai 100.0 9.5E-27 3.3E-31 197.2 28.1 269 9-304 114-417 (433)
117 3bws_A Protein LP49; two-domai 100.0 2.6E-26 8.9E-31 194.5 27.3 242 13-283 164-432 (433)
118 3bg1_A Protein SEC13 homolog; 100.0 4E-27 1.4E-31 191.3 19.2 230 55-304 8-279 (316)
119 1l0q_A Surface layer protein; 100.0 2.7E-25 9.1E-30 185.8 29.8 243 31-302 3-258 (391)
120 2xyi_A Probable histone-bindin 100.0 1E-25 3.5E-30 190.8 26.8 244 19-283 46-353 (430)
121 3f3f_A Nucleoporin SEH1; struc 100.0 7E-26 2.4E-30 185.9 24.9 217 9-248 48-344 (351)
122 3vu4_A KMHSV2; beta-propeller 99.9 2.8E-25 9.5E-30 183.3 27.8 234 19-285 59-338 (355)
123 2w18_A PALB2, fancn, partner a 99.9 3.9E-26 1.3E-30 181.7 17.8 170 8-238 168-355 (356)
124 3jrp_A Fusion protein of prote 99.9 4.8E-25 1.6E-29 183.2 24.3 216 8-240 45-287 (379)
125 4a11_B DNA excision repair pro 99.9 7.9E-25 2.7E-29 183.7 25.0 253 15-283 96-405 (408)
126 1nir_A Nitrite reductase; hemo 99.9 4.7E-23 1.6E-27 178.6 29.4 280 7-306 168-498 (543)
127 3jro_A Fusion protein of prote 99.9 4.1E-24 1.4E-28 192.8 23.0 216 8-240 43-285 (753)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.6E-23 3.3E-27 171.5 27.9 208 8-285 168-389 (415)
129 3u4y_A Uncharacterized protein 99.9 9.8E-22 3.3E-26 160.5 26.1 255 7-288 29-309 (331)
130 2ojh_A Uncharacterized protein 99.9 1E-21 3.4E-26 157.4 24.4 229 10-305 33-289 (297)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-21 3.6E-26 165.2 22.9 228 7-303 104-369 (415)
132 3vgz_A Uncharacterized protein 99.9 2.9E-20 9.9E-25 153.0 30.6 261 17-301 39-327 (353)
133 1nir_A Nitrite reductase; hemo 99.9 5.5E-21 1.9E-25 165.7 26.6 251 25-304 144-437 (543)
134 1ri6_A Putative isomerase YBHE 99.9 1.6E-20 5.4E-25 153.8 25.2 252 16-285 35-312 (343)
135 3u4y_A Uncharacterized protein 99.9 6.2E-20 2.1E-24 149.8 27.4 239 25-286 4-255 (331)
136 3hfq_A Uncharacterized protein 99.9 3E-20 1E-24 152.7 25.1 224 10-289 77-325 (347)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 2.7E-21 9.2E-26 163.3 17.5 204 17-284 35-279 (434)
138 2ecf_A Dipeptidyl peptidase IV 99.9 4.4E-20 1.5E-24 166.7 25.9 238 18-282 36-366 (741)
139 1pby_B Quinohemoprotein amine 99.9 1.2E-19 4E-24 148.3 25.7 254 8-290 21-317 (337)
140 3o4h_A Acylamino-acid-releasin 99.9 1.5E-20 5.1E-25 165.2 19.6 251 18-302 21-296 (582)
141 2ecf_A Dipeptidyl peptidase IV 99.9 6.2E-20 2.1E-24 165.7 23.7 263 20-305 110-442 (741)
142 1xfd_A DIP, dipeptidyl aminope 99.8 5.3E-20 1.8E-24 165.7 19.2 225 19-303 17-321 (723)
143 3vgz_A Uncharacterized protein 99.8 2E-18 6.9E-23 141.9 26.8 240 8-274 79-335 (353)
144 1jmx_B Amine dehydrogenase; ox 99.8 6.3E-19 2.1E-23 144.7 22.6 248 23-290 4-332 (349)
145 2oit_A Nucleoporin 214KDA; NH2 99.8 2.1E-19 7.2E-24 151.7 20.0 163 16-240 90-278 (434)
146 3hfq_A Uncharacterized protein 99.8 1.7E-18 5.9E-23 142.2 24.9 237 15-302 36-300 (347)
147 1ri6_A Putative isomerase YBHE 99.8 1.6E-18 5.5E-23 141.8 24.1 250 32-302 7-291 (343)
148 3scy_A Hypothetical bacterial 99.8 2.3E-17 8E-22 136.2 30.7 250 17-288 48-344 (361)
149 2z3z_A Dipeptidyl aminopeptida 99.8 1.2E-18 4E-23 156.6 24.5 264 19-304 82-417 (706)
150 1xfd_A DIP, dipeptidyl aminope 99.8 1.4E-18 4.9E-23 156.4 23.2 279 8-304 47-426 (723)
151 2ojh_A Uncharacterized protein 99.8 6.6E-18 2.3E-22 135.1 24.2 205 35-304 17-233 (297)
152 2z3z_A Dipeptidyl aminopeptida 99.8 2.2E-18 7.5E-23 154.8 20.8 250 10-285 112-437 (706)
153 2oiz_A Aromatic amine dehydrog 99.8 4.2E-17 1.4E-21 134.5 26.5 274 7-300 40-360 (361)
154 1k32_A Tricorn protease; prote 99.8 8.4E-18 2.9E-22 157.1 24.9 256 10-303 195-487 (1045)
155 1pby_B Quinohemoprotein amine 99.8 3.1E-17 1.1E-21 133.9 24.7 211 31-303 2-295 (337)
156 3pe7_A Oligogalacturonate lyas 99.8 1.8E-17 6.2E-22 138.1 21.7 218 5-286 17-276 (388)
157 1k32_A Tricorn protease; prote 99.8 8.9E-18 3E-22 156.9 21.3 240 9-282 236-501 (1045)
158 1z68_A Fibroblast activation p 99.8 1.4E-18 4.8E-23 156.4 15.3 203 22-286 19-294 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.9E-17 2E-21 134.0 22.5 255 17-284 38-342 (365)
160 3scy_A Hypothetical bacterial 99.7 1.4E-15 4.9E-20 125.4 24.6 252 28-303 11-321 (361)
161 3fvz_A Peptidyl-glycine alpha- 99.7 5.1E-15 1.7E-19 120.6 27.4 246 18-306 23-310 (329)
162 3o4h_A Acylamino-acid-releasin 99.7 2.4E-16 8.2E-21 138.4 18.6 196 63-287 22-231 (582)
163 3c5m_A Oligogalacturonate lyas 99.7 6E-16 2E-20 129.2 19.6 255 5-286 17-332 (396)
164 4a5s_A Dipeptidyl peptidase 4 99.7 5.2E-16 1.8E-20 140.0 20.5 249 18-287 16-357 (740)
165 1z68_A Fibroblast activation p 99.7 4.3E-17 1.5E-21 146.7 13.0 234 9-285 47-348 (719)
166 1q7f_A NHL, brain tumor CG1071 99.7 2.8E-14 9.7E-19 113.8 27.6 238 16-284 27-281 (286)
167 3pe7_A Oligogalacturonate lyas 99.7 2E-15 6.9E-20 125.7 21.1 254 9-283 71-382 (388)
168 3e5z_A Putative gluconolactona 99.7 1.6E-14 5.4E-19 115.9 24.9 245 7-284 16-287 (296)
169 1jmx_B Amine dehydrogenase; ox 99.7 2.9E-15 1E-19 122.7 20.7 214 8-251 31-335 (349)
170 2dg1_A DRP35, lactonase; beta 99.7 3.9E-13 1.3E-17 109.5 30.2 210 9-282 35-262 (333)
171 2xdw_A Prolyl endopeptidase; a 99.7 4.3E-14 1.5E-18 127.0 26.0 226 17-302 123-394 (710)
172 1jof_A Carboxy-CIS,CIS-muconat 99.7 1E-13 3.5E-18 114.6 24.3 193 32-282 4-223 (365)
173 3no2_A Uncharacterized protein 99.6 2E-13 6.8E-18 108.0 24.7 214 29-306 4-231 (276)
174 3fvz_A Peptidyl-glycine alpha- 99.6 1.6E-13 5.5E-18 111.7 24.3 219 16-283 88-322 (329)
175 3azo_A Aminopeptidase; POP fam 99.6 2.4E-14 8.3E-19 127.6 21.1 214 11-286 16-277 (662)
176 1qks_A Cytochrome CD1 nitrite 99.6 1.1E-12 3.8E-17 113.7 30.5 254 8-284 187-478 (567)
177 3dsm_A Uncharacterized protein 99.6 9.7E-13 3.3E-17 107.0 27.2 254 19-305 44-322 (328)
178 1qks_A Cytochrome CD1 nitrite 99.6 6.6E-13 2.3E-17 115.1 26.7 207 28-290 165-380 (567)
179 3azo_A Aminopeptidase; POP fam 99.6 4.1E-14 1.4E-18 126.2 19.2 216 9-286 115-372 (662)
180 2bkl_A Prolyl endopeptidase; m 99.6 3.7E-14 1.3E-18 127.0 17.1 249 16-286 118-400 (695)
181 1rwi_B Serine/threonine-protei 99.6 1.3E-12 4.5E-17 103.1 24.1 237 20-286 25-267 (270)
182 2gop_A Trilobed protease; beta 99.6 1.5E-12 5.2E-17 106.6 25.0 225 19-282 59-330 (347)
183 3no2_A Uncharacterized protein 99.6 2.5E-12 8.6E-17 101.7 25.1 219 6-289 23-258 (276)
184 3c5m_A Oligogalacturonate lyas 99.6 7.1E-13 2.4E-17 110.5 21.4 234 22-285 84-386 (396)
185 2oiz_A Aromatic amine dehydrog 99.6 3.4E-12 1.2E-16 105.2 24.8 119 29-189 14-149 (361)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.6E-12 2.6E-16 100.9 26.0 258 1-284 1-300 (314)
187 2mad_H Methylamine dehydrogena 99.6 3.8E-11 1.3E-15 99.1 30.5 260 8-290 57-357 (373)
188 2dg1_A DRP35, lactonase; beta 99.5 3.4E-11 1.2E-15 98.0 26.8 203 14-274 82-301 (333)
189 3hrp_A Uncharacterized protein 99.5 1.1E-10 3.9E-15 97.5 28.4 229 19-307 131-399 (409)
190 2xdw_A Prolyl endopeptidase; a 99.5 1.6E-11 5.6E-16 110.2 24.5 205 21-285 173-416 (710)
191 4a5s_A Dipeptidyl peptidase 4 99.5 3.7E-12 1.3E-16 114.9 20.4 86 7-98 45-144 (740)
192 1yr2_A Prolyl oligopeptidase; 99.5 1.1E-11 3.8E-16 111.9 22.0 247 17-286 161-444 (741)
193 3sjl_D Methylamine dehydrogena 99.5 6.7E-11 2.3E-15 96.7 24.1 259 9-290 70-370 (386)
194 3c75_H MADH, methylamine dehyd 99.5 3.6E-11 1.2E-15 100.0 22.8 250 23-290 122-409 (426)
195 2gop_A Trilobed protease; beta 99.4 1.9E-11 6.6E-16 100.0 20.4 236 1-286 1-294 (347)
196 3g4e_A Regucalcin; six bladed 99.4 2E-10 6.9E-15 91.9 25.7 231 14-270 8-259 (297)
197 3dsm_A Uncharacterized protein 99.4 9.7E-11 3.3E-15 95.2 23.8 237 37-305 14-285 (328)
198 2z2n_A Virginiamycin B lyase; 99.4 4.9E-09 1.7E-13 83.6 33.3 239 14-282 10-254 (299)
199 1xip_A Nucleoporin NUP159; bet 99.4 9.8E-12 3.3E-16 102.0 17.0 171 20-270 39-231 (388)
200 2hz6_A Endoplasmic reticulum t 99.4 2E-13 6.8E-18 112.8 6.1 188 29-289 8-198 (369)
201 2qc5_A Streptogramin B lactona 99.4 1.5E-08 5.1E-13 80.8 32.5 260 16-306 17-290 (300)
202 1q7f_A NHL, brain tumor CG1071 99.3 9.2E-10 3.2E-14 87.5 23.5 170 8-240 109-280 (286)
203 3iuj_A Prolyl endopeptidase; h 99.3 5E-10 1.7E-14 100.3 23.6 206 16-285 126-361 (693)
204 3dr2_A Exported gluconolactona 99.3 1E-09 3.5E-14 88.1 22.9 236 9-275 35-299 (305)
205 2ghs_A AGR_C_1268P; regucalcin 99.3 3.9E-09 1.3E-13 85.6 26.4 225 19-273 49-293 (326)
206 2qe8_A Uncharacterized protein 99.3 5.3E-10 1.8E-14 91.4 21.4 242 19-306 17-309 (343)
207 2iwa_A Glutamine cyclotransfer 99.3 3.8E-09 1.3E-13 81.9 24.0 210 9-284 10-238 (266)
208 2bkl_A Prolyl endopeptidase; m 99.3 1.6E-09 5.4E-14 97.1 24.9 230 27-282 76-348 (695)
209 1mda_H Methylamine dehydrogena 99.3 1.1E-09 3.6E-14 89.7 21.5 258 8-290 56-353 (368)
210 2z2n_A Virginiamycin B lyase; 99.3 2.9E-08 9.9E-13 79.1 29.5 236 17-285 55-297 (299)
211 2mad_H Methylamine dehydrogena 99.3 9E-09 3.1E-13 84.9 26.7 122 25-189 27-165 (373)
212 3sjl_D Methylamine dehydrogena 99.3 8.7E-10 3E-14 90.2 19.9 199 24-285 38-258 (386)
213 3e5z_A Putative gluconolactona 99.2 2E-09 6.7E-14 86.1 20.0 188 52-305 19-235 (296)
214 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.7E-13 85.6 23.7 207 24-282 176-409 (409)
215 3nol_A Glutamine cyclotransfer 99.2 1.5E-08 5.2E-13 77.7 21.8 195 10-272 33-244 (262)
216 1yr2_A Prolyl oligopeptidase; 99.2 1.2E-08 4.1E-13 92.1 23.6 231 27-282 115-392 (741)
217 3c75_H MADH, methylamine dehyd 99.2 2.2E-08 7.5E-13 83.4 23.2 120 28-190 82-218 (426)
218 1rwi_B Serine/threonine-protei 99.1 2.3E-08 8E-13 78.5 21.5 216 64-306 25-252 (270)
219 1xip_A Nucleoporin NUP159; bet 99.1 9E-10 3.1E-14 90.4 13.5 149 64-286 39-194 (388)
220 2qc5_A Streptogramin B lactona 99.1 3.1E-07 1.1E-11 73.1 27.9 234 17-282 60-299 (300)
221 2ece_A 462AA long hypothetical 99.1 3.8E-08 1.3E-12 81.3 22.0 205 20-271 139-399 (462)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.8E-07 6.3E-12 77.3 25.1 226 29-290 102-344 (376)
223 3nok_A Glutaminyl cyclase; bet 99.1 3.7E-08 1.3E-12 75.5 19.1 194 9-270 44-253 (268)
224 3mbr_X Glutamine cyclotransfer 99.1 2.3E-07 7.9E-12 70.5 23.1 196 9-271 10-222 (243)
225 2ece_A 462AA long hypothetical 99.0 7.4E-08 2.5E-12 79.6 21.1 198 28-283 93-352 (462)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.8E-07 6.3E-12 75.1 23.3 214 64-304 19-285 (314)
227 1kb0_A Quinohemoprotein alcoho 99.0 2.8E-08 9.7E-13 88.4 18.4 58 231-290 457-514 (677)
228 2qe8_A Uncharacterized protein 99.0 1.7E-07 5.8E-12 76.5 21.6 232 16-280 64-318 (343)
229 2hz6_A Endoplasmic reticulum t 99.0 2.6E-10 8.9E-15 94.1 4.2 188 6-265 27-216 (369)
230 1mda_H Methylamine dehydrogena 98.9 1.1E-07 3.7E-12 77.9 18.5 63 32-100 34-110 (368)
231 3iuj_A Prolyl endopeptidase; h 98.9 1.6E-07 5.5E-12 84.1 21.2 200 22-286 178-408 (693)
232 2iwa_A Glutamine cyclotransfer 98.9 1.4E-06 4.9E-11 67.5 22.6 171 51-289 10-187 (266)
233 1yiq_A Quinohemoprotein alcoho 98.9 3.9E-07 1.3E-11 81.3 22.0 59 230-290 454-512 (689)
234 1fwx_A Nitrous oxide reductase 98.9 2.2E-07 7.5E-12 79.5 19.3 224 29-283 100-361 (595)
235 3nol_A Glutamine cyclotransfer 98.9 1.5E-06 5.1E-11 66.7 21.8 168 52-289 33-207 (262)
236 3nok_A Glutaminyl cyclase; bet 98.9 1.8E-06 6.2E-11 66.2 21.7 168 51-289 44-216 (268)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.9 5.1E-06 1.7E-10 68.6 26.4 235 29-290 52-303 (376)
238 3g4e_A Regucalcin; six bladed 98.8 6.9E-06 2.4E-10 65.4 25.0 181 64-307 14-218 (297)
239 1fwx_A Nitrous oxide reductase 98.8 3.5E-07 1.2E-11 78.3 17.2 222 19-286 134-434 (595)
240 1kb0_A Quinohemoprotein alcoho 98.8 8.9E-07 3.1E-11 78.8 20.2 213 22-267 246-534 (677)
241 3mbr_X Glutamine cyclotransfer 98.8 4.4E-06 1.5E-10 63.5 21.1 169 51-289 10-185 (243)
242 1npe_A Nidogen, entactin; glyc 98.8 3.2E-05 1.1E-09 60.5 27.7 207 19-290 36-245 (267)
243 3qqz_A Putative uncharacterize 98.7 3.4E-05 1.2E-09 59.4 24.5 220 13-281 21-251 (255)
244 1yiq_A Quinohemoprotein alcoho 98.7 2E-06 6.7E-11 76.8 20.2 214 23-267 239-532 (689)
245 2fp8_A Strictosidine synthase; 98.7 3.5E-05 1.2E-09 62.1 25.2 214 13-287 13-272 (322)
246 3hxj_A Pyrrolo-quinoline quino 98.7 3.8E-06 1.3E-10 67.8 19.5 217 30-285 107-326 (330)
247 2p4o_A Hypothetical protein; p 98.7 7.8E-05 2.7E-09 59.6 27.5 233 9-273 23-278 (306)
248 3dr2_A Exported gluconolactona 98.6 9.5E-06 3.2E-10 64.9 20.4 178 63-305 45-256 (305)
249 2ghs_A AGR_C_1268P; regucalcin 98.6 9.1E-05 3.1E-09 59.8 25.3 192 65-287 51-263 (326)
250 3hxj_A Pyrrolo-quinoline quino 98.6 1.2E-06 4E-11 70.8 13.5 237 8-288 9-248 (330)
251 2xe4_A Oligopeptidase B; hydro 98.5 1.1E-05 3.8E-10 72.9 18.8 198 20-281 175-398 (751)
252 2ad6_A Methanol dehydrogenase 98.5 3.9E-05 1.3E-09 66.9 20.6 60 229-290 442-501 (571)
253 3v65_B Low-density lipoprotein 98.4 0.00056 1.9E-08 56.6 28.1 206 19-289 116-324 (386)
254 1kv9_A Type II quinohemoprotei 98.4 0.00018 6.3E-09 64.0 23.5 76 22-99 233-337 (668)
255 1kv9_A Type II quinohemoprotei 98.3 0.00018 6.2E-09 64.0 22.0 211 30-289 66-339 (668)
256 1w6s_A Methanol dehydrogenase 98.3 0.00012 4E-09 64.1 20.2 60 229-290 451-510 (599)
257 3amr_A 3-phytase; beta-propell 98.3 0.00096 3.3E-08 53.6 23.3 197 29-286 39-267 (355)
258 1flg_A Protein (quinoprotein e 98.3 0.00012 4.2E-09 63.9 19.2 59 230-290 465-523 (582)
259 3v64_C Agrin; beta propeller, 98.2 0.0013 4.6E-08 53.5 28.5 243 19-289 34-281 (349)
260 2fp8_A Strictosidine synthase; 98.2 0.00099 3.4E-08 53.5 22.3 111 154-285 190-315 (322)
261 1flg_A Protein (quinoprotein e 98.2 0.0011 3.7E-08 58.0 23.5 77 171-266 465-542 (582)
262 1npe_A Nidogen, entactin; glyc 98.2 0.0013 4.5E-08 51.2 24.6 180 19-265 79-263 (267)
263 1w6s_A Methanol dehydrogenase 98.2 0.00087 3E-08 58.6 22.3 212 30-290 62-349 (599)
264 2ad6_A Methanol dehydrogenase 98.1 0.0011 3.6E-08 57.9 21.0 210 30-289 62-341 (571)
265 3tc9_A Hypothetical hydrolase; 98.0 0.0044 1.5E-07 52.0 22.8 157 20-239 138-300 (430)
266 1k3i_A Galactose oxidase precu 98.0 0.00082 2.8E-08 59.8 19.2 73 23-98 190-277 (656)
267 3v65_B Low-density lipoprotein 98.0 0.0046 1.6E-07 51.1 26.7 197 21-285 79-279 (386)
268 2xe4_A Oligopeptidase B; hydro 97.9 0.00091 3.1E-08 60.5 17.9 159 64-283 175-354 (751)
269 3sov_A LRP-6, low-density lipo 97.9 0.0064 2.2E-07 48.7 25.8 205 20-288 36-243 (318)
270 3kya_A Putative phosphatase; s 97.9 0.0095 3.2E-07 50.5 25.1 206 20-281 140-408 (496)
271 4a2l_A BT_4663, two-component 97.9 0.016 5.4E-07 52.8 31.0 240 21-286 175-439 (795)
272 1n7d_A LDL receptor, low-densi 97.8 0.00078 2.7E-08 60.2 15.9 227 39-290 385-621 (699)
273 4hw6_A Hypothetical protein, I 97.8 0.011 3.7E-07 49.7 26.5 199 20-281 140-372 (433)
274 3tc9_A Hypothetical hydrolase; 97.8 0.0097 3.3E-07 49.9 21.7 217 11-282 171-429 (430)
275 4hw6_A Hypothetical protein, I 97.8 0.011 3.6E-07 49.7 21.5 219 11-282 174-432 (433)
276 3p5b_L Low density lipoprotein 97.8 0.012 4.1E-07 48.8 29.2 209 17-289 110-326 (400)
277 1ijq_A LDL receptor, low-densi 97.7 0.011 3.6E-07 47.4 28.8 207 18-289 29-244 (316)
278 3m0c_C LDL receptor, low-densi 97.7 0.032 1.1E-06 50.5 29.8 210 17-290 422-639 (791)
279 3v64_C Agrin; beta propeller, 97.6 0.017 5.8E-07 46.9 25.4 215 19-260 73-294 (349)
280 3ei3_A DNA damage-binding prot 97.6 0.054 1.9E-06 51.3 26.8 76 18-94 553-635 (1158)
281 3qqz_A Putative uncharacterize 97.5 0.017 5.8E-07 44.4 22.8 188 64-305 28-241 (255)
282 1k3i_A Galactose oxidase precu 97.5 0.0036 1.2E-07 55.7 15.9 74 21-97 245-325 (656)
283 3m0c_C LDL receptor, low-densi 97.5 0.049 1.7E-06 49.3 27.5 185 40-286 404-592 (791)
284 4a0p_A LRP6, LRP-6, low-densit 97.5 0.042 1.4E-06 48.4 27.5 204 19-288 37-242 (628)
285 1n7d_A LDL receptor, low-densi 97.5 0.0023 8E-08 57.2 14.1 218 19-260 406-633 (699)
286 2ism_A Putative oxidoreductase 97.5 0.032 1.1E-06 45.4 23.5 79 12-95 24-114 (352)
287 4a2l_A BT_4663, two-component 97.4 0.067 2.3E-06 48.7 32.3 244 18-286 214-483 (795)
288 2p9w_A MAL S 1 allergenic prot 97.4 0.017 5.7E-07 46.0 16.4 103 171-286 99-218 (334)
289 1ijq_A LDL receptor, low-densi 97.3 0.041 1.4E-06 43.9 27.1 189 33-284 4-196 (316)
290 3p5b_L Low density lipoprotein 97.3 0.056 1.9E-06 44.8 27.4 191 32-285 85-279 (400)
291 3s94_A LRP-6, low-density lipo 97.3 0.086 3E-06 46.4 24.0 207 19-289 40-249 (619)
292 3sov_A LRP-6, low-density lipo 97.2 0.055 1.9E-06 43.3 24.1 181 39-284 12-198 (318)
293 3v9f_A Two-component system se 97.1 0.15 5.1E-06 46.3 28.2 242 18-286 312-571 (781)
294 2p4o_A Hypothetical protein; p 97.1 0.073 2.5E-06 42.2 23.7 187 51-306 23-230 (306)
295 2p9w_A MAL S 1 allergenic prot 97.1 0.078 2.7E-06 42.3 24.9 216 13-283 7-265 (334)
296 3v9f_A Two-component system se 97.1 0.17 5.8E-06 46.0 29.7 238 18-286 257-527 (781)
297 3kya_A Putative phosphatase; s 97.0 0.12 4.1E-06 43.9 22.4 63 223-288 393-480 (496)
298 3sre_A PON1, serum paraoxonase 97.0 0.11 3.7E-06 42.1 18.8 52 252-303 220-282 (355)
299 3a9g_A Putative uncharacterize 97.0 0.11 3.9E-06 42.1 26.0 80 12-95 22-114 (354)
300 2be1_A Serine/threonine-protei 96.9 0.005 1.7E-07 49.5 9.0 66 31-97 11-78 (339)
301 3ei3_A DNA damage-binding prot 96.7 0.41 1.4E-05 45.5 22.9 103 160-283 895-999 (1158)
302 2xzh_A Clathrin heavy chain 1; 96.6 0.19 6.5E-06 40.0 27.1 239 24-287 72-336 (365)
303 3pbp_A Nucleoporin NUP82; beta 96.4 0.13 4.5E-06 42.5 14.0 116 154-281 71-210 (452)
304 3amr_A 3-phytase; beta-propell 96.4 0.28 9.6E-06 39.5 19.7 109 163-282 88-209 (355)
305 3pbp_A Nucleoporin NUP82; beta 96.3 0.34 1.2E-05 40.1 15.7 76 20-96 67-159 (452)
306 2vpj_A Kelch-like protein 12; 96.2 0.35 1.2E-05 38.0 17.8 65 29-97 14-89 (301)
307 2xn4_A Kelch-like protein 2; s 96.1 0.36 1.2E-05 37.9 20.1 65 29-97 61-135 (302)
308 2xzh_A Clathrin heavy chain 1; 96.0 0.45 1.5E-05 37.9 23.7 223 37-289 46-296 (365)
309 2vpj_A Kelch-like protein 12; 95.9 0.45 1.6E-05 37.3 19.9 60 223-286 209-281 (301)
310 3ii7_A Kelch-like protein 7; p 95.8 0.5 1.7E-05 37.2 22.8 65 29-97 55-129 (306)
311 2xn4_A Kelch-like protein 2; s 95.6 0.61 2.1E-05 36.6 16.8 64 30-97 16-88 (302)
312 2xbg_A YCF48-like protein; pho 95.4 0.78 2.7E-05 36.6 24.0 66 206-280 251-319 (327)
313 1bpo_A Protein (clathrin); cla 95.4 0.99 3.4E-05 37.6 26.1 240 23-287 70-335 (494)
314 3s94_A LRP-6, low-density lipo 95.0 1.8 6.1E-05 38.2 25.6 202 19-285 349-553 (619)
315 1bpo_A Protein (clathrin); cla 94.8 1.5 5E-05 36.6 25.0 223 37-289 45-295 (494)
316 1zgk_A Kelch-like ECH-associat 94.7 1.2 4.1E-05 35.1 18.7 65 29-97 70-148 (308)
317 4a0p_A LRP6, LRP-6, low-densit 94.6 2.2 7.5E-05 37.6 27.3 206 19-287 340-553 (628)
318 1zgk_A Kelch-like ECH-associat 94.6 1.3 4.5E-05 34.8 17.8 65 29-97 24-101 (308)
319 4asc_A Kelch repeat and BTB do 94.2 1.6 5.5E-05 34.4 18.5 67 27-97 43-128 (315)
320 2g8s_A Glucose/sorbosone dehyd 94.2 1.8 6.1E-05 35.0 26.8 61 10-72 9-75 (353)
321 2g8s_A Glucose/sorbosone dehyd 93.4 2.5 8.7E-05 34.1 16.6 28 65-94 20-47 (353)
322 3ii7_A Kelch-like protein 7; p 93.4 2.3 7.8E-05 33.3 17.6 62 32-97 14-81 (306)
323 1cru_A Protein (soluble quinop 93.2 3.4 0.00012 34.8 17.7 30 65-96 29-58 (454)
324 3sre_A PON1, serum paraoxonase 93.1 3 0.0001 33.8 23.2 71 206-281 222-296 (355)
325 2woz_A Kelch repeat and BTB do 92.9 2.8 9.7E-05 33.0 19.3 67 27-97 54-138 (318)
326 2uvk_A YJHT; unknown function, 92.8 3.1 0.00011 33.4 17.2 56 232-289 286-348 (357)
327 4asc_A Kelch repeat and BTB do 92.5 3.1 0.00011 32.7 20.1 62 32-98 7-79 (315)
328 2be1_A Serine/threonine-protei 92.3 0.44 1.5E-05 38.3 7.2 109 167-290 15-137 (339)
329 4gq2_M Nucleoporin NUP120; bet 92.3 2.9 0.0001 38.9 13.5 38 20-57 237-274 (950)
330 1xi4_A Clathrin heavy chain; a 92.1 9.4 0.00032 37.2 17.8 247 24-288 71-336 (1630)
331 1tl2_A L10, protein (tachylect 92.0 2.3 7.9E-05 31.8 10.0 108 154-279 46-159 (236)
332 1cru_A Protein (soluble quinop 91.5 5.7 0.00019 33.4 28.4 72 10-83 18-98 (454)
333 3sbq_A Nitrous-oxide reductase 91.5 1 3.4E-05 38.8 8.6 109 154-271 328-453 (638)
334 3das_A Putative oxidoreductase 91.4 4.7 0.00016 32.5 18.1 31 64-96 33-63 (347)
335 2zwa_A Leucine carboxyl methyl 90.6 9.2 0.00031 34.2 20.1 68 28-97 396-479 (695)
336 1xi4_A Clathrin heavy chain; a 90.3 7 0.00024 38.0 13.7 178 38-284 46-236 (1630)
337 3das_A Putative oxidoreductase 88.7 8.2 0.00028 31.1 29.3 83 11-95 24-116 (347)
338 2ism_A Putative oxidoreductase 87.9 9.4 0.00032 30.7 21.4 51 220-271 278-333 (352)
339 2woz_A Kelch repeat and BTB do 87.5 9 0.00031 30.1 18.8 60 32-97 18-89 (318)
340 3ott_A Two-component system se 87.1 17 0.00057 32.8 22.9 71 18-97 21-93 (758)
341 2xbg_A YCF48-like protein; pho 87.0 10 0.00034 30.1 25.1 67 18-90 35-103 (327)
342 1tl2_A L10, protein (tachylect 85.2 3.2 0.00011 31.0 6.8 89 206-305 42-152 (236)
343 2wg3_C Hedgehog-interacting pr 84.4 17 0.00058 30.6 11.8 114 154-273 19-159 (463)
344 4gq2_M Nucleoporin NUP120; bet 84.2 15 0.00052 34.2 12.4 36 254-289 237-272 (950)
345 3sbq_A Nitrous-oxide reductase 83.8 8 0.00027 33.4 9.3 68 213-284 330-409 (638)
346 3ott_A Two-component system se 82.9 27 0.00091 31.5 23.9 200 19-285 63-262 (758)
347 4fhn_B Nucleoporin NUP120; pro 82.6 1.7 5.7E-05 41.5 5.5 39 19-57 238-276 (1139)
348 3a9g_A Putative uncharacterize 82.2 18 0.00062 29.1 22.1 51 220-271 277-330 (354)
349 2zwa_A Leucine carboxyl methyl 79.9 33 0.0011 30.6 14.5 66 29-97 451-524 (695)
350 4fhn_B Nucleoporin NUP120; pro 79.7 7.2 0.00025 37.2 8.7 36 254-289 239-274 (1139)
351 3f7f_A Nucleoporin NUP120; nuc 78.3 4.4 0.00015 36.1 6.2 38 19-58 222-259 (729)
352 3zwu_A Alkaline phosphatase PH 77.9 15 0.0005 32.1 9.3 58 22-82 479-548 (592)
353 3al9_A Plexin-A2; beta-propell 73.8 9.7 0.00033 32.8 7.1 70 19-90 400-476 (539)
354 4gz8_A Semaphorin-3A; multi-do 72.2 28 0.00095 30.9 9.6 81 8-90 401-495 (667)
355 3q6k_A 43.2 kDa salivary prote 71.4 40 0.0014 27.5 18.7 119 164-283 173-306 (381)
356 4a9v_A PHOX; hydrolase, beta-p 69.3 44 0.0015 29.1 9.9 62 19-83 476-549 (592)
357 2uvk_A YJHT; unknown function, 67.4 45 0.0015 26.5 12.6 22 160-181 19-40 (357)
358 1q47_A Semaphorin 3A; beta pro 66.9 28 0.00096 29.6 8.3 81 8-90 393-487 (495)
359 3f7f_A Nucleoporin NUP120; nuc 65.6 9.5 0.00033 34.0 5.3 34 254-289 223-256 (729)
360 3ol2_B Plexin-B1; beta-propell 65.1 18 0.00061 31.1 6.8 81 5-90 375-461 (528)
361 3oky_A Plexin-A2; transmembran 61.4 25 0.00086 31.3 7.2 69 20-90 400-475 (681)
362 4hvt_A Ritya.17583.B, post-pro 58.0 1.1E+02 0.0036 27.6 17.2 56 229-285 318-383 (711)
363 3oky_B Putative uncharacterize 55.2 66 0.0023 27.9 8.6 83 7-91 391-496 (565)
364 3qhy_B Beta-lactamase inhibito 51.5 81 0.0028 24.3 17.9 53 229-285 196-248 (282)
365 3s25_A Hypothetical 7-bladed b 47.2 1E+02 0.0034 24.1 22.4 215 27-284 22-256 (302)
366 1q47_A Semaphorin 3A; beta pro 42.5 97 0.0033 26.4 7.7 56 223-278 423-487 (495)
367 4a9v_A PHOX; hydrolase, beta-p 42.0 1.3E+02 0.0044 26.3 8.2 61 206-271 477-549 (592)
368 3zwu_A Alkaline phosphatase PH 41.4 1.1E+02 0.0038 26.7 8.0 38 232-270 510-548 (592)
369 3q6k_A 43.2 kDa salivary prote 41.0 1.5E+02 0.005 24.2 19.3 80 19-98 87-193 (381)
370 3nvq_A Semaphorin-7A; beta-pro 34.7 1.4E+02 0.0047 26.1 7.4 70 20-91 363-445 (590)
371 1olz_A Semaphorin 4D; developm 34.4 1.2E+02 0.0042 26.9 7.3 56 223-278 417-477 (663)
372 4gz8_A Semaphorin-3A; multi-do 30.0 1.8E+02 0.0063 25.8 7.6 56 223-278 431-495 (667)
373 3qhy_B Beta-lactamase inhibito 26.4 2.2E+02 0.0075 21.8 17.1 67 20-96 25-91 (282)
374 3nvq_A Semaphorin-7A; beta-pro 26.1 2.5E+02 0.0085 24.6 7.6 56 223-278 382-444 (590)
375 2wg3_C Hedgehog-interacting pr 24.3 3.2E+02 0.011 22.9 26.8 54 19-72 14-78 (463)
376 3al9_A Plexin-A2; beta-propell 22.2 1.5E+02 0.005 25.6 5.5 57 222-278 414-476 (539)
377 4fww_A Macrophage-stimulating 20.3 93 0.0032 26.6 3.9 70 18-90 404-479 (527)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-41 Score=272.52 Aligned_cols=259 Identities=15% Similarity=0.184 Sum_probs=212.6
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
+..++|++|.+.|++++|+|++++|++|+.||+|++||+++++.+..+..|... |.+++|+| ++++|++|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP--VRAGKFIA--RKNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEEEG--GGTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc--EEEEEEeC--CCCEEEEECCCCEE
Confidence 567899999999999999999999999999999999999999999999999854 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCceE
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYM 164 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (314)
++||+++++.+. .+..+........+++... ........+...+|++.........+.+|.. ++|+|.+..++
T Consensus 80 ~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 80 RVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EEEECCCCcEEE--EEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 999999987643 3333444444455554432 2334555677889999887777777788877 88999655555
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
+ +|+.|++|++||++++.....+.. +| ...+..+. |+|... +. +|++|+.|+.|++||+++ +++
T Consensus 157 ~-sgs~D~~v~iwd~~~~~~~~~~~~-------~~----~~~v~~~~-~~~~~~-~~-~l~s~s~D~~i~iWd~~~-~~~ 220 (304)
T 2ynn_A 157 A-SGCLDRTVKVWSLGQSTPNFTLTT-------GQ----ERGVNYVD-YYPLPD-KP-YMITASDDLTIKIWDYQT-KSC 220 (304)
T ss_dssp E-EEETTSEEEEEETTCSSCSEEEEC-------CC----TTCEEEEE-ECCSTT-CC-EEEEEETTSEEEEEETTT-TEE
T ss_pred E-EEeCCCeEEEEECCCCCccceecc-------CC----cCcEEEEE-EEEcCC-CC-EEEEEcCCCeEEEEeCCC-Ccc
Confidence 5 677799999999998877666552 23 23456666 887522 44 899999999999999998 889
Q ss_pred eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+..+.+|...|.+++|+|++.+|++|+.||.|++||+.+++.+...
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 9999999999999999999999999999999999999998877653
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.3e-40 Score=276.11 Aligned_cols=270 Identities=16% Similarity=0.219 Sum_probs=216.5
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEE
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 89 (314)
....+.+|.++|++++|+|++++|++|+.||+|+|||+.+++....+.+|... |.+++|+| ++++|++|+.|++|+
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~--V~~v~~~~--~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDH--SGKLLASCSADMTIK 175 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSC--EEEEEECT--TSSEEEEEETTSCCC
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCc--EEEEEEcC--CCCEEEEEeCCCeEE
Confidence 45678999999999999999999999999999999999999999999999855 99999999 999999999999999
Q ss_pred EEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCceEE
Q 021291 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMA 165 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (314)
+||+.++++.. .+..+........+.+... ........+...+|++..+.... .+.+|.. ++++|++..++
T Consensus 176 iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~-~~~~h~~~v~~~~~~~~g~~l~- 250 (410)
T 1vyh_C 176 LWDFQGFECIR--TMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVK-TFTGHREWVRMVRPNQDGTLIA- 250 (410)
T ss_dssp EEETTSSCEEE--CCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECTTSSEEE-
T ss_pred EEeCCCCceeE--EEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEE-EEeCCCccEEEEEECCCCCEEE-
Confidence 99999876543 2223333444444444332 22334455677888887766443 3455655 78889886443
Q ss_pred EeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCC-----------------CCceEEEEee
Q 021291 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS-----------------QGFVNVLAGY 228 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~-----------------~g~~~l~~g~ 228 (314)
+|+.|+.|++||+++++....+. +| ...+.++. |+|+.. .|. +|++|+
T Consensus 251 -s~s~D~~v~vwd~~~~~~~~~~~--------~h----~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs 315 (410)
T 1vyh_C 251 -SCSNDQTVRVWVVATKECKAELR--------EH----RHVVECIS-WAPESSYSSISEATGSETKKSGKPGP-FLLSGS 315 (410)
T ss_dssp -EEETTSCEEEEETTTCCEEEEEC--------CC----SSCEEEEE-ECCSCGGGGGGGCCSCC-------CC-EEEEEE
T ss_pred -EEcCCCeEEEEECCCCceeeEec--------CC----CceEEEEE-EcCcccccchhhhccccccccCCCCC-EEEEEe
Confidence 67779999999999999888887 56 44788887 998632 144 899999
Q ss_pred cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCce
Q 021291 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGNK 301 (314)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~ 301 (314)
.|+.|++||+++ +.++..+.+|...|++++|+|++.+|++|+.||.|++||+.+++.+... ..++++|++..
T Consensus 316 ~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 316 RDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred CCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCE
Confidence 999999999998 8899999999999999999999999999999999999999988876653 44557777766
Q ss_pred ece
Q 021291 302 FGT 304 (314)
Q Consensus 302 ~~~ 304 (314)
+++
T Consensus 395 l~s 397 (410)
T 1vyh_C 395 VVT 397 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-38 Score=262.26 Aligned_cols=271 Identities=15% Similarity=0.223 Sum_probs=213.5
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
+.+..++|++|.+.|++++|+|++++|++|+.||+|+|||+.+++.+..+..|... |.+++|+| ++++|++++.|+
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~s~~~d~ 119 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSW--VMTCAYAP--SGNYVACGGLDN 119 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSC--EEEEEECT--TSSEEEEEETTC
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCcc--EEEEEECC--CCCEEEEEeCCC
Confidence 34678899999999999999999999999999999999999999999999988854 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeec--ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCC
Q 021291 87 TVKCWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEG 160 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 160 (314)
.|++||+.+.+........+.. .....+.+.. ..........+...+|++...... ..+.+|.. ++|+|++
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD--DNQIVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTS
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECC--CCcEEEEECCCcEEEEECCCCcEE-EEEcCCCCceEEEEECCCC
Confidence 9999999876432211222222 2333333332 222344455677888888776544 34556665 8899998
Q ss_pred CceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 161 ~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
+.++ +|+.|+.|++||++++.....+. +| ...+.+++ |+|+ +. +|++|+.||.|++||++.
T Consensus 197 ~~l~--sg~~d~~v~~wd~~~~~~~~~~~--------~h----~~~v~~v~-~~p~---~~-~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 197 RLFV--SGACDASAKLWDVREGMCRQTFT--------GH----ESDINAIC-FFPN---GN-AFATGSDDATCRLFDLRA 257 (340)
T ss_dssp SEEE--EEETTSCEEEEETTTCSEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT
T ss_pred CEEE--EEeCCCcEEEEECCCCeeEEEEc--------CC----cCCEEEEE-EcCC---CC-EEEEEcCCCcEEEEECCC
Confidence 6433 67779999999999999888887 66 44688887 9998 44 899999999999999997
Q ss_pred CCCceEeee--cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCceece
Q 021291 241 PGIPLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGNKFGT 304 (314)
Q Consensus 241 ~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~ 304 (314)
++.+..+. .+...|++++|+|++++|++|+.||.|++||+.+++.+... ..++++|+|..+++
T Consensus 258 -~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 258 -DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp -TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred -CcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 66665554 23357999999999999999999999999999988876653 33567788876655
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=264.30 Aligned_cols=269 Identities=16% Similarity=0.187 Sum_probs=207.1
Q ss_pred CCceEEecCCCCceeEEEEccC----CCEEEEecCCCeEEEEeCCCCeE--EEEEeccCCcccEEEEEEcccCCCCeEEE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~----~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 81 (314)
+...+.+++|.+.|++++|+|+ +.+|+||+.|++|+|||+.+++. ...+.+|... |.+++|++ ++..+++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~--v~~~~~~~--~~~~l~s 97 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLG--VVSVDISH--TLPIAAS 97 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECS--SSSEEEE
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCC--EEEEEECC--CCCEEEE
Confidence 3456778899999999999974 67999999999999999987654 4467788844 99999999 9999999
Q ss_pred eecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 82 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
++.|++|++||+++++... .+...........+++.... .......+...+|++......... ..+.. ++|+
T Consensus 98 ~s~D~~i~lWd~~~~~~~~--~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~s 173 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIK--SIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYS 173 (321)
T ss_dssp EETTSEEEEEETTTTEEEE--EEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEEC
T ss_pred EeCCCcEEEEECCCCCEEE--EEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEEC
Confidence 9999999999999886533 22222222333334333221 222333455677777766544332 23332 8999
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
|+++.++ +|+.|+.|++||+++++.+..+. +|. ..+.+++ |+|+ ++ +|++|+.|+.|++||
T Consensus 174 pdg~~la--sg~~dg~i~iwd~~~~~~~~~~~--------~h~----~~v~~l~-~spd---~~-~l~s~s~dg~i~iwd 234 (321)
T 3ow8_A 174 PDGKYLA--SGAIDGIINIFDIATGKLLHTLE--------GHA----MPIRSLT-FSPD---SQ-LLVTASDDGYIKIYD 234 (321)
T ss_dssp TTSSEEE--EEETTSCEEEEETTTTEEEEEEC--------CCS----SCCCEEE-ECTT---SC-EEEEECTTSCEEEEE
T ss_pred CCCCEEE--EEcCCCeEEEEECCCCcEEEEEc--------ccC----CceeEEE-EcCC---CC-EEEEEcCCCeEEEEE
Confidence 9997544 57779999999999999988887 663 4677787 9998 55 899999999999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCceece
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGNKFGT 304 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~ 304 (314)
++. +..+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.+... ..+++++++..+++
T Consensus 235 ~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 235 VQH-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp TTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCC-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 998 7888999999999999999999999999999999999999999887653 44567787776654
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=264.90 Aligned_cols=245 Identities=13% Similarity=0.121 Sum_probs=188.8
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEE----EeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS----SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 91 (314)
.|...|.+++|+|++ .|++|+.||+|+|||+++++.+.. +.+|. ..|.+++|+| ++++|++|+.|++|++|
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~sp--dg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLS--SGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECT--TSSEEEEEETTSCEEEE
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECC--CCCEEEEEeCCCeEEEE
Confidence 366789999999986 788999999999999998865433 34677 4599999999 99999999999999999
Q ss_pred eCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecC-CCCCC----ceeccCCCceEEE
Q 021291 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS-LCDSK----DDVPAEGPKYMAV 166 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~ 166 (314)
|+++++++. .+..+........+++............+...+|+++..+...... ..+.. ++|+|++..+++
T Consensus 155 d~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~- 231 (344)
T 4gqb_B 155 DLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV- 231 (344)
T ss_dssp ETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE-
T ss_pred ECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE-
Confidence 999987644 3333444455555555544444455566788899998776554432 22322 889998877765
Q ss_pred eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceE
Q 021291 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (314)
Q Consensus 167 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (314)
+|+.|+.|++||+++++++..+. +| ...+.+++ |+|+ +..+|++|+.|++|+|||+++ ++ +.
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~--------~h----~~~v~~v~-fsp~---g~~~lasgs~D~~i~vwd~~~-~~-~~ 293 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSA--------VH----SQCVTGLV-FSPH---SVPFLASLSEDCSLAVLDSSL-SE-LF 293 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEE--------CC----SSCEEEEE-ECSS---SSCCEEEEETTSCEEEECTTC-CE-EE
T ss_pred EeccCCcEEEEECCCCcEEEEEc--------CC----CCCEEEEE-EccC---CCeEEEEEeCCCeEEEEECCC-Cc-EE
Confidence 67779999999999999999888 77 44788887 9998 433899999999999999987 54 45
Q ss_pred eeecCCcceEEEEEeCCCC-eEEEecCCCcEEEEecCCCee
Q 021291 247 AMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.+.+|.+.|++++|+|++. +|+|+|.||+|++|++.+...
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 6789999999999999986 467999999999999987643
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-38 Score=266.13 Aligned_cols=277 Identities=16% Similarity=0.242 Sum_probs=212.1
Q ss_pred CCCCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
|....+.++|+||.+.|++++|+|++++|++|+.||+|+|||+.+++....+..|... |.+++|+| ++++|++|+.
T Consensus 53 ~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~--v~~~~~s~--~g~~las~~~ 128 (380)
T 3iz6_a 53 PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW--VMECAFAP--NGQSVACGGL 128 (380)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT--CCCCEECT--TSSEEEECCS
T ss_pred cceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC--EEEEEECC--CCCEEEEeeC
Confidence 4445678899999999999999999999999999999999999999999999999855 99999999 9999999999
Q ss_pred CCeEEEEeCCCCCCC-----CCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec----CCCCCC--
Q 021291 85 DGTVKCWDIENGGLS-----SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD----SLCDSK-- 153 (314)
Q Consensus 85 dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-- 153 (314)
|+.+++||+.+.... ....+..+......+.+.+............+...+|++..+...... ..+|..
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 999999999764311 111222333333334444433333445556677888998877654332 245555
Q ss_pred --ceeccCCCceEEEeecCcCeEEEEecC-CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 --DDVPAEGPKYMAVAGEQLSEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 --~~~~~~~~~~~~~~g~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
++|++.+..+++ +|+.|++|++||++ ..+.+..+. +| ...+.++. |+|+ +. +|++|+.|
T Consensus 209 ~~~~~~~~~~~~l~-sgs~D~~v~~wd~~~~~~~~~~~~--------~h----~~~v~~v~-~~p~---~~-~l~s~s~D 270 (380)
T 3iz6_a 209 LSLSINSLNANMFI-SGSCDTTVRLWDLRITSRAVRTYH--------GH----EGDINSVK-FFPD---GQ-RFGTGSDD 270 (380)
T ss_dssp EEEEECSSSCCEEE-EEETTSCEEEEETTTTCCCCEEEC--------CC----SSCCCEEE-ECTT---SS-EEEEECSS
T ss_pred EEEEeecCCCCEEE-EEECCCeEEEEECCCCCcceEEEC--------Cc----CCCeEEEE-EecC---CC-eEEEEcCC
Confidence 667664444554 67789999999998 446666676 67 44677887 9998 55 89999999
Q ss_pred CcEEEEEccCCCCceEeeecCC-------cceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe-----------eee
Q 021291 231 GSILVWDIRNPGIPLTAMKVHL-------EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF-----------GIG 292 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-----------~~~ 292 (314)
|+|++||+++ +.++..+..+. ..|++++|+|++.+|++|+.||.|++||+..++.+.. +..
T Consensus 271 ~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 271 GTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISC 349 (380)
T ss_dssp SCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCE
T ss_pred CeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEE
Confidence 9999999998 77777766543 2489999999999999999999999999988876653 234
Q ss_pred eeecCCCceece
Q 021291 293 FVCDQEGNKFGT 304 (314)
Q Consensus 293 ~~~~~~~~~~~~ 304 (314)
++++|+|..+++
T Consensus 350 l~~s~dg~~l~s 361 (380)
T 3iz6_a 350 LGLSSDGSALCT 361 (380)
T ss_dssp EEECSSSSEEEE
T ss_pred EEECCCCCEEEE
Confidence 567788877665
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-38 Score=267.77 Aligned_cols=249 Identities=18% Similarity=0.310 Sum_probs=200.2
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++.++++++|.+.|++++|+|++++|++|+.||+|+|||+.+++++..+.+|... |.+++|+| ++++|++|+.|+
T Consensus 139 ~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~--V~~v~~~p--~~~~l~s~s~D~ 214 (410)
T 1vyh_C 139 TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVSIMP--NGDHIVSASRDK 214 (410)
T ss_dssp TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC--EEEEEECS--SSSEEEEEETTS
T ss_pred CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCC--EEEEEEeC--CCCEEEEEeCCC
Confidence 35678899999999999999999999999999999999999999999999999855 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCC-
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGP- 161 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~- 161 (314)
+|++||++++.+.. .+..+........+++... ........+...+|++....... .+.+|.. ++|+|++.
T Consensus 215 ~i~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~ 290 (410)
T 1vyh_C 215 TIKMWEVQTGYCVK--TFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKA-ELREHRHVVECISWAPESSY 290 (410)
T ss_dssp EEEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECCSCGG
T ss_pred eEEEEECCCCcEEE--EEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceee-EecCCCceEEEEEEcCcccc
Confidence 99999999987543 2222222333333322221 22334445677888887765433 3455555 78888632
Q ss_pred ------------------ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceE
Q 021291 162 ------------------KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (314)
Q Consensus 162 ------------------~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~ 223 (314)
.++ ++|+.|+.|++||++++.++..+. +| ...+.++. |+|+ |+ +
T Consensus 291 ~~~~~~~~~~~~~~~~~g~~l-~sgs~D~~i~iwd~~~~~~~~~~~--------~h----~~~v~~v~-~~~~---g~-~ 352 (410)
T 1vyh_C 291 SSISEATGSETKKSGKPGPFL-LSGSRDKTIKMWDVSTGMCLMTLV--------GH----DNWVRGVL-FHSG---GK-F 352 (410)
T ss_dssp GGGGGCCSCC-------CCEE-EEEETTSEEEEEETTTTEEEEEEE--------CC----SSCEEEEE-ECSS---SS-C
T ss_pred cchhhhccccccccCCCCCEE-EEEeCCCeEEEEECCCCceEEEEE--------CC----CCcEEEEE-EcCC---CC-E
Confidence 233 367789999999999999998888 67 34678887 9998 55 8
Q ss_pred EEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 224 l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
|++|+.||.|++||+++ ++++..+.+|...|++++|+|++.+|++|+.||.|++|+++
T Consensus 353 l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 353 ILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999988 88899999999999999999999999999999999999864
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=253.90 Aligned_cols=245 Identities=17% Similarity=0.228 Sum_probs=200.5
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEE
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 89 (314)
+...+.+|...|.+++|++++.++++++.|++|++||+.+++++..+..+... +.+++|+| ++++|++++.||.|+
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~sp--dg~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSP--DSQYLATGTHVGKVN 147 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC--CCCEEECT--TSSEEEEECTTSEEE
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCcc--EEEEEECC--CCCEEEEEcCCCcEE
Confidence 35578999999999999999999999999999999999999999999888744 99999999 999999999999999
Q ss_pred EEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCceEE
Q 021291 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMA 165 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (314)
+||+++++... .+..+........+++.+.. .......+...+|++...+... .+.+|.. ++|+|+++.++
T Consensus 148 i~~~~~~~~~~--~~~~~~~~v~~~~~spdg~~-lasg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spd~~~l~- 222 (321)
T 3ow8_A 148 IFGVESGKKEY--SLDTRGKFILSIAYSPDGKY-LASGAIDGIINIFDIATGKLLH-TLEGHAMPIRSLTFSPDSQLLV- 222 (321)
T ss_dssp EEETTTCSEEE--EEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE-EECCCSSCCCEEEECTTSCEEE-
T ss_pred EEEcCCCceeE--EecCCCceEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEE-EEcccCCceeEEEEcCCCCEEE-
Confidence 99999876432 22222233334444443322 2233445667888887765443 4455654 89999987443
Q ss_pred EeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCce
Q 021291 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (314)
+|+.|+.|++||+++++....+. +| ...+.+++ |+|+ +. +|++|+.|+.|++||+++ ++++
T Consensus 223 -s~s~dg~i~iwd~~~~~~~~~~~--------~h----~~~v~~~~-~sp~---~~-~l~s~s~D~~v~iwd~~~-~~~~ 283 (321)
T 3ow8_A 223 -TASDDGYIKIYDVQHANLAGTLS--------GH----ASWVLNVA-FCPD---DT-HFVSSSSDKSVKVWDVGT-RTCV 283 (321)
T ss_dssp -EECTTSCEEEEETTTCCEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT-TEEE
T ss_pred -EEcCCCeEEEEECCCcceeEEEc--------CC----CCceEEEE-ECCC---CC-EEEEEeCCCcEEEEeCCC-CEEE
Confidence 67789999999999999888887 67 44788887 9998 55 899999999999999998 8899
Q ss_pred EeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
..+.+|...|++++|+|++.+|++++.||.|++||..
T Consensus 284 ~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 284 HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999964
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-38 Score=263.66 Aligned_cols=252 Identities=13% Similarity=0.144 Sum_probs=185.5
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEE----EEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS----SSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.....+|...|++++|+|++. +++++.||+|+|||+.+++... ...+|. ..|.+++|+| ++++|++++.|+
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~--~~V~~v~~sp--dg~~l~sgs~dg 161 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHD--DIVKTLSVFS--DGTQAVSGGKDF 161 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCS--SCEEEEEECS--SSSEEEEEETTS
T ss_pred ecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCC--CCEEEEEECC--CCCEEEEEeCCC
Confidence 344567999999999999985 5567889999999998876543 233566 5599999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec-CCCCCC----ceeccCCC
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-SLCDSK----DDVPAEGP 161 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~ 161 (314)
+|++||+++++... .+..+........+++............+...+|+++..+..... ...+.. ++|+|++.
T Consensus 162 ~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 162 SVKVWDLSQKAVLK--SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp CEEEEETTTTEEEE--EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred eEEEEECCCCcEEE--EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 99999999887543 333334444444555444444445556677888888776644332 233333 88999987
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (314)
.+++ +|+.|+.|++||+++++.+..+. +| ...+.+++ |+|+ +..+|++|+.|++|+|||+++
T Consensus 240 ~~la-~g~~d~~i~~wd~~~~~~~~~~~--------~~----~~~v~~l~-~sp~---~~~~lasgs~D~~i~iwd~~~- 301 (357)
T 4g56_B 240 DTFA-CGDETGNVSLVNIKNPDSAQTSA--------VH----SQNITGLA-YSYH---SSPFLASISEDCTVAVLDADF- 301 (357)
T ss_dssp TEEE-EEESSSCEEEEESSCGGGCEEEC--------CC----SSCEEEEE-ECSS---SSCCEEEEETTSCEEEECTTS-
T ss_pred ceEE-EeecccceeEEECCCCcEeEEEe--------cc----ceeEEEEE-EcCC---CCCEEEEEeCCCEEEEEECCC-
Confidence 7766 57779999999999999988887 66 44688887 9998 332899999999999999997
Q ss_pred CCceEeeecCCcceEEEEEeC-CCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 242 GIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
++++.. .+|.+.|++|+|+| ++.+|+|+|.||.|++|++....+..
T Consensus 302 ~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 302 SEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp CEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred CcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 666654 47999999999998 78999999999999999998765443
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-36 Score=250.28 Aligned_cols=273 Identities=14% Similarity=0.220 Sum_probs=211.3
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
..+..++|++|.+.|++++|+|++++|+||+.||+|+|||..+++....+..|.. .|.+++|+| ++..|++++.|+
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~--~v~~~~~sp--~g~~lasg~~d~ 128 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCT--WVMACAYAP--SGCAIACGGLDN 128 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS--CCCEEEECT--TSSEEEEESTTS
T ss_pred ccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCC--CEEEEEECC--CCCEEEEeeCCC
Confidence 3467889999999999999999999999999999999999999999988888874 499999999 999999999999
Q ss_pred eEEEEeCCCCCCCC----CCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc
Q 021291 87 TVKCWDIENGGLSS----NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA 158 (314)
Q Consensus 87 ~v~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 158 (314)
.+++|++....... ...+..+......+.+.+... ........+...+|++....... .+.+|.. ++++|
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~-~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQ-SFHGHGADVLCLDLAP 206 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECC
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEE-EEcCCCCCeEEEEEEe
Confidence 99999987543211 112233333444444444332 22334445677888887776443 3455655 66777
Q ss_pred CCC-ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 159 EGP-KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 159 ~~~-~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
+.. ..++ +|+.|+.|++||+++++++..+. +| ...+.++. |+|+ +. +|++|+.|++|++||
T Consensus 207 ~~~g~~l~-sgs~Dg~v~~wd~~~~~~~~~~~--------~h----~~~v~~v~-~~p~---~~-~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 207 SETGNTFV-SGGCDKKAMVWDMRSGQCVQAFE--------TH----ESDVNSVR-YYPS---GD-AFASGSDDATCRLYD 268 (354)
T ss_dssp CSSCCEEE-EEETTSCEEEEETTTCCEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEE
T ss_pred CCCCCEEE-EEeCCCeEEEEECCCCcEEEEec--------CC----CCCeEEEE-EeCC---CC-EEEEEeCCCeEEEEE
Confidence 532 3343 67789999999999999988887 66 44788887 9998 44 899999999999999
Q ss_pred ccCCCCceEeeecC--CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe-------eeeeeecCCCceece
Q 021291 238 IRNPGIPLTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF-------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 238 ~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-------~~~~~~~~~~~~~~~ 304 (314)
++. ...+..+..+ ...+.+++|+|++.+|++|+.|+.|++||+.+++.+.. +..++++|+|..+++
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 269 LRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp TTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred CCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEE
Confidence 997 6666555533 34789999999999999999999999999998887664 344567888877765
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-37 Score=249.06 Aligned_cols=257 Identities=16% Similarity=0.161 Sum_probs=190.4
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC--CeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ--HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+ .+.+..+.+|... |.+++|++..++++|++|+.|++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~--V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSC--EEEEEECCGGGCSEEEEEETTTEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCC--eEEEEecCCCcCCEEEEEcCCCEE
Confidence 457889999999999999999999999999999999874 3677889999855 999999862237899999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeee-ccccccccCCCCcceeeccCCce-eeecCCCCCC----ceeccCC--
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPAEG-- 160 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~-- 160 (314)
++||+++++......+..+........+++.. ..........+...+|++..... ....+.+|.. ++|+|++
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 99999987533211222233444445555432 22333445556677888766532 1233445655 7888873
Q ss_pred ----------CceEEEeecCcCeEEEEecCCCc----eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 161 ----------PKYMAVAGEQLSEVEIWDLNTAE----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 161 ----------~~~~~~~g~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
..+++ +|+.|++|++||+++++ ....+. +| ...+.+++ |+|++..+. +|++
T Consensus 160 ~~~~~~~~~~~~~l~-sgs~D~~v~lwd~~~~~~~~~~~~~l~--------~H----~~~V~~v~-~sp~~~~~~-~las 224 (297)
T 2pm7_B 160 EDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS-YMAS 224 (297)
T ss_dssp ----------CCEEE-EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-EEEE
T ss_pred ccccCCCCCCcceEE-EEcCCCcEEEEEEcCCCceEEEEEEec--------CC----CCceEEEE-ECCCCCCce-EEEE
Confidence 23444 67789999999998765 444555 66 45788898 999842234 8999
Q ss_pred eecCCcEEEEEccCCCCc--eEee--ecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 227 GYEDGSILVWDIRNPGIP--LTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 227 g~~dg~i~vwd~~~~~~~--~~~~--~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
++.|++|++||++..... ...+ ..|...|.+++|+|++++|++++.||.|++|+....
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 999999999999863221 2233 467889999999999999999999999999998744
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-36 Score=245.59 Aligned_cols=270 Identities=20% Similarity=0.283 Sum_probs=209.6
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
..+..++.+|.+.|++++|+|++++|++|+.||.|++|++.+++....+.+|... |.+++|+| ++++|++++.|+.
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~d~~ 88 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSS--DSNLLVSASDDKT 88 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCc--eEEEEEcC--CCCEEEEECCCCE
Confidence 3567889999999999999999999999999999999999999999999999854 99999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCce
Q 021291 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (314)
|++||+++++... .+..+......+.+++... ........+...+|++....... .+..|.. ++|+|+++.+
T Consensus 89 i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 89 LKIWDVSSGKCLK--TLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK-TLPAHSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp EEEEETTTCCEEE--EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEE-EecCCCCcEEEEEEcCCCCEE
Confidence 9999999886543 2333333444444444322 22334455677888887766443 3444544 8899998754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+ +++.|+.|++||+++++.+..+.. .+ ...+..+. |+|+ ++ +|++++.|+.|++||+++ ++
T Consensus 165 ~--~~~~d~~i~~wd~~~~~~~~~~~~-------~~----~~~~~~~~-~~~~---~~-~l~~~~~d~~i~iwd~~~-~~ 225 (312)
T 4ery_A 165 V--SSSYDGLCRIWDTASGQCLKTLID-------DD----NPPVSFVK-FSPN---GK-YILAATLDNTLKLWDYSK-GK 225 (312)
T ss_dssp E--EEETTSCEEEEETTTCCEEEEECC-------SS----CCCEEEEE-ECTT---SS-EEEEEETTTEEEEEETTT-TE
T ss_pred E--EEeCCCcEEEEECCCCceeeEEec-------cC----CCceEEEE-ECCC---CC-EEEEEcCCCeEEEEECCC-Cc
Confidence 3 577799999999999988777652 22 34566776 9998 55 899999999999999998 88
Q ss_pred ceEeeecCCcceEE--EEE-eCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCceece
Q 021291 244 PLTAMKVHLEPVLC--LSI-DESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGNKFGT 304 (314)
Q Consensus 244 ~~~~~~~h~~~v~~--~~~-~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~ 304 (314)
++..+.+|...+.. ..+ .+++.+|++|+.||.|++||+++++.+... ...+++|++..+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 88888888765433 233 467889999999999999999999877654 34567777776654
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-36 Score=247.98 Aligned_cols=232 Identities=15% Similarity=0.224 Sum_probs=185.9
Q ss_pred CceEEecCCCCceeEEEEccCC-CEEEEecCCCeEEEEeCCC-----CeEEEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
.+..+|+||.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|... |.+++|+| ++++|+++
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~--v~~~~~s~--dg~~l~s~ 83 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI--VQDCTLTA--DGAYALSA 83 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSC--EEEEEECT--TSSEEEEE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCccc--EEEEEECC--CCCEEEEE
Confidence 5677899999999999999954 8999999999999999863 3456788899855 99999999 99999999
Q ss_pred ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCc
Q 021291 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (314)
Q Consensus 83 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
+.|++|++||+++++... .+..+...... ++|+|++..
T Consensus 84 s~D~~v~~wd~~~~~~~~----~~~~h~~~v~~--------------------------------------~~~~~~~~~ 121 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQ----RFVGHKSDVMS--------------------------------------VDIDKKASM 121 (319)
T ss_dssp ETTSEEEEEETTTTEEEE----EEECCSSCEEE--------------------------------------EEECTTSCE
T ss_pred eCCCEEEEEECCCCCeeE----EEccCCCcEEE--------------------------------------EEEcCCCCE
Confidence 999999999999886432 22222111110 568888864
Q ss_pred eEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCC---CCceEEEEeecCCcEEEEEcc
Q 021291 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS---QGFVNVLAGYEDGSILVWDIR 239 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~---~g~~~l~~g~~dg~i~vwd~~ 239 (314)
++ +|+.|++|++||++ ++.+..+. +| ...+.++. |.|... ++. .+++++.|+.|++||++
T Consensus 122 l~--s~s~D~~i~vwd~~-~~~~~~~~--------~h----~~~v~~~~-~~~~~~~~~~~~-~l~s~~~d~~i~~wd~~ 184 (319)
T 3frx_A 122 II--SGSRDKTIKVWTIK-GQCLATLL--------GH----NDWVSQVR-VVPNEKADDDSV-TIISAGNDKMVKAWNLN 184 (319)
T ss_dssp EE--EEETTSCEEEEETT-SCEEEEEC--------CC----SSCEEEEE-ECCC------CC-EEEEEETTSCEEEEETT
T ss_pred EE--EEeCCCeEEEEECC-CCeEEEEe--------cc----CCcEEEEE-EccCCCCCCCcc-EEEEEeCCCEEEEEECC
Confidence 43 67789999999997 45566666 56 44677777 888532 233 79999999999999999
Q ss_pred CCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe------eeeeeecCCCceece
Q 021291 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~~~~~ 304 (314)
+ .+....+.+|...|++++|+|++++|++++.||.|++||+.+++.+.. +..++++|++..++.
T Consensus 185 ~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 185 Q-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp T-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEE
T ss_pred c-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEE
Confidence 8 778888999999999999999999999999999999999999987765 345667788876654
No 14
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.4e-37 Score=249.03 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=184.7
Q ss_pred EEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEE
Q 021291 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (314)
Q Consensus 12 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 89 (314)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++ .+..+.+|... |.+++|++..++++|++|+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~--V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGP--VWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSC--EEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCcc--EEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3567999999999999999999999999999999998775 46778889855 9999998622478999999999999
Q ss_pred EEeCCCCCCCCCCeeee--ecceeeEEEeeeee-ccccccccCCCCcceeeccCCce--eeecCCCCCC----ceeccCC
Q 021291 90 CWDIENGGLSSNPSLTI--KTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET--VDTDSLCDSK----DDVPAEG 160 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~ 160 (314)
+||+++++... ...+ +........+++.. ..........+...+|++..... ....+.+|.. ++|+|+.
T Consensus 85 iWd~~~~~~~~--~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 85 IWREENGTWEK--SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EECCSSSCCCE--EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEECCCCcceE--EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 99998865322 2233 33344445555432 22333445556777888776532 2344556655 7888873
Q ss_pred C----------------ceEEEeecCcCeEEEEecCCC---ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCC-C
Q 021291 161 P----------------KYMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ-G 220 (314)
Q Consensus 161 ~----------------~~~~~~g~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~-g 220 (314)
. .+++ +|+.|++|++||++.. +....+. +| ...+.+++ |+|++.. +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~l~--------~h----~~~V~~v~-~sp~~~~~~ 228 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFA-SGGCDNLIKLWKEEEDGQWKEEQKLE--------AH----SDWVRDVA-WAPSIGLPT 228 (316)
T ss_dssp CC------CCSCCCCCCCBEE-CCBTTSBCCEEEECTTSCEEEEECCB--------CC----SSCEEEEE-CCCCSSCSC
T ss_pred CCccccccccccCccccceEE-EecCCCeEEEEEeCCCCccceeeecc--------cC----CCceEEEE-ecCCCCCCC
Confidence 1 2343 7888999999999755 3445555 66 44788887 9998411 2
Q ss_pred ceEEEEeecCCcEEEEEccCCC---CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 221 FVNVLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
. +|++|+.|++|++||++... .....+..|...|++++|+|++.+|++++.||.|++|+.....
T Consensus 229 ~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g 295 (316)
T 3bg1_A 229 S-TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295 (316)
T ss_dssp C-EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTS
T ss_pred c-eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCC
Confidence 3 89999999999999987521 1234567899999999999999999999999999999987543
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-36 Score=245.87 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=196.3
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
++.++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++++..+.+|... |.+++|+| ++.+|++|+.|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--IRSIAVHP--TKPYVLSGSDDLT 120 (304)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTSC
T ss_pred CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCc--EEEEEEcC--CCCEEEEECCCCe
Confidence 4678889999999999999999999999999999999999999999999999855 99999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCce
Q 021291 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (314)
|++||++++.... ..+..+........+++............+...+|++...........++.. ++|+|..+..
T Consensus 121 v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 121 VKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp EEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred EEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence 9999998763211 0222233344444444433333445555677888888766544433344433 6777643322
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
++++|+.|++|++||+++++++..+. +| ...+.++. |+|+ +. +|++|+.||.|++||+++ ++
T Consensus 200 ~l~s~s~D~~i~iWd~~~~~~~~~~~--------~h----~~~v~~~~-~~p~---~~-~l~s~s~Dg~i~iWd~~~-~~ 261 (304)
T 2ynn_A 200 YMITASDDLTIKIWDYQTKSCVATLE--------GH----MSNVSFAV-FHPT---LP-IIISGSEDGTLKIWNSST-YK 261 (304)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE--------CC----SSCEEEEE-ECSS---SS-EEEEEETTSCEEEEETTT-CC
T ss_pred EEEEEcCCCeEEEEeCCCCccceeeC--------CC----CCCEEEEE-ECCC---CC-EEEEEcCCCeEEEEECCC-Cc
Confidence 33467789999999999999999988 77 34677887 9998 44 899999999999999998 88
Q ss_pred ceEeeecCCcceEEEEEeCCCC--eEEEecCCCcEEEEecCCC
Q 021291 244 PLTAMKVHLEPVLCLSIDESCN--GGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~dg~i~iw~~~~~ 284 (314)
++..+..|...+++++|+|++. ++++|+.|| +.+|++...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 262 VEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC--
T ss_pred eeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEeccC
Confidence 9999999999999999988875 477776555 888887653
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-35 Score=242.97 Aligned_cols=269 Identities=15% Similarity=0.206 Sum_probs=206.4
Q ss_pred CceEEecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCCC-----eEEEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 9 DPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQH-----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
++..+|+||.+.|++|+|+|+ +++|+||+.||+|+|||+.+. .+...+.+|... |.+++|+| ++++|+++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~--V~~~~~s~--dg~~l~s~ 104 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF--VSDVVISS--DGQFALSG 104 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC--EEEEEECT--TSSEEEEE
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC--EEEEEECC--CCCEEEEE
Confidence 345689999999999999997 689999999999999998764 356778888854 99999999 99999999
Q ss_pred ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc
Q 021291 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA 158 (314)
Q Consensus 83 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 158 (314)
+.|+.|++|+........ .............+.... .........+...+|+............+|.. ++|++
T Consensus 105 ~~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTR--RFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp ETTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred cccccceEEeecccceee--eecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 999999999998775422 112222222222222221 12223334456677777776666666777766 78888
Q ss_pred CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEc
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (314)
++...++++++.|+.|++||+++++.+..+. +| ...+.+++ |+|+ ++ +|++|+.||.|++||+
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~--------~h----~~~v~~~~-~s~~---~~-~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHI--------GH----TGYLNTVT-VSPD---GS-LCASGGKDGQAMLWDL 244 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTCEEEEEET
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCceeeEec--------CC----CCcEEEEE-ECCC---CC-EEEEEeCCCeEEEEEe
Confidence 8777666678889999999999999988887 66 44788887 9998 55 8999999999999999
Q ss_pred cCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe----------------eeeeeecCCCcee
Q 021291 239 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF----------------GIGFVCDQEGNKF 302 (314)
Q Consensus 239 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~----------------~~~~~~~~~~~~~ 302 (314)
++ .+++..+.. ...|.++.|+|++. +++++.|+.|++||++.+..+.. +..++++|+|..+
T Consensus 245 ~~-~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 321 (340)
T 4aow_A 245 NE-GKHLYTLDG-GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL 321 (340)
T ss_dssp TT-TEEEEEEEC-SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred cc-CceeeeecC-CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence 98 777777775 56899999999886 55677899999999998866543 3445677888766
Q ss_pred ce
Q 021291 303 GT 304 (314)
Q Consensus 303 ~~ 304 (314)
++
T Consensus 322 ~s 323 (340)
T 4aow_A 322 FA 323 (340)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.4e-36 Score=248.68 Aligned_cols=268 Identities=14% Similarity=0.148 Sum_probs=192.4
Q ss_pred ecCCCCceeEEEEccCCCEEEEecC------CCeEEEEeCCCCeEE----EEEeccCCcccEEEEEEcccCCCCeEEEee
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTT------GGELRIWDTVQHRTV----SSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
..+|...|++++|+|||++||+|+. |+.|++|+..++... .....|. ..|.+++|+| ++ .+++++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~--~~V~~~~~s~--d~-~~l~~s 112 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE--AGVTDVAWVS--EK-GILVAS 112 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS--SCEEEEEEET--TT-EEEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC--CCEEEEEEcC--CC-CEEEEE
Confidence 3579999999999999999999997 788999998776532 2334566 4599999999 74 567788
Q ss_pred cCCeEEEEeCCCCCCCCCCeeeee--cceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
.||+|+|||+.+++......+... ........+++.... .......+...+|++....... .+.+|.. ++|+
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~~~~-~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKAVLK-SYNAHSSEVNCVAAC 190 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEEC
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEE-EEcCCCCCEEEEEEc
Confidence 899999999998875442222222 233444444443322 2334455667888887765443 4556665 8899
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
++++.+++ +++.|+.|++||+++++....+... . ....+.++. |+|++ +. +|++|+.|+.|++||
T Consensus 191 ~~~~~~~~-s~~~dg~v~~wd~~~~~~~~~~~~~------~----~~~~v~~v~-~sp~~--~~-~la~g~~d~~i~~wd 255 (357)
T 4g56_B 191 PGKDTIFL-SCGEDGRILLWDTRKPKPATRIDFC------A----SDTIPTSVT-WHPEK--DD-TFACGDETGNVSLVN 255 (357)
T ss_dssp TTCSSCEE-EEETTSCEEECCTTSSSCBCBCCCT------T----CCSCEEEEE-ECTTS--TT-EEEEEESSSCEEEEE
T ss_pred cCCCceee-eeccCCceEEEECCCCceeeeeeec------c----ccccccchh-hhhcc--cc-eEEEeecccceeEEE
Confidence 99887766 5666999999999998877655421 1 245678887 99973 33 899999999999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCC-CeEEEecCCCcEEEEecCCCeeeEe------eeeeeecC-CCceece
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTYVLF------GIGFVCDQ-EGNKFGT 304 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~iw~~~~~~~~~~------~~~~~~~~-~~~~~~~ 304 (314)
+++ ++++..+.+|...|++++|+|++ ++|++|+.|+.|+|||+++++.+.. +..++++| ++..|++
T Consensus 256 ~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 256 IKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp SSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred CCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEE
Confidence 998 88899999999999999999987 5789999999999999999887654 34556776 5666654
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.8e-36 Score=244.20 Aligned_cols=244 Identities=15% Similarity=0.230 Sum_probs=189.1
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
.+++.+++|...|.+++|+|++++|++|+.|++|+|||+.+++.+..+.+|... |.+++|+| ++.+|++++.|++|
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~s~D~~i 131 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD--VMSVDIDK--KASMIISGSRDKTI 131 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECT--TSCEEEEEETTSCE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc--EEEEEEcC--CCCEEEEEeCCCeE
Confidence 467889999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeec--ceeeEEEeeeeec-----cccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 89 KCWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKE-----PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
++||++... ...+.. .......+.+... .........+...+|++...... ..+.+|.. ++|+
T Consensus 132 ~vwd~~~~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 132 KVWTIKGQC-----LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTAS 205 (319)
T ss_dssp EEEETTSCE-----EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE-EEECCCCSCEEEEEEC
T ss_pred EEEECCCCe-----EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh-eeecCCCCcEEEEEEc
Confidence 999997532 222222 2223333332211 12334445567788888765433 34556666 8999
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
|+++.++ +|+.|+.|++||+++++.+..+. . ...+.+++ |+|+ +. +++++.. +.+++|+
T Consensus 206 p~g~~l~--s~~~dg~i~iwd~~~~~~~~~~~--------~-----~~~v~~~~-~sp~---~~-~la~~~~-~~i~v~~ 264 (319)
T 3frx_A 206 PDGTLIA--SAGKDGEIMLWNLAAKKAMYTLS--------A-----QDEVFSLA-FSPN---RY-WLAAATA-TGIKVFS 264 (319)
T ss_dssp TTSSEEE--EEETTCEEEEEETTTTEEEEEEE--------C-----CSCEEEEE-ECSS---SS-EEEEEET-TEEEEEE
T ss_pred CCCCEEE--EEeCCCeEEEEECCCCcEEEEec--------C-----CCcEEEEE-EcCC---CC-EEEEEcC-CCcEEEE
Confidence 9997543 67779999999999999888877 2 23578887 9998 54 7777764 5699999
Q ss_pred ccCCCCceEeee--------cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 238 IRNPGIPLTAMK--------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 238 ~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
++. ...+..+. .|...+.+++|+|+|++|++|+.||.|++||+.++
T Consensus 265 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 265 LDP-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ETT-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eCc-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 986 54444443 35668999999999999999999999999998764
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-35 Score=239.30 Aligned_cols=252 Identities=16% Similarity=0.297 Sum_probs=199.4
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++....+.+|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|... |.+++|+| ++++|++++.|+
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~s~~~d~ 129 (312)
T 4ery_A 54 DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY--VFCCNFNP--QSNLIVSGSFDE 129 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTS
T ss_pred CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcC--CCCEEEEEeCCC
Confidence 35678889999999999999999999999999999999999999999999999854 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCc
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (314)
+|++||+++++... .+..+........+++... ........+...+|++............+.. ++|+|+++.
T Consensus 130 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (312)
T 4ery_A 130 SVRIWDVKTGKCLK--TLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 206 (312)
T ss_dssp CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE
T ss_pred cEEEEECCCCEEEE--EecCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE
Confidence 99999999886533 2222333334444443322 2233444567788888877766555444443 889999976
Q ss_pred eEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
++ +++.|+.|++||+++++.+..+. +|..... ..... +++. ++. +|++|+.||.|++||+++ +
T Consensus 207 l~--~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~--~~~~~-~~~~--~~~-~l~sg~~dg~i~vwd~~~-~ 269 (312)
T 4ery_A 207 IL--AATLDNTLKLWDYSKGKCLKTYT--------GHKNEKY--CIFAN-FSVT--GGK-WIVSGSEDNLVYIWNLQT-K 269 (312)
T ss_dssp EE--EEETTTEEEEEETTTTEEEEEEC--------SSCCSSS--CCCEE-EECS--SSC-EEEECCTTSCEEEEETTT-C
T ss_pred EE--EEcCCCeEEEEECCCCcEEEEEE--------ecCCceE--EEEEE-EEeC--CCc-EEEEECCCCEEEEEECCC-c
Confidence 54 56678999999999999888887 5644322 22222 5543 144 899999999999999998 8
Q ss_pred CceEeeecCCcceEEEEEeCCCCeEEEec--CCCcEEEEecC
Q 021291 243 IPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLD 282 (314)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~i~iw~~~ 282 (314)
+.+..+.+|...|.+++|+|++.+|++++ .|+.|++|+.+
T Consensus 270 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 270 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88999999999999999999999999986 69999999975
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-35 Score=241.96 Aligned_cols=247 Identities=16% Similarity=0.200 Sum_probs=195.5
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
.++.+..+..|...|.+++|+|++++|++|+.|+.|++|++.++ +....+.+|... |.++.|++ + ..++++
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~-~~l~s~ 160 (340)
T 1got_B 86 TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY--LSCCRFLD--D-NQIVTS 160 (340)
T ss_dssp TCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC--EEEEEEEE--T-TEEEEE
T ss_pred CCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc--EEEEEECC--C-CcEEEE
Confidence 34677888999999999999999999999999999999999865 456677888854 99999998 6 569999
Q ss_pred ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc
Q 021291 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA 158 (314)
Q Consensus 83 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 158 (314)
+.|++|++||+++++... .+..+........+++... ........+...+|+++...... .+.+|.. ++|+|
T Consensus 161 s~d~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 161 SGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQ-TFTGHESDINAICFFP 236 (340)
T ss_dssp ETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEE-EECCCSSCEEEEEECT
T ss_pred ECCCcEEEEECCCCcEEE--EEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEE-EEcCCcCCEEEEEEcC
Confidence 999999999999886533 2222333344444443322 23344456778888887765443 4455655 89999
Q ss_pred CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEc
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (314)
+++.++ +|+.|++|++||+++++.+..+.. .. ....+.++. |+|+ |+ +|++|+.|+.|++||+
T Consensus 237 ~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~---------~~-~~~~v~~~~-~s~~---g~-~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 237 NGNAFA--TGSDDATCRLFDLRADQELMTYSH---------DN-IICGITSVS-FSKS---GR-LLLAGYDDFNCNVWDA 299 (340)
T ss_dssp TSSEEE--EEETTSCEEEEETTTTEEEEEECC---------TT-CCSCEEEEE-ECTT---SS-EEEEEETTSEEEEEET
T ss_pred CCCEEE--EEcCCCcEEEEECCCCcEEEEEcc---------CC-cccceEEEE-ECCC---CC-EEEEECCCCeEEEEEc
Confidence 987544 677799999999999887776652 11 233578887 9998 55 9999999999999999
Q ss_pred cCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 239 RNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 239 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
.+ +..+..+.+|..+|++++|+|++.+|+||+.||.|++||
T Consensus 300 ~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 300 LK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 98 788899999999999999999999999999999999997
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.9e-37 Score=256.06 Aligned_cols=262 Identities=13% Similarity=0.203 Sum_probs=198.8
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe-------EEEEEeccCCcccEEEEEEcccCCCCeE
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-------TVSSSWVHSAAHGIVSVATGPSIGLNKV 79 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l 79 (314)
.++.+..+++|...|.+++|+|++++|++|+.|+.|++||+.+.. ....+.+|... |.++.|.|. ++..|
T Consensus 97 ~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~--v~~~~~~~~-~~~~l 173 (380)
T 3iz6_a 97 TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGY--ASSCQYVPD-QETRL 173 (380)
T ss_dssp TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSC--CCCCBCCSS-SSSCE
T ss_pred CCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcc--eEEEEEecC-CCCEE
Confidence 346778899999999999999999999999999999999986532 33456778744 999999993 24579
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCee-----eeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC-
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSL-----TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK- 153 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (314)
++|+.|++|++||+++++... .+ ..+........+..............+...+|+++........+.+|..
T Consensus 174 ~s~s~D~~i~~wd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~ 251 (380)
T 3iz6_a 174 ITGSGDQTCVLWDVTTGQRIS--IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD 251 (380)
T ss_dssp EEECTTSCEEEECTTTCCEEE--EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC
T ss_pred EEECCCCcEEEEEcCCCcEEE--EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC
Confidence 999999999999999886532 11 1112222223332222233444555677888998765555556667766
Q ss_pred ---ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 ---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
++|+|+++.++ +|+.|++|++||+++++.+..+.... .........+.+++ |+|+ |+ +|++|+.|
T Consensus 252 v~~v~~~p~~~~l~--s~s~D~~i~lwd~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~-~s~~---g~-~l~~g~~d 319 (380)
T 3iz6_a 252 INSVKFFPDGQRFG--TGSDDGTCRLFDMRTGHQLQVYNREP-----DRNDNELPIVTSVA-FSIS---GR-LLFAGYSN 319 (380)
T ss_dssp CCEEEECTTSSEEE--EECSSSCEEEEETTTTEEEEEECCCC-----SSSCCSSCSCSEEE-ECSS---SS-EEEEECTT
T ss_pred eEEEEEecCCCeEE--EEcCCCeEEEEECCCCcEEEEecccc-----cccccccCceEEEE-ECCC---CC-EEEEEECC
Confidence 89999997543 68889999999999999888776210 11111223477887 9998 55 99999999
Q ss_pred CcEEEEEccCCCCceEee----ecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 231 GSILVWDIRNPGIPLTAM----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
|.|++||+.. ++.+..+ .+|...|++++|+|++.+|+|||.||.|++|++...+.
T Consensus 320 g~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 320 GDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred CCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 9999999987 6666666 68999999999999999999999999999999987654
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=245.09 Aligned_cols=261 Identities=8% Similarity=0.073 Sum_probs=191.2
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC------------CeEEEEEeccCCcccEEEEEEcccCCCCeEEEee
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ------------HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
.|...|.+++|+|||++|++++ |+++++||... +..... ..+. ..|.+++|+| + +.|++|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~-~~~~--~~v~~~~~s~--d-~~l~~~s 100 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAG-VQTE--AGVADLTWVG--E-RGILVAS 100 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEE-EEES--SCEEEEEEET--T-TEEEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeee-eccC--CCEEEEEEeC--C-CeEEEEE
Confidence 5778899999999999999887 67788887321 011111 1233 4599999999 7 6789999
Q ss_pred cCCeEEEEeCCCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
.||+|+|||+++++......... +........+++.+. ........+...+|++..+... ..+.+|.. ++|+
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVVL-SSYRAHAAQVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEEC
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEE-EEEcCcCCceEEEEec
Confidence 99999999999987654212222 223344444444332 2233445567888888876544 45667776 8899
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
+++..+++ +++.|++|++||+++++....+... .| ...+.++. |+|++ ++ +|++|+.||.|++||
T Consensus 179 ~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~------~~----~~~~~~~~-~~p~~--~~-~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 179 PHKDSVFL-SCSEDNRILLWDTRCPKPASQIGCS------AP----GYLPTSLA-WHPQQ--SE-VFVFGDENGTVSLVD 243 (344)
T ss_dssp SSCTTEEE-EEETTSCEEEEETTSSSCEEECC--------------CCCEEEEE-ECSSC--TT-EEEEEETTSEEEEEE
T ss_pred CCCCCcee-eeccccccccccccccceeeeeecc------ee----eccceeee-ecCCC--Cc-ceEEeccCCcEEEEE
Confidence 99987766 6777999999999999988776521 11 33567787 99973 33 899999999999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCC-CeEEEecCCCcEEEEecCCCeeeEe------eeeeeecCCCce
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTYVLF------GIGFVCDQEGNK 301 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~~ 301 (314)
+++ ++++..+.+|...|++++|+|++ ++|++|+.|+.|+|||+++++.... +..++++|++..
T Consensus 244 ~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 244 TKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp SCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTT
T ss_pred CCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCe
Confidence 998 88999999999999999999998 5799999999999999999876543 344567777753
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-35 Score=261.87 Aligned_cols=248 Identities=15% Similarity=0.136 Sum_probs=192.2
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCC
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 95 (314)
.+.+.+.+++|+|||++|++++ ++.|++|++.+++....+.+|... |.+++|+| ++++|++|+.|++|+|||+.+
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~--v~~~~~sp--dg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQ--TTVAKTSP--SGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSC--EEEEEECT--TSSEEEEEETTSEEEEEESSS
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCc--eEEEEECC--CCcEEEEEeCCCCEEEeECCC
Confidence 3577889999999999999987 569999999988899999999955 99999999 999999999999999999976
Q ss_pred CCCCCCCeeeeecceeeEEEeeeeeccccccccCCC-CcceeeccCCceeeecCCCCCC----ceeccCCCceEEEeecC
Q 021291 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE-PKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 170 (314)
++......+..+........|++.+........... ...++..+.+ .....+.+|.. ++|+|+++..++ +|+.
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~-s~s~ 168 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRII-SGSD 168 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEE-EEET
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEE-EEeC
Confidence 543221122223344455555554433322222111 1223333322 23345677776 899999876555 6777
Q ss_pred cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee-
Q 021291 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK- 249 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~- 249 (314)
|++|++||.++++....+. +| ...+.+++ |+|+ |+ +|++|+.|++|++||+.+ ++++..+.
T Consensus 169 D~~v~lwd~~~~~~~~~l~--------~H----~~~V~~v~-fspd---g~-~las~s~D~~i~lwd~~~-g~~~~~~~~ 230 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFG--------EH----TKFVHSVR-YNPD---GS-LFASTGGDGTIVLYNGVD-GTKTGVFED 230 (611)
T ss_dssp TSCEEEEETTTBEEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT-CCEEEECBC
T ss_pred CCeEEEEECCCCeEeeeec--------cc----cCceEEEE-ECCC---CC-EEEEEECCCcEEEEECCC-CcEeeeecc
Confidence 9999999999988888887 67 44788888 9998 55 899999999999999987 77777774
Q ss_pred ------cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 250 ------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 250 ------~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+|...|.+++|+|++++|++++.|+.|++||+++++.+.
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee
Confidence 799999999999999999999999999999999887553
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-35 Score=248.11 Aligned_cols=237 Identities=22% Similarity=0.364 Sum_probs=184.0
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCC
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 99 (314)
.|++++|+|+|++|++|+.||.|+|||+.+++.+..+.+|... |.+++|+| ++++|++++.|++|++||++++++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD--IYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCC--EEEEEEcC--CCCEEEEecCCCcEEEEECCCCeeE
Confidence 4999999999999999999999999999999999999999855 99999999 9999999999999999999988653
Q ss_pred CCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec------CCCCCC----ceeccCCCceEEEee
Q 021291 100 SNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD------SLCDSK----DDVPAEGPKYMAVAG 168 (314)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~g 168 (314)
. .+.. .......+++............+...+|++......... ..+|.. ++|+|+++.++ +|
T Consensus 201 ~----~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~--s~ 274 (393)
T 1erj_A 201 L----TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV--SG 274 (393)
T ss_dssp E----EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE--EE
T ss_pred E----EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE--EE
Confidence 2 2222 223333333322223334455667788888776544322 245655 89999997544 67
Q ss_pred cCcCeEEEEecCCCce------------eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 169 EQLSEVEIWDLNTAER------------CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~------------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
+.|+.|++||+++... ...+. +| ...+.++. |+|+ +. +|++|+.|+.|++|
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~~~~---~~-~l~sgs~D~~v~iw 337 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI--------GH----KDFVLSVA-TTQN---DE-YILSGSKDRGVLFW 337 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEE--------CC----SSCEEEEE-ECGG---GC-EEEEEETTSEEEEE
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEe--------cc----cCcEEEEE-ECCC---CC-EEEEEeCCCeEEEE
Confidence 7899999999986432 33333 55 44688887 9998 44 89999999999999
Q ss_pred EccCCCCceEeeecCCcceEEEEEeC------CCCeEEEecCCCcEEEEecCCC
Q 021291 237 DIRNPGIPLTAMKVHLEPVLCLSIDE------SCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~------~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
|.++ ++++..+.+|...|.+++|++ ++.+|+||+.||.|++|+++..
T Consensus 338 d~~~-~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 338 DKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ETTT-CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred ECCC-CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9998 888999999999999999965 6889999999999999998643
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.6e-36 Score=246.33 Aligned_cols=249 Identities=16% Similarity=0.200 Sum_probs=181.9
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
.+...+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+.+|... |.+++|+| ++++|++++.|++|
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~--v~~v~~sp--~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE--VYSVAFSP--DNRQILSAGAEREI 142 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSC--EEEEEECS--STTEEEEEETTSCE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc--EEEEEECC--CCCEEEEEcCCCEE
Confidence 457789999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeec---------cccccccCCCCcceeeccCCceeeecCCCCCC----ce
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE---------PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DD 155 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 155 (314)
++||+.............+........+++... .........+...+|+.. ......+.+|.. ++
T Consensus 143 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 143 KLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEE
T ss_pred EEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEE
Confidence 999997432110000001222333344443321 122233344556667632 233344556665 89
Q ss_pred eccCCCceEEEeecCcCeEEEEecCCC-ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEE
Q 021291 156 VPAEGPKYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~ 234 (314)
|+|+++.++ +|+.|+.|++||++.. .....+. + ...+.+++ |+|+ +. +++ ++.|+.|+
T Consensus 221 ~s~~g~~l~--sgs~dg~v~iwd~~~~~~~~~~~~---------~----~~~v~~v~-~sp~---~~-~la-~~~d~~v~ 279 (343)
T 2xzm_R 221 ISPNGKYIA--TGGKDKKLLIWDILNLTYPQREFD---------A----GSTINQIA-FNPK---LQ-WVA-VGTDQGVK 279 (343)
T ss_dssp ECTTSSEEE--EEETTCEEEEEESSCCSSCSEEEE---------C----SSCEEEEE-ECSS---SC-EEE-EEESSCEE
T ss_pred ECCCCCEEE--EEcCCCeEEEEECCCCcccceeec---------C----CCcEEEEE-ECCC---CC-EEE-EECCCCEE
Confidence 999997544 6777999999999543 3333333 1 23578887 9998 44 555 45688899
Q ss_pred EEEccCCCCceE--eee-----------cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 235 VWDIRNPGIPLT--AMK-----------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 235 vwd~~~~~~~~~--~~~-----------~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
+||+.+ .+... .+. +|...|++++|+|++++|++|+.||.|++|+++++.
T Consensus 280 iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 280 IFNLMT-QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEESSS-CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEeCC-CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 999986 43322 333 688899999999999999999999999999987653
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5e-35 Score=258.27 Aligned_cols=260 Identities=13% Similarity=0.141 Sum_probs=199.7
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC--eEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
.++.+..|.+|...|++++|+|+|++||+|+.||+|+|||+.++ .....+.+|.. .|.+++|+| +++.|++++.
T Consensus 48 ~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~--~v~~v~fs~--dg~~l~~~~~ 123 (611)
T 1nr0_A 48 SLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSG--PVKDISWDS--ESKRIAAVGE 123 (611)
T ss_dssp CSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSS--CEEEEEECT--TSCEEEEEEC
T ss_pred CcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCC--ceEEEEECC--CCCEEEEEEC
Confidence 34678899999999999999999999999999999999998754 34567788884 499999999 9999999886
Q ss_pred C----CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----cee
Q 021291 85 D----GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDV 156 (314)
Q Consensus 85 d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 156 (314)
+ +.|++||.. +... .+..+........|++................+|+....+. ...+.+|.. ++|
T Consensus 124 ~~~~~~~v~~wd~~--~~~~--~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~f 198 (611)
T 1nr0_A 124 GRERFGHVFLFDTG--TSNG--NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRY 198 (611)
T ss_dssp CSSCSEEEEETTTC--CBCB--CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEE
T ss_pred CCCceeEEEEeeCC--CCcc--eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEE
Confidence 5 478888853 3222 23444455556666655443345556667788888766543 345677876 899
Q ss_pred ccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 157 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 157 ~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
+|+++.++ +++.|++|++||+.+++.+..+... .....+| ...+.++. |+|+ |+ +|++++.|++|++|
T Consensus 199 spdg~~la--s~s~D~~i~lwd~~~g~~~~~~~~~-~~~~~~h----~~~V~~v~-~spd---g~-~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 199 NPDGSLFA--STGGDGTIVLYNGVDGTKTGVFEDD-SLKNVAH----SGSVFGLT-WSPD---GT-KIASASADKTIKIW 266 (611)
T ss_dssp CTTSSEEE--EEETTSCEEEEETTTCCEEEECBCT-TSSSCSS----SSCEEEEE-ECTT---SS-EEEEEETTSEEEEE
T ss_pred CCCCCEEE--EEECCCcEEEEECCCCcEeeeeccc-ccccccc----CCCEEEEE-ECCC---CC-EEEEEeCCCeEEEE
Confidence 99997443 6777999999999999887776310 0011134 55788998 9998 55 89999999999999
Q ss_pred EccCCCCce-------------------------------------------EeeecCCcceEEEEEeCCCCeEEEecCC
Q 021291 237 DIRNPGIPL-------------------------------------------TAMKVHLEPVLCLSIDESCNGGISGGAD 273 (314)
Q Consensus 237 d~~~~~~~~-------------------------------------------~~~~~h~~~v~~~~~~~~~~~l~s~s~d 273 (314)
|+++ ++++ ..+.+|...|++++|+|++++|++++.|
T Consensus 267 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 267 NVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp ETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9986 4332 3445899999999999999999999999
Q ss_pred CcEEEEecCCCeeeE
Q 021291 274 QKIVLYNLDHSTYVL 288 (314)
Q Consensus 274 g~i~iw~~~~~~~~~ 288 (314)
+.|++||+.+++...
T Consensus 346 ~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 346 GHINSWDISTGISNR 360 (611)
T ss_dssp SCEEEEETTTCCEEE
T ss_pred CcEEEEECCCCceee
Confidence 999999999887644
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-35 Score=241.62 Aligned_cols=249 Identities=16% Similarity=0.193 Sum_probs=195.7
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC------eEEEEEeccCCcccEEEEEEcccCCCCeEE
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH------RTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (314)
+.+..+.+..|...|.+++|+|++.+|++|+.|+.+++|++... .....+..|... |.+++|+| ++..|+
T Consensus 95 ~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~ 170 (354)
T 2pbi_B 95 TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNY--LSACSFTN--SDMQIL 170 (354)
T ss_dssp TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSC--EEEEEECS--SSSEEE
T ss_pred CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCc--EEEEEEeC--CCCEEE
Confidence 45677788899999999999999999999999999999998643 345566778844 99999999 889999
Q ss_pred EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeec-cccccccCCCCcceeeccCCceeeecCCCCCC----ce
Q 021291 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DD 155 (314)
Q Consensus 81 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 155 (314)
+++.|++|++||+++++... .+..+........+.+... .........+...+|+++...... .+.+|.. ++
T Consensus 171 t~s~D~~v~lwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 171 TASGDGTCALWDVESGQLLQ--SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ-AFETHESDVNSVR 247 (354)
T ss_dssp EEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEE
T ss_pred EEeCCCcEEEEeCCCCeEEE--EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE-EecCCCCCeEEEE
Confidence 99999999999999987543 2222333333333433322 234445556778889988776543 3456655 89
Q ss_pred eccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEE
Q 021291 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (314)
|+|+++.++ +|+.|++|++||++..+.+..+.. +. ....+.++. |+|+ |. +|++|+.|+.|++
T Consensus 248 ~~p~~~~l~--s~s~D~~v~lwd~~~~~~~~~~~~--------~~--~~~~~~~~~-~s~~---g~-~l~~g~~d~~i~v 310 (354)
T 2pbi_B 248 YYPSGDAFA--SGSDDATCRLYDLRADREVAIYSK--------ES--IIFGASSVD-FSLS---GR-LLFAGYNDYTINV 310 (354)
T ss_dssp ECTTSSEEE--EEETTSCEEEEETTTTEEEEEECC--------TT--CCSCEEEEE-ECTT---SS-EEEEEETTSCEEE
T ss_pred EeCCCCEEE--EEeCCCeEEEEECCCCcEEEEEcC--------CC--cccceeEEE-EeCC---CC-EEEEEECCCcEEE
Confidence 999987443 677799999999998887766652 21 123466777 9998 55 9999999999999
Q ss_pred EEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 236 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
||+.+ +..+..+.+|...|++++|+|++.+|++|+.||.|++|+
T Consensus 311 wd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 311 WDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99988 888889999999999999999999999999999999996
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=243.00 Aligned_cols=252 Identities=13% Similarity=0.154 Sum_probs=190.7
Q ss_pred CceEEecCCCC-ceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEE---EeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 9 DPVAVLRGHRA-SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS---SWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 9 ~~~~~l~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
++++++++|.+ .|.+++|+|+|++||+|+.|++|+|||+++++.... ..+|. ..|.+++|+| ++++|++++.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp--~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSP--CGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECT--TSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECC--CCCEEEEEEC
Confidence 57889999998 999999999999999999999999999988764422 24676 4599999999 9999999999
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc--eeeecCCCCCC----ceecc
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE--TVDTDSLCDSK----DDVPA 158 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~ 158 (314)
|++|++||+.++.......+..+........+++... ........+...+|++.... .....+.+|.. ++|+|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 9999999998764321012222333444455554332 22334445677888887654 23445566766 89999
Q ss_pred CCCceEEEeecCcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
+++.++ +++.|+.|++||.++++. ...+. +| ...+.+++ |+|+ |+ +|++|+.|++|++|
T Consensus 161 ~~~~l~--s~s~d~~i~~w~~~~~~~~~~~~~~--------~h----~~~v~~l~-~sp~---g~-~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 161 SQELLA--SASYDDTVKLYREEEDDWVCCATLE--------GH----ESTVWSLA-FDPS---GQ-RLASCSDDRTVRIW 221 (345)
T ss_dssp SSSCEE--EEETTSCEEEEEEETTEEEEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEE
T ss_pred CCCEEE--EEeCCCcEEEEEecCCCEEEEEEec--------CC----CCceEEEE-ECCC---CC-EEEEEeCCCeEEEe
Confidence 987544 677799999999987753 34555 66 45788898 9998 55 89999999999999
Q ss_pred EccCCCC--------------ceEeeec-CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 237 DIRNPGI--------------PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 237 d~~~~~~--------------~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
|...++. ++..+.+ |...|.+++|++++..|++++.|+.|++|+.+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 9754221 2334444 8889999999999999999999999999998765
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-34 Score=236.56 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=186.8
Q ss_pred CceEEecCCCCceeEEEE-----cc-CCCEEEEecCCCeEEEEeCCCC-------eEEEEEeccCCcccEEEEEEcccCC
Q 021291 9 DPVAVLRGHRASVTDVCF-----HQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIG 75 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~-----~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~ 75 (314)
++..+|+||.+.|++++| ++ ++++|++|+.|++|++||+.+. .....+.+|... |.+++|+| +
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~--V~~~~~~~--~ 87 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHF--VSDLALSQ--E 87 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSC--EEEEEECS--S
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCc--eEEEEECC--C
Confidence 567789999999999999 77 8999999999999999998643 456778889855 99999999 9
Q ss_pred CCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeee-cCCCCCC-
Q 021291 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLCDSK- 153 (314)
Q Consensus 76 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 153 (314)
+.+|++++.|++|++||+++++... .+..+........+++.... .......+...+|++........ ....|..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYK--RFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEE--EEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEE--EEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence 9999999999999999999886543 23334444455555544332 22334456778888764332221 2234544
Q ss_pred ---ceeccCCC---------ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCc
Q 021291 154 ---DDVPAEGP---------KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (314)
Q Consensus 154 ---~~~~~~~~---------~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~ 221 (314)
++|+|++. .+++ +++.|+.|++||. ..+....+. +| ...+.++. |+|+ |+
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~-~~~~~~~~~--------~h----~~~v~~~~-~s~~---g~ 226 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFA-SVGWDGRLKVWNT-NFQIRYTFK--------AH----ESNVNHLS-ISPN---GK 226 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEE-EEETTSEEEEEET-TTEEEEEEE--------CC----SSCEEEEE-ECTT---SS
T ss_pred eeeeeeccccccccccCCCCCEEE-EEcCCCEEEEEcC-CCceeEEEc--------Cc----cccceEEE-ECCC---CC
Confidence 78888763 2344 6777999999994 455666666 56 44788887 9998 55
Q ss_pred eEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 222 VNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
+|++|+.||.|++||++....+...+. +...|.+++|+|++.+|++ +.|+.|++|++.+++.
T Consensus 227 -~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 227 -YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSK 288 (343)
T ss_dssp -EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCS
T ss_pred -EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCC
Confidence 899999999999999965355555543 5667999999999987765 4688899999987654
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-34 Score=235.31 Aligned_cols=253 Identities=17% Similarity=0.149 Sum_probs=184.1
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC--eEEEEE-ec-cCCcccEEEEEEcccCCCCeEEEee
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSS-WV-HSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~-~~-~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
.+++++|++|.++|.+++|+|+ +|++|+.|++|++||+.++ +.+..+ .. |. ..|.+++|+| ++++|++++
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~las~s 77 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRP--HTSLLAAGS 77 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECT--TSSEEEEEE
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECC--CCCEEEEEe
Confidence 4678899999999999999987 9999999999999999875 455555 33 66 4599999999 999999999
Q ss_pred cCCeEEEEeCCCCCC---CCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCC-c--eeeecCCCCCC--
Q 021291 84 RDGTVKCWDIENGGL---SSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG-E--TVDTDSLCDSK-- 153 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-- 153 (314)
.|++|++||++.... ..+....+ +........+++... ........+...+|++... . .....+.+|..
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 999999999964321 01111222 233334444444322 2233444567788888432 1 34455667766
Q ss_pred --ceeccCCCceEEEeecCcCeEEEEecCCC--ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 154 --DDVPAEGPKYMAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 154 --~~~~~~~~~~~~~~g~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
++|+|++..++ +++.|++|++||.+++ +++..+. +| ...+.++. |+|+.. +. +|++|+.
T Consensus 157 ~~v~~~p~~~~l~--s~s~D~~i~iW~~~~~~~~~~~~~~--------~h----~~~v~~~~-~~~~~~-~~-~l~s~s~ 219 (330)
T 2hes_X 157 KHVIWHPSEALLA--SSSYDDTVRIWKDYDDDWECVAVLN--------GH----EGTVWSSD-FDKTEG-VF-RLCSGSD 219 (330)
T ss_dssp EEEEECSSSSEEE--EEETTSCEEEEEEETTEEEEEEEEC--------CC----SSCEEEEE-ECCSSS-SC-EEEEEET
T ss_pred EEEEECCCCCEEE--EEcCCCeEEEEECCCCCeeEEEEcc--------CC----CCcEEEEE-ecCCCC-ee-EEEEEeC
Confidence 89999987443 6777999999998866 5666666 67 45788887 999843 33 7999999
Q ss_pred CCcEEEEEccCCC-------CceEeeec-CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 230 DGSILVWDIRNPG-------IPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 230 dg~i~vwd~~~~~-------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
|++|++||++... .+...+.. |...|.+++|++++ +|++++.||.|++|+..+++
T Consensus 220 D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 220 DSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp TSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred CCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 9999999997521 23444544 89999999999766 79999999999999998774
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=238.36 Aligned_cols=253 Identities=15% Similarity=0.174 Sum_probs=183.4
Q ss_pred ecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC--eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEE
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 91 (314)
..+|.+.|.+++|+|++++|++|+.|++|+|||+.++ +++..+.+|... |.+++|+| ++++|++++.|++|++|
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~--v~~v~~sp--~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE--VKSVAWAP--SGNLLATCSRDKSVWVW 132 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSCEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC--ceEEEEeC--CCCEEEEEECCCeEEEE
Confidence 3689999999999999999999999999999998776 467788888854 99999999 99999999999999999
Q ss_pred eCCCCCCCC-CCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc-eeeecCCCCCC----ceeccCCCceEE
Q 021291 92 DIENGGLSS-NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE-TVDTDSLCDSK----DDVPAEGPKYMA 165 (314)
Q Consensus 92 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~ 165 (314)
|++++.... ...+..+........+++... ........+...+|+..... .....+.+|.. ++|+|+++.++
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~- 210 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLA- 210 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEE-
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEE-
Confidence 998764211 001122233344444444332 22333445667778877654 33456677776 89999997544
Q ss_pred EeecCcCeEEEEecCCCc---------------eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 166 VAGEQLSEVEIWDLNTAE---------------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~---------------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
+++.|++|++||..... ++..+. + .....+.+++ |+|+ +. .|++++.|
T Consensus 211 -s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~h~~~v~~v~-~~~~---~~-~l~s~~~d 273 (345)
T 3fm0_A 211 -SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS--------G---FHSRTIYDIA-WCQL---TG-ALATACGD 273 (345)
T ss_dssp -EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEEC--------S---SCSSCEEEEE-ECTT---TC-CEEEEETT
T ss_pred -EEeCCCeEEEeccccCCCCccceeeccCCccceeEEec--------C---CCCCcEEEEE-EecC---CC-EEEEEeCC
Confidence 67779999999974322 122222 2 1245788887 9998 44 79999999
Q ss_pred CcEEEEEccCCC---Cce-----EeeecCCcceEEEEEeCCC-CeEEEecCCCcEEEEecCCCeeeEe
Q 021291 231 GSILVWDIRNPG---IPL-----TAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 231 g~i~vwd~~~~~---~~~-----~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
+.|++|+.+... .+. ....+|...|++++|+|++ .+|+|||.||.|++|++.+++.+..
T Consensus 274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 999999987522 111 2235899999999999987 4899999999999999998876543
No 32
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=234.16 Aligned_cols=265 Identities=15% Similarity=0.137 Sum_probs=182.3
Q ss_pred CCCCCceEEecC--CCC--ceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE
Q 021291 5 PPPPDPVAVLRG--HRA--SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (314)
Q Consensus 5 ~~~~~~~~~l~~--h~~--~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (314)
..|..|.++|.+ ..+ .+++|+||+++ +||+| .|++|+|||+++++++..+..+.+...|.+++|+| ++++|+
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l~ 83 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLA 83 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC--CCCEEE
Confidence 455667777764 233 35789999876 77765 59999999999999998887766556799999999 999999
Q ss_pred EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----cee
Q 021291 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDV 156 (314)
Q Consensus 81 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 156 (314)
+|+.||+|++||+++++.+. ....+......+..... .............+...........+.+|.. +.+
T Consensus 84 sgs~Dg~v~iw~~~~~~~~~----~~~~h~~~~~~~~~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 84 VGTSSAEVQLWDVQQQKRLR----NMTSHSARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 158 (318)
T ss_dssp EEETTSEEEEEETTTTEEEE----EEECCSSCEEEEEEETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred EEECCCcEEEeecCCceeEE----EecCccceEEEeecCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE
Confidence 99999999999999987643 34444333333333322 2222333344445555555555555566665 778
Q ss_pred ccCCCceEEEeecCcCeEEEEecCCCceeeeeccccc-----------CCC--------CCc-----------------C
Q 021291 157 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC-----------GGS--------PNF-----------------S 200 (314)
Q Consensus 157 ~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~-----------~~~--------~~h-----------------~ 200 (314)
.++++.++ +++.|+.|++||+++++.......... ... .+. .
T Consensus 159 ~~~~~~l~--s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~ 236 (318)
T 4ggc_A 159 APDGRHLA--SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 236 (318)
T ss_dssp CTTSSEEE--EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE
T ss_pred cCCCCEEE--EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc
Confidence 88887544 677799999999987653211100000 000 000 0
Q ss_pred CCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
......+..+. |+|++. ..++++|+.|+.|++||+++ ++++.++.+|.+.|++|+|+|++++|+|||.||+|+|||
T Consensus 237 ~~~~~~v~~~~-~~~~~~--~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 237 VDAHSQVCSIL-WSPHYK--ELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp EECSSCEEEEE-EETTTT--EEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred ccceeeeeeee-eccccc--ceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 00112234554 777632 21223455899999999998 899999999999999999999999999999999999999
Q ss_pred cCCC
Q 021291 281 LDHS 284 (314)
Q Consensus 281 ~~~~ 284 (314)
+.+.
T Consensus 313 ~~~~ 316 (318)
T 4ggc_A 313 CFEL 316 (318)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8764
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-34 Score=241.02 Aligned_cols=257 Identities=19% Similarity=0.251 Sum_probs=189.9
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCC----------------cccEEEEEEcccCCCCeE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA----------------AHGIVSVATGPSIGLNKV 79 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l 79 (314)
+|.+.|.+++|+|||++||+|+ |+.++||++.+++.+..+..+.. ...|.+++|+| ++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT--TSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC--CCCEE
Confidence 6999999999999999999987 67899999999998888765531 12489999999 99999
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---cee
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDV 156 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 156 (314)
++|+.|++|++||+++++... .+..+........+++.... .......+...+|++......... ..+.. ++|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~ 214 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVM--ILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTL-SIEDGVTTVAV 214 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEE--EEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEEEE-EcCCCcEEEEE
Confidence 999999999999999876533 23333334444444443322 233444566788888776543322 22222 889
Q ss_pred cc-CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEE
Q 021291 157 PA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (314)
Q Consensus 157 ~~-~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (314)
+| ++. +++ +|+.|+.|++||+++++.+..+.... ....+| ...+.++. |+|+ |+ +|++|+.|+.|++
T Consensus 215 ~~~~~~-~l~-~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~h----~~~v~~v~-~~~~---g~-~l~s~s~d~~v~~ 282 (393)
T 1erj_A 215 SPGDGK-YIA-AGSLDRAVRVWDSETGFLVERLDSEN-ESGTGH----KDSVYSVV-FTRD---GQ-SVVSGSLDRSVKL 282 (393)
T ss_dssp CSTTCC-EEE-EEETTSCEEEEETTTCCEEEEEC-------CCC----SSCEEEEE-ECTT---SS-EEEEEETTSEEEE
T ss_pred ECCCCC-EEE-EEcCCCcEEEEECCCCcEEEeecccc-cCCCCC----CCCEEEEE-ECCC---CC-EEEEEeCCCEEEE
Confidence 98 554 444 67779999999999998877664210 000134 55788898 9998 55 8999999999999
Q ss_pred EEccCC-----------CCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEeee
Q 021291 236 WDIRNP-----------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFGI 291 (314)
Q Consensus 236 wd~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~~ 291 (314)
||+++. +.+...+.+|...|.+++|++++.+|++|+.|+.|++||+.+++.+....
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 999752 23456778999999999999999999999999999999999998776543
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=233.68 Aligned_cols=266 Identities=14% Similarity=0.183 Sum_probs=202.8
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
...|.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|... |.+++|+| ++++|++++.||.|++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGT--IWSIDVDC--FTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTTEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCc--EEEEEEcC--CCCEEEEEeCCCeEEE
Confidence 3458899999999999999999999999999999999999999999999854 99999999 9999999999999999
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccC----CCCcceeeccCCce----------eeecCCCCC---C
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA----NEPKDCYEREVGET----------VDTDSLCDS---K 153 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----------~~~~~~~~~---~ 153 (314)
||+.+++... .+. .........+++........... .+...+|++..... ....+..+. .
T Consensus 101 wd~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQCVA--TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCCEEE--EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCcEEE--Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 9999887543 222 22233334444332222211111 14556666644321 011111121 2
Q ss_pred ---ceeccCCCceEEEeecCcCeEEEEecCC-CceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 154 ---DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
++|+|+++.++ +++.|+.|++||+++ .+.+..+. .| ...+.++. |+|+ +. +|++++.
T Consensus 178 ~~~~~~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~l~~~~~ 238 (369)
T 3zwl_B 178 ATVAGWSTKGKYII--AGHKDGKISKYDVSNNYEYVDSID--------LH----EKSISDMQ-FSPD---LT-YFITSSR 238 (369)
T ss_dssp EEEEEECGGGCEEE--EEETTSEEEEEETTTTTEEEEEEE--------CC----SSCEEEEE-ECTT---SS-EEEEEET
T ss_pred eeEEEEcCCCCEEE--EEcCCCEEEEEECCCCcEeEEEEe--------cC----CCceeEEE-ECCC---CC-EEEEecC
Confidence 88999987554 566789999999998 67777776 45 44788887 9998 54 8999999
Q ss_pred CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCC--------------cEEEEecCCCeeeEee-----
Q 021291 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--------------KIVLYNLDHSTYVLFG----- 290 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--------------~i~iw~~~~~~~~~~~----- 290 (314)
|+.|++||+++ ++.+..+. +...+..++|+|++.++++++.++ .+++||+.+++.+...
T Consensus 239 d~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 316 (369)
T 3zwl_B 239 DTNSFLVDVST-LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG 316 (369)
T ss_dssp TSEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS
T ss_pred CceEEEEECCC-Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC
Confidence 99999999998 77777777 788999999999999999999988 8999999999877653
Q ss_pred --eeeeecCCCceece
Q 021291 291 --IGFVCDQEGNKFGT 304 (314)
Q Consensus 291 --~~~~~~~~~~~~~~ 304 (314)
..++++|++..+++
T Consensus 317 ~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 317 PLNTVAISPQGTSYAS 332 (369)
T ss_dssp CEEEEEECTTSSEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 34567788876665
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.4e-34 Score=240.86 Aligned_cols=252 Identities=15% Similarity=0.207 Sum_probs=190.4
Q ss_pred CCceEEe--cCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 8 PDPVAVL--RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 8 ~~~~~~l--~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
++.++.+ .+|...|++++|+|+|++||+|+.||.|+|||+++++++..+.+|... |.++++++ ..|++|+.|
T Consensus 135 g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~--v~~~s~~~----~~l~sgs~d 208 (420)
T 4gga_A 135 GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--VGSLSWNS----YILSSGSRS 208 (420)
T ss_dssp CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEET----TEEEEEETT
T ss_pred CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc--eEEEeeCC----CEEEEEeCC
Confidence 4555554 478889999999999999999999999999999999999999999854 99988865 799999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeeccee--eEEEeeeeeccccccccCCCCcceeeccCCce---eeecCCCCCC----cee
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSY--HFCKLSLVKEPYANAKQANEPKDCYEREVGET---VDTDSLCDSK----DDV 156 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~ 156 (314)
+.+++||....... ...+..+.. ....+.+... ........+...+|+...... .......|.. ++|
T Consensus 209 ~~i~~~d~~~~~~~---~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 209 GHIHHHDVRVAEHH---VATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp SEEEEEETTSSSCE---EEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred CceeEeeeccccee---eEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeee
Confidence 99999999875432 223333322 2222222221 222333445566777655432 2223334444 889
Q ss_pred ccCCCceEEE-eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE--eecCCcE
Q 021291 157 PAEGPKYMAV-AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSI 233 (314)
Q Consensus 157 ~~~~~~~~~~-~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg~i 233 (314)
+|.+..++++ +|+.|++|++||+++++....+. .| ..+.++. |+|+ +. .+++ |+.|+.|
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------~~-----~~v~~~~-~~~~---~~-~lv~~sg~~d~~I 346 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AH-----SQVCSIL-WSPH---YK-ELISGHGFAQNQL 346 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--------CS-----SCEEEEE-EETT---TT-EEEEEECTTTCCE
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCccccceeec--------cc-----cceeeee-ecCC---CC-eEEEEEecCCCEE
Confidence 9998887765 46789999999999999888877 22 3566776 9998 44 4444 4479999
Q ss_pred EEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 234 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 234 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+|||+++ ++++.++.+|.+.|++|+|+|+|.+|+|||.|++|+|||+.......
T Consensus 347 ~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 347 VIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred EEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 9999998 89999999999999999999999999999999999999997665443
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.5e-34 Score=234.77 Aligned_cols=266 Identities=15% Similarity=0.105 Sum_probs=192.7
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +....+.+|... |.+++|+|..++++|++++.|
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS--IVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC--EEEEEECCGGGCSEEEEEETT
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc--EEEEEEcCCCCCCEEEEEcCC
Confidence 44567899999999999999999999999999999999876 467777888854 999999983337899999999
Q ss_pred CeEEEEeCCCCCCCC-----CCeeeeec--ceeeEEEeeeee-ccccccccCCCCcceeeccCCceeee--------c--
Q 021291 86 GTVKCWDIENGGLSS-----NPSLTIKT--NSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGETVDT--------D-- 147 (314)
Q Consensus 86 g~v~iwd~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-- 147 (314)
|+|++||+++++... ++...+.. .......+.+.. ..........+...+|++........ .
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 999999998874321 11222222 233333343331 12233344556677888765542211 0
Q ss_pred --CCCCCC----ceeccC---CCceEEEeecCcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCC
Q 021291 148 --SLCDSK----DDVPAE---GPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS 216 (314)
Q Consensus 148 --~~~~~~----~~~~~~---~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~ 216 (314)
...+.. ++|+|+ +. .++ +++.|+.+.+|+...++. +..+. +| ...+.++. |+|+
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~h----~~~i~~~~-~~p~ 225 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPE-KLA-VSALEQAIIYQRGKDGKLHVAAKLP--------GH----KSLIRSIS-WAPS 225 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCC-EEE-EEETTEEEEEEECTTSCEEEEEECC--------CC----CSCEEEEE-ECCC
T ss_pred cccCCcccceeEEEeccCCCCCc-EEE-EecCCCcEEEEccCCCceeeeeecC--------CC----CcceeEEE-ECCC
Confidence 112222 888887 54 444 455689998888777665 44444 55 45788888 9998
Q ss_pred CCCCceEEEEeecCCcEEEEEccCC---------------------------------------------CCceEeeecC
Q 021291 217 KSQGFVNVLAGYEDGSILVWDIRNP---------------------------------------------GIPLTAMKVH 251 (314)
Q Consensus 217 ~~~g~~~l~~g~~dg~i~vwd~~~~---------------------------------------------~~~~~~~~~h 251 (314)
+.....+|++|+.||.|++||++.. .+++..+.+|
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 4211138999999999999999862 1566778899
Q ss_pred CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEeeee
Q 021291 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFGIG 292 (314)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 292 (314)
...|++++|+|++++|++++.||.|++|++.+++.+..+..
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence 99999999999999999999999999999999877665443
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-34 Score=233.09 Aligned_cols=253 Identities=14% Similarity=0.168 Sum_probs=176.4
Q ss_pred CceEEe-cC-CCCceeEEEEccCCCEEEEecCCCeEEEEeCCC-------CeEEEEEeccCCcccEEEEEEcccCCCCeE
Q 021291 9 DPVAVL-RG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-------HRTVSSSWVHSAAHGIVSVATGPSIGLNKV 79 (314)
Q Consensus 9 ~~~~~l-~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 79 (314)
+.+..+ .+ |.+.|.+++|+|++++|++|+.|++|+|||++. .+.+..+.+|... |.+++|+| ++++|
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~sp--~g~~l 122 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE--VKGVAWSN--DGYYL 122 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----C--EEEEEECT--TSCEE
T ss_pred EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCc--EEEEEECC--CCCEE
Confidence 345556 45 999999999999999999999999999999853 3567788888854 99999999 99999
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCCc-eeeecCCCCCC---
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE-TVDTDSLCDSK--- 153 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 153 (314)
++|+.|++|++||++......+....+ +........+++... ........+...+|+..... .....+.+|..
T Consensus 123 as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEE
Confidence 999999999999995432111112222 333444444544332 22334445667788776543 34556677876
Q ss_pred -ceeccCCCceEEEeecCcCeEEEEecCCC--------ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEE
Q 021291 154 -DDVPAEGPKYMAVAGEQLSEVEIWDLNTA--------ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (314)
Q Consensus 154 -~~~~~~~~~~~~~~g~~d~~i~vwd~~~~--------~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l 224 (314)
++|+|++....+++|+.|++|++||++.+ .....+.. .| ...+.++. |+|+ + +|
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-------~h----~~~v~~v~-~s~~---~--~l 264 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD-------VH----KRQVYNVA-WGFN---G--LI 264 (330)
T ss_dssp EEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS-------CC----SSCEEEEE-ECTT---S--CE
T ss_pred EEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc-------cc----ccceEEEE-EcCC---C--EE
Confidence 88999854334447888999999998754 22233321 24 45788887 9964 3 69
Q ss_pred EEeecCCcEEEEEccCCCC--ceE-eeecCCc-ceEEEEEeC--CCCeEEEecCCCcEEEEecCCC
Q 021291 225 LAGYEDGSILVWDIRNPGI--PLT-AMKVHLE-PVLCLSIDE--SCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 225 ~~g~~dg~i~vwd~~~~~~--~~~-~~~~h~~-~v~~~~~~~--~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
++++.||.|++||... +. .+. .+.+|.. .|++++|+| ++.+|++|+.||.|++|+++..
T Consensus 265 ~s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 265 ASVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEEETTSCEEEEEEET-TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEEeCCCEEEEEEcCC-CceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 9999999999999986 42 232 3467887 899999998 7889999999999999998753
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-35 Score=243.37 Aligned_cols=262 Identities=16% Similarity=0.162 Sum_probs=189.3
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCC--CCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
++++..+++|.+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|... |.+++|++..++++|++++.|
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECCGGGCSEEEEEETT
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCc--EEEEEeCCCCCCCEEEEeccC
Confidence 35678899999999999999999999999999999999998 55677788888854 999999972238999999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeee-ccccccccCCCCcceeeccCCce-eeecCCCCCC----ceecc-
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPA- 158 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~- 158 (314)
|.|++||+++++......+..+........+++.. ..........+...+|++..... ....+..|.. ++|+|
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 99999999987522111222233344444444432 22334445556778888876632 2223344544 88998
Q ss_pred ------------CCCceEEEeecCcCeEEEEecCCCcee----eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCce
Q 021291 159 ------------EGPKYMAVAGEQLSEVEIWDLNTAERC----TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 159 ------------~~~~~~~~~g~~d~~i~vwd~~~~~~~----~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~ 222 (314)
++.. ++ +++.|+.|++||++++... ..+. +| ...+.++. |+|+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~-l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~sp~~~~~~- 222 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRK-FV-TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS- 222 (379)
T ss_dssp C----------CTTCE-EE-EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-
T ss_pred cccccccccCCCCCCE-EE-EEeCCCeEEEEEecCCCcceeeEEEEe--------cc----cCcEeEEE-ECCCCCCCC-
Confidence 4553 43 5677999999999876533 3344 45 45788887 999831123
Q ss_pred EEEEeecCCcEEEEEccCCCCc----eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeee
Q 021291 223 NVLAGYEDGSILVWDIRNPGIP----LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
+|++++.||.|++||++..... +.....|...|++++|+|++.+|++++.||.|++|+++.+...
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 9999999999999999973221 2222348889999999999999999999999999999865443
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.4e-34 Score=238.54 Aligned_cols=259 Identities=17% Similarity=0.212 Sum_probs=199.0
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe------EEEEEeccCCcccEEEEEEcccCC----C--
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------TVSSSWVHSAAHGIVSVATGPSIG----L-- 76 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~----~-- 76 (314)
...+.+++|.+.|++++|+| ++|++|+.||.|++||+.+++ .+..+..|... |.+++|+| + +
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~~g~~ 80 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG--LHHVDVLQ--AIERDAFE 80 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTC--EEEEEEEE--EEETTTEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCc--EEEEEEec--ccccCCcc
Confidence 45678899999999999998 799999999999999999887 78888888854 99999999 8 8
Q ss_pred -CeEEEeecCCeEEEEeCCCCCCCCCC-eeeeec-------ceeeEEEee----eeeccccccccCCCCcceeeccC---
Q 021291 77 -NKVISQGRDGTVKCWDIENGGLSSNP-SLTIKT-------NSYHFCKLS----LVKEPYANAKQANEPKDCYEREV--- 140 (314)
Q Consensus 77 -~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~-------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--- 140 (314)
.+|++++.||.|++||+.+++..... ...+.. .......+. +............+...+|++..
T Consensus 81 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 81 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred ccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 99999999999999999987641111 112222 334444444 33322133344556778888876
Q ss_pred ---Cceee----ecC-------CCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCC---c
Q 021291 141 ---GETVD----TDS-------LCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPN---F 199 (314)
Q Consensus 141 ---~~~~~----~~~-------~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~---h 199 (314)
..... ..+ ..|.. ++|+|++ +++ +++.|+.|++||+++++.+..+. . |
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~-~~~~dg~i~i~d~~~~~~~~~~~--------~~~~h 229 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIA-TGFNNGTVQISELSTLRPLYNFE--------SQHSM 229 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEE-EECTTSEEEEEETTTTEEEEEEE--------CCC--
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEE-EEeCCCcEEEEECCCCceeEEEe--------ccccc
Confidence 33221 011 22333 8999998 443 57779999999999999888887 4 4
Q ss_pred CCCCCceeeeEEEecCCCCCCceEEEEeecC---CcEEEEEccCCCCceEeeec-------------CCcceEEEEEeCC
Q 021291 200 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---GSILVWDIRNPGIPLTAMKV-------------HLEPVLCLSIDES 263 (314)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d---g~i~vwd~~~~~~~~~~~~~-------------h~~~v~~~~~~~~ 263 (314)
.. ....+.++. |+|+ +. +|++++.| +.|++||+++ ++++..+.+ |...|.+++|+|+
T Consensus 230 ~~-~~~~i~~i~-~~~~---~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 230 IN-NSNSIRSVK-FSPQ---GS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp -C-CCCCEEEEE-ECSS---TT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred cc-cCCccceEE-ECCC---CC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCC
Confidence 11 134678887 9998 55 89999999 9999999998 788889988 9999999999999
Q ss_pred CCeEEEecCCCcEEEEecCCCeeeEeee
Q 021291 264 CNGGISGGADQKIVLYNLDHSTYVLFGI 291 (314)
Q Consensus 264 ~~~l~s~s~dg~i~iw~~~~~~~~~~~~ 291 (314)
+.+|++++.||.|++||+++++.+..+.
T Consensus 303 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 303 GETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999999999999999998776655
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=223.43 Aligned_cols=265 Identities=14% Similarity=0.204 Sum_probs=199.7
Q ss_pred CCCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 6 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
.+.++++++++|.+.|++++| +++++|++|+.||.|++||+.+++....+..|.. .|.+++|+| ++++|++++.|
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~l~~~~~d 80 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG--FLNSVCYDS--EKELLLFGGKD 80 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSS--CEEEEEEET--TTTEEEEEETT
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc--cEEEEEECC--CCCEEEEecCC
Confidence 344788999999999999999 9999999999999999999999999999988884 499999999 99999999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc-CC
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA-EG 160 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~ 160 (314)
|.|++|++....... +...+..+......+... ..........+...+|+ .......+..|.. +++.| ++
T Consensus 81 g~i~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 81 TMINGVPLFATSGED-PLYTLIGHQGNVCSLSFQ-DGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp SCEEEEETTCCTTSC-C-CEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred CeEEEEEeeecCCCC-cccchhhcccCEEEEEec-CCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCC
Confidence 999999998754221 122333333333333332 22333344445566666 3333334444544 67777 55
Q ss_pred CceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 161 ~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
+ .++ +++.|+.|++|| ..+....+.. .| ...+.++. |+|+ + .+++++.||.|++||+++
T Consensus 156 ~-~l~-~~~~d~~i~i~d--~~~~~~~~~~-------~~----~~~i~~~~-~~~~---~--~~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 156 N-KFL-TASADKTIKLWQ--NDKVIKTFSG-------IH----NDVVRHLA-VVDD---G--HFISCSNDGLIKLVDMHT 214 (313)
T ss_dssp T-EEE-EEETTSCEEEEE--TTEEEEEECS-------SC----SSCEEEEE-EEET---T--EEEEEETTSEEEEEETTT
T ss_pred C-EEE-EEECCCCEEEEe--cCceEEEEec-------cC----cccEEEEE-EcCC---C--eEEEccCCCeEEEEECCc
Confidence 5 444 566789999999 3445555551 13 45788887 9987 4 488999999999999998
Q ss_pred CCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe-------eeeeeecCCCceec
Q 021291 241 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF-------GIGFVCDQEGNKFG 303 (314)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-------~~~~~~~~~~~~~~ 303 (314)
++++..+.+|...|++++|+|++ .|++++.||.|++||+++++.+.. +..+.+++++..+.
T Consensus 215 -~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 215 -GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIV 282 (313)
T ss_dssp -CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred -hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEE
Confidence 88999999999999999999999 589999999999999999987664 34455677776443
No 41
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.5e-33 Score=248.89 Aligned_cols=252 Identities=15% Similarity=0.218 Sum_probs=194.8
Q ss_pred ceEEecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCC-----CeEEEEEeccCCcccEEEEEEcccCCCCeEEEee
Q 021291 10 PVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
....+++|.+.|++++|+|+ +++|+||+.||+|++||+.+ +.....+.+|... |.+++|+| ++++|++|+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~--v~~v~~s~--~g~~l~sgs 449 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHF--VEDVVLSS--DGQFALSGS 449 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSC--EEEEEECT--TSSEEEEEE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCc--EEEEEECC--CCCEEEEEe
Confidence 34578999999999999986 47999999999999999875 3456778889855 99999999 999999999
Q ss_pred cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceee--ecCCCCCC----ceec
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD--TDSLCDSK----DDVP 157 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~ 157 (314)
.||+|++||+.++.... .+..+........+++.... .......+...+|+........ ....+|.. ++|+
T Consensus 450 ~Dg~v~vwd~~~~~~~~--~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTR--RFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp TTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred CCCcEEEEECCCCccee--EEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 99999999999886543 33334444455555544322 2233445667777765443322 22345655 8899
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
|++...++++++.|++|++||+++++....+. +| .+.+.++. |+|+ ++ +|++|+.||.|++||
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~--------~h----~~~v~~v~-~spd---g~-~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA--------GH----TGYVSTVA-VSPD---GS-LCASGGKDGVVLLWD 589 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTCCEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSBCEEEE
T ss_pred CCCCcceEEEEeCCCeEEEEECCCCcEEEEEc--------CC----CCCEEEEE-EeCC---CC-EEEEEeCCCeEEEEE
Confidence 98754344478889999999999999888887 67 45788887 9998 55 999999999999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+++ ++++..+.. ...|.+++|+|++.+|++++ |+.|++||+++++.+.
T Consensus 590 ~~~-~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 590 LAE-GKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp TTT-TEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CCC-CceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence 998 777777764 56899999999998777665 5669999999987654
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2e-33 Score=256.09 Aligned_cols=268 Identities=15% Similarity=0.157 Sum_probs=214.2
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
+..+.+.+|.+.|++++|+|++++|++|+.||.|+|||+.+++.+..+..|... |.+++|+| ++++|++++.||.|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP--VRAGKFIA--RKNWIIVGSDDFRI 79 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEEEG--GGTEEEEEETTSEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc--EEEEEEeC--CCCEEEEEeCCCeE
Confidence 567899999999999999999999999999999999999999999999999854 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc-CCCce
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA-EGPKY 163 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~ 163 (314)
++||+.+++... .+..+........+++.... .......+...+|++.........+.+|.. ++|+| ++. .
T Consensus 80 ~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~ 155 (814)
T 3mkq_A 80 RVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-T 155 (814)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-E
T ss_pred EEEECCCCcEEE--EEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-E
Confidence 999999887543 33333344444555544332 233445567788888877666666666665 89999 554 4
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
++ +++.||.|++||+.+++....+. .+ ....+..+. |+|.. ++. ++++++.||.|++||+++ ++
T Consensus 156 l~-~~~~dg~v~vwd~~~~~~~~~~~--------~~---~~~~v~~~~-~~~~~-~~~-~l~~~~~dg~i~~~d~~~-~~ 219 (814)
T 3mkq_A 156 FA-SGCLDRTVKVWSLGQSTPNFTLT--------TG---QERGVNYVD-YYPLP-DKP-YMITASDDLTIKIWDYQT-KS 219 (814)
T ss_dssp EE-EEETTSEEEEEETTCSSCSEEEE--------CC---CTTCCCEEE-ECCST-TCC-EEEEECTTSEEEEEETTT-TE
T ss_pred EE-EEeCCCeEEEEECCCCcceeEEe--------cC---CCCCEEEEE-EEECC-CCC-EEEEEeCCCEEEEEECCC-Cc
Confidence 44 56679999999999888777766 22 124566776 99831 155 899999999999999998 88
Q ss_pred ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCc
Q 021291 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGN 300 (314)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~ 300 (314)
++..+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+... ..++++|++.
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR 283 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC
Confidence 89999999999999999999999999999999999999988776542 3345566665
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-34 Score=245.82 Aligned_cols=219 Identities=15% Similarity=0.197 Sum_probs=166.8
Q ss_pred CceEEecCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEE--EEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVS--SSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
+......+|...|+||+|+| ++++||+|+.||.|+|||+.+++... .+.+|. ..|.+|+|+|. ++++|++|+.|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~--~~V~~l~f~p~-~~~~l~s~s~D 186 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG--GSITGLKFNPL-NTNQFYASSME 186 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS--CCCCEEEECSS-CTTEEEEECSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC--CCEEEEEEeCC-CCCEEEEEeCC
Confidence 45667778999999999999 67899999999999999998765444 445676 55999999984 56899999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEE
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (314)
|+|++||++++.... ........... ..++|+|++..++
T Consensus 187 ~~v~iwd~~~~~~~~--~~~~~~~~~~~--------------------------------------~~~~~~~~~~~l~- 225 (435)
T 4e54_B 187 GTTRLQDFKGNILRV--FASSDTINIWF--------------------------------------CSLDVSASSRMVV- 225 (435)
T ss_dssp SCEEEEETTSCEEEE--EECCSSCSCCC--------------------------------------CCEEEETTTTEEE-
T ss_pred CEEEEeeccCCceeE--EeccCCCCccE--------------------------------------EEEEECCCCCEEE-
Confidence 999999998653210 00000000000 0056889887443
Q ss_pred EeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC--
Q 021291 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-- 243 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~-- 243 (314)
+|+.||.|++||++. +.+..+. +| ...+.++. |+|+ +..++++|+.|+.|++||+++...
T Consensus 226 -~g~~dg~i~~wd~~~-~~~~~~~--------~h----~~~v~~v~-~~p~---~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 226 -TGDNVGNVILLNMDG-KELWNLR--------MH----KKKVTHVA-LNPC---CDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp -EECSSSBEEEEESSS-CBCCCSB--------CC----SSCEEEEE-ECTT---CSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred -EEeCCCcEeeeccCc-ceeEEEe--------cc----cceEEeee-ecCC---CceEEEEecCcceeeEEecccccccc
Confidence 677899999999874 4455555 56 44788887 9998 333899999999999999987322
Q ss_pred ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.+....+|..+|++++|+|++.+|++++.||.|++||+.+++....
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 2233468999999999999999999999999999999998876554
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-32 Score=224.55 Aligned_cols=261 Identities=16% Similarity=0.177 Sum_probs=197.0
Q ss_pred EecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe---EEEEEe--ccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSW--VHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
...+|.+.|++++|+|++++|++++ ||.|++||+.+++ .+..+. .|. ..|.+++|+| ++++|++++.|+.
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--NYIRSCKLLP--DGCTLIVGGEAST 120 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--SBEEEEEECT--TSSEEEEEESSSE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC--CcEEEEEEcC--CCCEEEEEcCCCc
Confidence 3447999999999999999999999 9999999998764 333444 455 5599999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCeeeeecc--eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCC
Q 021291 88 VKCWDIENGGLSSNPSLTIKTN--SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGP 161 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 161 (314)
|++||+++++... ...+..+ ......+++... ........+...+|++....... .+..|.. ++|+|+++
T Consensus 121 i~~~d~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 121 LSIWDLAAPTPRI--KAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISNDGT 196 (337)
T ss_dssp EEEEECCCC--EE--EEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCCcce--eeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceee-eeecccCceEEEEECCCCC
Confidence 9999999876322 2233322 233333333221 22233445667788887765443 3444544 89999987
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (314)
.++ +++.|+.|++||+++++.+..+. ....+.++. |+|+ ++ ++++++.++.|++||++.
T Consensus 197 ~l~--~~~~dg~i~~~d~~~~~~~~~~~-------------~~~~v~~~~-~s~~---~~-~l~~~~~~~~i~~~~~~~- 255 (337)
T 1gxr_A 197 KLW--TGGLDNTVRSWDLREGRQLQQHD-------------FTSQIFSLG-YCPT---GE-WLAVGMESSNVEVLHVNK- 255 (337)
T ss_dssp EEE--EEETTSEEEEEETTTTEEEEEEE-------------CSSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTS-
T ss_pred EEE--EEecCCcEEEEECCCCceEeeec-------------CCCceEEEE-ECCC---CC-EEEEEcCCCcEEEEECCC-
Confidence 554 56678999999999998877765 244678887 9998 55 899999999999999997
Q ss_pred CCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe------eeeeeecCCCceece
Q 021291 242 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~~~~~ 304 (314)
.+ ...+..|...|.+++|+|++++|++++.||.|++||+++++.+.. +..+.+++++..+.+
T Consensus 256 ~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 256 PD-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp SC-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEE
T ss_pred CC-eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEE
Confidence 43 456788999999999999999999999999999999999887754 344567777766654
No 45
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.2e-33 Score=237.85 Aligned_cols=252 Identities=17% Similarity=0.237 Sum_probs=196.9
Q ss_pred CCCceEEecCCCCce-eEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 7 PPDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
.......+++|...| .++.+ ++++|++|+.||.|++||+.+++.+..+.+|... |.+++|+| ++ .|++|+.|
T Consensus 110 ~~~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~--V~~l~~~~--~~-~l~s~s~d 182 (464)
T 3v7d_B 110 FVPQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGG--VWALKYAH--GG-ILVSGSTD 182 (464)
T ss_dssp CCCEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECS--TT-EEEEEETT
T ss_pred cCcceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcC--EEEEEEcC--CC-EEEEEeCC
Confidence 335677899999885 56666 5679999999999999999999999999999855 99999998 75 99999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeec-cccccccCCCCcceeeccCCcee--------------------
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETV-------------------- 144 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------------- 144 (314)
|+|++||+++++... .+..+........+..... .........+...+|++......
T Consensus 183 g~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 183 RTVRVWDIKKGCCTH--VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp SCEEEEETTTTEEEE--EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCT
T ss_pred CCEEEEECCCCcEEE--EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCe
Confidence 999999999886533 2222333333333332211 23334455567777887655422
Q ss_pred --eecCCCCCC--ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCC
Q 021291 145 --DTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (314)
Q Consensus 145 --~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g 220 (314)
.....+|.. .+++++++.++ +|+.|+.|++||+++++.+..+. +| ...+.++. |+|+ +
T Consensus 261 ~~~~~~~~~~~~v~~~~~~~~~l~--~~~~d~~i~vwd~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~ 322 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVSGHGNIVV--SGSYDNTLIVWDVAQMKCLYILS--------GH----TDRIYSTI-YDHE---R 322 (464)
T ss_dssp TEEEEECCCSSCEEEEEEETTEEE--EEETTSCEEEEETTTTEEEEEEC--------CC----SSCEEEEE-EETT---T
T ss_pred EEEEEccCccceEEEEcCCCCEEE--EEeCCCeEEEEECCCCcEEEEec--------CC----CCCEEEEE-EcCC---C
Confidence 234455555 66778876544 56779999999999999988887 66 44788887 9998 4
Q ss_pred ceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 221 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
. ++++|+.||.|++||+++ ++++..+.+|...|.+++|++ .+|++++.||.|++||+++++....
T Consensus 323 ~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 323 K-RCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp T-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred C-EEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCcEEEEECCCCceeee
Confidence 4 899999999999999998 889999999999999999985 5899999999999999999876654
No 46
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=233.11 Aligned_cols=269 Identities=17% Similarity=0.189 Sum_probs=190.7
Q ss_pred CCceEEecCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEEEe-------------ccCCcccEEEEEEccc
Q 021291 8 PDPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSW-------------VHSAAHGIVSVATGPS 73 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~ 73 (314)
.+....+++|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. +|. ..|.+++|+|.
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~ 110 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR--YSVETVQWYPH 110 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS--SCEEEEEECTT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC--CcEEEEEEccC
Confidence 466788999999999999999 99999999999999999999875543332 366 55999999984
Q ss_pred CCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeecc--ccccccCCCCcceeeccCCceeeecCCCC
Q 021291 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP--YANAKQANEPKDCYEREVGETVDTDSLCD 151 (314)
Q Consensus 74 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (314)
++.+|++++.||.|++||+.+++... .+.. ........+.+.... ........+...+|++....... .+..|
T Consensus 111 -~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~~ 185 (408)
T 4a11_B 111 -DTGMFTSSSFDKTLKVWDTNTLQTAD--VFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH-ILQGH 185 (408)
T ss_dssp -CTTCEEEEETTSEEEEEETTTTEEEE--EEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE-EECCC
T ss_pred -CCcEEEEEeCCCeEEEeeCCCCccce--eccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee-eecCC
Confidence 45689999999999999999876533 2221 122222333332211 23344555677888887665433 34455
Q ss_pred CC----ceeccCCCceEEEeecCcCeEEEEecCCCc-eeeeeccccc---CCCCCcCCCCCceeeeEEEecCCCCCCceE
Q 021291 152 SK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSC---GGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (314)
Q Consensus 152 ~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~-~~~~~~~~~~---~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~ 223 (314)
.. ++|+|+++++++ +++.||.|++||++++. .+..+..... .............+.++. |+|+ ++ +
T Consensus 186 ~~~v~~~~~~~~~~~ll~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~---~~-~ 259 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILA-TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC-FTSD---GL-H 259 (408)
T ss_dssp CSCEEEEEECSSCTTEEE-EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE-ECTT---SS-E
T ss_pred CCcEEEEEECCCCCcEEE-EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE-EcCC---CC-E
Confidence 54 899999987665 56679999999998776 3333321000 000000122356788887 9998 55 8
Q ss_pred EEEeecCCcEEEEEccCC----------------------------------------------CCceEeeecCCcceEE
Q 021291 224 VLAGYEDGSILVWDIRNP----------------------------------------------GIPLTAMKVHLEPVLC 257 (314)
Q Consensus 224 l~~g~~dg~i~vwd~~~~----------------------------------------------~~~~~~~~~h~~~v~~ 257 (314)
|++++.||.|++||+++. ++++..+.+|...|++
T Consensus 260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~ 339 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC 339 (408)
T ss_dssp EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE
Confidence 999999999999998752 2345667789999999
Q ss_pred EEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 258 LSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 258 ~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
++|+|++.+|++++.||.|++||+++++.+..
T Consensus 340 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 340 CVFQSNFQELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEECC------
T ss_pred EEEcCCCCEEEEECCCCeEEEEeCCCCCccCC
Confidence 99999999999999999999999999877653
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=247.35 Aligned_cols=273 Identities=10% Similarity=0.032 Sum_probs=191.7
Q ss_pred CCceEEecCCCCceeEEEEccCC---------CEEEE-------------------ecCCCeEEEEeCCCCeE----EEE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTK---------PILFA-------------------GTTGGELRIWDTVQHRT----VSS 55 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~---------~~l~s-------------------~~~dg~v~iwd~~~~~~----~~~ 55 (314)
.+...++. +.+.|.+++|+|++ ++||+ ++.|++|+|||+.+++. ...
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 34455555 68899999999976 56665 55789999999987654 234
Q ss_pred EeccCCcccEEEEEEccc----CCCCeEEEeecCCeEEEEeCCCCCCC-------CCCeeeeec--ceeeEEEeeeeecc
Q 021291 56 SWVHSAAHGIVSVATGPS----IGLNKVISQGRDGTVKCWDIENGGLS-------SNPSLTIKT--NSYHFCKLSLVKEP 122 (314)
Q Consensus 56 ~~~~~~~~~v~~~~~~~~----~~~~~l~s~~~dg~v~iwd~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~ 122 (314)
+..|.. .|.+++|+|. .++.+|++++.||+|++||+.++... .++...+.. .....+.++. ..
T Consensus 203 l~~~~~--~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~ 278 (524)
T 2j04_B 203 IVHSFG--EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PT 278 (524)
T ss_dssp EEECCC--SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SS
T ss_pred EEecCC--cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CC
Confidence 556664 4999999992 12579999999999999999876532 122223332 3333444432 22
Q ss_pred ccccccCCCCcceeeccCCceeeecCCCCCC----c--eeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCC
Q 021291 123 YANAKQANEPKDCYEREVGETVDTDSLCDSK----D--DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS 196 (314)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 196 (314)
........+...+|++.........+.+|.. + +|++++..+++ +++.|++|+|||+++++++..+.
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la-S~S~D~tvklWD~~~~~~~~~~~------- 350 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS-TVAVDGYFYIFNPKDIATTKTTV------- 350 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE-EEETTSEEEEECGGGHHHHCEEE-------
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE-EeccCCeEEEEECCCCCcccccc-------
Confidence 3445556677888988765444444566766 4 46677645555 67789999999999988777666
Q ss_pred CCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcE
Q 021291 197 PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI 276 (314)
Q Consensus 197 ~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 276 (314)
+|... ..+.+++ |+|+ ++ .+++++.|++|++||+++ +.++..+.+|...|++|+|+|++++|++|+.||+|
T Consensus 351 -~~~~~--~~v~~v~-fsp~---~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 351 -SRFRG--SNLVPVV-YCPQ---IY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp -EECSC--CSCCCEE-EETT---TT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEE
T ss_pred -ccccc--CcccceE-eCCC---cC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEE
Confidence 45321 2356777 9998 55 799999999999999998 77778899999999999999999999999999999
Q ss_pred EEEecCCCeeeE-----------eeeeeeecCCCcee
Q 021291 277 VLYNLDHSTYVL-----------FGIGFVCDQEGNKF 302 (314)
Q Consensus 277 ~iw~~~~~~~~~-----------~~~~~~~~~~~~~~ 302 (314)
++||+..+.... .+..++++|++..+
T Consensus 422 ~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 422 IITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp ECCBSCSSTTTCC------CCCCEEEECBCCSSSCEE
T ss_pred EEEechHhhccccccCccceeeeEEEEeccCCCCCeE
Confidence 999976431110 12355667777643
No 48
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=230.32 Aligned_cols=261 Identities=11% Similarity=0.098 Sum_probs=184.3
Q ss_pred CCCCCCCCCceEEecCCCCceeEEEEccCCC-EEEEecC---CCeEEEEeCCCCeEEEEEe-ccCCcccEEEEEEcccCC
Q 021291 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKP-ILFAGTT---GGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIG 75 (314)
Q Consensus 1 m~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~---dg~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 75 (314)
|.....|....+.+++|.+.|.+++|+|++. ++++|+. ||.|+|||+.+++...... .|. ..|.+++|+| +
T Consensus 1 m~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~--~~v~~~~~~~--~ 76 (357)
T 3i2n_A 1 MSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA--KPIKCGTFGA--T 76 (357)
T ss_dssp ----CCCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES--SCEEEEECTT--C
T ss_pred CCccChhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc--CcEEEEEEcC--C
Confidence 5555566566677889999999999999886 4556766 9999999999887654433 566 4599999999 7
Q ss_pred ---CCeEEEeecCCeEEEEeCCCCC-CCCCCeeeeecceeeEEEeee--eecc---ccccccCCCCcceeeccCCceeee
Q 021291 76 ---LNKVISQGRDGTVKCWDIENGG-LSSNPSLTIKTNSYHFCKLSL--VKEP---YANAKQANEPKDCYEREVGETVDT 146 (314)
Q Consensus 76 ---~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 146 (314)
+.+|++++.||.|++||+.+++ ... .+..+........+.. ...+ ........+...+|++........
T Consensus 77 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 77 SLQQRYLATGDFGGNLHIWNLEAPEMPVY--SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp CTTTCCEEEEETTSCEEEECTTSCSSCSE--EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred CCCCceEEEecCCCeEEEEeCCCCCccEE--EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 6999999999999999999876 322 2222333333332221 1111 223344456778888877653333
Q ss_pred cCC---CCCC-----ce----eccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEec
Q 021291 147 DSL---CDSK-----DD----VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 214 (314)
Q Consensus 147 ~~~---~~~~-----~~----~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 214 (314)
.+. ++.. ++ |+|++..++ +++.|+.|++||+++++...... | ...+.++. |+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~---------~----~~~v~~~~-~~ 218 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVC--AGYDNGDIKLFDLRNMALRWETN---------I----KNGVCSLE-FD 218 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEE--EEETTSEEEEEETTTTEEEEEEE---------C----SSCEEEEE-ES
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEE--EEccCCeEEEEECccCceeeecC---------C----CCceEEEE-cC
Confidence 222 2211 34 678887544 56678999999999988755433 3 44788887 99
Q ss_pred CCCCCCceEEEEeecCCcEEEEEccCCCCceEeee-----cCCcceEEEEEeCCCC-eEEEecCCCcEEEEecCCCe
Q 021291 215 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-----VHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 215 p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~-~l~s~s~dg~i~iw~~~~~~ 285 (314)
|...++. ++++|+.||.|++||+++ ++++..+. +|...|++++|+|++. +|++++.||.|++||++.+.
T Consensus 219 ~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 219 RKDISMN-KLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp CSSSSCC-EEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCCCCCC-EEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 9321145 899999999999999987 55554444 8999999999999998 89999999999999998653
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8e-33 Score=227.00 Aligned_cols=250 Identities=19% Similarity=0.261 Sum_probs=188.6
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
.+.+++++|...|.+++|+|++++|++|+.|+.|++|+............+... +..+.+++ ++..|++++.|+.+
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~l~s~s~d~~~ 152 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD--VLSVAFSS--DNRQIVSGSRDKTI 152 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECT--TSSCEEEEETTSCE
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc--eeEEEEee--cCccceeecCCCeE
Confidence 467889999999999999999999999999999999999999888888777744 89999999 88999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccc-cccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCce
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY-ANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (314)
++||+........ ....+........+....... ...........+|++....... .+.+|.. ++|+|+++.+
T Consensus 153 ~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l 230 (340)
T 4aow_A 153 KLWNTLGVCKYTV-QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT-NHIGHTGYLNTVTVSPDGSLC 230 (340)
T ss_dssp EEECTTSCEEEEE-CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCceEEE-EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceee-EecCCCCcEEEEEECCCCCEE
Confidence 9999876532110 011112223333333332222 2233344567778887765443 4456665 8899998754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+ +|+.|+.|++||+++.+.+..+. . ...+.++. |+|+ + .+++++.|+.|++||++. +.
T Consensus 231 ~--s~s~Dg~i~iwd~~~~~~~~~~~--------~-----~~~v~~~~-~~~~---~--~~~~~~~d~~i~iwd~~~-~~ 288 (340)
T 4aow_A 231 A--SGGKDGQAMLWDLNEGKHLYTLD--------G-----GDIINALC-FSPN---R--YWLCAATGPSIKIWDLEG-KI 288 (340)
T ss_dssp E--EEETTCEEEEEETTTTEEEEEEE--------C-----SSCEEEEE-ECSS---S--SEEEEEETTEEEEEETTT-TE
T ss_pred E--EEeCCCeEEEEEeccCceeeeec--------C-----CceEEeee-cCCC---C--ceeeccCCCEEEEEECCC-Ce
Confidence 3 67779999999999999888877 2 23577776 9987 3 466777899999999986 54
Q ss_pred ceEee---------ecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 244 PLTAM---------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 244 ~~~~~---------~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.+..+ .+|...|++++|+|++++|++|+.||.|+|||+++|++
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 289 IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred EEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 44433 46888999999999999999999999999999998863
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-33 Score=237.34 Aligned_cols=249 Identities=14% Similarity=0.177 Sum_probs=193.3
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC----CeEEEEEeccCCcccEEEEEEcccCC-CCeEEEeecCCeEEE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIG-LNKVISQGRDGTVKC 90 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~~~dg~v~i 90 (314)
.|...|++++|+|++++|++|+.||.|++||+.+ .+.+..+..|... |.+++|+| + +++|++++.|+.|++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSS--VKTVKFNA--KQDNVLASGGNNGEIFI 140 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSC--CCEEEECS--SSTTBEEEECSSSCEEB
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccc--eEEEEEcC--CCCCEEEEEcCCCeEEE
Confidence 5889999999999999999999999999999987 4578888888854 99999999 7 889999999999999
Q ss_pred EeCCCCC------CCCCC-eeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC-----CCC----c
Q 021291 91 WDIENGG------LSSNP-SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-----DSK----D 154 (314)
Q Consensus 91 wd~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~ 154 (314)
||+++++ ..... ....+........+++............+...+|++............ |.. +
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred EECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEE
Confidence 9999876 21100 111223344444454443344445556677888998877654433322 123 8
Q ss_pred eeccCCCceEEEeecCcC---eEEEEecCCC-ceeeeecccccCCCCCcCCCCCceeeeEEEecC-CCCCCceEEEEeec
Q 021291 155 DVPAEGPKYMAVAGEQLS---EVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAGYE 229 (314)
Q Consensus 155 ~~~~~~~~~~~~~g~~d~---~i~vwd~~~~-~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p-~~~~g~~~l~~g~~ 229 (314)
+|+|++..+++ +++.|+ .|++||++++ .....+.. +| ...+.++. |+| + +. +|++++.
T Consensus 221 ~~~~~~~~~l~-~~~~d~~~~~i~~~d~~~~~~~~~~~~~-------~~----~~~v~~~~-~s~~~---~~-~l~s~~~ 283 (416)
T 2pm9_A 221 EWHPKNSTRVA-TATGSDNDPSILIWDLRNANTPLQTLNQ-------GH----QKGILSLD-WCHQD---EH-LLLSSGR 283 (416)
T ss_dssp EECSSCTTEEE-EEECCSSSCCCCEEETTSTTSCSBCCCS-------CC----SSCEEEEE-ECSSC---SS-CEEEEES
T ss_pred EECCCCCCEEE-EEECCCCCceEEEEeCCCCCCCcEEeec-------Cc----cCceeEEE-eCCCC---CC-eEEEEeC
Confidence 99999876666 456677 9999999986 34433331 23 45788887 999 5 44 8999999
Q ss_pred CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCC-CeEEEecCCCcEEEEecCCCee
Q 021291 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
||.|++||+++ ++++..+.+|...|++++|+|++ .+|++++.||.|++|++...+.
T Consensus 284 dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 284 DNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999999998 88999999999999999999998 8999999999999999987763
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.6e-33 Score=232.39 Aligned_cols=266 Identities=12% Similarity=0.104 Sum_probs=196.4
Q ss_pred CCCceEEecCCCCceeEEEEccCC-CEEEEecCCCeEEEEeCCCCeEEEEEe--ccCCcccEEEEEEcccCCCCeEEEee
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSW--VHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
+.+..+.+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.+++....+. +|. ..|.+++|+|. ++++|++++
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~~~~-~~~~l~s~~ 138 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPG--DAITGMKFNQF-NTNQLFVSS 138 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTT--CBEEEEEEETT-EEEEEEEEE
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcC--CceeEEEeCCC-CCCEEEEEe
Confidence 446788999999999999999998 999999999999999999888877776 466 55999999993 358999999
Q ss_pred cCCeEEEEeCCCCCCCCCCeeeeec-----ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----c
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTIKT-----NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----D 154 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 154 (314)
.|+.|++||+++... ..+.. .......+++... ........+...+|++.. .....+.+|.. +
T Consensus 139 ~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~--~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 139 IRGATTLRDFSGSVI-----QVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG--HEIFKEKLHKAKVTHA 210 (383)
T ss_dssp TTTEEEEEETTSCEE-----EEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS--CEEEEEECSSSCEEEE
T ss_pred CCCEEEEEECCCCce-----EEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC--CEEEEeccCCCcEEEE
Confidence 999999999986432 12221 2233344443322 223334446677777742 23334445555 8
Q ss_pred eeccCCCceEEEeecCcCeEEEEecCC----CceeeeecccccCCCCCcCCCCCceeeeEEEecC-CCCCCceEEEEeec
Q 021291 155 DVPAEGPKYMAVAGEQLSEVEIWDLNT----AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAGYE 229 (314)
Q Consensus 155 ~~~~~~~~~~~~~g~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p-~~~~g~~~l~~g~~ 229 (314)
+|+|+++.+++ +++.|+.|++||+++ +..+..+. | ...+.++. |+| + +. +|++++.
T Consensus 211 ~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~---------~----~~~v~~~~-~s~~~---~~-~l~~~~~ 271 (383)
T 3ei3_B 211 EFNPRCDWLMA-TSSVDATVKLWDLRNIKDKNSYIAEMP---------H----EKPVNAAY-FNPTD---ST-KLLTTDQ 271 (383)
T ss_dssp EECSSCTTEEE-EEETTSEEEEEEGGGCCSTTCEEEEEE---------C----SSCEEEEE-ECTTT---SC-EEEEEES
T ss_pred EECCCCCCEEE-EEeCCCEEEEEeCCCCCcccceEEEec---------C----CCceEEEE-EcCCC---CC-EEEEEcC
Confidence 99999986665 566799999999997 44444443 3 55788888 999 7 44 8999999
Q ss_pred CCcEEEEEccCCCCceEeeecCC-----------------cceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEeeee
Q 021291 230 DGSILVWDIRNPGIPLTAMKVHL-----------------EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFGIG 292 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 292 (314)
|+.|++||+++ +.....+.+|. ..+..++|+|++++ +++.||.|++||+.+++.+..+.+
T Consensus 272 d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 272 RNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 99999999998 66666666553 34555777888876 889999999999999988766432
Q ss_pred ---------eeecCCCceecee
Q 021291 293 ---------FVCDQEGNKFGTT 305 (314)
Q Consensus 293 ---------~~~~~~~~~~~~~ 305 (314)
++++|++..+++.
T Consensus 349 ~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 349 PNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp TTBCSCCCEEEECTTSSEEEEE
T ss_pred CCCCceEEEEEEecCccEEEEe
Confidence 2577777776553
No 52
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-33 Score=243.55 Aligned_cols=240 Identities=18% Similarity=0.292 Sum_probs=187.3
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
.+.+..+.+|...|.+++|+|++++|++|+.||.|++||. +++.+..+..|... |.+++|+| ++++|++++.|+.
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~--v~~~~~s~--dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS--VRGVAFSP--DGQTIASASDDKT 408 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSC--EEEEEECT--TSSCEEEEETTSE
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCC--eEEEEECC--CCCEEEEEeCCCE
Confidence 4567788999999999999999999999999999999995 57888889999855 99999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCce
Q 021291 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (314)
|++||... +... .+..+........+++.... .......+...+|+... .....+.+|.. ++|+|+++.+
T Consensus 409 v~~~~~~~-~~~~--~~~~~~~~v~~~~~s~d~~~-l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 409 VKLWNRNG-QLLQ--TLTGHSSSVWGVAFSPDDQT-IASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp EEEECTTC-CEEE--EEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEE
T ss_pred EEEEeCCC-CEEE--EecCCCCCeEEEEECCCCCE-EEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 99999643 3222 22223333333344433222 12223334556666533 23334455555 8999999754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+ +++.|+.|++||. +++.+..+. +| ...+.+++ |+|+ |+ +|++++.||.|++||.. ++
T Consensus 483 a--s~~~d~~i~iw~~-~~~~~~~~~--------~h----~~~v~~l~-~s~d---g~-~l~s~~~dg~v~lwd~~--~~ 540 (577)
T 2ymu_A 483 A--SASDDKTVKLWNR-NGQLLQTLT--------GH----SSSVRGVA-FSPD---GQ-TIASASDDKTVKLWNRN--GQ 540 (577)
T ss_dssp E--EEETTSEEEEEET-TSCEEEEEE--------CC----SSCEEEEE-ECTT---SS-CEEEEETTSEEEEECTT--SC
T ss_pred E--EEeCCCEEEEEcC-CCCEEEEEe--------CC----CCCEEEEE-EcCC---CC-EEEEEECcCEEEEEeCC--CC
Confidence 3 5667999999995 677888887 67 44688887 9998 55 89999999999999964 78
Q ss_pred ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
++..+.+|.+.|++++|+|++++|+|++.|+.|++||
T Consensus 541 ~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 541 LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 8999999999999999999999999999999999997
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-32 Score=229.36 Aligned_cols=253 Identities=12% Similarity=0.144 Sum_probs=191.1
Q ss_pred CCceEEecC-CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 8 PDPVAVLRG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 8 ~~~~~~l~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
++....+.. |...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|... |.+++|++ +.|++++.||
T Consensus 123 ~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~----~~l~~~~~dg 196 (401)
T 4aez_A 123 GSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQAR--VGCLSWNR----HVLSSGSRSG 196 (401)
T ss_dssp CCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEEET----TEEEEEETTS
T ss_pred CcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCc--eEEEEECC----CEEEEEcCCC
Confidence 455555555 8999999999999999999999999999999999999999988854 99999965 7999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeee--cceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCC
Q 021291 87 TVKCWDIENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEG 160 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 160 (314)
.|++||++..... ...+. ........+++.. .........+...+|++........ +..|.. ++|+|++
T Consensus 197 ~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 197 AIHHHDVRIANHQ---IGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFT-KTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp EEEEEETTSSSCE---EEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEE-ECCCSSCCCEEEECTTS
T ss_pred CEEEEecccCcce---eeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEE-ecCCcceEEEEEECCCC
Confidence 9999999854321 22333 3333333444322 2233344456788888887655443 333433 9999999
Q ss_pred CceEEEe-ecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE--eecCCcEEEEE
Q 021291 161 PKYMAVA-GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSILVWD 237 (314)
Q Consensus 161 ~~~~~~~-g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg~i~vwd 237 (314)
..+++++ |+.|+.|++||+++++.+..+.. ...+.++. |+|+ ++ ++++ |+.||.|++||
T Consensus 272 ~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-------------~~~v~~~~-~s~~---~~-~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHFWNAATGARVNTVDA-------------GSQVTSLI-WSPH---SK-EIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp TTEEEEECCTTTCEEEEEETTTCCEEEEEEC-------------SSCEEEEE-ECSS---SS-EEEEEECTTTCEEEEEE
T ss_pred CCEEEEecCCCCCEEEEEECCCCCEEEEEeC-------------CCcEEEEE-ECCC---CC-eEEEEeecCCCcEEEEe
Confidence 8887754 34799999999999998888762 34688887 9998 54 6776 55899999999
Q ss_pred ccCCCCce--EeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 238 IRNPGIPL--TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 238 ~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+.+ +... ..+.+|...|.+++|+|++.+|++++.||.|++|++.+++.+...
T Consensus 334 ~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 334 YSS-SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EET-TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred cCC-ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 997 4433 346799999999999999999999999999999999999877654
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.7e-32 Score=238.65 Aligned_cols=265 Identities=17% Similarity=0.262 Sum_probs=200.7
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++.+..+.+|...|.+++|+|++++|++++.||.|++||.. ++.+..+..|... |.+++|+| ++++|++++.|+
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~--v~~~~~s~--~g~~l~~~~~dg 366 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSS--VWGVAFSP--DGQTIASASDDK 366 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTS
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCC--EEEEEECC--CCCEEEEEeCCC
Confidence 457788899999999999999999999999999999999976 4566778888744 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCc
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (314)
.|++||... +... .+..+........+++.+... ..........+|+... .....+.+|.. ++|+|+++.
T Consensus 367 ~v~~~~~~~-~~~~--~~~~~~~~v~~~~~s~dg~~l-~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 367 TVKLWNRNG-QLLQ--TLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp EEEEEETTC-CEEE--EEECCSSCEEEEEECTTSSCE-EEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEEEEcCCC-CEEE--EecCCCCCeEEEEECCCCCEE-EEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCE
Confidence 999999643 3222 222233333444444333222 1222334455565432 23334455655 889999875
Q ss_pred eEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
++ +++.|+.|++||. +++.+..+. +| ...+.+++ |+|+ ++ +|++++.|+.|++||.. +
T Consensus 441 l~--~~~~d~~v~~w~~-~~~~~~~~~--------~~----~~~v~~~~-~spd---~~-~las~~~d~~i~iw~~~--~ 498 (577)
T 2ymu_A 441 IA--SASDDKTVKLWNR-NGQLLQTLT--------GH----SSSVRGVA-FSPD---GQ-TIASASDDKTVKLWNRN--G 498 (577)
T ss_dssp EE--EEETTSEEEEEET-TSCEEEEEE--------CC----SSCEEEEE-ECTT---SC-EEEEEETTSEEEEEETT--S
T ss_pred EE--EEcCCCEEEEEEC-CCCEEEEEc--------CC----CCCEEEEE-EcCC---CC-EEEEEeCCCEEEEEcCC--C
Confidence 44 5667999999996 566677776 56 44678887 9998 55 89999999999999964 7
Q ss_pred CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee-------eeeeecCCCceecee
Q 021291 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG-------IGFVCDQEGNKFGTT 305 (314)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 305 (314)
+++..+.+|...|++++|+|++++|++++.||.|++||.. ++.+... ..++++|+|..+.+.
T Consensus 499 ~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 8899999999999999999999999999999999999964 5555543 445678888877653
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-32 Score=245.42 Aligned_cols=248 Identities=19% Similarity=0.257 Sum_probs=187.4
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
...+.+.+|...|.+++|+|++++|++|+.||+|+|||+.+++.+..+.+|... |.+++|+| ++++|++++.|++|
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD--VLSVAFSL--DNRQIVSASRDRTI 496 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECT--TSSCEEEEETTSCE
T ss_pred cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC--EEEEEEeC--CCCEEEEEeCCCEE
Confidence 456789999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCC-CeeeeecceeeEEEeeeeec-cccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCc
Q 021291 89 KCWDIENGGLSSN-PSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (314)
Q Consensus 89 ~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (314)
++||+........ .....+........+++... .........+...+|++...... ..+.+|.. ++|+|+++.
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~-~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR-STLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSE
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE-EEEcCCCCCEEEEEEeCCCCE
Confidence 9999865421100 00011222233444444332 22344555677888888776543 34566766 899999874
Q ss_pred eEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
++ +|+.|+.|++||+++++.+..+. . ...+.++. |+|+ +. +++++ .++.|++||+++ +
T Consensus 576 l~--sg~~Dg~i~iwd~~~~~~~~~~~--------~-----~~~v~~~~-~sp~---~~-~l~~~-~~~~i~iwd~~~-~ 633 (694)
T 3dm0_A 576 CA--SGGKDGVVLLWDLAEGKKLYSLE--------A-----NSVIHALC-FSPN---RY-WLCAA-TEHGIKIWDLES-K 633 (694)
T ss_dssp EE--EEETTSBCEEEETTTTEEEECCB--------C-----SSCEEEEE-ECSS---SS-EEEEE-ETTEEEEEETTT-T
T ss_pred EE--EEeCCCeEEEEECCCCceEEEec--------C-----CCcEEEEE-EcCC---Cc-EEEEE-cCCCEEEEECCC-C
Confidence 43 67779999999999998887765 2 33577887 9998 44 55555 567799999997 6
Q ss_pred CceEeeecCC-------------------cceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 243 IPLTAMKVHL-------------------EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 243 ~~~~~~~~h~-------------------~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
..+..+..+. ..+++++|+|++++|++|+.||.|++|++..
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 634 SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 6666554321 2378999999999999999999999999863
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.5e-33 Score=234.91 Aligned_cols=260 Identities=13% Similarity=0.132 Sum_probs=194.6
Q ss_pred CceEEecCCCCceeEEEEccC----C---CEEEEecCCCeEEEEeCCCCeE-----EEEEeccCCc---ccEEEEEEc--
Q 021291 9 DPVAVLRGHRASVTDVCFHQT----K---PILFAGTTGGELRIWDTVQHRT-----VSSSWVHSAA---HGIVSVATG-- 71 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~----~---~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~---~~v~~~~~~-- 71 (314)
+++..+.+|...|.+++|+|+ + ++|++++.||.|++||+.+++. +..+..|... ..|.+++|+
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 478899999999999999999 9 9999999999999999998876 7888887311 459999999
Q ss_pred --ccCCCCe-EEEeecCCeEEEEeCCC------CCCCC-CCeeee---------ecceeeEEEeeeeeccccccccCCCC
Q 021291 72 --PSIGLNK-VISQGRDGTVKCWDIEN------GGLSS-NPSLTI---------KTNSYHFCKLSLVKEPYANAKQANEP 132 (314)
Q Consensus 72 --~~~~~~~-l~s~~~dg~v~iwd~~~------~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (314)
| +++. |++++.||.|++||+++ ++... .+...+ +........+++.. ........+.
T Consensus 133 ~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~ 208 (397)
T 1sq9_A 133 NDR--LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGT 208 (397)
T ss_dssp C------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSE
T ss_pred cCC--CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCc
Confidence 8 8899 99999999999999998 54432 111122 22233344444433 3334445566
Q ss_pred cceeeccCCceeeecCCC---C---CC----ceeccCCCceEEEeecCc---CeEEEEecCCCceeeeecccccC-----
Q 021291 133 KDCYEREVGETVDTDSLC---D---SK----DDVPAEGPKYMAVAGEQL---SEVEIWDLNTAERCTRLHQNSCG----- 194 (314)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~~~~~g~~d---~~i~vwd~~~~~~~~~~~~~~~~----- 194 (314)
..+|++........ +.. | .. ++|+|+++.++ +++.| +.|++||+++++.+..+......
T Consensus 209 i~i~d~~~~~~~~~-~~~~~~h~~~~~~i~~i~~~~~~~~l~--~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 285 (397)
T 1sq9_A 209 VQISELSTLRPLYN-FESQHSMINNSNSIRSVKFSPQGSLLA--IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASL 285 (397)
T ss_dssp EEEEETTTTEEEEE-EECCC---CCCCCEEEEEECSSTTEEE--EEEEETTEEEEEEEETTTCCEEEEECBC--------
T ss_pred EEEEECCCCceeEE-EeccccccccCCccceEEECCCCCEEE--EEecCCCCceEEEEECCCCcccceeccCcccccccc
Confidence 77888877654433 333 4 33 89999987544 56668 99999999999988887720000
Q ss_pred CCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee------cC---------------Cc
Q 021291 195 GSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK------VH---------------LE 253 (314)
Q Consensus 195 ~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~------~h---------------~~ 253 (314)
....| ...+.++. |+|+ ++ +|++++.||.|++||+++ ++++..+. +| ..
T Consensus 286 ~~~~~----~~~v~~~~-~~~~---~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 286 GEFAH----SSWVMSLS-FNDS---GE-TLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp CCBSB----SSCEEEEE-ECSS---SS-EEEEEETTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred ccccc----CCcEEEEE-ECCC---CC-EEEEEeCCCeEEEEEcCC-CceeEEEecccCcccchhhhhccccccccccCC
Confidence 00004 45788887 9998 55 899999999999999998 88889998 88 99
Q ss_pred ceEEEEEeCCC----------CeEEEecCCCcEEEEecCCCe
Q 021291 254 PVLCLSIDESC----------NGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 254 ~v~~~~~~~~~----------~~l~s~s~dg~i~iw~~~~~~ 285 (314)
+|++++|+|++ .+|++++.||.|++|++++++
T Consensus 356 ~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 356 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999999998 799999999999999998764
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=239.91 Aligned_cols=253 Identities=14% Similarity=0.170 Sum_probs=184.3
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe-----------EEEEEeccCCc----------ccEEEEEEcccCC
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-----------TVSSSWVHSAA----------HGIVSVATGPSIG 75 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~----------~~v~~~~~~~~~~ 75 (314)
|.+.|++++|+|+|++||+|+.||.|+|||+.+++ ....+.+|... ..|.+++|+| +
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~--~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP--Q 104 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC--C
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC--C
Confidence 67899999999999999999999999999998776 57788888722 3499999999 7
Q ss_pred C--CeEEEeecCCeEEEEeCCCCCCCC----------------------CCe----------------eeeecceeeEEE
Q 021291 76 L--NKVISQGRDGTVKCWDIENGGLSS----------------------NPS----------------LTIKTNSYHFCK 115 (314)
Q Consensus 76 ~--~~l~s~~~dg~v~iwd~~~~~~~~----------------------~~~----------------~~~~~~~~~~~~ 115 (314)
+ ..|++++.|++|++||+.++.... .+. ...+........
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 6 789999999999999987633210 000 011222333344
Q ss_pred eeeeeccccccccCCCCcceeeccCCceeee-------cCCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCce
Q 021291 116 LSLVKEPYANAKQANEPKDCYEREVGETVDT-------DSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER 184 (314)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~ 184 (314)
+++....... . ..+...+|++........ .+.+|.. ++|+|++..+++ +|+.|+.|++||+++++.
T Consensus 185 ~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFV-YSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEE-EEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEE-EEeCCCeEEEEECcCCcc
Confidence 4443322222 2 466777888874332222 2445655 899999845555 567799999999998886
Q ss_pred ----eeeecccccCCCCCcCCC--------CCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCC
Q 021291 185 ----CTRLHQNSCGGSPNFSSK--------GRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL 252 (314)
Q Consensus 185 ----~~~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~ 252 (314)
...+. +|... ....+.++. |+|+ |+ +|++++. +.|++||+++.++++..+.+|.
T Consensus 262 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~-~s~~---g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 262 CDRHSKLFE--------EPEDPSNRSFFSEIISSISDVK-FSHS---GR-YMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp SCTTCEEEC--------CC-----CCHHHHHTTCEEEEE-ECTT---SS-EEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred ccceeeEec--------cCCCccccccccccCceEEEEE-ECCC---CC-EEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 56666 44210 012688887 9998 55 8889988 9999999997678888898886
Q ss_pred cc---------------eEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 253 EP---------------VLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 253 ~~---------------v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
.. +..++|+|++.+|++|+.||.|++||+.+++.+.
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 42 3349999999999999999999999999887654
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-34 Score=238.55 Aligned_cols=230 Identities=11% Similarity=0.136 Sum_probs=169.5
Q ss_pred EecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC--eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
.++.|.++|++++|+|++++|++|+.||.|+|||+.++ +.+..+.+|... |.+++|+| ++++|++++.|++|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKI--VTCVDWAP--KSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSC--EEEEEECT--TTCCEEEEETTSSEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCce--EEEEEEeC--CCCEEEEEeCCCeEEE
Confidence 45557889999999999999999999999999999988 677788888844 99999999 9999999999999999
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (314)
||+.+++... +...+..+...... ++|+|+++.++ +++.
T Consensus 82 wd~~~~~~~~-~~~~~~~~~~~v~~--------------------------------------~~~~~~~~~l~--~~~~ 120 (377)
T 3dwl_C 82 YEKRPDGTWK-QTLVLLRLNRAATF--------------------------------------VRWSPNEDKFA--VGSG 120 (377)
T ss_dssp C------CCC-CEEECCCCSSCEEE--------------------------------------EECCTTSSCCE--EEES
T ss_pred EEcCCCCcee-eeeEecccCCceEE--------------------------------------EEECCCCCEEE--EEec
Confidence 9999876111 12222211111110 56889887655 5667
Q ss_pred cCeEEEEecCCCce---eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC------
Q 021291 171 LSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP------ 241 (314)
Q Consensus 171 d~~i~vwd~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~------ 241 (314)
|+.|++||+++++. ...+.. .| ...+.++. |+|+ ++ +|++++.|+.|++||++..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~-------~h----~~~v~~~~-~~~~---~~-~l~~~~~d~~i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKR-------PL----RSTILSLD-WHPN---NV-LLAAGCADRKAYVLSAYVRDVDAKP 184 (377)
T ss_dssp SSCEEECCC-----CCCCEEECS-------SC----CSCEEEEE-ECTT---SS-EEEEEESSSCEEEEEECCSSCC-CC
T ss_pred CCeEEEEEECCcccceeeeEeec-------cc----CCCeEEEE-EcCC---CC-EEEEEeCCCEEEEEEEEecccCCCc
Confidence 99999999998773 555551 15 55788888 9998 44 8999999999999998521
Q ss_pred -----------CCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee----eEe-------eeeeeecCCC
Q 021291 242 -----------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY----VLF-------GIGFVCDQEG 299 (314)
Q Consensus 242 -----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~----~~~-------~~~~~~~~~~ 299 (314)
++++..+ +|...|++++|+|++++|++++.||.|++||+.+++. +.. +..++++|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 263 (377)
T 3dwl_C 185 EASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES 263 (377)
T ss_dssp CSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT
T ss_pred cccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC
Confidence 3455556 8999999999999999999999999999999998876 332 3445566777
Q ss_pred ceece
Q 021291 300 NKFGT 304 (314)
Q Consensus 300 ~~~~~ 304 (314)
..+++
T Consensus 264 ~~l~~ 268 (377)
T 3dwl_C 264 AIVAA 268 (377)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 66554
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.4e-33 Score=229.64 Aligned_cols=243 Identities=13% Similarity=0.117 Sum_probs=190.2
Q ss_pred EecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
.+..|.++|++++|+|++++|++|+.||.|++||+.+++ .+..+..|... |.+++|+| ++++|++++.||.|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ--VTGVDWAP--DSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSC--EEEEEEET--TTTEEEEEETTSCEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCc--ccEEEEeC--CCCEEEEEcCCCeEEE
Confidence 355699999999999999999999999999999999887 88888888854 99999999 9999999999999999
Q ss_pred EeCCCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCCce---eeecCCCCCC----ceeccCCC
Q 021291 91 WDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET---VDTDSLCDSK----DDVPAEGP 161 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~ 161 (314)
||+++++... .... +........+++... ........+...+|++..... .......|.. ++|+|+++
T Consensus 79 wd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 79 WTLKGRTWKP--TLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEEETTEEEE--EEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred EECCCCeeee--eEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 9998875322 2221 222333344443321 222334456677788876652 3333455555 89999987
Q ss_pred ceEEEeecCcCeEEEEecC------------------CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceE
Q 021291 162 KYMAVAGEQLSEVEIWDLN------------------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~------------------~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~ 223 (314)
.++ +++.|+.|++||++ .++.+..+. +| ...+.++. |+|+ +. +
T Consensus 156 ~l~--~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~ 216 (372)
T 1k8k_C 156 LLA--AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------SS----CGWVHGVC-FSAN---GS-R 216 (372)
T ss_dssp EEE--EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------CC----SSCEEEEE-ECSS---SS-E
T ss_pred EEE--EEcCCCCEEEEEcccccccccccccccccccchhhheEecC--------CC----CCeEEEEE-ECCC---CC-E
Confidence 544 56679999999964 456666665 44 45788887 9998 44 8
Q ss_pred EEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 224 l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
|++++.|+.|++||+++ ++++..+..|..+|.+++|+|++.+|+++ .|+.|++|+++.
T Consensus 217 l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999999998 88999999999999999999999988887 899999999988
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=237.43 Aligned_cols=261 Identities=13% Similarity=0.155 Sum_probs=190.3
Q ss_pred CCCCceEEe-cCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCC---Ce---EEEEEeccCCcccEEEEEEcccCCCC
Q 021291 6 PPPDPVAVL-RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQ---HR---TVSSSWVHSAAHGIVSVATGPSIGLN 77 (314)
Q Consensus 6 ~~~~~~~~l-~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~---~~---~~~~~~~~~~~~~v~~~~~~~~~~~~ 77 (314)
+.++++..+ ++|.+.|++++|+| ++++|++|+.||+|+|||+.+ +. ....+ .|. ..|.+++|+| +++
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~--~~v~~~~~~~--~~~ 124 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCS--STVTQITMIP--NFD 124 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECS--SCEEEEEECT--TSS
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCC--CCEEEEEEeC--CCC
Confidence 456788889 99999999999999 999999999999999999876 33 23333 366 4599999999 999
Q ss_pred eEEEeecCCeEEEEeCC---CCCCCCCCeeeeecceeeEEEeee------------ee---ccccccccCCCCcceeecc
Q 021291 78 KVISQGRDGTVKCWDIE---NGGLSSNPSLTIKTNSYHFCKLSL------------VK---EPYANAKQANEPKDCYERE 139 (314)
Q Consensus 78 ~l~s~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~~~~~~ 139 (314)
+|++++.||+|++||++ +++... ...........+.. .. ..........+...+|+++
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVK----FLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEE----EEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCEEEEEEeccccCCceee----ccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999995 443321 11111111111111 11 1222334445667788887
Q ss_pred CCceeeecCCC-CCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEec
Q 021291 140 VGETVDTDSLC-DSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 214 (314)
Q Consensus 140 ~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 214 (314)
........... |.. ++|+|+++.++ +|+.||.|++||+++++.+..+.. +| ...+.++. |+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~-------~~----~~~v~~~~-~~ 266 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLI--LGTTRGIIDIWDIRFNVLIRSWSF-------GD----HAPITHVE-VC 266 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEE--EEETTSCEEEEETTTTEEEEEEBC-------TT----CEEEEEEE-EC
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEE--EEcCCCeEEEEEcCCccEEEEEec-------CC----CCceEEEE-ec
Confidence 76654433321 444 89999987544 677799999999999998887752 23 34677885 66
Q ss_pred CCCC-CCceEEEEeecCCcEEEEEccCCCCceEeeec--------------------------CCcceEEEEEeCCCCeE
Q 021291 215 PSKS-QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV--------------------------HLEPVLCLSIDESCNGG 267 (314)
Q Consensus 215 p~~~-~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--------------------------h~~~v~~~~~~~~~~~l 267 (314)
|.-. ++. +|++|+.||.|++||+++ ++++..+.+ |...|++++|+ ++.+|
T Consensus 267 ~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l 343 (437)
T 3gre_A 267 QFYGKNSV-IVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL 343 (437)
T ss_dssp TTTCTTEE-EEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE
T ss_pred cccCCCcc-EEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE
Confidence 6422 244 899999999999999997 666666553 55678899999 77899
Q ss_pred EEecCCCcEEEEecCCCeeeEeeee
Q 021291 268 ISGGADQKIVLYNLDHSTYVLFGIG 292 (314)
Q Consensus 268 ~s~s~dg~i~iw~~~~~~~~~~~~~ 292 (314)
++|+.||.|++||+.+++.+..+.+
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred EecCCCCeEEEEECCCcccceEEec
Confidence 9999999999999999987766544
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-34 Score=239.46 Aligned_cols=252 Identities=15% Similarity=0.151 Sum_probs=193.0
Q ss_pred CCceEEecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCCCe------EEEE---EeccCCcccEEEEEEcccCC-C
Q 021291 8 PDPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHR------TVSS---SWVHSAAHGIVSVATGPSIG-L 76 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~------~~~~---~~~~~~~~~v~~~~~~~~~~-~ 76 (314)
.+.+..+.+|...|++++|+|+ +++|++++.||.|++||+.+++ .... +..|. ..|.+++|+| + +
T Consensus 103 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~ 178 (416)
T 2pm9_A 103 INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV--DEVISLAWNQ--SLA 178 (416)
T ss_dssp CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS--CCCCEEEECS--SCT
T ss_pred ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC--CCeeEEEeCC--CCC
Confidence 3588899999999999999998 8999999999999999998876 3322 24566 4599999999 7 7
Q ss_pred CeEEEeecCCeEEEEeCCCCCCCCCCeeeee------cceeeEEEeeeeeccccccccCCC---CcceeeccCCceeeec
Q 021291 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIK------TNSYHFCKLSLVKEPYANAKQANE---PKDCYEREVGETVDTD 147 (314)
Q Consensus 77 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 147 (314)
.+|++++.||.|++||+++++... .+... ........+++............+ ...+|+++........
T Consensus 179 ~~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~ 256 (416)
T 2pm9_A 179 HVFASAGSSNFASIWDLKAKKEVI--HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT 256 (416)
T ss_dssp TEEEEESSSSCEEEEETTTTEEEE--EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC
T ss_pred cEEEEEcCCCCEEEEECCCCCcce--EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE
Confidence 899999999999999999876533 22222 233444455544433344444444 7888999887555555
Q ss_pred CC-CCCC----ceecc-CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCc
Q 021291 148 SL-CDSK----DDVPA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (314)
Q Consensus 148 ~~-~~~~----~~~~~-~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~ 221 (314)
+. +|.. ++|+| +++ +++ +++.|+.|++||+++++.+..+. +|. ..+.++. |+|+++ .
T Consensus 257 ~~~~~~~~v~~~~~s~~~~~-~l~-s~~~dg~v~~wd~~~~~~~~~~~--------~~~----~~v~~~~-~s~~~~--~ 319 (416)
T 2pm9_A 257 LNQGHQKGILSLDWCHQDEH-LLL-SSGRDNTVLLWNPESAEQLSQFP--------ARG----NWCFKTK-FAPEAP--D 319 (416)
T ss_dssp CCSCCSSCEEEEEECSSCSS-CEE-EEESSSEEEEECSSSCCEEEEEE--------CSS----SCCCCEE-ECTTCT--T
T ss_pred eecCccCceeEEEeCCCCCC-eEE-EEeCCCCEEEeeCCCCccceeec--------CCC----CceEEEE-ECCCCC--C
Confidence 65 6666 89999 665 444 56679999999999999988888 663 4677777 999831 3
Q ss_pred eEEEEeecCCcEEEEEccCCCCceEee-----------------------------------ecCCcceEEEEEeCCCCe
Q 021291 222 VNVLAGYEDGSILVWDIRNPGIPLTAM-----------------------------------KVHLEPVLCLSIDESCNG 266 (314)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~~~~~~~-----------------------------------~~h~~~v~~~~~~~~~~~ 266 (314)
+|++++.|+.|++||+.... ..... ..|..++.+++|+|+|++
T Consensus 320 -~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 397 (416)
T 2pm9_A 320 -LFACASFDNKIEVQTLQNLT-NTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKL 397 (416)
T ss_dssp -EEEECCSSSEEEEEESCCCC-CSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEE
T ss_pred -EEEEEecCCcEEEEEccCCC-CCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeE
Confidence 89999999999999998633 22111 116778889999999999
Q ss_pred EEEecCCCcEEEEecCCC
Q 021291 267 GISGGADQKIVLYNLDHS 284 (314)
Q Consensus 267 l~s~s~dg~i~iw~~~~~ 284 (314)
|++++.||.|+||++.++
T Consensus 398 la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 398 VQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ECBCTTSSCBCCBCCCCC
T ss_pred EEEeCCCCeEEEEEeccC
Confidence 999999999999999875
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=221.69 Aligned_cols=255 Identities=13% Similarity=0.142 Sum_probs=200.9
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD- 85 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d- 85 (314)
.++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+. +. ..|.+++|+| ++++|++++.+
T Consensus 63 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~--~~v~~~~~~~--~~~~l~~~~~~~ 137 (369)
T 3zwl_B 63 NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SP--VPVKRVEFSP--CGNYFLAILDNV 137 (369)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CS--SCEEEEEECT--TSSEEEEEECCB
T ss_pred CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cC--CCeEEEEEcc--CCCEEEEecCCc
Confidence 457889999999999999999999999999999999999999999998887 55 4599999999 99999999998
Q ss_pred ----CeEEEEeCCCCCCCCCC-------eeeeecc----eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC
Q 021291 86 ----GTVKCWDIENGGLSSNP-------SLTIKTN----SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (314)
Q Consensus 86 ----g~v~iwd~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (314)
+.|++||+......... ....... ......+++... ........+...+|++.........+..
T Consensus 138 ~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 138 MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence 99999999877543310 1111111 222333333222 2223344466778888875555555555
Q ss_pred CCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 151 DSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 151 ~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
|.. ++|+|+++.++ +++.|+.|++||+++++.+..+.. ...+..+. |+|+ ++ ++++
T Consensus 217 ~~~~v~~~~~~~~~~~l~--~~~~d~~i~v~d~~~~~~~~~~~~-------------~~~~~~~~-~~~~---~~-~l~~ 276 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFI--TSSRDTNSFLVDVSTLQVLKKYET-------------DCPLNTAV-ITPL---KE-FIIL 276 (369)
T ss_dssp CSSCEEEEEECTTSSEEE--EEETTSEEEEEETTTCCEEEEEEC-------------SSCEEEEE-ECSS---SS-EEEE
T ss_pred CCCceeEEEECCCCCEEE--EecCCceEEEEECCCCceeeeecC-------------CCCceeEE-ecCC---Cc-eEEE
Confidence 555 89999987554 566789999999999998887762 44677787 9998 55 8888
Q ss_pred eecCC--------------cEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 227 GYEDG--------------SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 227 g~~dg--------------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
++.++ .+++||..+ ++++..+.+|...|++++|+|++++|++++.||.|++|+++.+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp EECCC-------------CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTC
T ss_pred eecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchh
Confidence 88888 899999998 88999999999999999999999999999999999999998765443
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.6e-32 Score=228.45 Aligned_cols=235 Identities=18% Similarity=0.271 Sum_probs=178.3
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++++..+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|... |.+++|+| ++++|++++.|+
T Consensus 128 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~d~ 203 (420)
T 3vl1_A 128 FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT--VTDIAIID--RGRNVLSASLDG 203 (420)
T ss_dssp SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC--EEEEEEET--TTTEEEEEETTS
T ss_pred CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc--EEEEEEcC--CCCEEEEEcCCC
Confidence 34567777899999999999999999999999999999999999999999999855 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeee---cceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCce
Q 021291 87 TVKCWDIENGGLSSNPSLTIK---TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (314)
+|++||+++++... .+... ........+.+..... .... .......++|+|+++.+
T Consensus 204 ~v~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~-----------~~~~--------~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 204 TIRLWECGTGTTIH--TFNRKENPHDGVNSIALFVGTDRQ-----------LHEI--------STSKKNNLEFGTYGKYV 262 (420)
T ss_dssp CEEEEETTTTEEEE--EECBTTBTTCCEEEEEEEECCCSS-----------CGGG--------CCCCCCTTCSSCTTEEE
T ss_pred cEEEeECCCCceeE--EeecCCCCCCCccEEEEecCCcce-----------eeec--------ccCcccceEEcCCCCEE
Confidence 99999999886533 11111 1111222221111000 0000 00011117899998754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+ +|+.||.|++||+++++.+..+.. +| ...+.++. |+|+ +..+|++|+.||.|++||+++...
T Consensus 263 ~--~~~~dg~i~i~d~~~~~~~~~~~~-------~~----~~~v~~~~-~~~~---~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 263 I--AGHVSGVITVHNVFSKEQTIQLPS-------KF----TCSCNSLT-VDGN---NANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp E--EEETTSCEEEEETTTCCEEEEECC-------TT----SSCEEEEE-ECSS---CTTEEEEEETTSEEEEEETTCTTS
T ss_pred E--EEcCCCeEEEEECCCCceeEEccc-------cc----CCCceeEE-EeCC---CCCEEEEEeCCCeEEEEEcCCCcC
Confidence 4 567799999999999988777753 34 45788887 9998 333899999999999999998556
Q ss_pred ceEeeec-CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 244 PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 244 ~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
++..+.+ |...|.++.+. ++.+|++++.||.|++|++..+
T Consensus 326 ~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp CSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCT
T ss_pred chhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCC
Confidence 6788887 66788888655 6779999999999999998874
No 64
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.2e-33 Score=229.42 Aligned_cols=202 Identities=10% Similarity=0.011 Sum_probs=153.6
Q ss_pred CCCceeEEEEccCCCEEE--EecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCC
Q 021291 17 HRASVTDVCFHQTKPILF--AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 94 (314)
+...+.+++|+|||++|+ +++.|++|+|||+++++++..+. |.. .|.+++|+| ++++|++++.+ .+++|+..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~--~V~~v~fsp--dg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRG--EVKDLHFST--DGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSS--CCCEEEECT--TSSEEEEECSS-CEEEEETT
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCC--ceEEEEEcc--CCceEEeccce-eEEEEEec
Confidence 445688999999999876 45579999999999999998886 553 499999999 99999999855 56677766
Q ss_pred CCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcC--
Q 021291 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS-- 172 (314)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~-- 172 (314)
+++... ......+..... . ++|+|+++.++. ++.|+
T Consensus 206 ~~~~~~--~~~~~~~~~~v~--~------------------------------------v~fspdg~~l~~--~s~d~~~ 243 (365)
T 4h5i_A 206 TGSCIA--RKTDFDKNWSLS--K------------------------------------INFIADDTVLIA--ASLKKGK 243 (365)
T ss_dssp TCCEEE--EECCCCTTEEEE--E------------------------------------EEEEETTEEEEE--EEESSSC
T ss_pred cCccee--eeecCCCCCCEE--E------------------------------------EEEcCCCCEEEE--EecCCcc
Confidence 664321 001111111100 0 568999876654 33344
Q ss_pred --eEEEEecCCCcee----eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceE
Q 021291 173 --EVEIWDLNTAERC----TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (314)
Q Consensus 173 --~i~vwd~~~~~~~----~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (314)
.+++||+...... ..+. +| ...+.+++ |+|+ |+ +|++|+.|+.|+|||+++ ++++.
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~--------~~----~~~V~~~~-~Spd---g~-~lasgs~D~~V~iwd~~~-~~~~~ 305 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVT--------NR----FKGITSMD-VDMK---GE-LAVLASNDNSIALVKLKD-LSMSK 305 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE--------SS----CSCEEEEE-ECTT---SC-EEEEEETTSCEEEEETTT-TEEEE
T ss_pred eeEEeecccccceecceeeeeec--------CC----CCCeEeEE-ECCC---CC-ceEEEcCCCEEEEEECCC-CcEEE
Confidence 6888998766532 2233 44 44688888 9998 55 999999999999999998 78887
Q ss_pred e-eecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 247 A-MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 247 ~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
. +.+|..+|++|+|+|+|++|+|||.|++|+||++...
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7 4799999999999999999999999999999999754
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=229.70 Aligned_cols=238 Identities=14% Similarity=0.211 Sum_probs=187.5
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
|.+.|++++|+|++++|++|+.||.|++|| .+++.+..+..|... |.+++|+| ++++|++++.|+.|++||+.++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAP--IVSVKWNK--DGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSC--EEEEEECT--TSSEEEEEETTCCEEEEETTTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCcc--EEEEEECC--CCCEEEEEecCCeEEEEECCCC
Confidence 788999999999999999999999999999 678888889888854 99999999 9999999999999999999987
Q ss_pred CCCCCCeeeeecce---------------eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 97 GLSSNPSLTIKTNS---------------YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 97 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
+... .+...... .....+. ...........+...+|++....... .+..|.. ++|+
T Consensus 182 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~i~~~d~~~~~~~~-~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 182 TVMQ--HFELKETGGSSINAENHSGDGSLGVDVEWV--DDDKFVIPGPKGAIFVYQITEKTPTG-KLIGHHGPISVLEFN 256 (425)
T ss_dssp EEEE--EECCC---------------CCCBSCCEEE--ETTEEEEECGGGCEEEEETTCSSCSE-EECCCSSCEEEEEEE
T ss_pred cEEE--EeeccccCccceeeccccCCcceeeEEEEc--CCCEEEEEcCCCeEEEEEcCCCceee-eeccCCCceEEEEEC
Confidence 6533 11111111 1111222 22223334444566777776654333 2334444 8999
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
|+++.++ +++.|+.|++||+++++....+. +| ...+.++. |+|+ + ++++++.|+.|++||
T Consensus 257 ~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~i~~~~-~~~~---~--~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 257 DTNKLLL--SASDDGTLRIWHGGNGNSQNCFY--------GH----SQSIVSAS-WVGD---D--KVISCSMDGSVRLWS 316 (425)
T ss_dssp TTTTEEE--EEETTSCEEEECSSSBSCSEEEC--------CC----SSCEEEEE-EETT---T--EEEEEETTSEEEEEE
T ss_pred CCCCEEE--EEcCCCEEEEEECCCCccceEec--------CC----CccEEEEE-ECCC---C--EEEEEeCCCcEEEEE
Confidence 9987444 56678999999999998888876 55 44678887 9997 4 799999999999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
+++ ++++..+..|...|.+++|+|++.+|++++.||.|++||+.+++
T Consensus 317 ~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 317 LKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTT-TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CCC-CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 998 88889999999999999999999999999999999999998877
No 66
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-31 Score=221.28 Aligned_cols=280 Identities=14% Similarity=0.183 Sum_probs=197.4
Q ss_pred CCCCCceEEecCCCCceeEEEEccC---CCEEEEecCCCeEEEEeCCC-CeEE-EEEeccCCcccEEEEEEcccCCCCeE
Q 021291 5 PPPPDPVAVLRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQ-HRTV-SSSWVHSAAHGIVSVATGPSIGLNKV 79 (314)
Q Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~~~~---~~~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l 79 (314)
..|.+.++.+++|.+.|++++|+|+ |++|++|+.||.|+|||+.+ ++.+ ..+.+|... |.+++|+| ++++|
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l 101 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGP--VLDVCWSD--DGSKV 101 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSC--EEEEEECT--TSSEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCC--EEEEEECc--CCCEE
Confidence 3566889999999999999999998 69999999999999999987 5554 778888854 99999999 99999
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeecc-ccccccCCCCcceeeccCCceeeecCCCCCC-ceec
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP-YANAKQANEPKDCYEREVGETVDTDSLCDSK-DDVP 157 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 157 (314)
++++.||.|++||+++++... ...+........+.+.... ........+...+|++........ +..+.. .++.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~ 177 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV-LQLPERCYCAD 177 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE-EECSSCEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE-EecCCCceEEE
Confidence 999999999999999886432 1222333333333212211 123334456677788776653332 222333 4455
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
+....+++ ++.++.+++||++.......... ........+.+ +.++.......+++++.||.|++||
T Consensus 178 ~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dg~i~i~~ 244 (368)
T 3mmy_A 178 VIYPMAVV--ATAERGLIVYQLENQPSEFRRIE--------SPLKHQHRCVA---IFKDKQNKPTGFALGSIEGRVAIHY 244 (368)
T ss_dssp EETTEEEE--EEGGGCEEEEECSSSCEEEEECC--------CSCSSCEEEEE---EEECTTSCEEEEEEEETTSEEEEEE
T ss_pred ecCCeeEE--EeCCCcEEEEEeccccchhhhcc--------ccccCCCceEE---EcccCCCCCCeEEEecCCCcEEEEe
Confidence 55554443 44479999999987655433321 11111223333 3333211112599999999999999
Q ss_pred ccCCC--CceEeeecCCc------------ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe-------eeeeeec
Q 021291 238 IRNPG--IPLTAMKVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF-------GIGFVCD 296 (314)
Q Consensus 238 ~~~~~--~~~~~~~~h~~------------~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-------~~~~~~~ 296 (314)
++... ..+..+.+|.. +|++++|+|++.+|++++.||.|++||+++++.+.. +..++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 324 (368)
T 3mmy_A 245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFN 324 (368)
T ss_dssp SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEEC
T ss_pred cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEEC
Confidence 99732 56777888876 799999999999999999999999999999988765 3456788
Q ss_pred CCCceecee
Q 021291 297 QEGNKFGTT 305 (314)
Q Consensus 297 ~~~~~~~~~ 305 (314)
|+|..+++.
T Consensus 325 ~~g~~l~~~ 333 (368)
T 3mmy_A 325 HNGNIFAYA 333 (368)
T ss_dssp TTSSCEEEE
T ss_pred CCCCeEEEE
Confidence 888777653
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=9.2e-32 Score=220.92 Aligned_cols=251 Identities=13% Similarity=0.078 Sum_probs=188.5
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe---EEEEEeccCCcccEEEEEEcccCCCC-eEEEeecCC
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDG 86 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg 86 (314)
+....+|.+.|++++|+|++++|++++.||.|+|||+.+++ ....+..|.. .|.+++|+| +++ +|++++.||
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~~l~~~~~dg 79 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH--PLLCCNFID--NTDLQIYVGTVQG 79 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS--CEEEEEEEE--SSSEEEEEEETTS
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCC--ceEEEEECC--CCCcEEEEEcCCC
Confidence 34556899999999999999999999999999999998776 3445557774 499999999 899 999999999
Q ss_pred eEEEEeC-CCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccC---------CceeeecCCCCCC-
Q 021291 87 TVKCWDI-ENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV---------GETVDTDSLCDSK- 153 (314)
Q Consensus 87 ~v~iwd~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~- 153 (314)
.|++||+ .+++.. .+.. +........+.+ ..........+...+|++.. .... ..+. |..
T Consensus 80 ~i~~wd~~~~~~~~---~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~-~~~~ 152 (342)
T 1yfq_A 80 EILKVDLIGSPSFQ---ALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS-NNTK-VKNK 152 (342)
T ss_dssp CEEEECSSSSSSEE---ECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-SSSS-SCCC
T ss_pred eEEEEEeccCCceE---eccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCee-eEEe-eCCc
Confidence 9999999 876531 2222 333344444444 33333444556677777764 3222 2222 333
Q ss_pred ---ceeccCCCceEEEeecCcCeEEEEecCC-Cceeee-ecccccCCCCCcCCCCCceeeeEEEecC-CCCCCceEEEEe
Q 021291 154 ---DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAG 227 (314)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~vwd~~~-~~~~~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~p-~~~~g~~~l~~g 227 (314)
++|++++ ++ +++.|+.|++||+++ +..... ... .| ...+.++. |+| + +. +++++
T Consensus 153 v~~~~~~~~~---l~-~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~----~~~i~~i~-~~~~~---~~-~l~~~ 212 (342)
T 1yfq_A 153 IFTMDTNSSR---LI-VGMNNSQVQWFRLPLCEDDNGTIEES-------GL----KYQIRDVA-LLPKE---QE-GYACS 212 (342)
T ss_dssp EEEEEECSSE---EE-EEESTTEEEEEESSCCTTCCCEEEEC-------SC----SSCEEEEE-ECSGG---GC-EEEEE
T ss_pred eEEEEecCCc---EE-EEeCCCeEEEEECCccccccceeeec-------CC----CCceeEEE-ECCCC---CC-EEEEE
Confidence 7788776 33 566689999999998 553222 221 23 44678887 999 7 44 89999
Q ss_pred ecCCcEEEEEccCC-----CCceEeeecCCc---------ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEeeee
Q 021291 228 YEDGSILVWDIRNP-----GIPLTAMKVHLE---------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFGIG 292 (314)
Q Consensus 228 ~~dg~i~vwd~~~~-----~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 292 (314)
+.||.|++|+++.. .++...+..|.. .|++++|+|++++|++++.||.|++||+.+++.+....+
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 99999999999884 278888888866 999999999999999999999999999999988776544
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5e-31 Score=225.54 Aligned_cols=254 Identities=15% Similarity=0.185 Sum_probs=195.8
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++++..+.+|.+.|++++|+|++ +|++|+.||+|++||+++++++..+.+|... |.+++|++..++.+|++++.||
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNST--VRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEEESSSCEEEEEEETTS
T ss_pred CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCc--cEEEEEecCCCCCEEEEEcCCC
Confidence 456788999999999999999988 9999999999999999999999999999855 9999999644778999999999
Q ss_pred eEEEEeCCCCCCCCCC-------------------eeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec
Q 021291 87 TVKCWDIENGGLSSNP-------------------SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD 147 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
+|++||++++...... ......+......++.. ..........+...+|++....... .
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~-~ 305 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLY-I 305 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEE-E
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEE-E
Confidence 9999999987643210 11111222222222222 2223344455677888887665443 3
Q ss_pred CCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceE
Q 021291 148 SLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (314)
Q Consensus 148 ~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~ 223 (314)
+.+|.. ++|+|+++.++ +|+.|+.|++||+++++.+..+. +| ...+.++. |++. +
T Consensus 306 ~~~~~~~v~~~~~~~~~~~l~--sg~~dg~i~vwd~~~~~~~~~~~--------~h----~~~v~~~~-~~~~------~ 364 (464)
T 3v7d_B 306 LSGHTDRIYSTIYDHERKRCI--SASMDTTIRIWDLENGELMYTLQ--------GH----TALVGLLR-LSDK------F 364 (464)
T ss_dssp ECCCSSCEEEEEEETTTTEEE--EEETTSCEEEEETTTTEEEEEEC--------CC----SSCEEEEE-ECSS------E
T ss_pred ecCCCCCEEEEEEcCCCCEEE--EEeCCCcEEEEECCCCcEEEEEe--------CC----CCcEEEEE-EcCC------E
Confidence 455555 88999987554 67779999999999999998887 66 44677777 8754 8
Q ss_pred EEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 224 l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
+++|+.||.|++||+++ ....... .|...+..++|++++.+|++++ ||.|++||+++++.+..
T Consensus 365 l~s~s~dg~v~vwd~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 365 LVSAAADGSIRGWDAND-YSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEETTSEEEEEETTT-CCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred EEEEeCCCcEEEEECCC-Cceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 99999999999999997 5444444 3677888899999999999998 89999999999988764
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.8e-32 Score=232.17 Aligned_cols=253 Identities=15% Similarity=0.173 Sum_probs=194.6
Q ss_pred eEEecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCC----------CeEEEEEeccCCcccEEEEEEcccCCCC-e
Q 021291 11 VAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ----------HRTVSSSWVHSAAHGIVSVATGPSIGLN-K 78 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~ 78 (314)
...+.+|.+.|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+.+|... |.+++|+| ++. +
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~l~~~~--~~~~~ 196 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE--GYGLSWNP--NLNGY 196 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSC--CCCEEECT--TSTTE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCC--eEEEEeCC--CCCCe
Confidence 3556789999999999997 78999999999999999986 5677888888854 99999999 777 9
Q ss_pred EEEeecCCeEEEEeCCCCCCCCC-----CeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc--eeeecCCCC
Q 021291 79 VISQGRDGTVKCWDIENGGLSSN-----PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE--TVDTDSLCD 151 (314)
Q Consensus 79 l~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 151 (314)
|++++.||+|++||+.++..... ..+..+........+++............+...+|+++... .....+..|
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 99999999999999987432110 01222333344444544333444455566778888887653 223333455
Q ss_pred CC----ceeccCCCceEEEeecCcCeEEEEecCC-CceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 152 SK----DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 152 ~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
.. ++|+|+++++++ +|+.||.|++||+++ ...+..+. +| ...+.++. |+|+ ++.+|++
T Consensus 277 ~~~v~~i~~~p~~~~~l~-tg~~dg~v~vwd~~~~~~~~~~~~--------~h----~~~v~~i~-~sp~---~~~~l~s 339 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILA-TGSADKTVALWDLRNLKLKLHSFE--------SH----KDEIFQVQ-WSPH---NETILAS 339 (430)
T ss_dssp SSCEEEEEECSSCTTEEE-EEETTSEEEEEETTCTTSCSEEEE--------CC----SSCEEEEE-ECSS---CTTEEEE
T ss_pred CCCeEEEEeCCCCCCEEE-EEeCCCeEEEEeCCCCCCCeEEee--------cC----CCCEEEEE-ECCC---CCCEEEE
Confidence 44 899999987776 566799999999998 45566666 55 45788888 9998 4338999
Q ss_pred eecCCcEEEEEccCCC-------------CceEeeecCCcceEEEEEeCCCC-eEEEecCCCcEEEEecCCC
Q 021291 227 GYEDGSILVWDIRNPG-------------IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 227 g~~dg~i~vwd~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~iw~~~~~ 284 (314)
++.|+.|++||++..+ +++..+.+|...|++++|+|++. +|++++.||.|++|++...
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999999999998622 56677789999999999999999 8999999999999998754
No 70
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.6e-32 Score=230.05 Aligned_cols=256 Identities=13% Similarity=0.124 Sum_probs=181.8
Q ss_pred CceEEecCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
..+..+.+|.+.|++|+|+| ++++|++|+.||+|+|||++++........+.....+.+++|+| ++.+|++|+.||.
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~g~~dg~ 232 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA--SSRMVVTGDNVGN 232 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET--TTTEEEEECSSSB
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC--CCCEEEEEeCCCc
Confidence 34556779999999999998 78999999999999999998765554444444445588999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceee--ecCCCCCC----ceeccCCC
Q 021291 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD--TDSLCDSK----DDVPAEGP 161 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~ 161 (314)
|++||++.... . .+..+........+++............+...+|+++...... ....+|.. ++|+|++.
T Consensus 233 i~~wd~~~~~~-~--~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~ 309 (435)
T 4e54_B 233 VILLNMDGKEL-W--NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 309 (435)
T ss_dssp EEEEESSSCBC-C--CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred EeeeccCccee-E--EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence 99999976532 2 2233444555555555444444445566778889887654332 23345655 88999997
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCC--ceeeeEEEecCCCCCCceEEEEe------------
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR--GMCMAVQAYLPSKSQGFVNVLAG------------ 227 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~p~~~~g~~~l~~g------------ 227 (314)
.++ +++.|+.|++||+++++....+. .|..... ....... |+|+ +. +++++
T Consensus 310 ~l~--s~~~D~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~---~~-~~~~~~~~d~~~~~~~~ 374 (435)
T 4e54_B 310 RLL--TTDQKSEIRVYSASQWDCPLGLI--------PHPHRHFQHLTPIKAA-WHPR---YN-LIVVGRYPDPNFKSCTP 374 (435)
T ss_dssp EEE--EEESSSCEEEEESSSSSSEEEEC--------CCCCCCCSSSCCCBCE-ECSS---SS-CEEEECCCCTTSCCSST
T ss_pred eeE--EEcCCCEEEEEECCCCccceEEe--------cccccccccceeEEEE-EcCC---CC-EEEEEEcCCCCeEEEEe
Confidence 554 67779999999999988877765 3332211 1222333 6665 22 33333
Q ss_pred ecCCcEEEEEccCCCCceEeee-cCCcceEEE-EEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 228 YEDGSILVWDIRNPGIPLTAMK-VHLEPVLCL-SIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 228 ~~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~-~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
..++.|++||..+ ++.+..+. +|...|.++ +|+|+|.+|++|+ |+.|+||++++++.
T Consensus 375 ~~~~~i~iwd~~~-g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 375 YELRTIDVFDGNS-GKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp TCCCCEEEECSSS-CCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred cCCCEEEEEECCC-CcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 3456899999998 77776654 788889887 6999999999886 78999999998864
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-32 Score=226.68 Aligned_cols=276 Identities=11% Similarity=0.081 Sum_probs=198.6
Q ss_pred EEecCCCCceeEEEEccC----CCEEEEecCCCeEEEEeCCCCeEEEEEeccC---CcccEEEEEEcccCC----CCeEE
Q 021291 12 AVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHS---AAHGIVSVATGPSIG----LNKVI 80 (314)
Q Consensus 12 ~~l~~h~~~v~~~~~~~~----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~----~~~l~ 80 (314)
....+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+..+. +...|.+++|+| + +.+|+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~l~ 89 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY--DSNTSHPLLA 89 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE--CTTTCCEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc--CCCCCCCEEE
Confidence 344589999999999984 4566777777799999999887777666543 225599999999 6 67999
Q ss_pred EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec--CCCCCC----c
Q 021291 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD--SLCDSK----D 154 (314)
Q Consensus 81 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~ 154 (314)
+++.||.|++||+.+++... .+..+........+++............+...+|++......... +..|.. +
T Consensus 90 ~~~~dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp EEETTCEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred EecCCCEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 99999999999999886543 233334444445555423333444555678889999877655443 245555 8
Q ss_pred eeccCCCceEEEeecCcCeEEEEecCCCceeeeeccccc--------------------CCCCCcCCCCCceeeeEEEec
Q 021291 155 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC--------------------GGSPNFSSKGRGMCMAVQAYL 214 (314)
Q Consensus 155 ~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~--------------------~~~~~h~~~~~~~~~~~~~~~ 214 (314)
+|+|+++.++ +++.|+.|++||+++++....+..... ....+| ...+.++. |+
T Consensus 168 ~~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~-~~ 240 (366)
T 3k26_A 168 DYDLLGEKIM--SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH----RNYVDCVR-WL 240 (366)
T ss_dssp EECTTSSEEE--EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC----SSCCCEEE-EE
T ss_pred EECCCCCEEE--EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC----cceEEEEE-Ec
Confidence 9999987554 566799999999998775543331000 000013 45677777 88
Q ss_pred CCCCCCceEEEEeecCCcEEEEEccCCC-------------CceEeeecCCcceEEEEEeCC--CCeEEEecCCCcEEEE
Q 021291 215 PSKSQGFVNVLAGYEDGSILVWDIRNPG-------------IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLY 279 (314)
Q Consensus 215 p~~~~g~~~l~~g~~dg~i~vwd~~~~~-------------~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~i~iw 279 (314)
++ ++++++.|+.|++||+++.. ..+..+.+|...|++++|+|+ +++|++++.||.|++|
T Consensus 241 ~~------~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 241 GD------LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp TT------EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred CC------EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 43 89999999999999998732 236778899999999999999 9999999999999999
Q ss_pred ecCCCeeeE----e---------eeeeeecCCCceece
Q 021291 280 NLDHSTYVL----F---------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 280 ~~~~~~~~~----~---------~~~~~~~~~~~~~~~ 304 (314)
|+++++... . +..+.+++++..+++
T Consensus 315 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 352 (366)
T 3k26_A 315 DLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA 352 (366)
T ss_dssp ECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE
Confidence 999875321 1 334566777766654
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-31 Score=222.46 Aligned_cols=269 Identities=15% Similarity=0.111 Sum_probs=198.2
Q ss_pred CCCceEEe--cCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEec-cCCcccEEEEEEcccCCCCeEEEee
Q 021291 7 PPDPVAVL--RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 7 ~~~~~~~l--~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
|..+.+.+ .+|...+.+.++++++..+++++.||.|++||+.+++....+.. |. ..|.+++|+| ++++|++++
T Consensus 78 ~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--~~v~~v~~s~--~~~~l~~~~ 153 (401)
T 4aez_A 78 NTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDES--TYVASVKWSH--DGSFLSVGL 153 (401)
T ss_dssp CCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTT--CCEEEEEECT--TSSEEEEEE
T ss_pred CCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCC--CCEEEEEECC--CCCEEEEEC
Confidence 33344444 47777654433333345688899999999999999998887776 45 5599999999 999999999
Q ss_pred cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccC
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (314)
.||.|++||+.+++... .+..+......+... ..........+...+|+++........+.+|.. ++|+|+
T Consensus 154 ~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLR----TMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp TTSCEEEEETTTCCEEE----EECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred CCCeEEEEECcCCeEEE----EecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC
Confidence 99999999999886533 333333333333332 233344555667788888865555555666666 889998
Q ss_pred CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee--cCCcEEEEE
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSILVWD 237 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~--~dg~i~vwd 237 (314)
++.++ +|+.|+.|++||+++++....+. +| ...+.++. |+|++ ..++++|+ .|+.|++||
T Consensus 229 ~~~l~--s~~~d~~v~iwd~~~~~~~~~~~--------~~----~~~v~~~~-~~p~~---~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 229 GLQLA--SGGNDNVVQIWDARSSIPKFTKT--------NH----NAAVKAVA-WCPWQ---SNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp SSEEE--EEETTSCEEEEETTCSSEEEEEC--------CC----SSCCCEEE-ECTTS---TTEEEEECCTTTCEEEEEE
T ss_pred CCEEE--EEeCCCeEEEccCCCCCccEEec--------CC----cceEEEEE-ECCCC---CCEEEEecCCCCCEEEEEE
Confidence 87544 57779999999999998888877 55 44677887 99973 32777765 899999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCCCeEEE--ecCCCcEEEEecCCCeeeEe---------eeeeeecCCCceece
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS--GGADQKIVLYNLDHSTYVLF---------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~dg~i~iw~~~~~~~~~~---------~~~~~~~~~~~~~~~ 304 (314)
+++ ++++..+. +...|.+++|++++.+|++ |+.||.|++||+.+++.... +..+.++|++..+++
T Consensus 291 ~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 291 AAT-GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp TTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred CCC-CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 998 78887776 6788999999999999998 55899999999998655432 234567777766554
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-31 Score=225.19 Aligned_cols=232 Identities=16% Similarity=0.247 Sum_probs=178.5
Q ss_pred CceEEecCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCC-------eEEEEEeccCCcccEEEEEEcccCCC-CeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIGL-NKV 79 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l 79 (314)
+.+..+.+|.+.|++++|+| ++++|++|+.||.|+|||+.++ +.+..+.+|... |.+++|+| ++ ++|
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~p--~~~~~l 147 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR--VGIVAWHP--TAQNVL 147 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC--EEEEEECS--SBTTEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe--EEEEEECc--CCCCEE
Confidence 45667889999999999999 9999999999999999999987 567888889854 99999999 87 699
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceec
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (314)
++++.|++|++||+++++... .+ ..+...... ++|+
T Consensus 148 ~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~v~~--------------------------------------~~~~ 185 (402)
T 2aq5_A 148 LSAGCDNVILVWDVGTGAAVL----TLGPDVHPDTIYS--------------------------------------VDWS 185 (402)
T ss_dssp EEEETTSCEEEEETTTTEEEE----EECTTTCCSCEEE--------------------------------------EEEC
T ss_pred EEEcCCCEEEEEECCCCCccE----EEecCCCCCceEE--------------------------------------EEEC
Confidence 999999999999999875422 22 111111100 5689
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEe---ecCCcEE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG---YEDGSIL 234 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g---~~dg~i~ 234 (314)
|+++.++ +++.|+.|++||+++++.+..+.. +|.. ..+.++. |+|+ +. +|++| +.|+.|+
T Consensus 186 ~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~---~~~~~~~-~~~~---~~-~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 186 RDGALIC--TSCRDKRVRVIEPRKGTVVAEKDR-------PHEG---TRPVHAV-FVSE---GK-ILTTGFSRMSERQVA 248 (402)
T ss_dssp TTSSCEE--EEETTSEEEEEETTTTEEEEEEEC-------SSCS---SSCCEEE-ECST---TE-EEEEEECTTCCEEEE
T ss_pred CCCCEEE--EEecCCcEEEEeCCCCceeeeecc-------CCCC---CcceEEE-EcCC---Cc-EEEEeccCCCCceEE
Confidence 9887554 566799999999999998888731 5532 2366676 9997 55 88888 7899999
Q ss_pred EEEccCCCCceEeee-cCCcceEEEEEeCCCCeEE-EecCCCcEEEEecCCCee-eEe---------eeeeeecCCCcee
Q 021291 235 VWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTY-VLF---------GIGFVCDQEGNKF 302 (314)
Q Consensus 235 vwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~-s~s~dg~i~iw~~~~~~~-~~~---------~~~~~~~~~~~~~ 302 (314)
+||+++...++.... .|...|.+++|+|++.+|+ +|+.||.|++||+.+++. +.. +.+++++|++..+
T Consensus 249 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp EEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred EEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccc
Confidence 999998444454444 5778899999999999885 566899999999998873 222 2334556666544
Q ss_pred c
Q 021291 303 G 303 (314)
Q Consensus 303 ~ 303 (314)
+
T Consensus 329 ~ 329 (402)
T 2aq5_A 329 V 329 (402)
T ss_dssp G
T ss_pred e
Confidence 3
No 74
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.1e-32 Score=222.40 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=169.9
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCC
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDG 86 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg 86 (314)
.+++..+++|.+.|++++|+|||++|++|+.|| ++|||+++++.......+ .+..+++.+ +++.+ ++++.|+
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR----HLSKVRMLH--RTNYVAFVTGVKE 81 (355)
T ss_dssp ----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS----CCCEEEECT--TSSEEEEECSSTT
T ss_pred cCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC----CeEEEEEcC--CCCEEEEEECCcc
Confidence 355667899999999999999999999998886 789999887766554322 267788887 66666 5788889
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCC-ceeeecCCCCCC-ceeccCCCceE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG-ETVDTDSLCDSK-DDVPAEGPKYM 164 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 164 (314)
+|++||+.+++.+. .+.... .. ..+...+............+|++... +.+. .+..... .++++ ..++
T Consensus 82 ~v~iWd~~~~~~~~----~~~~~~-~v--~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~~~~~s~--~~la 151 (355)
T 3vu4_A 82 VVHIWDDVKKQDVS----RIKVDA-PV--KDLFLSREFIVVSYGDVISVFKFGNPWKRIT-DDIRFGGVCEFSN--GLLV 151 (355)
T ss_dssp EEEEEETTTTEEEE----EEECSS-CE--EEEEECSSEEEEEETTEEEEEESSTTCCBSS-CCEEEEEEEEEET--TEEE
T ss_pred EEEEEECCCCcEEE----EEECCC-ce--EEEEEcCCEEEEEEcCEEEEEECCCCceeeE-EeccCCceEEEEc--cEEE
Confidence 99999999887543 222111 11 12222233333344556777777665 2221 1111111 66777 3343
Q ss_pred EEeecCcCeEEEEecCCCc----------------eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee
Q 021291 165 AVAGEQLSEVEIWDLNTAE----------------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 228 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~----------------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~ 228 (314)
+++|+.||.|++||++++. .+..+. +| ...+.+++ |+|+ |. +|++|+
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~--------~h----~~~v~~~~-~s~~---g~-~l~s~s 214 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK--------AH----TNPIKMVR-LNRK---SD-MVATCS 214 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEE
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE--------cc----CCceEEEE-ECCC---CC-EEEEEe
Confidence 3337889999999999865 144555 66 55788898 9998 55 999999
Q ss_pred cCCc-EEEEEccCCCCceEeee-c-CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 229 EDGS-ILVWDIRNPGIPLTAMK-V-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 229 ~dg~-i~vwd~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
.|++ |++||+++ ++++..+. + |...|++++|+|++++|++++.|+.|++||++.+.
T Consensus 215 ~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 215 QDGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9998 99999998 88888888 5 99999999999999999999999999999998653
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.6e-32 Score=222.94 Aligned_cols=252 Identities=17% Similarity=0.190 Sum_probs=182.7
Q ss_pred cCCCCceeEEEEccC---CCEEEEecCCCeEEEEeCCCCe-EEEEEeccCCcccEEEEEE------cccCCCCeEEEeec
Q 021291 15 RGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQHR-TVSSSWVHSAAHGIVSVAT------GPSIGLNKVISQGR 84 (314)
Q Consensus 15 ~~h~~~v~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~~~l~s~~~ 84 (314)
.+|...|.+++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|... |.++.| +| ++++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~s~--~~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEI--INAIDGIGGLGIGE--GAPEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSC--EEEEEEESGGGCC---CCCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccc--eEEEeeccccccCC--CccEEEEEeC
Confidence 379999999999998 6999999999999999999887 88888888854 999965 56 8899999999
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecc----eeeEEEeeeeeccc---cccccCCCCcceeeccCCceeeecCCCCCC----
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTN----SYHFCKLSLVKEPY---ANAKQANEPKDCYEREVGETVDTDSLCDSK---- 153 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 153 (314)
||.|++||+++++.... .+..... ......+.+...+. .......+...+|+++....... ..|..
T Consensus 138 d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~ 214 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVA-NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCS 214 (357)
T ss_dssp TSCEEEECTTSCSSCSE-EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEE
T ss_pred CCeEEEEeCCCCCCcce-eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEE
Confidence 99999999998762211 1211111 22233322222222 22333445677888877665332 22222
Q ss_pred ceecc---CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 DDVPA---EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ~~~~~---~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
++|+| +++.++ +++.|+.|++||+++++....+... ...+| ...+.++. |+|+ ++.++++|+.|
T Consensus 215 ~~~~~~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~----~~~v~~~~-~~~~---~~~~l~~~~~d 281 (357)
T 3i2n_A 215 LEFDRKDISMNKLV--ATSLEGKFHVFDMRTQHPTKGFASV---SEKAH----KSTVWQVR-HLPQ---NRELFLTAGGA 281 (357)
T ss_dssp EEESCSSSSCCEEE--EEESTTEEEEEEEEEEETTTEEEEE---EEECC----SSCEEEEE-EETT---EEEEEEEEETT
T ss_pred EEcCCCCCCCCEEE--EECCCCeEEEEeCcCCCcccceeee---ccCCC----cCCEEEEE-ECCC---CCcEEEEEeCC
Confidence 89999 776544 4667899999999887655444310 00033 55788887 9997 44479999999
Q ss_pred CcEEEEEccCCC------------------CceEeeecCCcceEEEEEeCCCCeEE-EecCCCcEEEEecCCCee
Q 021291 231 GSILVWDIRNPG------------------IPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 231 g~i~vwd~~~~~------------------~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~i~iw~~~~~~~ 286 (314)
|.|++||++... +++..+.+|..+|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999999998632 35677889999999999999999998 899999999999987654
No 76
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-33 Score=249.44 Aligned_cols=257 Identities=16% Similarity=0.153 Sum_probs=186.0
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCC--CCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
+.++.+|.+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|... |.+++|+|..++++|++|+.||+|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~--V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSC--EEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCc--eEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999999999999999999999999998 45677788888844 999999982228999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeee-ccccccccCCCCcceeeccCCce-eeecCCCCCC----ceeccC---
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPAE--- 159 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~--- 159 (314)
++||+.+++......+..+........+++.. ..........+...+|++..... ......+|.. ++|+|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 99999987521111222233344444554442 22334445556778888876532 2223344544 888884
Q ss_pred ----------CCceEEEeecCcCeEEEEecCCCc----eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEE
Q 021291 160 ----------GPKYMAVAGEQLSEVEIWDLNTAE----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 225 (314)
Q Consensus 160 ----------~~~~~~~~g~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~ 225 (314)
+.. ++ +|+.||.|++||++++. ....+. +| ...+.++. |+|+...+. +++
T Consensus 160 ~~~~~~~~~d~~~-l~-sgs~dg~I~iwd~~~~~~~~~~~~~~~--------~h----~~~V~~l~-~sp~~~~~~-~l~ 223 (753)
T 3jro_A 160 EDGEHNGTKESRK-FV-TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS-YLA 223 (753)
T ss_dssp -------CGGGCC-EE-EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-EEE
T ss_pred cccccccCCCCCE-EE-EEECCCeEEEEeccCCcccceeeeeec--------CC----CCcEEEEE-eccCCCCCC-EEE
Confidence 554 33 56679999999998774 334444 55 45788888 999832133 899
Q ss_pred EeecCCcEEEEEccCCCC----ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 226 AGYEDGSILVWDIRNPGI----PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 226 ~g~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
+|+.||.|++||++.... .+.....|...|++++|+|++.+|++++.||.|++|+++.+.
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 999999999999987321 334445688999999999999999999999999999998643
No 77
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4e-30 Score=218.84 Aligned_cols=260 Identities=17% Similarity=0.313 Sum_probs=199.9
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++++..+.+|.+.|.+++|+ +++|++|+.||+|++||+.+++.+..+.+|... |.+++|++ +.+++++.||
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~----~~l~s~s~dg 219 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST--VRCMHLHE----KRVVSGSRDA 219 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEET----TEEEEEETTS
T ss_pred CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc--EEEEEecC----CEEEEEeCCC
Confidence 457889999999999999997 569999999999999999999999999999855 99999966 6899999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC--ceeccCCCceE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYM 164 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 164 (314)
+|++||+++++... .+..+......+... ..........+...+|++....... .+.+|.. .++..++..++
T Consensus 220 ~i~~wd~~~~~~~~----~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~ 293 (445)
T 2ovr_B 220 TLRVWDIETGQCLH----VLMGHVAAVRCVQYD-GRRVVSGAYDFMVKVWDPETETCLH-TLQGHTNRVYSLQFDGIHVV 293 (445)
T ss_dssp EEEEEESSSCCEEE----EEECCSSCEEEEEEC-SSCEEEEETTSCEEEEEGGGTEEEE-EECCCSSCEEEEEECSSEEE
T ss_pred EEEEEECCCCcEEE----EEcCCcccEEEEEEC-CCEEEEEcCCCEEEEEECCCCcEeE-EecCCCCceEEEEECCCEEE
Confidence 99999999886533 333333333333332 2333444556677888887765443 3445655 44444665443
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
+++.|+.|++||+++++.+..+. +| ...+.++. ++++ ++++|+.||.|++||+++ +++
T Consensus 294 --~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~v~~~~-~~~~------~l~~~~~dg~i~vwd~~~-~~~ 351 (445)
T 2ovr_B 294 --SGSLDTSIRVWDVETGNCIHTLT--------GH----QSLTSGME-LKDN------ILVSGNADSTVKIWDIKT-GQC 351 (445)
T ss_dssp --EEETTSCEEEEETTTCCEEEEEC--------CC----CSCEEEEE-EETT------EEEEEETTSCEEEEETTT-CCE
T ss_pred --EEeCCCeEEEEECCCCCEEEEEc--------CC----cccEEEEE-EeCC------EEEEEeCCCeEEEEECCC-CcE
Confidence 56779999999999999988887 56 33555555 6533 899999999999999998 888
Q ss_pred eEeeec---CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee------------eeeeecCCCceece
Q 021291 245 LTAMKV---HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG------------IGFVCDQEGNKFGT 304 (314)
Q Consensus 245 ~~~~~~---h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~------------~~~~~~~~~~~~~~ 304 (314)
+..+.+ |...|++++|++ .+|++|+.||.|++||+.+++.+... ..++++|++..++.
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp EEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred EEEEccCCCCCCCEEEEEECC--CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence 888886 888999999975 58999999999999999999876543 33556677666544
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-30 Score=213.01 Aligned_cols=243 Identities=17% Similarity=0.240 Sum_probs=184.5
Q ss_pred ceEEec--CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 10 PVAVLR--GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 10 ~~~~l~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
.+..+. +|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|.. .|.+++|+| ++++|++++.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~--~i~~~~~~~--~~~~l~~~~~d 162 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP--ACYALAISP--DSKVCFSCCSD 162 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSS--CEEEEEECT--TSSEEEEEETT
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCC--ceEEEEECC--CCCEEEEEeCC
Confidence 444444 899999999999999999999999999999999877 5666777774 499999999 99999999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---ceeccCCCc
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPK 162 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 162 (314)
|.|++||+++++... .+..+........+++... ........+...+|++.......... .... ++|+|+++.
T Consensus 163 g~v~~~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVR--QFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEW 238 (337)
T ss_dssp SCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSE
T ss_pred CcEEEEeCCCCceee--eeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCE
Confidence 999999999876433 2222333334444443322 22233345667788887766544322 1122 899999975
Q ss_pred eEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
++ +++.|+.|++||+++++.. .+. .| ...+.++. |+|+ ++ +|++++.||.|++||+.+ +
T Consensus 239 l~--~~~~~~~i~~~~~~~~~~~-~~~--------~~----~~~v~~~~-~~~~---~~-~l~~~~~dg~i~~~~~~~-~ 297 (337)
T 1gxr_A 239 LA--VGMESSNVEVLHVNKPDKY-QLH--------LH----ESCVLSLK-FAYC---GK-WFVSTGKDNLLNAWRTPY-G 297 (337)
T ss_dssp EE--EEETTSCEEEEETTSSCEE-EEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSEEEEEETTT-C
T ss_pred EE--EEcCCCcEEEEECCCCCeE-EEc--------CC----ccceeEEE-ECCC---CC-EEEEecCCCcEEEEECCC-C
Confidence 54 4666899999999987754 333 34 45788887 9998 55 899999999999999998 6
Q ss_pred CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+.+.. ..|...|.+++|+|++++|++++.||.|++|++.
T Consensus 298 ~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 298 ASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred eEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 65543 4588999999999999999999999999999963
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=219.77 Aligned_cols=265 Identities=13% Similarity=0.194 Sum_probs=194.6
Q ss_pred ceEEecC--CCCceeEEEEccCCC-EEEEecCCCeEEEEeC----CCCe------EEEEEec----------cCCcccEE
Q 021291 10 PVAVLRG--HRASVTDVCFHQTKP-ILFAGTTGGELRIWDT----VQHR------TVSSSWV----------HSAAHGIV 66 (314)
Q Consensus 10 ~~~~l~~--h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~----~~~~------~~~~~~~----------~~~~~~v~ 66 (314)
..+.+.. |.+.|++++|+|+++ +||+|+.||.|++||+ .+++ ....+.. |. ..|.
T Consensus 35 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~ 112 (425)
T 1r5m_A 35 FVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT--NQVT 112 (425)
T ss_dssp CCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C--BCEE
T ss_pred hhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC--CceE
Confidence 3444544 559999999999999 9999999999999999 8877 4555544 44 4599
Q ss_pred EEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeee
Q 021291 67 SVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (314)
Q Consensus 67 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (314)
+++|+| ++++|++++.||.|++|| .+++... .+..+........+++... ........+...+|++........
T Consensus 113 ~~~~s~--~~~~l~~~~~dg~i~i~~-~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 113 CLAWSH--DGNSIVTGVENGELRLWN-KTGALLN--VLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp EEEECT--TSSEEEEEETTSCEEEEE-TTSCEEE--EECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEcC--CCCEEEEEeCCCeEEEEe-CCCCeee--eccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEE
Confidence 999999 999999999999999999 3443322 2222233334444443322 222334456677888876654432
Q ss_pred cCCC------------------CCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceee
Q 021291 147 DSLC------------------DSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (314)
Q Consensus 147 ~~~~------------------~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 208 (314)
.... -..++|++++. ++ +++.|+.|++||+++++.+..+. +| ...+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~g~i~~~d~~~~~~~~~~~--------~~----~~~i~ 251 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDK--FV-IPGPKGAIFVYQITEKTPTGKLI--------GH----HGPIS 251 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTE--EE-EECGGGCEEEEETTCSSCSEEEC--------CC----SSCEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCE--EE-EEcCCCeEEEEEcCCCceeeeec--------cC----CCceE
Confidence 2111 11178888753 33 46668999999999998887776 55 44678
Q ss_pred eEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
++. |+|+ ++ +|++++.|+.|++||+++ ++++..+.+|...|.+++|+|++ +|++++.||.|++||+++++.+.
T Consensus 252 ~~~-~~~~---~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 252 VLE-FNDT---NK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp EEE-EETT---TT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred EEE-ECCC---CC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 887 9998 44 899999999999999998 78888899999999999999999 89999999999999999988776
Q ss_pred ee-------eeeeecCCCceece
Q 021291 289 FG-------IGFVCDQEGNKFGT 304 (314)
Q Consensus 289 ~~-------~~~~~~~~~~~~~~ 304 (314)
.. ..+.++|++..+++
T Consensus 325 ~~~~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 325 LSIVDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp EEECTTCCEEEEEECTTSSEEEE
T ss_pred ecccCCccEEEEEEcCCCCEEEE
Confidence 53 34567777776654
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-31 Score=223.06 Aligned_cols=253 Identities=12% Similarity=0.032 Sum_probs=186.5
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEE--eccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS--WVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
++..+.+|...|.+++|+|++++|++++.||.|++||+++++....+ ..|. ..|.+++|+| ++++|++++.|+.
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~ 119 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN--RAARCVRWAP--NEKKFAVGSGSRV 119 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS--SCEEEEEECT--TSSEEEEEETTSS
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC--CceeEEEECC--CCCEEEEEeCCCE
Confidence 78889999999999999999999999999999999999988766555 3455 5599999999 9999999999999
Q ss_pred EEEEeCCCCCCCCCCee--eeecceeeEEEeeeeeccccccccCCCCcceeeccC-----------------CceeeecC
Q 021291 88 VKCWDIENGGLSSNPSL--TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-----------------GETVDTDS 148 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 148 (314)
|++||++.+........ ..+........+++... ........+...+|++.. .......+
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 99999988753110000 11122333333333221 222333456677787531 22334445
Q ss_pred CCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEE
Q 021291 149 LCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (314)
Q Consensus 149 ~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l 224 (314)
..|.. ++|+|+++.++ +++.|+.|++||+++++.+..+. .| ...+.++. |+|+ +. ++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~l 259 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVA--WVSHDSTVCLADADKKMAVATLA--------SE----TLPLLAVT-FITE---SS-LV 259 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEE--EEETTTEEEEEEGGGTTEEEEEE--------CS----SCCEEEEE-EEET---TE-EE
T ss_pred CCCCCeEEEEEECCCCCEEE--EEeCCCEEEEEECCCCceeEEEc--------cC----CCCeEEEE-EecC---CC-EE
Confidence 56655 89999987544 56679999999999999988887 55 34678887 9997 54 67
Q ss_pred EEeecCCcEEEEEccC--CC-------------------------------Cce------Eee-ecCCcceEEEEEe-CC
Q 021291 225 LAGYEDGSILVWDIRN--PG-------------------------------IPL------TAM-KVHLEPVLCLSID-ES 263 (314)
Q Consensus 225 ~~g~~dg~i~vwd~~~--~~-------------------------------~~~------~~~-~~h~~~v~~~~~~-~~ 263 (314)
++| .|+.|++||++. .. ... ..+ .+|..+|++++|. ++
T Consensus 260 ~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 338 (372)
T 1k8k_C 260 AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGG 338 (372)
T ss_dssp EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEEST
T ss_pred EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCC
Confidence 777 899999999986 10 000 223 4899999999975 77
Q ss_pred C---CeEEEecCCCcEEEEecCCCeee
Q 021291 264 C---NGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 264 ~---~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
+ .+|+||+.||.|++|++++++.+
T Consensus 339 g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 339 KAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp TTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred CcceeeEEEecCCCceEEEEecChhHh
Confidence 6 89999999999999999877654
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.7e-30 Score=218.26 Aligned_cols=273 Identities=16% Similarity=0.175 Sum_probs=196.2
Q ss_pred CCCceEEecCCC----CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 7 PPDPVAVLRGHR----ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 7 ~~~~~~~l~~h~----~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
|..|.++|.+.. -.++.|+|+++ ++||+|. |++|+|||..+++....+..+.+...|++|+|+| ++++|++|
T Consensus 90 ~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp--dg~~lasg 165 (420)
T 4gga_A 90 PSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAVG 165 (420)
T ss_dssp CSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEEE
T ss_pred CCCCceEEECCCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC--CCCEEEEE
Confidence 444556665432 13678999975 4777764 9999999999999988887665556799999999 99999999
Q ss_pred ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc
Q 021291 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA 158 (314)
Q Consensus 83 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 158 (314)
+.||+|++||+++++.+. ....+......+.... ..............++..........+.+|.. +.++|
T Consensus 166 s~Dg~v~iWd~~~~~~~~----~~~~h~~~v~~~s~~~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~ 240 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLR----NMTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240 (420)
T ss_dssp ETTSCEEEEETTTTEEEE----EECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred ECCCeEEEEEcCCCcEEE----EEeCCCCceEEEeeCC-CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC
Confidence 999999999999987543 4444433333333322 22233344455666777666655566667766 88899
Q ss_pred CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE--eecCCcEEEE
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSILVW 236 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg~i~vw 236 (314)
++..++ +++.|+.+++||..+++...... .........+.++. |+|... . ++++ |+.|+.|++|
T Consensus 241 ~g~~l~--s~~~D~~v~i~~~~~~~~~~~~~--------~~~~~~~~~V~~~~-~~p~~~--~-~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 241 DGRHLA--SGGNDNLVNVWPSAPGEGGWVPL--------QTFTQHQGAVKAVA-WCPWQS--N-VLATGGGTSDRHIRIW 306 (420)
T ss_dssp TSSEEE--EEETTSCEEEEESSCCSSCSCCS--------EEECCCSSCEEEEE-ECTTCT--T-EEEEEECTTTCEEEEE
T ss_pred CCCeee--eeeccccceEEeeccccccceee--------eeecccCCceeeee-eCCCcc--c-EEEEEeecCCCEEEEE
Confidence 987544 56779999999998776422111 01111355788887 999843 2 5554 5689999999
Q ss_pred EccCCCCceEeeecCCcceEEEEEeCCCCeEEEec--CCCcEEEEecCCCeeeEeee-------eeeecCCCceece
Q 021291 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTYVLFGI-------GFVCDQEGNKFGT 304 (314)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~i~iw~~~~~~~~~~~~-------~~~~~~~~~~~~~ 304 (314)
|+++ +.++..+.. ...+.++.|++++..+++++ .|+.|+|||+.+++.+..+. .++++|+|..+++
T Consensus 307 d~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 307 NVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp ETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred eCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 9998 788777775 46789999999999887754 79999999999999887643 4567888877665
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.5e-31 Score=221.02 Aligned_cols=255 Identities=9% Similarity=0.070 Sum_probs=179.3
Q ss_pred CceEEec--CCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEEEeccC-CcccEEEEEEcccCCCCeEEEeec
Q 021291 9 DPVAVLR--GHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 9 ~~~~~l~--~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
+....+. +|.+.|.+++|+| ++++|++++.||.|++||+.+ +.+..+..+. ....|.+++|+| ++++|++++.
T Consensus 107 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~ 183 (383)
T 3ei3_B 107 NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV--SRQMLATGDS 183 (383)
T ss_dssp TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET--TTTEEEEEET
T ss_pred ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC--CCCEEEEECC
Confidence 3444444 7999999999999 789999999999999999986 5555555443 224599999999 9999999999
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC----CceeeecCCCCCC----cee
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV----GETVDTDSLCDSK----DDV 156 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~ 156 (314)
|+.|++||++ ++... .+..+........+++............+...+|++.. ...... + +|.. ++|
T Consensus 184 d~~i~i~d~~-~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~-~~~~~v~~~~~ 258 (383)
T 3ei3_B 184 TGRLLLLGLD-GHEIF--KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE-M-PHEKPVNAAYF 258 (383)
T ss_dssp TSEEEEEETT-SCEEE--EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE-E-ECSSCEEEEEE
T ss_pred CCCEEEEECC-CCEEE--EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE-e-cCCCceEEEEE
Confidence 9999999995 33221 22223344444555554433444555566788888876 222222 2 3444 899
Q ss_pred cc-CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCC------CceeeeEEEecCCCCCCceEEEEeec
Q 021291 157 PA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG------RGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 157 ~~-~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~------~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
+| ++..++ +++.|+.|++||+++++....+..... ....|.... .+....+. |+|+ ++ + +|+.
T Consensus 259 s~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~-~s~d---g~-~--s~s~ 328 (383)
T 3ei3_B 259 NPTDSTKLL--TTDQRNEIRVYSSYDWSKPDQIIIHPH-RQFQHLTPIKATWHPMYDLIVAG-RYPD---DQ-L--LLND 328 (383)
T ss_dssp CTTTSCEEE--EEESSSEEEEEETTBTTSCSEEEECCB-CCCTTSCCCCCEECSSSSEEEEE-CBCC---TT-T--CTTC
T ss_pred cCCCCCEEE--EEcCCCcEEEEECCCCccccccccccc-cccccccceEEeccCCCCceEEE-ecCC---cc-c--ccCC
Confidence 99 886544 566799999999999887766652100 000111111 12233344 6665 43 3 7789
Q ss_pred CCcEEEEEccCCCCceEeeec--CCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 230 DGSILVWDIRNPGIPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
|+.|++||+.+ ++++..+.+ |...+..++|+|++.+|++++ ||.|++||+++
T Consensus 329 d~~i~iwd~~~-~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 329 KRTIDIYDANS-GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCEEEEETTT-CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCeEEEEecCC-CceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 99999999998 888888887 457788889999999999997 99999999875
No 83
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.3e-31 Score=248.53 Aligned_cols=260 Identities=12% Similarity=0.192 Sum_probs=201.8
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
.....+.+|.+.|++++|+|+|++|++|+.||+|++||+.+++.+..+.+|... |.+++|+| ++++|++++.|++|
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDE--VLCCAFSS--DDSYIATCSADKKV 681 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCC--EEEEEEec--CCCEEEEEeCCCeE
Confidence 345678899999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeecc-ccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCce
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP-YANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (314)
++||+.+++... .+..+........+++.... ........+...+|++....... .+.+|.. ++|+|+++.+
T Consensus 682 ~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~-~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 682 KIWDSATGKLVH--TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN-TMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE-EECCCSSCEEEEEECSSTTEE
T ss_pred EEEECCCCceEE--EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh-eecCCCCCEEEEEEecCCCEE
Confidence 999999987644 33334444444555443222 23344455678889988776544 3445655 8999999754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccC--------------CCCCc-----------------------------C
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCG--------------GSPNF-----------------------------S 200 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~--------------~~~~h-----------------------------~ 200 (314)
+ +++.||.|++||+++++....+...... ..... .
T Consensus 759 ~--s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~ 836 (1249)
T 3sfz_A 759 A--SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIH 836 (1249)
T ss_dssp E--EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred E--EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEc
Confidence 4 5777999999999888765554311000 00000 0
Q ss_pred CCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
......+.++. |+|+ +. ++++++.||.|++||+.+ +..+..+.+|...|++++|+|++.+|++++.||.|++|+
T Consensus 837 ~~~~~~v~~~~-~sp~---~~-~l~~~~~dg~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 837 TGHHSTIQYCD-FSPY---DH-LAVIALSQYCVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp CSSSSCCCEEE-ECSS---TT-EEEEECSSSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCCceEEEE-EcCC---CC-EEEEEeCCCeEEEEEcCC-CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 01234566776 9997 44 899999999999999998 888999999999999999999999999999999999999
Q ss_pred cCC
Q 021291 281 LDH 283 (314)
Q Consensus 281 ~~~ 283 (314)
+..
T Consensus 911 ~~~ 913 (1249)
T 3sfz_A 911 TKK 913 (1249)
T ss_dssp HHH
T ss_pred ccc
Confidence 764
No 84
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-31 Score=212.96 Aligned_cols=207 Identities=9% Similarity=0.126 Sum_probs=142.7
Q ss_pred CceeEEEEccC----CCEEEEec--------------------CCCeEEEEeC-CCCeEEEEEeccCCcccEEEEEEcc-
Q 021291 19 ASVTDVCFHQT----KPILFAGT--------------------TGGELRIWDT-VQHRTVSSSWVHSAAHGIVSVATGP- 72 (314)
Q Consensus 19 ~~v~~~~~~~~----~~~l~s~~--------------------~dg~v~iwd~-~~~~~~~~~~~~~~~~~v~~~~~~~- 72 (314)
..|++++|+|| ++++++++ .|+.|++|++ .+++.+..+.+|... +..++|++
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~--v~~l~fs~~ 189 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE--ETILTFAEV 189 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS--SCEEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc--eeeEEeecc
Confidence 35677777888 77777655 3888999998 558888888888865 66777776
Q ss_pred cCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCC
Q 021291 73 SIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS 152 (314)
Q Consensus 73 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (314)
..++..|++++.|++|+|||+++++++. ++..+..... ....
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~----tL~g~~~~v~--~v~~-------------------------------- 231 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLK----KMHIDDSYQA--SVCH-------------------------------- 231 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEE----EEECCC---C--CCEE--------------------------------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEE----EEcCCCccee--eeEE--------------------------------
Confidence 3356899999999999999999997644 3332111000 0000
Q ss_pred CceeccCCCceE----------EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCce
Q 021291 153 KDDVPAEGPKYM----------AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 153 ~~~~~~~~~~~~----------~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~ 222 (314)
++|+|+|..++ +++|+.|++|++||..+++.+..+... ...+|.. ...+.. ++ +.
T Consensus 232 -vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~---~p~Gh~~----~~lsg~-~s-----g~- 296 (356)
T 2w18_A 232 -KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC---LPPGQAG----RFLEGD-VK-----DH- 296 (356)
T ss_dssp -EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC---CCTTCCC----CEEEEE-EE-----TT-
T ss_pred -EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee---ccCCCcc----eeEccc-cC-----CC-
Confidence 34667665442 357889999999999999887655210 0014422 233333 33 33
Q ss_pred EEEEeecCCcEEEEEccCCCCceEeeecCCcceE-EEEEeCCCCeEEEecCCCcEEEEec
Q 021291 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL-CLSIDESCNGGISGGADQKIVLYNL 281 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~i~iw~~ 281 (314)
++++|+.|++|+|||+.+ ++++.++.+|...+. .++|+|+|++|++|+.|++|+|||+
T Consensus 297 ~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 899999999999999998 899999999988665 5899999999999999999999996
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.1e-31 Score=220.61 Aligned_cols=241 Identities=14% Similarity=0.160 Sum_probs=176.1
Q ss_pred CCCceeEEEEccC----CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEe
Q 021291 17 HRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (314)
Q Consensus 17 h~~~v~~~~~~~~----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 92 (314)
|...|++++|+|+ +++|++|+.||.|++||+.+++.+..+.+|... |.+++|+|. ++++|++++.||.|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~--i~~~~~~~~-~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNA--INELKFHPR-DPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSC--EEEEEECSS-CTTEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCc--EEEEEECCC-CCCEEEEEeCCCeEEEEE
Confidence 6688999999998 679999999999999999999999999988854 999999984 468999999999999999
Q ss_pred CCCCCCCCCCee---eeecceeeEEEeeeeeccccccccCCCCcceeeccCCceee------------------------
Q 021291 93 IENGGLSSNPSL---TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD------------------------ 145 (314)
Q Consensus 93 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 145 (314)
+++++... .+ ..+........+++... ........+...+|++.......
T Consensus 145 ~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 145 IQTDTLVA--IFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp TTTTEEEE--EECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred eecCeEEE--EecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 99876433 11 12233344444444322 22233345667777776543211
Q ss_pred ---ecCCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCce--------------eeeecccccCCCCCcCCCCC
Q 021291 146 ---TDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--------------CTRLHQNSCGGSPNFSSKGR 204 (314)
Q Consensus 146 ---~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~--------------~~~~~~~~~~~~~~h~~~~~ 204 (314)
.....|.. ++|+ ++ +++ +++.|+.|++||+++++. +..+. +| .
T Consensus 222 ~~~~~~~~~~~~v~~~~~~--~~-~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~ 285 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWL--GD-LIL-SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD--------YS----Q 285 (366)
T ss_dssp CSEEECSSCSSCCCEEEEE--TT-EEE-EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE--------CS----S
T ss_pred CccccccCCcceEEEEEEc--CC-EEE-EEecCCEEEEEeCCCccccccccccCCcchheecccc--------cc----C
Confidence 11112444 6666 44 343 677799999999987754 44444 44 3
Q ss_pred ceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc----eEeeecC--CcceEEEEEeCCCCeEEEecCCCcEEE
Q 021291 205 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP----LTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVL 278 (314)
Q Consensus 205 ~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~----~~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~i 278 (314)
..+.++. |+|+.. ++ +|++|+.||.|++||+++ +++ ...+.+| ...|++++|+|++++|++++.||.|++
T Consensus 286 ~~v~~~~-~s~~~~-~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 361 (366)
T 3k26_A 286 CDIWYMR-FSMDFW-QK-MLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWR 361 (366)
T ss_dssp CCSSCCC-CEECTT-SS-EEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CcEEEEE-EcCCCC-Cc-EEEEEecCCcEEEEECCC-CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEE
Confidence 3566666 888721 34 999999999999999997 543 3467777 789999999999999999999999999
Q ss_pred EecCC
Q 021291 279 YNLDH 283 (314)
Q Consensus 279 w~~~~ 283 (314)
||+.+
T Consensus 362 wd~~~ 366 (366)
T 3k26_A 362 WDRLR 366 (366)
T ss_dssp EEC--
T ss_pred EEecC
Confidence 99863
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-30 Score=209.09 Aligned_cols=245 Identities=16% Similarity=0.228 Sum_probs=186.3
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC---eEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH---RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
.+....+.+|...|.+++|+|++++|++|+.||.|++|++... +.+..+..|... |.+++|.+ +.|++++.
T Consensus 49 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~----~~l~~~~~ 122 (313)
T 3odt_A 49 QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN--VCSLSFQD----GVVISGSW 122 (313)
T ss_dssp SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC--EEEEEEET----TEEEEEET
T ss_pred CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC--EEEEEecC----CEEEEEeC
Confidence 4567788899999999999999999999999999999998754 567778888844 99999944 79999999
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC-CCC----ceeccC
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSK----DDVPAE 159 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~ 159 (314)
||.|++|| .++... .+..+........+.+............+...+|+. . .....+.. |.. ++|+|+
T Consensus 123 d~~i~~~d--~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~-~~~~~~~~~~~~~i~~~~~~~~ 195 (313)
T 3odt_A 123 DKTAKVWK--EGSLVY--NLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--D-KVIKTFSGIHNDVVRHLAVVDD 195 (313)
T ss_dssp TSEEEEEE--TTEEEE--EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--T-EEEEEECSSCSSCEEEEEEEET
T ss_pred CCCEEEEc--CCcEEE--ecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--C-ceEEEEeccCcccEEEEEEcCC
Confidence 99999999 222211 222233333333333322333344444556666762 2 22222332 444 889999
Q ss_pred CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEcc
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (314)
+. ++ +++.|+.|++||+++++.+..+. +| ...+.++. |+|+ + .+++++.||.|++||++
T Consensus 196 ~~--~~-~~~~dg~i~i~d~~~~~~~~~~~--------~~----~~~i~~~~-~~~~---~--~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 196 GH--FI-SCSNDGLIKLVDMHTGDVLRTYE--------GH----ESFVYCIK-LLPN---G--DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp TE--EE-EEETTSEEEEEETTTCCEEEEEE--------CC----SSCEEEEE-ECTT---S--CEEEEETTSEEEEECTT
T ss_pred Ce--EE-EccCCCeEEEEECCchhhhhhhh--------cC----CceEEEEE-EecC---C--CEEEEecCCEEEEEECC
Confidence 86 33 56679999999999999988887 56 45788887 9997 4 48899999999999999
Q ss_pred CCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+ ++++..+..|...|.+++|+|+++ +++++.||.|++||+++++...
T Consensus 255 ~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 255 N-GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp T-CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred C-CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 8 888999999999999999999998 6679999999999999876543
No 87
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-30 Score=221.76 Aligned_cols=247 Identities=15% Similarity=0.291 Sum_probs=183.8
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++.+..+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+..|... |.+++|++ +.|++|+.||
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~----~~l~s~s~dg 233 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA--VLHLRFNN----GMMVTCSKDR 233 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC--EEEEECCT----TEEEEEETTS
T ss_pred CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc--EEEEEEcC----CEEEEeeCCC
Confidence 45778899999999999999 7889999999999999999999999999998854 99999976 6999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC--ceeccCCCceE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYM 164 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 164 (314)
.|++||++++..... ......+......+.. ...........+...+|++........ +.+|.. .++..+++ .+
T Consensus 234 ~i~vwd~~~~~~~~~-~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~-~l 309 (435)
T 1p22_A 234 SIAVWDMASPTDITL-RRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRDR-LV 309 (435)
T ss_dssp CEEEEECSSSSCCEE-EEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEE-EECCSSCEEEEEEETT-EE
T ss_pred cEEEEeCCCCCCcee-eeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEE-EcCCCCcEEEEEeCCC-EE
Confidence 999999998764320 1122223223333333 222333444556778888877655443 345555 44444554 34
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC-
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI- 243 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~- 243 (314)
+ +|+.|+.|++||+++++.+..+. +| ...+.++. |. +. +|++|+.||.|++||++. +.
T Consensus 310 ~-~g~~dg~i~iwd~~~~~~~~~~~--------~h----~~~v~~~~-~~-----~~-~l~sg~~dg~i~vwd~~~-~~~ 368 (435)
T 1p22_A 310 V-SGSSDNTIRLWDIECGACLRVLE--------GH----EELVRCIR-FD-----NK-RIVSGAYDGKIKVWDLVA-ALD 368 (435)
T ss_dssp E-EEETTSCEEEEETTTCCEEEEEC--------CC----SSCEEEEE-CC-----SS-EEEEEETTSCEEEEEHHH-HTS
T ss_pred E-EEeCCCeEEEEECCCCCEEEEEe--------CC----cCcEEEEE-ec-----CC-EEEEEeCCCcEEEEECCC-CCC
Confidence 3 57779999999999999998887 66 44677776 74 33 899999999999999975 33
Q ss_pred --------ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 244 --------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 244 --------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
++..+.+|...|++++| ++.+|++++.||.|++||+.++....
T Consensus 369 ~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 369 PRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp TTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred ccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 67888999999999999 56689999999999999998876544
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-30 Score=213.27 Aligned_cols=247 Identities=14% Similarity=0.151 Sum_probs=181.6
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEE--cccCCCCeEEEeecCCeE
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT--GPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~s~~~dg~v 88 (314)
...+.+|.+.|++++|+|++++|++++.||.|++||+++++.+. +..|. ..|.+++| +| ++.+|++++.||.|
T Consensus 79 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~--~~v~~~~~~~~~--~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHD--APVKTIHWIKAP--NYSCVMTGSWDKTL 153 (368)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECS--SCEEEEEEEECS--SCEEEEEEETTSEE
T ss_pred EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ecccc--CceEEEEEEeCC--CCCEEEEccCCCcE
Confidence 37889999999999999999999999999999999999988776 45677 44999999 66 88999999999999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC---CCC--ceeccCCCc-
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC---DSK--DDVPAEGPK- 162 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~- 162 (314)
++||+++++... .+..... ...+... ..............+|++............ +.. +++.++...
T Consensus 154 ~vwd~~~~~~~~----~~~~~~~-~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 154 KFWDTRSSNPMM----VLQLPER-CYCADVI-YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNK 227 (368)
T ss_dssp EEECSSCSSCSE----EEECSSC-EEEEEEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSC
T ss_pred EEEECCCCcEEE----EEecCCC-ceEEEec-CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCC
Confidence 999999887544 3332221 1112222 223334444556677777665443333222 222 445444432
Q ss_pred -eEEEeecCcCeEEEEecCCC---ceeeeecccccCCCCCcCCCC--------CceeeeEEEecCCCCCCceEEEEeecC
Q 021291 163 -YMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGGSPNFSSKG--------RGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 163 -~~~~~g~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~h~~~~--------~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
..+++++.|+.|++||++.. .....+. +|.... ...+.++. |+|+ ++ +|++|+.|
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~-~sp~---~~-~l~s~~~d 294 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNPAKDNFTFK--------CHRSNGTNTSAPQDIYAVNGIA-FHPV---HG-TLATVGSD 294 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCHHHHSEEEE--------CSEEC----CCCEEECCEEEEE-ECTT---TC-CEEEEETT
T ss_pred CCeEEEecCCCcEEEEecCCCCccccceeee--------eeecccccccccccccceEEEE-EecC---CC-EEEEEccC
Confidence 12336777999999999987 4455555 442211 11588887 9998 54 89999999
Q ss_pred CcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
|.|++||+++ ++++..+.+|..+|++++|+|++.+|++++.|+..+.|++-
T Consensus 295 g~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 295 GRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp SCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 9999999998 88899999999999999999999999999998866655543
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-30 Score=228.87 Aligned_cols=254 Identities=13% Similarity=0.071 Sum_probs=191.6
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCccc-EEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHG-IVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
.|.+.|.+++|+|++++|++++ ++.|+|||+.++ +....+.+|. .. |.+++|+|..++++|++++.||+|++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~--~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHG--SSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTT--TSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCC--CceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 5899999999999999999998 789999999998 8889998887 77 99999998445689999999999999
Q ss_pred EeCCCC------CCCCCCeeeeecceeeEEEeeeeeccccccccCCC-CcceeeccCCceeeecCCCCCC----ceeccC
Q 021291 91 WDIENG------GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE-PKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (314)
Q Consensus 91 wd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (314)
||+.++ +......+..+........+++............. ...++..+. ......+.+|.. ++|+|+
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEEEECCSCSSCEEEEEECSS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcceeeecCCccEEEEEECCC
Confidence 999754 11110012222333444444443322222221111 123333333 334445566766 899999
Q ss_pred CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCC-CCCCceEEEEeecCCcEEEEEc
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS-KSQGFVNVLAGYEDGSILVWDI 238 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~-~~~g~~~l~~g~~dg~i~vwd~ 238 (314)
++.+++ +++.|+.|++||+++++.+..+. +|.. ....+.++. |+|+ +. +|++++.||.|++||+
T Consensus 172 ~~~~l~-~~~~d~~v~vwd~~~~~~~~~~~--------~~~~-~~~~v~~~~-~~~~~~~----~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 172 RPMRSM-TVGDDGSVVFYQGPPFKFSASDR--------THHK-QGSFVRDVE-FSPDSGE----FVITVGSDRKISCFDG 236 (615)
T ss_dssp SSCEEE-EEETTTEEEEEETTTBEEEEEEC--------SSSC-TTCCEEEEE-ECSTTCC----EEEEEETTCCEEEEET
T ss_pred CCcEEE-EEeCCCcEEEEeCCCcceeeeec--------ccCC-CCceEEEEE-ECCCCCC----EEEEEeCCCeEEEEEC
Confidence 986665 56679999999999999888887 5532 111688887 9997 43 8999999999999999
Q ss_pred cCCCCceEee-e---cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 239 RNPGIPLTAM-K---VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 239 ~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
++ ++++..+ . .|...|.+++|+ ++.+|++++.||.|++||+++++.+...
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 237 KS-GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp TT-CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CC-CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 98 7888888 6 899999999999 9999999999999999999998877654
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.6e-31 Score=223.63 Aligned_cols=231 Identities=15% Similarity=0.094 Sum_probs=151.2
Q ss_pred eEEecCCCCceeEEEEcc--------CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCC-CeEEE
Q 021291 11 VAVLRGHRASVTDVCFHQ--------TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL-NKVIS 81 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~--------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s 81 (314)
+..+.||.+.|++++|+| |+++||+|+.|++|+|||+.++.++..+..|.. .|.+++|+| ++ .+|++
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~--~v~~v~~~p--~~~~~l~~ 204 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS--PGISVQFRP--SNPNQLIV 204 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSS--CEEEEEEET--TEEEEEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCC--CcEEEEECC--CCCceEEe
Confidence 445789999999999998 789999999999999999998888888888884 499999999 65 47999
Q ss_pred eecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceec
Q 021291 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (314)
Q Consensus 82 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (314)
++.|++|++||+++++...... ..........+......... .....+|.. +.|+
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~--~~~~~~~~~~~s~~~~~~~~-------------------~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENS--QTELVKNPWLLTLNTLPLVN-------------------TCHSSGIASSLANVRWI 263 (393)
T ss_dssp EETTSEEEEEETTCCC------------CSCCCSEEEESGGGC-------------------------CCSSSCSEEEEE
T ss_pred cCCCCEEEEEECCCCccccccc--ccCCcccceEEeccccccee-------------------eeecccccccceeeeee
Confidence 9999999999999886543111 11111111111111111000 001112222 5555
Q ss_pred -cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCC--------------CceeeeEEEecCCCCCCce
Q 021291 158 -AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG--------------RGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 158 -~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~--------------~~~~~~~~~~~p~~~~g~~ 222 (314)
++++.++ +++.|+++++||+..++....+. .|.... ........ |+|.. +..
T Consensus 264 ~~dg~~l~--s~s~d~~i~vwd~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~ 330 (393)
T 4gq1_A 264 GSDGSGIL--AMCKSGAWLRWNLFANNDYNEIS--------DSTMKLGPKNLLPNVQGISLFPSLLGAC-PHPRY--MDY 330 (393)
T ss_dssp TTTTCEEE--EECTTSEEEEEEC---------------------------CCSCSEEEECSSCCSSCCE-ECSSC--TTE
T ss_pred cCCCCEEE--EEeCCCCEEEEECccCCCCceEe--------eecCccccEEEccccccccccCcceeEE-EccCC--CCE
Confidence 7776544 67789999999998877655544 121110 11122233 55542 333
Q ss_pred EEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEec
Q 021291 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~ 281 (314)
++++|+.||.|++||+.+ ++++..+.+|..+|++|+|+|+|++||+++.|| +.+|.+
T Consensus 331 ~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEEETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEEECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 788899999999999998 777888888999999999999999999998777 555554
No 91
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-31 Score=228.77 Aligned_cols=248 Identities=13% Similarity=0.046 Sum_probs=176.3
Q ss_pred EEecCCCCceeEEEEccC------CCEEEEecCCCeEEEEeCCCCeE-----------EEEEeccCCcccEEEEEEcccC
Q 021291 12 AVLRGHRASVTDVCFHQT------KPILFAGTTGGELRIWDTVQHRT-----------VSSSWVHSAAHGIVSVATGPSI 74 (314)
Q Consensus 12 ~~l~~h~~~v~~~~~~~~------~~~l~s~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~ 74 (314)
.++.+|.+.|.+++|+|+ +.+||+++.||+|+|||+.+++. ...+.+|. ..|.+++|++
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~--~~v~sv~~s~-- 276 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD--SLITTFDFLS-- 276 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT--TCEEEEEESS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC--CCEEEEEecC--
Confidence 457788999999999996 57999999999999999986632 23567777 4599999998
Q ss_pred CCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEE--eeeeeccccccccCCCCcceeeccCCcee---eecCC
Q 021291 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCK--LSLVKEPYANAKQANEPKDCYEREVGETV---DTDSL 149 (314)
Q Consensus 75 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 149 (314)
+ ..|++|+.||+|++||++++.... ..+..+...+.... ++..+..........+...+|+++..... .....
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~-~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPS-FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCS-EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCce-EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc
Confidence 6 589999999999999999764321 01233333333321 11111123344555677888888765422 11122
Q ss_pred C-C-CCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEe
Q 021291 150 C-D-SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 227 (314)
Q Consensus 150 ~-~-~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g 227 (314)
. . ..++|+|+++.++ +++.|++|++||++++.++..+. +| ...+.+++ |+|+ |+ +|++|
T Consensus 355 ~~~v~~v~fsp~~~~l~--s~~~d~tv~lwd~~~~~~~~~l~--------gH----~~~V~sva-~Sp~---g~-~l~Sg 415 (524)
T 2j04_B 355 GSNLVPVVYCPQIYSYI--YSDGASSLRAVPSRAAFAVHPLV--------SR----ETTITAIG-VSRL---HP-MVLAG 415 (524)
T ss_dssp CCSCCCEEEETTTTEEE--EECSSSEEEEEETTCTTCCEEEE--------EC----SSCEEEEE-CCSS---CC-BCEEE
T ss_pred cCcccceEeCCCcCeEE--EeCCCCcEEEEECcccccceeee--------cC----CCceEEEE-eCCC---CC-eEEEE
Confidence 1 1 2289999987543 56668999999999998877777 66 45788998 9998 55 89999
Q ss_pred ecCCcEEEEEccCC-------------------------------------------CCceEeeecCCcceEEEEEeCCC
Q 021291 228 YEDGSILVWDIRNP-------------------------------------------GIPLTAMKVHLEPVLCLSIDESC 264 (314)
Q Consensus 228 ~~dg~i~vwd~~~~-------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~ 264 (314)
+.||+|++||.... +..+..+.+|..+|++|+|+|++
T Consensus 416 s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 416 SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCST
T ss_pred ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCC
Confidence 99999999985310 11223455788899999999995
Q ss_pred C---eEEEecCCCcEEEEecCCC
Q 021291 265 N---GGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 265 ~---~l~s~s~dg~i~iw~~~~~ 284 (314)
. .|++|+.||.|+||+++..
T Consensus 496 ~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 496 AGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTTTEEEEECTTSEEEEEECSCC
T ss_pred CccHHHHhhccCceEEEEEcccc
Confidence 4 8999999999999998754
No 92
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.7e-31 Score=221.85 Aligned_cols=213 Identities=15% Similarity=0.191 Sum_probs=164.4
Q ss_pred ecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeC
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 93 (314)
+.+| ..+....|++++++|++|+.||.|++||+.+++....+..|... |.+++|+| ++++|++++.|++|++||+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSE--ITKLKFFP--SGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSC--EEEEEECT--TSSEEEEEETTSEEEEEET
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCc--cEEEEECC--CCCEEEEEeCCCeEEEEeC
Confidence 3344 44555578999999999999999999999999988888888854 99999999 9999999999999999999
Q ss_pred CCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCe
Q 021291 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSE 173 (314)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 173 (314)
++++... .+..+...... ++|+|+++.++ +++.|+.
T Consensus 169 ~~~~~~~----~~~~h~~~v~~--------------------------------------~~~~~~~~~l~--s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPR----TLIGHRATVTD--------------------------------------IAIIDRGRNVL--SASLDGT 204 (420)
T ss_dssp TTCCCCE----EEECCSSCEEE--------------------------------------EEEETTTTEEE--EEETTSC
T ss_pred CCCcCce----EEcCCCCcEEE--------------------------------------EEEcCCCCEEE--EEcCCCc
Confidence 9886543 22222111110 56889987554 5777999
Q ss_pred EEEEecCCCceeeeecccccCCCCCcCCC-----------------CCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSK-----------------GRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~~~~~~h~~~-----------------~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
|++||+++++.+..+.... .|... ....+.++. |+|+ ++ +|++|+.||.|++|
T Consensus 205 v~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~---~~-~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKE-----NPHDGVNSIALFVGTDRQLHEISTSKKNNLE-FGTY---GK-YVIAGHVSGVITVH 274 (420)
T ss_dssp EEEEETTTTEEEEEECBTT-----BTTCCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCT---TE-EEEEEETTSCEEEE
T ss_pred EEEeECCCCceeEEeecCC-----CCCCCccEEEEecCCcceeeecccCcccceE-EcCC---CC-EEEEEcCCCeEEEE
Confidence 9999999999888876210 11000 012334444 6776 55 89999999999999
Q ss_pred EccCCCCceEee-ecCCcceEEEEEeCCCC-eEEEecCCCcEEEEecCCCee
Q 021291 237 DIRNPGIPLTAM-KVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 237 d~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~iw~~~~~~~ 286 (314)
|+++ ++.+..+ ..|...|++++|+|++. +|++|+.||.|++||+++++.
T Consensus 275 d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 275 NVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp ETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred ECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 9998 5555444 46889999999999998 999999999999999998754
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=4.2e-30 Score=218.06 Aligned_cols=239 Identities=17% Similarity=0.286 Sum_probs=185.9
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEE
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 89 (314)
.+....+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|... |.+++|. ++.|++|+.||+|+
T Consensus 125 ~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~l~~~----~~~l~sg~~dg~i~ 196 (435)
T 1p22_A 125 RIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS--VLCLQYD----ERVIITGSSDSTVR 196 (435)
T ss_dssp CEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSC--EEEEECC----SSEEEEEETTSCEE
T ss_pred EEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCc--EEEEEEC----CCEEEEEcCCCeEE
Confidence 34445567888999988 7889999999999999999999999999999854 9999983 48999999999999
Q ss_pred EEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCcee--eecCCCCCC--ceeccCCCceEE
Q 021291 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV--DTDSLCDSK--DDVPAEGPKYMA 165 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~ 165 (314)
+||+.+++... .+..+......+... ..........+...+|++...... ...+.+|.. .++..+++.++
T Consensus 197 vwd~~~~~~~~----~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~- 270 (435)
T 1p22_A 197 VWDVNTGEMLN----TLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV- 270 (435)
T ss_dssp EEESSSCCEEE----EECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEE-
T ss_pred EEECCCCcEEE----EEcCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEE-
Confidence 99999886543 333333323333322 223344455677788888766533 245566666 44445665443
Q ss_pred EeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCce
Q 021291 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (314)
+|+.|+.|++||+++++.+..+. +| ...+.++. |++. ++++|+.||.|++||+++ ++++
T Consensus 271 -s~~~dg~i~vwd~~~~~~~~~~~--------~~----~~~v~~~~-~~~~------~l~~g~~dg~i~iwd~~~-~~~~ 329 (435)
T 1p22_A 271 -SASGDRTIKVWNTSTCEFVRTLN--------GH----KRGIACLQ-YRDR------LVVSGSSDNTIRLWDIEC-GACL 329 (435)
T ss_dssp -EEETTSEEEEEETTTCCEEEEEE--------CC----SSCEEEEE-EETT------EEEEEETTSCEEEEETTT-CCEE
T ss_pred -EEeCCCeEEEEECCcCcEEEEEc--------CC----CCcEEEEE-eCCC------EEEEEeCCCeEEEEECCC-CCEE
Confidence 56679999999999999998887 66 34667776 7543 899999999999999998 8899
Q ss_pred EeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
..+.+|...|.+++| ++.+|++|+.||.|++||+.+++
T Consensus 330 ~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 330 RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999999 56699999999999999997665
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.9e-30 Score=237.28 Aligned_cols=213 Identities=14% Similarity=0.109 Sum_probs=165.2
Q ss_pred ecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeC
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 93 (314)
..||.+.|++++|+|++++||+|+.||+|+||+..+.+....+. |. ..|.+++|+| + ++|++++.|++|++||+
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~--~~V~~l~fsp--g-~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DR--SAIKEMRFVK--G-IYLVVINAKDTVYVLSL 86 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SC--CCEEEEEEET--T-TEEEEEETTCEEEEEET
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CC--CCEEEEEEcC--C-CEEEEEECcCeEEEEEC
Confidence 45899999999999999999999999999999998877665543 44 5599999999 4 69999999999999999
Q ss_pred CCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCe
Q 021291 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSE 173 (314)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 173 (314)
+++++.. .+.......+ ++|+|+++.++ +|+.||.
T Consensus 87 ~~~~~~~----~~~~~~~V~~---------------------------------------v~~sp~g~~l~--sgs~dg~ 121 (902)
T 2oaj_A 87 YSQKVLT----TVFVPGKITS---------------------------------------IDTDASLDWML--IGLQNGS 121 (902)
T ss_dssp TTCSEEE----EEECSSCEEE---------------------------------------EECCTTCSEEE--EEETTSC
T ss_pred CCCcEEE----EEcCCCCEEE---------------------------------------EEECCCCCEEE--EEcCCCc
Confidence 9876432 2211111111 56889987654 5777999
Q ss_pred EEEEecCCCceeeeeccccc----CCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee
Q 021291 174 VEIWDLNTAERCTRLHQNSC----GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK 249 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~----~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 249 (314)
|++||+++++.. .+..+.. ....+| .+.+.+++ |+|++ +. .+++|+.||.| +||+++ ++++..+.
T Consensus 122 V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h----~~~V~sl~-~sp~~--~~-~l~~g~~dg~v-lWd~~~-~~~~~~~~ 190 (902)
T 2oaj_A 122 MIVYDIDRDQLS-SFKLDNLQKSSFFPAAR----LSPIVSIQ-WNPRD--IG-TVLISYEYVTL-TYSLVE-NEIKQSFI 190 (902)
T ss_dssp EEEEETTTTEEE-EEEECCHHHHHTCSSSC----CCCCCEEE-EETTE--EE-EEEEECSSCEE-EEETTT-TEEEEEEC
T ss_pred EEEEECCCCccc-cceeccccccccccccC----CCCeEEEE-EccCC--CC-EEEEEeCCCcE-EEECCC-CceEEEEe
Confidence 999999987753 1110000 011145 45788887 99962 22 89999999999 999998 77777776
Q ss_pred cC------------------CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 250 VH------------------LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 250 ~h------------------~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
.| ...|++++|+|+|.+|++++.||.|++||+++++.+.
T Consensus 191 ~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 191 YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 65 5789999999999999999999999999999887654
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=2.8e-31 Score=221.04 Aligned_cols=209 Identities=14% Similarity=0.058 Sum_probs=154.4
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe---EEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
+++..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++ ....+..|.. .|.+++|+| ++++|++++.|
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~l~~~~~d 121 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR--AATFVRWSP--NEDKFAVGSGA 121 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSS--CEEEEECCT--TSSCCEEEESS
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC--ceEEEEECC--CCCEEEEEecC
Confidence 5677888999999999999999999999999999999999876 5666777874 499999999 99999999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
+.|++||+++++... ....+.. +...... ++|+|+++.++
T Consensus 122 ~~i~iwd~~~~~~~~-~~~~~~~~h~~~v~~--------------------------------------~~~~~~~~~l~ 162 (377)
T 3dwl_C 122 RVISVCYFEQENDWW-VSKHLKRPLRSTILS--------------------------------------LDWHPNNVLLA 162 (377)
T ss_dssp SCEEECCC-----CC-CCEEECSSCCSCEEE--------------------------------------EEECTTSSEEE
T ss_pred CeEEEEEECCcccce-eeeEeecccCCCeEE--------------------------------------EEEcCCCCEEE
Confidence 999999999875311 0111111 1110000 56889886443
Q ss_pred EEeecCcCeEEEEecCCCc------------------eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 165 AVAGEQLSEVEIWDLNTAE------------------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~------------------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
+++.|+.|++||++... .+..+ + ....+.++. |+|+ ++ +|++
T Consensus 163 --~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~v~~~~-~sp~---~~-~l~~ 222 (377)
T 3dwl_C 163 --AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---------P----SGGWVHAVG-FSPS---GN-ALAY 222 (377)
T ss_dssp --EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---------C----CSSSEEEEE-ECTT---SS-CEEE
T ss_pred --EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc---------c----CCceEEEEE-ECCC---CC-EEEE
Confidence 57779999999996432 22111 2 355788888 9998 55 8999
Q ss_pred eecCCcEEEEEccCCCCc----eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 227 GYEDGSILVWDIRNPGIP----LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 227 g~~dg~i~vwd~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
++.||.|++||+++ ++. +..+.+|..+|.+++|+|++++|++++.|+.+ +|+..
T Consensus 223 ~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 223 AGHDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EETTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EeCCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999998 555 78889999999999999999999999877655 66665
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.9e-29 Score=239.55 Aligned_cols=257 Identities=16% Similarity=0.242 Sum_probs=186.8
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++.+.++.+|.+.|.+++|+|++++|++|+.||.|+|||+.+++.+..+.+|... |.+++|+|..++..+++++.|+
T Consensus 646 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 646 TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQ--VNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECSSSSCCEEEEEETTS
T ss_pred CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc--EEEEEEecCCCceEEEEEeCCC
Confidence 45778899999999999999999999999999999999999999999999999855 9999999943445899999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc------------------------
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE------------------------ 142 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 142 (314)
.|++||++++++.. .+..+........+++... ........+...+|++....
T Consensus 724 ~v~vwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 724 FLKLWDLNQKECRN--TMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp CEEEEETTSSSEEE--EECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred eEEEEECCCcchhh--eecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 99999999887543 2223333444444443322 11222233344555544332
Q ss_pred ------------------------------eeeecCCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCceeeee
Q 021291 143 ------------------------------TVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (314)
Q Consensus 143 ------------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 188 (314)
.......+|.. ++|+|++..++ +++.|+.|++||+.++..+..+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~--~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAV--IALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEE--EECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEE--EEeCCCeEEEEEcCCCceeeec
Confidence 11122223333 78888887544 5666899999999998888777
Q ss_pred cccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE-------------------------------
Q 021291 189 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD------------------------------- 237 (314)
Q Consensus 189 ~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd------------------------------- 237 (314)
. +| ...+.++. |+|+ |. ++++++.||.|++||
T Consensus 879 ~--------~h----~~~v~~v~-~spd---g~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1249)
T 3sfz_A 879 R--------GH----LSWVHGVM-FSPD---GS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVD 941 (1249)
T ss_dssp C--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEE
T ss_pred C--------CC----ccceEEEE-ECCC---CC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEec
Confidence 6 55 33555665 6665 33 556666666666665
Q ss_pred ------------------------------------------------ccCCCCceEeeecCCcceEEEEEeCCCCeEEE
Q 021291 238 ------------------------------------------------IRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 269 (314)
Q Consensus 238 ------------------------------------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 269 (314)
+.+ +..+..+.+|...|++++|+|++++|++
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s 1020 (1249)
T 3sfz_A 942 NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQFTADGKTLIS 1020 (1249)
T ss_dssp SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEECSSSSCEEE
T ss_pred CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEECCCCCEEEE
Confidence 333 4556667789999999999999999999
Q ss_pred ecCCCcEEEEecCCCeeeE
Q 021291 270 GGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 270 ~s~dg~i~iw~~~~~~~~~ 288 (314)
++.||.|++||+.+++...
T Consensus 1021 ~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 1021 SSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp ECSSSBEEEEETTTTEEEC
T ss_pred EcCCCEEEEEECCCCceEE
Confidence 9999999999999987654
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.2e-29 Score=231.16 Aligned_cols=255 Identities=17% Similarity=0.195 Sum_probs=199.1
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++.+..+.+|.++|++++|+|++++|++|+.||.|++||+.+++.+..+..|... |.+++|+| ++.+|++++.||
T Consensus 44 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~~~~~dg 119 (814)
T 3mkq_A 44 TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--IRSIAVHP--TKPYVLSGSDDL 119 (814)
T ss_dssp TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTS
T ss_pred CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC--EEEEEEeC--CCCEEEEEcCCC
Confidence 35678899999999999999999999999999999999999999999999989854 99999999 999999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc--CC
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA--EG 160 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~ 160 (314)
+|++||+.++.... ..+..+........+++............+...+|++............+.. ++|+| ++
T Consensus 120 ~i~vw~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 120 TVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp EEEEEEGGGTSEEE-EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred EEEEEECCCCceEE-EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 99999998763211 0223333444455555422223334445566778888665544333333322 88988 66
Q ss_pred CceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 161 ~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
..++ +++.|+.|++||+++++.+..+. +| ...+.++. |+|+ +. ++++++.||.|++||+.+
T Consensus 199 ~~l~--~~~~dg~i~~~d~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 199 PYMI--TASDDLTIKIWDYQTKSCVATLE--------GH----MSNVSFAV-FHPT---LP-IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp CEEE--EECTTSEEEEEETTTTEEEEEEE--------CC----SSCEEEEE-ECSS---SS-EEEEEETTSCEEEEETTT
T ss_pred CEEE--EEeCCCEEEEEECCCCcEEEEEc--------CC----CCCEEEEE-EcCC---CC-EEEEEeCCCeEEEEECCC
Confidence 6443 57779999999999999888887 56 44678887 9998 44 899999999999999998
Q ss_pred CCCceEeeecCCcceEEEEEeCCCCe-EEEecCCCcEEEEecCCCee
Q 021291 241 PGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~dg~i~iw~~~~~~~ 286 (314)
++.+..+..|...|.+++|+|++.. +++++.|+.+.+|++..+..
T Consensus 260 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 260 -YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp -CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred -CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence 8889999999999999999999874 24555677799999887654
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=232.39 Aligned_cols=261 Identities=11% Similarity=0.090 Sum_probs=174.8
Q ss_pred EecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccC----------------CcccEEEEEEcccCC
Q 021291 13 VLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHS----------------AAHGIVSVATGPSIG 75 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~ 75 (314)
.+++|.++|++++|+|+ +..|++|+.||.| +||+++++.+..+..|. +...|.+++|+| +
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp--d 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP--N 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT--T
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC--C
Confidence 35789999999999995 5789999999999 99999999998887661 114599999999 9
Q ss_pred CCeEEEeecCCeEEEEeCCCCCCCCCCee---eee-------------cceeeEEEeeeeeccc----------------
Q 021291 76 LNKVISQGRDGTVKCWDIENGGLSSNPSL---TIK-------------TNSYHFCKLSLVKEPY---------------- 123 (314)
Q Consensus 76 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~---------------- 123 (314)
+.+|++++.||+|++||+++++++....+ ..+ ........+.+...+.
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 99999999999999999988764220000 000 0011111111000000
Q ss_pred ----------------------------------------------------------------cccccCCCCcceeecc
Q 021291 124 ----------------------------------------------------------------ANAKQANEPKDCYERE 139 (314)
Q Consensus 124 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 139 (314)
.......+....|++.
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence 0000011223444443
Q ss_pred CCceeee----------------------------------------cCCCCCC----ceeccCCCceEEEeecCcCeEE
Q 021291 140 VGETVDT----------------------------------------DSLCDSK----DDVPAEGPKYMAVAGEQLSEVE 175 (314)
Q Consensus 140 ~~~~~~~----------------------------------------~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~ 175 (314)
.+..... .+.+|.. ++|+|+++. + ++|+.|++|+
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~-l-aSgs~DgtVr 460 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTA-F-ITGHSNGSVR 460 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEE-E-EEEETTSEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcE-E-EEecCCCcEE
Confidence 2211110 1223332 567888763 3 3788899999
Q ss_pred EEecCCCceee--eeccc-ccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC----------
Q 021291 176 IWDLNTAERCT--RLHQN-SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG---------- 242 (314)
Q Consensus 176 vwd~~~~~~~~--~~~~~-~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~---------- 242 (314)
+||+.++.... .+... ...-..+| ...+.+++ |+|+ |+ +||+|+.||+|+|||+.+..
T Consensus 461 lWd~~~g~~~~~~~~~~~l~~~~~~~h----~~~V~sva-fspd---g~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~ 531 (902)
T 2oaj_A 461 IYDASHGDIQDNASFEVNLSRTLNKAK----ELAVDKIS-FAAE---TL-ELAVSIETGDVVLFKYEVNQFYSVENRPES 531 (902)
T ss_dssp EEESSCCTTTTTBCEEEEHHHHTTCSS----SCCEEEEE-EETT---TT-EEEEEETTSCEEEEEEEECCC---------
T ss_pred EEECCCccccCCceEEeechhhcCCCC----CCceeEEE-ecCC---CC-eEEEEecCcEEEEEEecCccccCccccCCC
Confidence 99998874211 11100 00000023 45788998 9998 55 99999999999999997621
Q ss_pred ----------------------------------CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 243 ----------------------------------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 243 ----------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+++..+.+|.+.|++|+|+|+| +||+|+.|++|++||++++..++
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~ 610 (902)
T 2oaj_A 532 GDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIY 610 (902)
T ss_dssp ------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred cccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEE
Confidence 2367788999999999999999 99999999999999998877654
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.4e-29 Score=212.59 Aligned_cols=258 Identities=10% Similarity=0.034 Sum_probs=177.6
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCC---CCeEEEEEecc--------C--CcccEEEEEEcccCCC
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV---QHRTVSSSWVH--------S--AAHGIVSVATGPSIGL 76 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~--------~--~~~~v~~~~~~~~~~~ 76 (314)
....+ +|.+.|++++|+|++++|++|+.||.|++||++ +++.+..+..+ . ....+.++.+....++
T Consensus 104 ~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 104 SSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred eeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 34444 499999999999999999999999999999995 55544433322 1 2244777773322288
Q ss_pred CeEEEeecCCeEEEEeCCCCCCCCCCeeee--ecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC-
Q 021291 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK- 153 (314)
Q Consensus 77 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (314)
.+|++++.|+.|++||+++++... .+.. +........+++.. .........+...+|+++...........|..
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLERLQ--IIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAP 259 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCEEE--EEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeE--EEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCc
Confidence 999999999999999999887543 2222 22344444444332 22334445567888999887665544334443
Q ss_pred ---ceec----cCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCC------CC--------cCCCCCceeeeEEE
Q 021291 154 ---DDVP----AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS------PN--------FSSKGRGMCMAVQA 212 (314)
Q Consensus 154 ---~~~~----~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~~--------h~~~~~~~~~~~~~ 212 (314)
++|+ +++. ++++|+.|+.|++||+++++.+..+........ .+ ........+.+++
T Consensus 260 v~~~~~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~- 336 (437)
T 3gre_A 260 ITHVEVCQFYGKNSV--IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS- 336 (437)
T ss_dssp EEEEEECTTTCTTEE--EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE-
T ss_pred eEEEEeccccCCCcc--EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE-
Confidence 6444 4553 334788899999999999998887762110000 00 0001344577776
Q ss_pred ecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec-------------------------------------CCcce
Q 021291 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV-------------------------------------HLEPV 255 (314)
Q Consensus 213 ~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-------------------------------------h~~~v 255 (314)
|+ + ++ +|++|+.|+.|++||+++ ++.+..+.+ |...|
T Consensus 337 ~~-~---~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I 410 (437)
T 3gre_A 337 VS-N---DK-ILLTDEATSSIVMFSLNE-LSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDII 410 (437)
T ss_dssp EE-T---TE-EEEEEGGGTEEEEEETTC-GGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCE
T ss_pred EC-C---ce-EEEecCCCCeEEEEECCC-cccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccce
Confidence 88 4 33 899999999999999998 666666654 88999
Q ss_pred EEEEEeCC--CCeEEEecCCCcEEEEe
Q 021291 256 LCLSIDES--CNGGISGGADQKIVLYN 280 (314)
Q Consensus 256 ~~~~~~~~--~~~l~s~s~dg~i~iw~ 280 (314)
++++|.++ +.+|++|+.||.|+||+
T Consensus 411 ~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 411 NSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eeEeeeccCCceEEEEEcCCceEEEeC
Confidence 99999877 78999999999999995
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=7.3e-29 Score=211.05 Aligned_cols=245 Identities=18% Similarity=0.297 Sum_probs=191.0
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
.++++..+.+|...|.+++|+ +++|++|+.||.|++||+.+++.+..+.+|... |.+++| +++.+++++.||
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~--v~~~~~----~~~~l~~~~~dg 259 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA--VRCVQY----DGRRVVSGAYDF 259 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSC--EEEEEE----CSSCEEEEETTS
T ss_pred cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc--EEEEEE----CCCEEEEEcCCC
Confidence 346788999999999999995 568999999999999999999999999999854 999999 348999999999
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC--ceeccCCCceE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYM 164 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 164 (314)
.|++||+++++... .+..+......+.. ...........+...+|++....... .+.+|.. .++.++++.+
T Consensus 260 ~i~iwd~~~~~~~~----~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~l- 332 (445)
T 2ovr_B 260 MVKVWDPETETCLH----TLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIH-TLTGHQSLTSGMELKDNIL- 332 (445)
T ss_dssp CEEEEEGGGTEEEE----EECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEE-EECCCCSCEEEEEEETTEE-
T ss_pred EEEEEECCCCcEeE----EecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEE-EEcCCcccEEEEEEeCCEE-
Confidence 99999999876533 33333322333333 22233344456678888888776544 3445555 5566666543
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
+ +|+.||.|++||+++++.+..+. ++. .....+.++. |++. ++++|+.||.|++||+++ ++.
T Consensus 333 ~-~~~~dg~i~vwd~~~~~~~~~~~--------~~~-~~~~~v~~~~-~~~~------~l~s~~~dg~v~iwd~~~-~~~ 394 (445)
T 2ovr_B 333 V-SGNADSTVKIWDIKTGQCLQTLQ--------GPN-KHQSAVTCLQ-FNKN------FVITSSDDGTVKLWDLKT-GEF 394 (445)
T ss_dssp E-EEETTSCEEEEETTTCCEEEEEC--------STT-SCSSCEEEEE-ECSS------EEEEEETTSEEEEEETTT-CCE
T ss_pred E-EEeCCCeEEEEECCCCcEEEEEc--------cCC-CCCCCEEEEE-ECCC------EEEEEeCCCeEEEEECCC-Cce
Confidence 3 57779999999999999888887 321 1355788887 8754 899999999999999998 777
Q ss_pred eEee-----ecCCcceEEEEEeCCCCeEEEecCCCc----EEEEecCCC
Q 021291 245 LTAM-----KVHLEPVLCLSIDESCNGGISGGADQK----IVLYNLDHS 284 (314)
Q Consensus 245 ~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~dg~----i~iw~~~~~ 284 (314)
+..+ .+|...|++++|+|++.+|++|+.||. |.+||++..
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 8777 478889999999999999999999998 999999864
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.7e-29 Score=210.84 Aligned_cols=212 Identities=10% Similarity=0.052 Sum_probs=164.6
Q ss_pred EecCCCCceeEEEEccCCCEE-EEecCCCeEEEEeCC--CCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEE
Q 021291 13 VLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 89 (314)
...+|.+.|++++|+|++++| ++|+.||.|+|||+. +++.+..+..+.....|.+++|+| ++++|++++.||.|+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIADKFGDVY 174 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC--CCCEEEEEeCCCcEE
Confidence 345788899999999999996 899999999999999 888888887544336699999999 999999999999999
Q ss_pred EEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccC---CCceEEE
Q 021291 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE---GPKYMAV 166 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 166 (314)
+|++.+++....+...+..+...... ++|+|+ ++. ++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~--------------------------------------~~~sp~~~~~~~-l~- 214 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTD--------------------------------------VHLIKDSDGHQF-II- 214 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEE--------------------------------------EEEEECTTSCEE-EE-
T ss_pred EEecCCcccccccceeeecccCceEE--------------------------------------EEEcCCCCCCcE-EE-
Confidence 99998876432111111111111000 568888 543 33
Q ss_pred eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceE
Q 021291 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (314)
Q Consensus 167 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (314)
+|+.|+.|++||+++++.+..+.. +| ...+.++. |+ + +. +|++|+.|+.|++||+++ ++++.
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~-------~h----~~~v~~~~-~s-d---~~-~l~s~~~d~~v~vwd~~~-~~~~~ 276 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLF-------GH----KHFVSSIC-CG-K---DY-LLLSAGGDDKIFAWDWKT-GKNLS 276 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECC-------CC----SSCEEEEE-EC-S---TT-EEEEEESSSEEEEEETTT-CCEEE
T ss_pred EEcCCCcEEEEECCCCceeeeeec-------CC----CCceEEEE-EC-C---CC-EEEEEeCCCeEEEEECCC-CcEee
Confidence 677799999999999988777432 55 45788887 99 6 55 899999999999999998 77777
Q ss_pred eeecC-------------------------CcceEEEEEeCCCCeEEEec-CCCcEEEEec--CCC
Q 021291 247 AMKVH-------------------------LEPVLCLSIDESCNGGISGG-ADQKIVLYNL--DHS 284 (314)
Q Consensus 247 ~~~~h-------------------------~~~v~~~~~~~~~~~l~s~s-~dg~i~iw~~--~~~ 284 (314)
.+..+ ...|.+++|+|++++|++++ .|+.|++|++ ..+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 277 TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 77632 35799999999999999998 8999999999 554
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-30 Score=211.38 Aligned_cols=214 Identities=11% Similarity=0.039 Sum_probs=159.3
Q ss_pred EccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeee
Q 021291 26 FHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLT 105 (314)
Q Consensus 26 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 105 (314)
+.+++.+|++|+.||+|++||+.+++.+..+. . ..|.++.|+| + +++++.|++|++|+...... .+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~--~~v~~~~~~~--~---~~s~s~D~~i~~w~~~~~~~----~~~ 110 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--T--PNPRTGGEHP--A---IISRGPCNRLLLLYPGNQIT----ILD 110 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--E--ECCCTTCCCC--S---EEEECSTTEEEEEETTTEEE----EEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--c--CCceeeeeCC--c---eEEecCCCeEEEEEccCceE----Eee
Confidence 34578899999999999999999999888876 2 4488999999 5 99999999999998874210 001
Q ss_pred eecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceecc--CCCceEEEeecCcCeEEEEec
Q 021291 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA--EGPKYMAVAGEQLSEVEIWDL 179 (314)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~g~~d~~i~vwd~ 179 (314)
... ...+.....+|.. ++|+| +++.++ +++.|++|++||+
T Consensus 111 ~~~--------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~--s~s~dg~i~~wd~ 156 (343)
T 3lrv_A 111 SKT--------------------------------NKVLREIEVDSANEIIYMYGHNEVNTEYFI--WADNRGTIGFQSY 156 (343)
T ss_dssp TTT--------------------------------CCEEEEEECCCSSCEEEEECCC---CCEEE--EEETTCCEEEEES
T ss_pred cCC--------------------------------cceeEEeecCCCCCEEEEEcCCCCCCCEEE--EEeCCCcEEEEEC
Confidence 100 0000001111111 67888 776443 6777999999999
Q ss_pred CCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCce-Eeeec-CCcceEE
Q 021291 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TAMKV-HLEPVLC 257 (314)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~-~~~~~-h~~~v~~ 257 (314)
++++....+. .+ ....+.++. |+|+ |. +|++|+.||.|++||+++ ++.+ ..+.. |..+|++
T Consensus 157 ~~~~~~~~~~--------~~---~~~~i~~~~-~~pd---g~-~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~ 219 (343)
T 3lrv_A 157 EDDSQYIVHS--------AK---SDVEYSSGV-LHKD---SL-LLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIKE 219 (343)
T ss_dssp SSSCEEEEEC--------CC---SSCCCCEEE-ECTT---SC-EEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEEE
T ss_pred CCCcEEEEEe--------cC---CCCceEEEE-ECCC---CC-EEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEEE
Confidence 9998866554 22 233577887 9998 55 999999999999999998 5555 77887 9999999
Q ss_pred EEEeCCCCeEEEecCCCcEEEEecCCCeeeEee----------e--eeeecCCCceece
Q 021291 258 LSIDESCNGGISGGADQKIVLYNLDHSTYVLFG----------I--GFVCDQEGNKFGT 304 (314)
Q Consensus 258 ~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~----------~--~~~~~~~~~~~~~ 304 (314)
++|+|++.+|++++ |+.|++||+++++.+..+ . .++++|+|..+++
T Consensus 220 l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 220 VKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp EEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred EEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 99999999999999 559999999988765321 1 2778888887766
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.3e-28 Score=215.96 Aligned_cols=256 Identities=16% Similarity=0.202 Sum_probs=195.4
Q ss_pred CceEEecCCCCc-eeEEEEcc--CCCEEEEecCCCeEEEEeCCCC--------eEEEEEeccCCcccEEEEEEcccCCCC
Q 021291 9 DPVAVLRGHRAS-VTDVCFHQ--TKPILFAGTTGGELRIWDTVQH--------RTVSSSWVHSAAHGIVSVATGPSIGLN 77 (314)
Q Consensus 9 ~~~~~l~~h~~~-v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 77 (314)
+++..+.+|.+. |++++|+| ++++|++|+.||.|++||+.++ +.+..+..|.. .|.+++|+| +++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~--~~~ 129 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG--PISDISWDF--EGR 129 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS--CEEEEEECT--TSS
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc--cEEEEEEeC--CCC
Confidence 789999999999 99999999 9999999999999999999754 66777777874 499999999 999
Q ss_pred eEEEeecC----CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCC-
Q 021291 78 KVISQGRD----GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS- 152 (314)
Q Consensus 78 ~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (314)
+|++++.+ +.|++||. ++... .+..+........+++............+...+|++...+..........
T Consensus 130 ~l~~~~~~~~~~~~v~~~d~--~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 205 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWDS--GNSLG--EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ 205 (615)
T ss_dssp EEEEEECCSSCSEEEEETTT--CCEEE--ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT
T ss_pred EEEEeccCCCCccEEEEEEC--CCcce--eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCC
Confidence 99999988 78999983 32221 22233334444555544433444555567778888777665443332222
Q ss_pred --C---ceeccC-CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 153 --K---DDVPAE-GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 153 --~---~~~~~~-~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
. ++|+|+ ++.++ +++.|+.|++||+++++.+..+.. . .......+.++. |+ + +. +|++
T Consensus 206 ~~~v~~~~~~~~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~-------~-~~~~~~~v~~~~-~~-~---~~-~l~~ 269 (615)
T 1pgu_A 206 GSFVRDVEFSPDSGEFVI--TVGSDRKISCFDGKSGEFLKYIED-------D-QEPVQGGIFALS-WL-D---SQ-KFAT 269 (615)
T ss_dssp TCCEEEEEECSTTCCEEE--EEETTCCEEEEETTTCCEEEECCB-------T-TBCCCSCEEEEE-ES-S---SS-EEEE
T ss_pred CceEEEEEECCCCCCEEE--EEeCCCeEEEEECCCCCEeEEecc-------c-ccccCCceEEEE-Ec-C---CC-EEEE
Confidence 3 899999 76444 566689999999999998887721 0 001355788887 98 6 44 8999
Q ss_pred eecCCcEEEEEccCCCCceEeeecC----CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 227 GYEDGSILVWDIRNPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 227 g~~dg~i~vwd~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
++.|+.|++||+++ ++.+..+..+ ...+.++.|. ++.++++++.||.|++||+.+++.+...
T Consensus 270 ~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 270 VGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp EETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred EcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE
Confidence 99999999999998 7888888876 4678888886 7889999999999999999987776654
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-28 Score=207.92 Aligned_cols=212 Identities=9% Similarity=0.039 Sum_probs=160.9
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe---EEEEEeccCC---------------------------------
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSA--------------------------------- 61 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~--------------------------------- 61 (314)
..++.+++|+++|++|+++ .++.|++||+.+++ .+..+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999976665 57799999999988 6665553321
Q ss_pred -------------------cccEEEEEEcccCCCCeE-EEeecCCeEEEEeCC--CCCCCCCCeeeeecceeeEEEeeee
Q 021291 62 -------------------AHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIE--NGGLSSNPSLTIKTNSYHFCKLSLV 119 (314)
Q Consensus 62 -------------------~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (314)
...|.+++|+| ++++| ++++.||+|++||+. +++... .+...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~v~~---- 154 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLK--LRKRFCFSKRPNA---- 154 (450)
T ss_dssp -----------------CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEE--EEEEEECSSCEEE----
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceee--eeecccCCCCceE----
Confidence 01499999999 99986 899999999999998 665432 1111111111100
Q ss_pred eccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceee----eecccccCC
Q 021291 120 KEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT----RLHQNSCGG 195 (314)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~----~~~~~~~~~ 195 (314)
++|+|+++.++ +|+.|+.|++|++.+++... .+.
T Consensus 155 ----------------------------------~~~sp~~~~l~--~~~~~g~v~~~~~~~~~~~~~~~~~~~------ 192 (450)
T 2vdu_B 155 ----------------------------------ISIAEDDTTVI--IADKFGDVYSIDINSIPEEKFTQEPIL------ 192 (450)
T ss_dssp ----------------------------------EEECTTSSEEE--EEETTSEEEEEETTSCCCSSCCCCCSE------
T ss_pred ----------------------------------EEEcCCCCEEE--EEeCCCcEEEEecCCcccccccceeee------
Confidence 56999987554 46668999999998876543 444
Q ss_pred CCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEe-eecCCcceEEEEEeCCCCeEEEecCCC
Q 021291 196 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA-MKVHLEPVLCLSIDESCNGGISGGADQ 274 (314)
Q Consensus 196 ~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg 274 (314)
+| ...+.++. |+|+...++ +|++|+.|+.|++||+++ +..+.. +.+|...|++++|+ ++.+|++++.|+
T Consensus 193 --~h----~~~v~~~~-~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~ 262 (450)
T 2vdu_B 193 --GH----VSMLTDVH-LIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD 262 (450)
T ss_dssp --EC----SSCEEEEE-EEECTTSCE-EEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSS
T ss_pred --cc----cCceEEEE-EcCCCCCCc-EEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCC
Confidence 45 45788887 999711133 899999999999999998 666766 66999999999999 999999999999
Q ss_pred cEEEEecCCCeeeEee
Q 021291 275 KIVLYNLDHSTYVLFG 290 (314)
Q Consensus 275 ~i~iw~~~~~~~~~~~ 290 (314)
.|++||+.+++.+...
T Consensus 263 ~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 263 KIFAWDWKTGKNLSTF 278 (450)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEeeee
Confidence 9999999999876543
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.6e-28 Score=201.62 Aligned_cols=242 Identities=12% Similarity=0.061 Sum_probs=182.1
Q ss_pred ceEEecCCCCceeEEEEccCCC-EEEEecCCCeEEEEeC-CCCeEEEEEec--cCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 10 PVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDT-VQHRTVSSSWV--HSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~-~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
+...+.+|...|++++|+|+++ +|++|+.||.|++||+ .+++. ..+.. |. ..|.+++|+| ++.|++++.|
T Consensus 48 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~--~~v~~l~~~~---~~~l~s~~~d 121 (342)
T 1yfq_A 48 DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEAN--LGICRICKYG---DDKLIAASWD 121 (342)
T ss_dssp EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCC--SCEEEEEEET---TTEEEEEETT
T ss_pred cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCC--CceEEEEeCC---CCEEEEEcCC
Confidence 3566778999999999999999 9999999999999999 77655 66777 77 4599999998 4899999999
Q ss_pred CeEEEEeCCC---------CCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC-Cce-eeecCCCCCC-
Q 021291 86 GTVKCWDIEN---------GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GET-VDTDSLCDSK- 153 (314)
Q Consensus 86 g~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~- 153 (314)
+.|++||+++ ++... .+. .........++... .......+...+|++.. ... .......+..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~--~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 195 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSN--NTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ 195 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSS--SSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSC
T ss_pred CeEEEEcccccccccccccCCeee--EEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCc
Confidence 9999999987 65443 222 22223333333222 33344455677788776 432 2222223333
Q ss_pred ---ceecc-CCCceEEEeecCcCeEEEEecCCC------ceeeeecccccCCCCCcCC-----CCCceeeeEEEecCCCC
Q 021291 154 ---DDVPA-EGPKYMAVAGEQLSEVEIWDLNTA------ERCTRLHQNSCGGSPNFSS-----KGRGMCMAVQAYLPSKS 218 (314)
Q Consensus 154 ---~~~~~-~~~~~~~~~g~~d~~i~vwd~~~~------~~~~~~~~~~~~~~~~h~~-----~~~~~~~~~~~~~p~~~ 218 (314)
++|+| +++.++ +++.||.|++||++.. +....+. .|.. .....+.++. |+|+
T Consensus 196 i~~i~~~~~~~~~l~--~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~~~-~s~~-- 262 (342)
T 1yfq_A 196 IRDVALLPKEQEGYA--CSSIDGRVAVEFFDDQGDDYNSSKRFAFR--------CHRLNLKDTNLAYPVNSIE-FSPR-- 262 (342)
T ss_dssp EEEEEECSGGGCEEE--EEETTSEEEEEECCTTCCSTTCTTCEEEE--------CCCCCTTCCSSCCCEEEEE-ECTT--
T ss_pred eeEEEECCCCCCEEE--EEecCCcEEEEEEcCCCcccccccceeee--------cccccccccccceeEEEEE-EcCC--
Confidence 88999 886544 5666999999999876 6666666 4433 1234788887 9998
Q ss_pred CCceEEEEeecCCcEEEEEccCCCCceEeeecC-CcceEEEEEeCCCCeEEEecCCCc-EEEEec
Q 021291 219 QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISGGADQK-IVLYNL 281 (314)
Q Consensus 219 ~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~dg~-i~iw~~ 281 (314)
++ +|++|+.||.|++||+++ ++++..+.+| ..+|++++ +++.+|++++.||. .+.|..
T Consensus 263 -~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 263 -HK-FLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp -TC-CEEEEETTSCEEEEETTT-TEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred -CC-EEEEecCCceEEEEcCcc-HhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 44 899999999999999998 8889999998 99999999 99999999999998 666664
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4e-27 Score=196.93 Aligned_cols=252 Identities=11% Similarity=0.055 Sum_probs=187.1
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-Eeec
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGR 84 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~ 84 (314)
.++.++.+.+|.. +.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+| ++++|+ +++.
T Consensus 21 ~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~sp--dg~~l~~~~~~ 94 (391)
T 1l0q_A 21 SNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---SPQGVAVSP--DGKQVYVTNMA 94 (391)
T ss_dssp TTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEETT
T ss_pred CCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---CccceEECC--CCCEEEEEECC
Confidence 3466777887754 8999999999876 678899999999999999998887664 499999999 888775 5556
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---ceeccCCC
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGP 161 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 161 (314)
++.|++||+.+++... .+... .......+++................+|++...+..... ..+.. ++|+|+++
T Consensus 95 ~~~v~v~d~~~~~~~~--~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~dg~ 170 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVAG--TVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV-SVGRSPKGIAVTPDGT 170 (391)
T ss_dssp TTEEEEEETTTTEEEE--EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECCSSEEEEEECTTSS
T ss_pred CCEEEEEECCCCeEEE--EEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE-ecCCCcceEEECCCCC
Confidence 7999999999886533 22211 122333344333323233344566777777766544332 22333 89999998
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee---cCCcEEEEEc
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY---EDGSILVWDI 238 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~---~dg~i~vwd~ 238 (314)
.+++ +++.|+.|++||+++++....+.. ...+.++. |+|+ |+ ++++++ .++.|++||+
T Consensus 171 ~l~~-~~~~~~~v~~~d~~~~~~~~~~~~-------------~~~~~~~~-~~~~---g~-~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 171 KVYV-ANFDSMSISVIDTVTNSVIDTVKV-------------EAAPSGIA-VNPE---GT-KAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEE-EETTTTEEEEEETTTTEEEEEEEC-------------SSEEEEEE-ECTT---SS-EEEEEEECSSCCEEEEEET
T ss_pred EEEE-EeCCCCEEEEEECCCCeEEEEEec-------------CCCccceE-ECCC---CC-EEEEEecCcCCCcEEEEEC
Confidence 7655 566689999999999988777651 33567777 9998 55 666666 6899999999
Q ss_pred cCCCCceEeeecCCcceEEEEEeCCCCeE-EEecCCCcEEEEecCCCeeeEe
Q 021291 239 RNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 239 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
++ ++++..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..
T Consensus 232 ~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 232 GT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp TT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 98 77788887765 57899999999877 6778999999999999887654
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=6.3e-29 Score=208.71 Aligned_cols=211 Identities=19% Similarity=0.256 Sum_probs=163.4
Q ss_pred CceEEecCCCCceeEEEEccCC-CEEEEecCCCeEEEEeCCCCeEEEEE--eccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSS--WVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
+++..+.+|...|.+++|+|++ ++|++|+.||.|++||+.+++.+..+ ..|. ..|.+++|+| ++++|++++.|
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d 197 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP--DTIYSVDWSR--DGALICTSCRD 197 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC--SCEEEEEECT--TSSCEEEEETT
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC--CceEEEEECC--CCCEEEEEecC
Confidence 6788999999999999999997 69999999999999999999999998 6777 4499999999 99999999999
Q ss_pred CeEEEEeCCCCCCCCCCeeee-eccee--eEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCc
Q 021291 86 GTVKCWDIENGGLSSNPSLTI-KTNSY--HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
|.|++||+++++... .+ ..+.. ... ++|+|++.
T Consensus 198 ~~i~iwd~~~~~~~~----~~~~~~~~~~~~~---------------------------------------~~~~~~~~- 233 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVA----EKDRPHEGTRPVH---------------------------------------AVFVSEGK- 233 (402)
T ss_dssp SEEEEEETTTTEEEE----EEECSSCSSSCCE---------------------------------------EEECSTTE-
T ss_pred CcEEEEeCCCCceee----eeccCCCCCcceE---------------------------------------EEEcCCCc-
Confidence 999999999875422 22 11110 000 56888875
Q ss_pred eEEEee---cCcCeEEEEecCCCce-eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEc
Q 021291 163 YMAVAG---EQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (314)
Q Consensus 163 ~~~~~g---~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (314)
+++ +| +.|+.|++||+++++. ...... .| ...+.++. |+|+ ++.++++|+.||.|++||+
T Consensus 234 ~l~-~g~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~----~~~v~~~~-~s~~---~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 234 ILT-TGFSRMSERQVALWDTKHLEEPLSLQEL-------DT----SSGVLLPF-FDPD---TNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp EEE-EEECTTCCEEEEEEETTBCSSCSEEEEC-------CC----CSSCEEEE-EETT---TTEEEEEETTCSCEEEEEE
T ss_pred EEE-EeccCCCCceEEEEcCccccCCceEEec-------cC----CCceeEEE-EcCC---CCEEEEEEcCCCeEEEEEe
Confidence 333 55 6789999999998765 222221 22 33577777 9998 5534456778999999999
Q ss_pred cCCCCc-eEeeecC--CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 239 RNPGIP-LTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 239 ~~~~~~-~~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.+ +++ +..+..| ..+|.+++|+|++.++++ .++.+++|++.+++.
T Consensus 298 ~~-~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 298 TS-EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp CS-STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred cC-CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 98 443 6566554 589999999999987764 567999999998764
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.3e-28 Score=203.88 Aligned_cols=229 Identities=8% Similarity=0.055 Sum_probs=166.9
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCC---cccEEEEEEcccCCCCeEEEeecCCeEEEEe
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 92 (314)
+|.+.|.+++|+|+|.+||+++.||.|+|||.+. ++..+. |.. ...|.+++|+| +|++|++|+.||+|+|||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP--DG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP--IESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS--SSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC--CCCEEEEEcCCCEEEEEE
Confidence 5688999999999999999999999999999543 666666 542 12499999999 999999999999999999
Q ss_pred CCCCCCCCCC---eeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC----ceeccCCCceEE
Q 021291 93 IENGGLSSNP---SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMA 165 (314)
Q Consensus 93 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (314)
+.++.+.... +.+++.. ..+|.. ++|+|+| ++
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~--------------------------------------~~gh~~~V~sVawSPdg---La 196 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLS--------------------------------------DAGSKDWVTHIVWYEDV---LV 196 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECS--------------------------------------CTTCCCCEEEEEEETTE---EE
T ss_pred CCCCccccccceeeeeeecc--------------------------------------cccccccEEEEEEcCCc---EE
Confidence 9987532100 1111110 011111 6799998 33
Q ss_pred EeecCcCeEEEEecCCCcee---eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 166 VAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
+++.|++|++||+.++... .++.. +| ...+.+++ |+ + . .+++++ ++.|++||+.. +
T Consensus 197 -ass~D~tVrlWd~~~~~~~~~~~tL~~-------~h----~~~V~sva-Fs-g----~-~LASa~-~~tIkLWd~~~-~ 255 (588)
T 2j04_A 197 -AALSNNSVFSMTVSASSHQPVSRMIQN-------AS----RRKITDLK-IV-D----Y-KVVLTC-PGYVHKIDLKN-Y 255 (588)
T ss_dssp -EEETTCCEEEECCCSSSSCCCEEEEEC-------CC----SSCCCCEE-EE-T----T-EEEEEC-SSEEEEEETTT-T
T ss_pred -EEeCCCeEEEEECCCCccccceeeecc-------cc----cCcEEEEE-EE-C----C-EEEEEe-CCeEEEEECCC-C
Confidence 3455899999999887732 34531 34 45678887 98 2 2 788887 69999999996 5
Q ss_pred CceEeeecCCcceEEEEE--eCCCCeEEEecCCCcEEEEecCCCe-----------------------e------eEeee
Q 021291 243 IPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLDHST-----------------------Y------VLFGI 291 (314)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~dg~i~iw~~~~~~-----------------------~------~~~~~ 291 (314)
+......+|.+.|.+++| +|++..|++++.||+ ++|..+.-. . .+.+.
T Consensus 256 ~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~ 334 (588)
T 2j04_A 256 SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIH 334 (588)
T ss_dssp EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEE
T ss_pred eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEE
Confidence 443333389999999999 999999999999999 888864110 0 11245
Q ss_pred eeeecCCCceeceeeccccccC
Q 021291 292 GFVCDQEGNKFGTTWHIRHLNS 313 (314)
Q Consensus 292 ~~~~~~~~~~~~~~w~~~~~~~ 313 (314)
+.+++|+|..++....+ +.|+
T Consensus 335 ~va~SPdG~~lA~~~~i-~~~~ 355 (588)
T 2j04_A 335 GISLSPDGYSIAIVYDM-ERVA 355 (588)
T ss_dssp EEEECTTSSEEEEEEEE-ECSS
T ss_pred EEEECCCCCEEEEEEec-cCce
Confidence 57788888888887666 5553
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-27 Score=198.41 Aligned_cols=262 Identities=8% Similarity=0.031 Sum_probs=178.1
Q ss_pred CCceeEEEEccCCCEEEEecCCC-------eEEEEeCCCCe--------EEE--EEeccCCcccEEEEEEcccCCCCeEE
Q 021291 18 RASVTDVCFHQTKPILFAGTTGG-------ELRIWDTVQHR--------TVS--SSWVHSAAHGIVSVATGPSIGLNKVI 80 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg-------~v~iwd~~~~~--------~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (314)
.-||++++|+||+++|++|+.|. .|++|++..+. ... .+..|. ..|.++++.. +.++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~~v~s~~~~~----~~~~ 87 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--DSPTAIDASK----GIIL 87 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--CCCCEEEEET----TEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--CceEEEEeCC----CEEE
Confidence 45899999999999999987543 59999987542 112 344555 4588888765 4555
Q ss_pred Ee-----------ecCCeEEEEeCCCCCCCCCCeeeee-------cceeeEEEeeeeecccccc-ccCCCCcceeeccCC
Q 021291 81 SQ-----------GRDGTVKCWDIENGGLSSNPSLTIK-------TNSYHFCKLSLVKEPYANA-KQANEPKDCYEREVG 141 (314)
Q Consensus 81 s~-----------~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 141 (314)
++ +.|+++++|++.......+...... ......+.|++.+...... ....+...+|++...
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 54 4578899999876542111111111 0112344555554443322 223456788888877
Q ss_pred ceeeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCC
Q 021291 142 ETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (314)
Q Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~ 218 (314)
....... .+.. ++|+|+|+.++ +++ ++.+.+|+..+++.+...... +| ...+.++. |+|+
T Consensus 168 ~~~~~~~-~~~~V~~v~fspdg~~l~--s~s-~~~~~~~~~~~~~~~~~~~~~------~~----~~~v~~v~-fspd-- 230 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFSTDGKVVA--YIT-GSSLEVISTVTGSCIARKTDF------DK----NWSLSKIN-FIAD-- 230 (365)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSSEEE--EEC-SSCEEEEETTTCCEEEEECCC------CT----TEEEEEEE-EEET--
T ss_pred cEEEEeC-CCCceEEEEEccCCceEE--ecc-ceeEEEEEeccCcceeeeecC------CC----CCCEEEEE-EcCC--
Confidence 6554432 2222 99999997544 455 466788888777765443310 33 45678887 9998
Q ss_pred CCceEEEEeecCC----cEEEEEccCCCC---ceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe--
Q 021291 219 QGFVNVLAGYEDG----SILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF-- 289 (314)
Q Consensus 219 ~g~~~l~~g~~dg----~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-- 289 (314)
+. ++++++.|+ .+++||+..... ....+.+|..+|++++|+|+|++||+|+.|+.|+|||+++++.+..
T Consensus 231 -g~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~ 308 (365)
T 4h5i_A 231 -DT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK 308 (365)
T ss_dssp -TE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred -CC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence 55 888888777 688899876222 2345778999999999999999999999999999999999988764
Q ss_pred ------eeeeeecCCCceece
Q 021291 290 ------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 290 ------~~~~~~~~~~~~~~~ 304 (314)
+..++++|+|..+++
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEE
T ss_pred CcccCCEEEEEECCCCCEEEE
Confidence 345678899988776
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-28 Score=206.42 Aligned_cols=217 Identities=6% Similarity=0.054 Sum_probs=157.4
Q ss_pred cCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeE-----------------------------EEEEe-ccCCccc
Q 021291 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT-----------------------------VSSSW-VHSAAHG 64 (314)
Q Consensus 15 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-----------------------------~~~~~-~~~~~~~ 64 (314)
+.-...|.+++|+|||+++||++.|++|+ |...++. ...+. .|. ..
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~--~~ 87 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPV--CY 87 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCS--CC
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCC--Cc
Confidence 45568999999999999999999999995 4333221 11111 233 56
Q ss_pred EEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeee-cc-----eeeEEEeeeeeccccccccCCCCcceeec
Q 021291 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK-TN-----SYHFCKLSLVKEPYANAKQANEPKDCYER 138 (314)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (314)
|.+++|+| +|..|++++.||+|++||.++ + ...+. .. ... +
T Consensus 88 V~~vawSP--dG~~LAs~s~dg~V~iwd~~~--~----l~~l~~~~~~~~~sv~-s------------------------ 134 (588)
T 2j04_A 88 PRVCKPSP--IDDWMAVLSNNGNVSVFKDNK--M----LTNLDSKGNLSSRTYH-C------------------------ 134 (588)
T ss_dssp EEEEEECS--SSSCEEEEETTSCEEEEETTE--E----EEECCCSSCSTTTCEE-E------------------------
T ss_pred EEEEEECC--CCCEEEEEeCCCcEEEEeCCc--e----eeeccCCCccccccEE-E------------------------
Confidence 99999999 999999999999999999543 1 11111 10 011 1
Q ss_pred cCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCce-------eeeecccccCCCCCcCCCCCceeeeEE
Q 021291 139 EVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER-------CTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~-------~~~~~~~~~~~~~~h~~~~~~~~~~~~ 211 (314)
++|+|+|+.++ +|+.||+|++||+.++.. +.++. .|...+...+.+++
T Consensus 135 ---------------vafSPDG~~LA--sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~--------~~~~gh~~~V~sVa 189 (588)
T 2j04_A 135 ---------------FEWNPIESSIV--VGNEDGELQFFSIRKNSENTPEFYFESSIR--------LSDAGSKDWVTHIV 189 (588)
T ss_dssp ---------------EEECSSSSCEE--EEETTSEEEEEECCCCTTTCCCCEEEEEEE--------CSCTTCCCCEEEEE
T ss_pred ---------------EEEcCCCCEEE--EEcCCCEEEEEECCCCccccccceeeeeee--------cccccccccEEEEE
Confidence 67999998655 577799999999998753 45554 33333456899998
Q ss_pred EecCCCCCCceEEEEeecCCcEEEEEccCCCC---ceEee-ecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeee
Q 021291 212 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI---PLTAM-KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 212 ~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~---~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
|+|+ | +++++.|+.|++||+.. +. ...++ .+|...|.+++|+ +..|++++ ++.|++||+..++..
T Consensus 190 -wSPd---g---Laass~D~tVrlWd~~~-~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 190 -WYED---V---LVAALSNNSVFSMTVSA-SSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSIS 258 (588)
T ss_dssp -EETT---E---EEEEETTCCEEEECCCS-SSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEE
T ss_pred -EcCC---c---EEEEeCCCeEEEEECCC-CccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEE
Confidence 9997 4 78888999999999987 44 23566 4888999999999 57889887 699999999988873
Q ss_pred Eee-------eeeee--cCCCceece
Q 021291 288 LFG-------IGFVC--DQEGNKFGT 304 (314)
Q Consensus 288 ~~~-------~~~~~--~~~~~~~~~ 304 (314)
... ..+++ +|++..++.
T Consensus 259 ~~~~gh~~~V~~va~~~s~d~~~La~ 284 (588)
T 2j04_A 259 SLKTGSLENFHIIPLNHEKESTILLM 284 (588)
T ss_dssp EEECSCCSCCCEEEETTCSSCEEEEE
T ss_pred EEEcCCCceEEEEEeeeCCCCCEEEE
Confidence 322 22345 677655544
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.3e-28 Score=206.00 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=142.9
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEE-----EEeccCCcccEEEEEEccc------CCCCeEEEeecC
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-----SSWVHSAAHGIVSVATGPS------IGLNKVISQGRD 85 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~------~~~~~l~s~~~d 85 (314)
|...+....+.+++.+|++|+.|++|+|||+++++... .+.+|.. .|.+++|+|. .++++|++++.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~--~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN--FVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS--CEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC--ceEEEEEccccccccCCCCCEEEEEECC
Confidence 44444444555577789999999999999999886543 2457774 4999999872 257899999999
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecce-eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
++|+|||++++.... ....+. ...+ ++|+|++..++
T Consensus 166 ~tv~~Wd~~~~~~~~----~~~~~~~~v~~---------------------------------------v~~~p~~~~~l 202 (393)
T 4gq1_A 166 CTLIIWRLTDEGPIL----AGYPLSSPGIS---------------------------------------VQFRPSNPNQL 202 (393)
T ss_dssp SEEEEEEEETTEEEE----EEEECSSCEEE---------------------------------------EEEETTEEEEE
T ss_pred CeEEEEECCCCceee----eecCCCCCcEE---------------------------------------EEECCCCCceE
Confidence 999999998764321 111111 1111 56899887666
Q ss_pred EEeecCcCeEEEEecCCCceeeeeccccc-------------CCCCCcCCCCCceeeeEEEec-CCCCCCceEEEEeecC
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSC-------------GGSPNFSSKGRGMCMAVQAYL-PSKSQGFVNVLAGYED 230 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~-------------~~~~~h~~~~~~~~~~~~~~~-p~~~~g~~~l~~g~~d 230 (314)
+ +|+.|++|++||+++++.......... .............+.++. |. |+ +. .+++++.|
T Consensus 203 ~-~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~-~~~~d---g~-~l~s~s~d 276 (393)
T 4gq1_A 203 I-VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR-WIGSD---GS-GILAMCKS 276 (393)
T ss_dssp E-EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE-EETTT---TC-EEEEECTT
T ss_pred E-ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee-eecCC---CC-EEEEEeCC
Confidence 5 677799999999998765443321000 000000111234556666 65 55 55 89999999
Q ss_pred CcEEEEEccCCCCceEeeecCCcceEEEEEe--------------------CCCCeEEEecCCCcEEEEecCCCeeeEe-
Q 021291 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSID--------------------ESCNGGISGGADQKIVLYNLDHSTYVLF- 289 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~--------------------~~~~~l~s~s~dg~i~iw~~~~~~~~~~- 289 (314)
+.+++||+.. ++....+..|...+..+.+. .++.++++|+.||.|++||+.+++....
T Consensus 277 ~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~ 355 (393)
T 4gq1_A 277 GAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP 355 (393)
T ss_dssp SEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE
T ss_pred CCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe
Confidence 9999999987 55555555555544444332 2455778899999999999999877654
Q ss_pred ------eeeeeecCCCceecee
Q 021291 290 ------GIGFVCDQEGNKFGTT 305 (314)
Q Consensus 290 ------~~~~~~~~~~~~~~~~ 305 (314)
+..++++|+|..++..
T Consensus 356 ~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 356 IQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp EECSSCEEEEEECTTSSEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEE
Confidence 4557788999888764
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=5.8e-28 Score=205.45 Aligned_cols=250 Identities=10% Similarity=0.112 Sum_probs=176.5
Q ss_pred CceEEecCCC------------CceeEEEEccCC--CEEEEecCCCeEEEEeCCCCeEE---------------------
Q 021291 9 DPVAVLRGHR------------ASVTDVCFHQTK--PILFAGTTGGELRIWDTVQHRTV--------------------- 53 (314)
Q Consensus 9 ~~~~~l~~h~------------~~v~~~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~--------------------- 53 (314)
+++..+.+|. +.|++++|+|++ .+|++++.||.|++||+.+++..
T Consensus 72 ~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 151 (447)
T 3dw8_B 72 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTT 151 (447)
T ss_dssp EEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCS
T ss_pred eEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccc
Confidence 3588999998 889999999988 79999999999999998764432
Q ss_pred ------------------EE-EeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCC-CCC-----CCeeeeec
Q 021291 54 ------------------SS-SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG-LSS-----NPSLTIKT 108 (314)
Q Consensus 54 ------------------~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~-----~~~~~~~~ 108 (314)
.. ..+|. ..|.+++|+| ++++|++| .|++|++||+++.. ... ...+..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 226 (447)
T 3dw8_B 152 LRVPVFRPMDLMVEASPRRIFANAHT--YHINSISINS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT 226 (447)
T ss_dssp CCCCEEEEEEEEEEEEEEEEECSCCS--SCCCEEEECT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC
T ss_pred eEeccccchheeeeccceEEeccCCC--cceEEEEEcC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccC
Confidence 12 24566 4599999999 99999998 79999999998432 111 00011223
Q ss_pred ceeeEEEeeeeeccccccccCCCCcceeeccCCcee---eecCCCCC-------------C---ceeccCCCceEEEeec
Q 021291 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV---DTDSLCDS-------------K---DDVPAEGPKYMAVAGE 169 (314)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------------~---~~~~~~~~~~~~~~g~ 169 (314)
.......+++............+...+|+++..... ...+..|. . ++|+|+++.++ +++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~--~~~ 304 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM--TRD 304 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEE--EEE
T ss_pred cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEE--Eee
Confidence 334445555444334445556677888988776531 22333332 3 89999987554 566
Q ss_pred CcCeEEEEecCC-CceeeeecccccCCCCCcCCCCCc-----------eeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 170 QLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRG-----------MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 170 ~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~h~~~~~~-----------~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
. +.|++||+++ ++.+..+. +|...... .+..+. |+|+ +. +|++|+.||.|++||
T Consensus 305 ~-~~v~iwd~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~i~~~~~~~-~s~~---~~-~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 305 Y-LSVKVWDLNMENRPVETYQ--------VHEYLRSKLCSLYENDCIFDKFECC-WNGS---DS-VVMTGSYNNFFRMFD 370 (447)
T ss_dssp S-SEEEEEETTCCSSCSCCEE--------SCGGGTTTHHHHHHTSGGGCCCCEE-ECTT---SS-EEEEECSTTEEEEEE
T ss_pred C-CeEEEEeCCCCccccceee--------ccccccccccccccccccccceEEE-ECCC---CC-EEEEeccCCEEEEEE
Confidence 5 9999999997 77777777 55321110 123366 9998 55 899999999999999
Q ss_pred ccCCCCceEeeec---------------------------------CCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 238 IRNPGIPLTAMKV---------------------------------HLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 238 ~~~~~~~~~~~~~---------------------------------h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+.+ ++.+ .+.+ +...|..++|+|++.+|++++.++ +++|.-+
T Consensus 371 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 371 RNT-KRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TTT-CCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cCC-Ccce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 987 5443 3222 345788999999999999998876 7777643
No 113
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=2.5e-27 Score=190.86 Aligned_cols=229 Identities=12% Similarity=0.092 Sum_probs=159.7
Q ss_pred EEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeee-ccccccccCCCCc
Q 021291 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPK 133 (314)
Q Consensus 55 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 133 (314)
.+.+|.. .|.+++|+| ++++|++|+.|++|+|||+.+........+..+........++... ..........+..
T Consensus 4 ~~~~h~~--~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 4 IANAHNE--MIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp ECCSCSS--CEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eccCCcC--ceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 4567874 499999999 9999999999999999999754321111233333344444443321 2233444556778
Q ss_pred ceeeccCCc-eeeecCCCCCC----ceeccC--CCceEEEeecCcCeEEEEecCCCce--eeeecccccCCCCCcCCCCC
Q 021291 134 DCYEREVGE-TVDTDSLCDSK----DDVPAE--GPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGR 204 (314)
Q Consensus 134 ~~~~~~~~~-~~~~~~~~~~~----~~~~~~--~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~ 204 (314)
.+|++.... .....+.+|.. ++|+|+ +. +++ +++.|+.|++||++++.. ...+. +| .
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~-s~s~d~~v~~wd~~~~~~~~~~~~~--------~h----~ 145 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLL-VASSDGKVSVVEFKENGTTSPIIID--------AH----A 145 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEE-EEETTSEEEEEEBCSSSCBCCEEEE--------CC----S
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEE-EEECCCcEEEEEecCCCceeeeeee--------cc----c
Confidence 888887653 22333455655 889997 54 333 677799999999987642 23344 55 4
Q ss_pred ceeeeEEEecCCCC----------CCceEEEEeecCCcEEEEEccCCCC----ceEeeecCCcceEEEEEeCCC---CeE
Q 021291 205 GMCMAVQAYLPSKS----------QGFVNVLAGYEDGSILVWDIRNPGI----PLTAMKVHLEPVLCLSIDESC---NGG 267 (314)
Q Consensus 205 ~~~~~~~~~~p~~~----------~g~~~l~~g~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~~~~~~---~~l 267 (314)
..+.++. |+|+.. +++ +|++|+.|+.|++||++. +. +...+.+|...|.+++|+|++ .+|
T Consensus 146 ~~v~~~~-~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~-~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 146 IGVNSAS-WAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM 222 (297)
T ss_dssp SCEEEEE-ECCCC------------CC-EEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred CccceEe-ecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcC-CCceEEEEEEecCCCCceEEEEECCCCCCceEE
Confidence 4678887 999631 134 899999999999999987 44 556788999999999999984 789
Q ss_pred EEecCCCcEEEEecCCCe-----eeE-------eeeeeeecCCCceece
Q 021291 268 ISGGADQKIVLYNLDHST-----YVL-------FGIGFVCDQEGNKFGT 304 (314)
Q Consensus 268 ~s~s~dg~i~iw~~~~~~-----~~~-------~~~~~~~~~~~~~~~~ 304 (314)
++++.|+.|++||++.+. .+. .+...+++|+|..+++
T Consensus 223 as~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las 271 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred EEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEE
Confidence 999999999999998743 111 1334567788776654
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.6e-28 Score=198.62 Aligned_cols=212 Identities=11% Similarity=0.126 Sum_probs=151.7
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCC---------CCeEEEEEe-ccCCcccEEEEEEcccCCCCe
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV---------QHRTVSSSW-VHSAAHGIVSVATGPSIGLNK 78 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~---------~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 78 (314)
+.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .|. ..|.+++|+|..++++
T Consensus 69 ~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 141 (343)
T 3lrv_A 69 KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA--NEIIYMYGHNEVNTEY 141 (343)
T ss_dssp SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS--SCEEEEECCC---CCE
T ss_pred cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCC--CCEEEEEcCCCCCCCE
Confidence 4444444 467888888887 9999999999999765 444454444 444 4599999998545689
Q ss_pred EEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceecc
Q 021291 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (314)
Q Consensus 79 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (314)
|++++.||+|++||+++++... ...........+ ++|+|
T Consensus 142 l~s~s~dg~i~~wd~~~~~~~~--~~~~~~~~~i~~---------------------------------------~~~~p 180 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQYI--VHSAKSDVEYSS---------------------------------------GVLHK 180 (343)
T ss_dssp EEEEETTCCEEEEESSSSCEEE--EECCCSSCCCCE---------------------------------------EEECT
T ss_pred EEEEeCCCcEEEEECCCCcEEE--EEecCCCCceEE---------------------------------------EEECC
Confidence 9999999999999999876421 110010000000 67999
Q ss_pred CCCceEEEeecCcCeEEEEecCCCcee-eeecccccCCCCC-cCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPN-FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
++..+ ++|+.|+.|++||+++++.+ ..+. + | ...+.++. |+|+ |. +|++++ |+.|++|
T Consensus 181 dg~~l--asg~~dg~i~iwd~~~~~~~~~~~~--------~~h----~~~v~~l~-fs~~---g~-~l~s~~-~~~v~iw 240 (343)
T 3lrv_A 181 DSLLL--ALYSPDGILDVYNLSSPDQASSRFP--------VDE----EAKIKEVK-FADN---GY-WMVVEC-DQTVVCF 240 (343)
T ss_dssp TSCEE--EEECTTSCEEEEESSCTTSCCEECC--------CCT----TSCEEEEE-ECTT---SS-EEEEEE-SSBEEEE
T ss_pred CCCEE--EEEcCCCEEEEEECCCCCCCccEEe--------ccC----CCCEEEEE-EeCC---CC-EEEEEe-CCeEEEE
Confidence 98643 36778999999999999877 6666 4 6 45788998 9998 55 889988 5599999
Q ss_pred EccCCCCceEeeec---CCcceE--EEEEeCCCCeEEEecC-CCcEEEEecCCCeeeEe
Q 021291 237 DIRNPGIPLTAMKV---HLEPVL--CLSIDESCNGGISGGA-DQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 237 d~~~~~~~~~~~~~---h~~~v~--~~~~~~~~~~l~s~s~-dg~i~iw~~~~~~~~~~ 289 (314)
|+++ .+.+..+.. |...+. +++|+|++++|++++. |+.|++|+++.....+.
T Consensus 241 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 241 DLRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp ETTS-STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred EcCC-CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 9998 555544443 444444 6999999999999988 99999999977655443
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=188.56 Aligned_cols=215 Identities=15% Similarity=0.237 Sum_probs=154.6
Q ss_pred CCCceEEec--CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCC-----------------------
Q 021291 7 PPDPVAVLR--GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA----------------------- 61 (314)
Q Consensus 7 ~~~~~~~l~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----------------------- 61 (314)
.+++++.++ +|...|++++|+|++++|++|+.||+|++||+++++++..+.+|..
T Consensus 54 tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 54 SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHH 133 (318)
T ss_dssp TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEe
Confidence 346666554 6888999999999999999999999999999999887665543321
Q ss_pred ----------------cccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecce--eeEEEeeeeeccc
Q 021291 62 ----------------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS--YHFCKLSLVKEPY 123 (314)
Q Consensus 62 ----------------~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 123 (314)
...+..+.+.+ ++++|++++.|++|++||+++++............. .....+.+.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred eecCCCceeEEEEcCccCceEEEEEcC--CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 13377777888 889999999999999999998765433222222222 2222222222111
Q ss_pred cc--cccCCCCcceeeccCCceeeecCCCCCC--ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCc
Q 021291 124 AN--AKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF 199 (314)
Q Consensus 124 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h 199 (314)
.. .........+|+................ +.|+++++.+++++|+.|+.|++||+++++++..+. +|
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~--------gH 283 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK--------GH 283 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC--------CC
T ss_pred EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc--------CC
Confidence 11 1122234556666665544433322222 889999998888778889999999999999999998 78
Q ss_pred CCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 200 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
...+.+++ |+|+ |+ +|++|+.||+|+|||+..
T Consensus 284 ----~~~V~~l~-~spd---g~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 284 ----TSRVLSLT-MSPD---GA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp ----SSCEEEEE-ECTT---SS-CEEEEETTTEEEEECCSC
T ss_pred ----CCCEEEEE-EcCC---CC-EEEEEecCCeEEEEECCC
Confidence 45788898 9998 55 899999999999999976
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=9.5e-27 Score=197.23 Aligned_cols=269 Identities=8% Similarity=0.016 Sum_probs=194.6
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEE-----eccCCcccEEEEEEcccCCCCeEEEee
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-----WVHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
+.+..+..+ ..+.+++|+|++.++++++.|+.|++||+.+++....+ .+|. ..|.+++|+| ++.++++++
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPE--HNELWVSQM 188 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGG--GTEEEEEEG
T ss_pred eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcC--CCEEEEEEC
Confidence 345555544 44669999998888899999999999999999887633 3455 4599999999 889999999
Q ss_pred cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---ceeccCC
Q 021291 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEG 160 (314)
Q Consensus 84 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 160 (314)
.|+.|++||+++++... .+..+........+++............+...+|++........ +..+.. ++|+|++
T Consensus 189 ~d~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKA--TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK-TDKIGLPRGLLLSKDG 265 (433)
T ss_dssp GGTEEEEEETTTCCEEE--EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE-CCCCSEEEEEEECTTS
T ss_pred CCCEEEEEECCCceEEE--EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE-ecCCCCceEEEEcCCC
Confidence 99999999999876533 22222333344444443333323333455677788776654332 333333 8999999
Q ss_pred CceEEEeec------CcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEE
Q 021291 161 PKYMAVAGE------QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (314)
Q Consensus 161 ~~~~~~~g~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~ 234 (314)
+.+++++.. .|+.|++||+++++....+. | ...+..+. |+|+ ++.++++++.|+.|+
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~---------~----~~~~~~~~-~~~~---g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG---------P----PGNKRHIV-SGNT---ENKIYVSDMCCSKIE 328 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE---------E----EECEEEEE-ECSS---TTEEEEEETTTTEEE
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeecc---------C----CCCcceEE-ECCC---CCEEEEEecCCCEEE
Confidence 876653321 37899999999988776654 2 22566776 9998 544678889999999
Q ss_pred EEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecC---------------CCcEEEEecCCCeeeEe------eeee
Q 021291 235 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---------------DQKIVLYNLDHSTYVLF------GIGF 293 (314)
Q Consensus 235 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---------------dg~i~iw~~~~~~~~~~------~~~~ 293 (314)
+||+++ ++.+..+. +...+.+++|+|++++|++++. ||.|++||+.+++.+.. ...+
T Consensus 329 v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~ 406 (433)
T 3bws_A 329 VYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGL 406 (433)
T ss_dssp EEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred EEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceE
Confidence 999997 77777665 6788999999999998887776 57999999999887664 3456
Q ss_pred eecCCCceece
Q 021291 294 VCDQEGNKFGT 304 (314)
Q Consensus 294 ~~~~~~~~~~~ 304 (314)
+++|+|..+..
T Consensus 407 ~~s~dg~~l~~ 417 (433)
T 3bws_A 407 DVSPDNRYLVI 417 (433)
T ss_dssp EECTTSCEEEE
T ss_pred EEcCCCCEEEE
Confidence 67788876643
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.6e-26 Score=194.55 Aligned_cols=242 Identities=11% Similarity=0.017 Sum_probs=177.1
Q ss_pred EecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEE
Q 021291 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCW 91 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iw 91 (314)
.+.+|.+.|.+++|+++++++++++.|+.|++||+++++.+..+..|.. .+.+++|+| +++.++ +++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK--WSKILLYDP--IRDLVYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS--SEEEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC--CeeEEEEcC--CCCEEEEEecCCCcEEEE
Confidence 4568999999999999999999999999999999999999998887774 499999999 888775 55579999999
Q ss_pred eCCCCCCCCCCeeeeecc-eeeEEEeeeeecccccccc-------CCCCcceeeccCCceeeecC-CCCC-CceeccCCC
Q 021291 92 DIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQ-------ANEPKDCYEREVGETVDTDS-LCDS-KDDVPAEGP 161 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 161 (314)
|+++++... .+... ......+++.......... ..+...+|++...+...... .... .++|+|+++
T Consensus 240 d~~~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 240 DRKTKLEIR----KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTEN 315 (433)
T ss_dssp ETTTTEEEE----ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTT
T ss_pred ECCCCcEEE----EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCC
Confidence 999876432 22221 2222333333222222221 12345577776654433221 1111 189999998
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec------------
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE------------ 229 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~------------ 229 (314)
.+++ +++.|+.|++||+.+++....+.. ...+.+++ |+|+ |+ ++++++.
T Consensus 316 ~l~~-~~~~~~~v~v~d~~~~~~~~~~~~-------------~~~~~~~~-~s~d---g~-~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 316 KIYV-SDMCCSKIEVYDLKEKKVQKSIPV-------------FDKPNTIA-LSPD---GK-YLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp EEEE-EETTTTEEEEEETTTTEEEEEEEC-------------SSSEEEEE-ECTT---SS-EEEEEECCCCCTTTCTTSC
T ss_pred EEEE-EecCCCEEEEEECCCCcEEEEecC-------------CCCCCeEE-EcCC---CC-EEEEEecCCCccccccccc
Confidence 7765 566789999999999888777652 33567787 9998 55 6666655
Q ss_pred ---CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecC-CCcEEEEecCC
Q 021291 230 ---DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDH 283 (314)
Q Consensus 230 ---dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~i~iw~~~~ 283 (314)
||.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 377 g~~dg~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 377 GLVLGKVYVIDTTT-DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CSSCCEEEEEETTT-TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cccceEEEEEECCC-CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999988 777777776 567899999999999887764 99999999863
No 118
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=4e-27 Score=191.25 Aligned_cols=230 Identities=12% Similarity=0.081 Sum_probs=156.2
Q ss_pred EEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeee--cceeeEEEeeee-eccccccccCCC
Q 021291 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK--TNSYHFCKLSLV-KEPYANAKQANE 131 (314)
Q Consensus 55 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 131 (314)
.+.+|.. .|.+++|+| ++++|++|+.|++|++||++++.... ...+. ........++.. ...........+
T Consensus 8 ~~~~H~~--~V~~v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~--~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 8 VDTSHED--MIHDAQMDY--YGTRLATCSSDRSVKIFDVRNGGQIL--IADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ------C--CEEEEEECG--GGCEEEEEETTTEEEEEEEETTEEEE--EEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred ecccccC--eEEEeeEcC--CCCEEEEEeCCCeEEEEEecCCCcEE--EEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 3457874 499999999 99999999999999999998764211 22333 334444444332 123344455567
Q ss_pred CcceeeccCCc-eeeecCCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCcee---eeecccccCCCCCcCCCC
Q 021291 132 PKDCYEREVGE-TVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKG 203 (314)
Q Consensus 132 ~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~h~~~~ 203 (314)
...+|++.... .....+.+|.. ++|+|++...++++|+.|+.|++||++.+... ..+. +|
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~--------~h---- 149 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN--------AH---- 149 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT--------SS----
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec--------cc----
Confidence 78888887653 23344566665 89999842223347888999999999876422 2222 55
Q ss_pred CceeeeEEEecCCCC--------------CCceEEEEeecCCcEEEEEccCCC--CceEeeecCCcceEEEEEeCCC---
Q 021291 204 RGMCMAVQAYLPSKS--------------QGFVNVLAGYEDGSILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESC--- 264 (314)
Q Consensus 204 ~~~~~~~~~~~p~~~--------------~g~~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~--- 264 (314)
...+.++. |+|+.. .++ +|++|+.|+.|++||++..+ .++..+.+|...|.+++|+|++
T Consensus 150 ~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 227 (316)
T 3bg1_A 150 TIGCNAVS-WAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLP 227 (316)
T ss_dssp SSCBCCCE-ECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCS
T ss_pred cCCcceEE-EccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCC
Confidence 33566676 988731 123 79999999999999997522 3667888999999999999986
Q ss_pred -CeEEEecCCCcEEEEecCCC-------eeeE----eeeeeeecCCCceece
Q 021291 265 -NGGISGGADQKIVLYNLDHS-------TYVL----FGIGFVCDQEGNKFGT 304 (314)
Q Consensus 265 -~~l~s~s~dg~i~iw~~~~~-------~~~~----~~~~~~~~~~~~~~~~ 304 (314)
.+|++++.||+|++|+++.. +.+. .+..++++|++..+++
T Consensus 228 ~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las 279 (316)
T 3bg1_A 228 TSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAV 279 (316)
T ss_dssp CCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEE
T ss_pred CceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEE
Confidence 78999999999999998762 1111 1345667788876654
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=2.7e-25 Score=185.84 Aligned_cols=243 Identities=12% Similarity=0.089 Sum_probs=179.8
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEeCCCCCCCCCCeeeeecc
Q 021291 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (314)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 109 (314)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+| +++.+ ++++.|++|++||+.+++... .+....
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~--~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA--TVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE--EEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEE--EEECCC-
Confidence 468899999999999999999999888774 389999999 88876 677789999999999887543 222222
Q ss_pred eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCceee
Q 021291 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 186 (314)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~ 186 (314)
......+++................+|++...+..... ..+.. ++|+|+++.+++ +++.|+.|++||+++++.+.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~-~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-KTGKSPLGLALSPDGKKLYV-TNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECSSSEEEEEECTTSSEEEE-EETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE-eCCCCcceEEECCCCCEEEE-EeCCCCEEEEEECCCCcEEE
Confidence 33334444433333333334466778888776544332 22333 899999987655 56778999999999998887
Q ss_pred eecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCe
Q 021291 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 266 (314)
Q Consensus 187 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 266 (314)
.+. .+ ..+..+. |+|+ ++.++++++.++.|++||+++ ++.+..+. +...+.+++|+|++++
T Consensus 153 ~~~--------~~-----~~~~~~~-~~~d---g~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 153 TVS--------VG-----RSPKGIA-VTPD---GTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EEE--------CC-----SSEEEEE-ECTT---SSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSE
T ss_pred EEe--------cC-----CCcceEE-ECCC---CCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCE
Confidence 776 22 2346776 9998 553557888899999999997 66666665 5678899999999999
Q ss_pred EEEec---CCCcEEEEecCCCeeeEee------eeeeecCCCcee
Q 021291 267 GISGG---ADQKIVLYNLDHSTYVLFG------IGFVCDQEGNKF 302 (314)
Q Consensus 267 l~s~s---~dg~i~iw~~~~~~~~~~~------~~~~~~~~~~~~ 302 (314)
|++++ .++.|++||+++++.+..+ ..+.++|++..+
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKV 258 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEE
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEE
Confidence 98887 6899999999998876543 345677887654
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1e-25 Score=190.76 Aligned_cols=244 Identities=11% Similarity=0.130 Sum_probs=172.7
Q ss_pred CceeEEEEccCC----------CEEEEecC----CCeEEEEeCC--------------------------CCeE-EEEEe
Q 021291 19 ASVTDVCFHQTK----------PILFAGTT----GGELRIWDTV--------------------------QHRT-VSSSW 57 (314)
Q Consensus 19 ~~v~~~~~~~~~----------~~l~s~~~----dg~v~iwd~~--------------------------~~~~-~~~~~ 57 (314)
-+..++.|.|+. .+|+.|+. ...|.++++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 356888888854 46777765 3457777532 1111 23345
Q ss_pred ccCCcccEEEEEEcccCC-CCeEEEeecCCeEEEEeCCCCCC------CCCCeeeeecc--eeeEEEeeeeecccccccc
Q 021291 58 VHSAAHGIVSVATGPSIG-LNKVISQGRDGTVKCWDIENGGL------SSNPSLTIKTN--SYHFCKLSLVKEPYANAKQ 128 (314)
Q Consensus 58 ~~~~~~~v~~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 128 (314)
.|. ..|.+++|+| + +.+|++++.||.|++||+.+... ...+...+..+ ......+++..........
T Consensus 126 ~h~--~~v~~l~~~p--~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 126 NHE--GEVNRARYMP--QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EES--SCCSEEEEET--TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred cCC--CcEEEEEECC--CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 676 4499999999 6 67899999999999999976210 01223333333 3333444444333444555
Q ss_pred CCCCcceeeccCCce------eeecCCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCC---ceeeeecccccCC
Q 021291 129 ANEPKDCYEREVGET------VDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGG 195 (314)
Q Consensus 129 ~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~---~~~~~~~~~~~~~ 195 (314)
..+...+|++..... ....+.+|.. ++|+|++..+++ +++.|+.|++||++++ +.+..+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~-s~~~dg~i~i~d~~~~~~~~~~~~~~------ 274 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG-SVADDQKLMIWDTRNNNTSKPSHTVD------ 274 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEE-EEETTSEEEEEETTCSCSSSCSEEEE------
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEE-EEeCCCeEEEEECCCCCCCcceeEee------
Confidence 667788888876321 1233456655 899997766666 5666999999999987 4555554
Q ss_pred CCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCC-eEEEecCCC
Q 021291 196 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQ 274 (314)
Q Consensus 196 ~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg 274 (314)
+| ...+.++. |+|+ +..++++|+.||.|++||+++...++..+.+|...|++++|+|++. +|++++.||
T Consensus 275 --~~----~~~v~~i~-~~p~---~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 275 --AH----TAEVNCLS-FNPY---SEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp --CC----SSCEEEEE-ECSS---CTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred --cC----CCCeEEEE-eCCC---CCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 45 45688887 9998 4337999999999999999986788999999999999999999985 589999999
Q ss_pred cEEEEecCC
Q 021291 275 KIVLYNLDH 283 (314)
Q Consensus 275 ~i~iw~~~~ 283 (314)
.|++||+..
T Consensus 345 ~i~iwd~~~ 353 (430)
T 2xyi_A 345 RLHVWDLSK 353 (430)
T ss_dssp CCEEEEGGG
T ss_pred cEEEEeCCC
Confidence 999999987
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=7e-26 Score=185.86 Aligned_cols=217 Identities=13% Similarity=0.170 Sum_probs=151.1
Q ss_pred CceEEecCCCCceeEEEEcc--CCCEEEEecCCCeEEEEeCCCC---------eEEEEEeccCCcccEEEEEEcccCC--
Q 021291 9 DPVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQH---------RTVSSSWVHSAAHGIVSVATGPSIG-- 75 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~-- 75 (314)
+++..+.+|...|++++|+| ++++|++|+.||.|++||++++ +.+..+..|.. .|.+++|+| +
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~ 123 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG--SLYSVKFAP--AHL 123 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSS--CEEEEEECC--GGG
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCC--ceeEEEEcC--CCC
Confidence 46788899999999999999 6999999999999999999876 66778888884 499999999 7
Q ss_pred CCeEEEeecCCeEEEEeCCCCCCCCCCeeee-----------ecceeeEEEeeeee--ccccccccCCCCcceeeccCCc
Q 021291 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTI-----------KTNSYHFCKLSLVK--EPYANAKQANEPKDCYEREVGE 142 (314)
Q Consensus 76 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 142 (314)
+.+|++++.||.|++||+++++......... +........+.+.. ..........+....+......
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 8999999999999999999887654211100 11111222222220 1111112222222222323332
Q ss_pred -eeeecCCCCCC----ceeccCCC---ceEEEeecCcCeEEEEecCCC--------------------------------
Q 021291 143 -TVDTDSLCDSK----DDVPAEGP---KYMAVAGEQLSEVEIWDLNTA-------------------------------- 182 (314)
Q Consensus 143 -~~~~~~~~~~~----~~~~~~~~---~~~~~~g~~d~~i~vwd~~~~-------------------------------- 182 (314)
.....+.+|.. ++|+|++. .+++ +|+.|+.|++||++++
T Consensus 204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
T 3f3f_A 204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIA-TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDS 282 (351)
T ss_dssp EEEEEECCCCCSCEEEEEECCCSSCSSEEEE-EEETTSCEEEEEEEECC-------------------------------
T ss_pred eeeeeecCCCCcceeEEEECCCCCCcceEEE-EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccc
Confidence 23555667766 89999984 3444 6777999999999865
Q ss_pred --------------ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEee
Q 021291 183 --------------ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (314)
Q Consensus 183 --------------~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (314)
+.+..+. +| ...+.++. |+|+ ++ +|++|+.||.|++||+.+ ++.+..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~s~~---~~-~l~s~~~dg~v~iw~~~~-~~~~~~~ 344 (351)
T 3f3f_A 283 NTEEKAELQSNLQVELLSEHD--------DH----NGEVWSVS-WNLT---GT-ILSSAGDDGKVRLWKATY-SNEFKCM 344 (351)
T ss_dssp --------CCSEEEEEEEEEC--------TT----SSCEEEEE-ECSS---SC-CEEEEETTSCEEEEEECT-TSCEEEE
T ss_pred ccceeeeecccccccEEEEEe--------cc----cccEEEEE-EcCC---CC-EEEEecCCCcEEEEecCc-Ccchhhe
Confidence 2333333 44 45788888 9998 44 899999999999999997 5444433
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.8e-25 Score=183.31 Aligned_cols=234 Identities=9% Similarity=0.035 Sum_probs=167.9
Q ss_pred CceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC-
Q 021291 19 ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG- 96 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~- 96 (314)
..+..+++.++++.+ ++++.|++|+|||..+++++..+. +. ..|.+++|++ + .++.+ .|+.|++||+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~--~~v~~v~~~~--~--~~~~~-~~~~i~i~d~~~~~ 130 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VD--APVKDLFLSR--E--FIVVS-YGDVISVFKFGNPW 130 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CS--SCEEEEEECS--S--EEEEE-ETTEEEEEESSTTC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CC--CceEEEEEcC--C--EEEEE-EcCEEEEEECCCCc
Confidence 357888999888777 568889999999999999998887 44 4599999988 4 44444 4789999999987
Q ss_pred CCCCCCeeeeecceeeEEEeeeeecccccc-ccCCCCcceeeccCCce--------------e-eecCCCCCC----cee
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANA-KQANEPKDCYEREVGET--------------V-DTDSLCDSK----DDV 156 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~----~~~ 156 (314)
+.+. .+.. +...+.+++ ...... ....+...+|++..... . ...+.+|.. ++|
T Consensus 131 ~~~~----~~~~-~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~ 203 (355)
T 3vu4_A 131 KRIT----DDIR-FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL 203 (355)
T ss_dssp CBSS----CCEE-EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEE
T ss_pred eeeE----Eecc-CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE
Confidence 5544 2222 333344433 222222 34556778888876431 1 345667776 899
Q ss_pred ccCCCceEEEeecCcCe-EEEEecCCCceeeeecccccCCCCC-cCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEE
Q 021291 157 PAEGPKYMAVAGEQLSE-VEIWDLNTAERCTRLHQNSCGGSPN-FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (314)
Q Consensus 157 ~~~~~~~~~~~g~~d~~-i~vwd~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~ 234 (314)
+|+++.++ +|+.|++ |++||+++++.+..+.. + | ...+.+++ |+|+ |+ +|++++.|+.|+
T Consensus 204 s~~g~~l~--s~s~d~~~v~iwd~~~~~~~~~~~~-------g~h----~~~v~~~~-~s~~---~~-~l~s~s~d~~v~ 265 (355)
T 3vu4_A 204 NRKSDMVA--TCSQDGTIIRVFKTEDGVLVREFRR-------GLD----RADVVDMK-WSTD---GS-KLAVVSDKWTLH 265 (355)
T ss_dssp CTTSSEEE--EEETTCSEEEEEETTTCCEEEEEEC-------TTC----CSCEEEEE-ECTT---SC-EEEEEETTCEEE
T ss_pred CCCCCEEE--EEeCCCCEEEEEECCCCcEEEEEEc-------CCC----CCcEEEEE-ECCC---CC-EEEEEECCCEEE
Confidence 99987443 6778998 99999999999988872 2 5 45788888 9998 55 899999999999
Q ss_pred EEEccCCCC-ceEeee---------------------cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 235 VWDIRNPGI-PLTAMK---------------------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 235 vwd~~~~~~-~~~~~~---------------------~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
+||++.... ....+. .+......++|++++.+|++++.||.+++|++..++
T Consensus 266 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 266 VFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 999976221 111111 112234678999999999999999999999986543
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=3.9e-26 Score=181.72 Aligned_cols=170 Identities=14% Similarity=0.058 Sum_probs=123.2
Q ss_pred CCceEEecCCCCceeEEEEcc---CCCEEEEecCCCeEEEEeCCCCeEEEEEeccC-CcccEEEEEEcccCCCCeE----
Q 021291 8 PDPVAVLRGHRASVTDVCFHQ---TKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKV---- 79 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l---- 79 (314)
++.+..+.+|...++.++|++ ++.+|++|+.|++|+|||+++++++.++.+|. ....+.+++|+| ++.++
T Consensus 168 G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lvs~s 245 (356)
T 2w18_A 168 GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE--MGLLFIVLS 245 (356)
T ss_dssp SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE--TTEEEEEEC
T ss_pred CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC--CCCEEEEec
Confidence 577788888999999999999 67899999999999999999999999998653 223588889999 88876
Q ss_pred --------EEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCC
Q 021291 80 --------ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (314)
Q Consensus 80 --------~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (314)
++|+.|++|++||..+++.+. .+.... + .+|
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~--v~~~~~---------p------------------------------~Gh 284 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSVG--VMLYCL---------P------------------------------PGQ 284 (356)
T ss_dssp ------------CCEEEEEEETTTTEEEE--EEEECC---------C------------------------------TTC
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEEE--EEEeec---------c------------------------------CCC
Confidence 568889999999999886432 110000 0 000
Q ss_pred CC--ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 152 SK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 152 ~~--~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
.. ++.+.++. ++++|+.|++|+|||+++++++.++. +|... .+..++ |+|+ |+ +|++|+.
T Consensus 285 ~~~~lsg~~sg~--~lASgS~DgTIkIWDl~tGk~l~tL~--------gH~~~---vvs~va-fSPD---G~-~LaSGS~ 346 (356)
T 2w18_A 285 AGRFLEGDVKDH--CAAAILTSGTIAIWDLLLGQCTALLP--------PVSDQ---HWSFVK-WSGT---DS-HLLAGQK 346 (356)
T ss_dssp CCCEEEEEEETT--EEEEEETTSCEEEEETTTCSEEEEEC--------CC--C---CCCEEE-ECSS---SS-EEEEECT
T ss_pred cceeEccccCCC--EEEEEcCCCcEEEEECCCCcEEEEec--------CCCCC---eEEEEE-ECCC---CC-EEEEEEC
Confidence 00 11112222 34478889999999999999999998 67432 233465 9998 55 9999999
Q ss_pred CCcEEEEEc
Q 021291 230 DGSILVWDI 238 (314)
Q Consensus 230 dg~i~vwd~ 238 (314)
|++|+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999996
No 124
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.8e-25 Score=183.21 Aligned_cols=216 Identities=16% Similarity=0.162 Sum_probs=156.9
Q ss_pred CCceEEecCCCCceeEEEEccC--CCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCC--CCeEEE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIG--LNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s 81 (314)
.+++..+.+|.+.|++++|+++ +++|++|+.||.|++||+.+++ .+..+..|. ..|.+++|+| + +.+|++
T Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~~l~~ 120 (379)
T 3jrp_A 45 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS--ASVNSVQWAP--HEYGPLLLV 120 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECC--GGGCSEEEE
T ss_pred ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCC--cceEEEEeCC--CCCCCEEEE
Confidence 3567889999999999999976 9999999999999999999987 667777777 4499999999 7 899999
Q ss_pred eecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeee------------eccccccccCCCCcceeeccCCc---eeee
Q 021291 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV------------KEPYANAKQANEPKDCYEREVGE---TVDT 146 (314)
Q Consensus 82 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 146 (314)
++.|+.|++||+++........+..+........+.+. ...........+...+|+++... ....
T Consensus 121 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 121 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE
Confidence 99999999999998755431122223333444444442 12333444556678888887554 3444
Q ss_pred cCCCCCC----ceeccCC--CceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCC
Q 021291 147 DSLCDSK----DDVPAEG--PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (314)
Q Consensus 147 ~~~~~~~----~~~~~~~--~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g 220 (314)
.+.+|.. ++|+|++ ..+++ +++.|+.|++||++++........ .........+.++. |+|+ +
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~~~-~s~~---g 268 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTL-------LKEEKFPDVLWRAS-WSLS---G 268 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEE-------SSSSCCSSCEEEEE-ECSS---S
T ss_pred EEecccCcEeEEEECCCCCCCCeEE-EEeCCCEEEEEeCCCCCccceeee-------eccccCCCcEEEEE-EcCC---C
Confidence 5666766 8999994 34444 566799999999998652211110 11112355788887 9998 5
Q ss_pred ceEEEEeecCCcEEEEEccC
Q 021291 221 FVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~ 240 (314)
+ +|++++.||.|++||++.
T Consensus 269 ~-~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 269 N-VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp C-CEEEEESSSSEEEEEEEE
T ss_pred C-EEEEecCCCcEEEEeCCC
Confidence 5 899999999999999985
No 125
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=7.9e-25 Score=183.66 Aligned_cols=253 Identities=13% Similarity=0.095 Sum_probs=150.5
Q ss_pred cCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccC-CCCeEEEeecCCeEEEEe
Q 021291 15 RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVISQGRDGTVKCWD 92 (314)
Q Consensus 15 ~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~~~dg~v~iwd 92 (314)
.+|...|.+++|+| ++++|++++.||.|++||+.+++....+. +. ..+.++.|+|.. ++.++++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FE--ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CS--SCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CC--CceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 78899999999999999999999888876 44 449999998831 234899999999999999
Q ss_pred CCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecC---------------CCCCC----
Q 021291 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS---------------LCDSK---- 153 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~---- 153 (314)
+++++... .+..+........+++............+...+|+++........+ ..|..
T Consensus 173 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 173 LKSGSCSH--ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp SSSSCCCE--EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred CCCcceee--eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 99886643 3333344444555555444334455666778888887654222222 34444
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccC-----------------------------------CCCC
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCG-----------------------------------GSPN 198 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~-----------------------------------~~~~ 198 (314)
++|+|+++.++ +++.|+.|++||+++++....+...... ....
T Consensus 251 ~~~~~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 251 LCFTSDGLHLL--TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp EEECTTSSEEE--EEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE
T ss_pred EEEcCCCCEEE--EecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee
Confidence 88999987554 5666899999999876643322100000 0000
Q ss_pred cCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeC-CCCeEEEecCCCcEE
Q 021291 199 FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIV 277 (314)
Q Consensus 199 h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~ 277 (314)
.-......+.++. |+|+ ++ +|++|+.||.|++||+++ .+++.....+... ..+.+ ....+.+.+.|+.++
T Consensus 329 ~~~~~~~~v~~~~-~s~~---~~-~l~s~~~dg~i~iw~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 399 (408)
T 4a11_B 329 MLKGHYKTVDCCV-FQSN---FQ-ELYSGSRDCNILAWVPSL-YEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGGTS 399 (408)
T ss_dssp EECCCSSCEEEEE-EETT---TT-EEEEEETTSCEEEEEECC--------------------------------------
T ss_pred eeccCCCeEEEEE-EcCC---CC-EEEEECCCCeEEEEeCCC-CCccCCCCceEec---cccccccceeecccCccCcee
Confidence 0011245788887 9998 55 899999999999999998 6665554433221 22322 233456777899999
Q ss_pred EEecCC
Q 021291 278 LYNLDH 283 (314)
Q Consensus 278 iw~~~~ 283 (314)
+|+...
T Consensus 400 ~W~~~~ 405 (408)
T 4a11_B 400 AWSHPQ 405 (408)
T ss_dssp ------
T ss_pred ecCCcc
Confidence 998654
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=4.7e-23 Score=178.60 Aligned_cols=280 Identities=10% Similarity=0.005 Sum_probs=189.7
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeC--CCCeEEEEEeccCCcccEEEEEEccc--CCCCeEEEe
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGPS--IGLNKVISQ 82 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~ 82 (314)
.++++.++..+.. +.+++|+|||++|++++.|+.|++||+ .+++.+..+... ..+..++|+|. .++++++++
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g---~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG---IEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC---SEEEEEEECCSTTCTTTEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC---CCcceEEeCCCcCCCCCEEEEE
Confidence 4567788873333 889999999999999999999999999 889988888743 34799999871 146788887
Q ss_pred e-cCCeEEEEeCCCCCCCCCCeeeeec----------c-eeeEEEeeeeeccccccccCCCCcceeeccCCceee--e-c
Q 021291 83 G-RDGTVKCWDIENGGLSSNPSLTIKT----------N-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD--T-D 147 (314)
Q Consensus 83 ~-~dg~v~iwd~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~ 147 (314)
+ .+++|.+||..+++++. .+.... . ......+++............+...+++......+. . .
T Consensus 244 ~~~~~~v~v~D~~t~~~~~--~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp EEESSEEEEEETTTCCEEE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred EccCCeEEEEeccccccce--eecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 7 48999999999887644 222111 0 112222232222222233334455556655433221 1 1
Q ss_pred CCCCC-CceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 148 SLCDS-KDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 148 ~~~~~-~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
..... .++|+|+|+++++ ++..+++|.+||+.+++++..+... ...|. +....+ ++|+ +..++++
T Consensus 322 ~~~~~~~~~~spdg~~l~v-a~~~~~~v~v~D~~tg~l~~~i~~g----~~ph~----g~g~~~--~~p~---~g~~~~s 387 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMT-AANNSNKVAVIDSKDRRLSALVDVG----KTPHP----GRGANF--VHPK---YGPVWST 387 (543)
T ss_dssp CCSSCCCEEECTTSCEEEE-EEGGGTEEEEEETTTTEEEEEEECS----SSBCC----TTCEEE--EETT---TEEEEEE
T ss_pred cCcCccCceECCCCCEEEE-EecCCCeEEEEECCCCeEEEeeccC----CCCCC----CCCccc--CCCC---CccEEEe
Confidence 11111 2899999987765 4555789999999999988877620 00131 112221 4665 2326777
Q ss_pred ee-cCCcEEEEEccCC------CCceEeeecCCcceEEEEEeCCCCeEEEec-------CCCcEEEEecCCCeeeEe---
Q 021291 227 GY-EDGSILVWDIRNP------GIPLTAMKVHLEPVLCLSIDESCNGGISGG-------ADQKIVLYNLDHSTYVLF--- 289 (314)
Q Consensus 227 g~-~dg~i~vwd~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~dg~i~iw~~~~~~~~~~--- 289 (314)
+. .|++|.+||+.+. .++++++.+|...+..++++|++++|++++ .+++|.+||+++++..+.
T Consensus 388 ~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~ 467 (543)
T 1nir_A 388 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP 467 (543)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC
T ss_pred ccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEee
Confidence 65 6899999999862 578899999999999999999999999987 277999999998876632
Q ss_pred -------------eeeeeecCCCceec-eee
Q 021291 290 -------------GIGFVCDQEGNKFG-TTW 306 (314)
Q Consensus 290 -------------~~~~~~~~~~~~~~-~~w 306 (314)
...+.++++|..+. ++|
T Consensus 468 v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 468 IAEWADLGEGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp HHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred chhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence 23466778887544 445
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.1e-24 Score=192.79 Aligned_cols=216 Identities=16% Similarity=0.162 Sum_probs=158.1
Q ss_pred CCceEEecCCCCceeEEEEccC--CCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCC--CCeEEE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIG--LNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s 81 (314)
.+.+..+.+|.++|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..|. ..|.+++|+| + ++.|++
T Consensus 43 ~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~--~~V~~v~~sp--~~~~~~l~s 118 (753)
T 3jro_A 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS--ASVNSVQWAP--HEYGPLLLV 118 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECC--GGGCSEEEE
T ss_pred CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC--CCeEEEEECC--CCCCCEEEE
Confidence 3567889999999999999987 9999999999999999999887 667777787 4599999999 7 899999
Q ss_pred eecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeee------------eccccccccCCCCcceeeccCCc---eeee
Q 021291 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV------------KEPYANAKQANEPKDCYEREVGE---TVDT 146 (314)
Q Consensus 82 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 146 (314)
|+.||+|++||++++..........+........+++. ...........+...+|+++... ....
T Consensus 119 gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 198 (753)
T 3jro_A 119 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198 (753)
T ss_dssp EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee
Confidence 99999999999998755432222233334444444442 12334445556778888887654 3445
Q ss_pred cCCCCCC----ceeccCC--CceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCC
Q 021291 147 DSLCDSK----DDVPAEG--PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (314)
Q Consensus 147 ~~~~~~~----~~~~~~~--~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g 220 (314)
.+.+|.. ++|+|++ ..+++ +++.||.|++||+++++....... .........+.++. |+|+ |
T Consensus 199 ~~~~h~~~V~~l~~sp~~~~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~l~-~spd---g 266 (753)
T 3jro_A 199 TLEGHSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTL-------LKEEKFPDVLWRAS-WSLS---G 266 (753)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEE-EEESSSCEEEEEESSSSSCCBCCB-------SSSSCCSSCCCCEE-ECTT---T
T ss_pred eecCCCCcEEEEEeccCCCCCCEEE-EEecCCEEEEecCCCCCCcceeEE-------eccCCCCCceEEEE-EcCC---C
Confidence 5667766 8999993 33444 566799999999998653211110 11112355677887 9998 5
Q ss_pred ceEEEEeecCCcEEEEEccC
Q 021291 221 FVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~ 240 (314)
. ++++|+.||.|++||++.
T Consensus 267 ~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 267 N-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp C-CEEEECSSSCEECCBCCS
T ss_pred C-EEEEEcCCCEEEEEecCC
Confidence 5 899999999999999985
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=9.6e-23 Score=171.49 Aligned_cols=208 Identities=11% Similarity=0.016 Sum_probs=152.8
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCC---eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-Eee
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQG 83 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~ 83 (314)
+..++.+.+|...|.+++|+|||++|++++.|+ .|++||+.+++.. .+..+. ..+.+++|+| +++.|+ +++
T Consensus 168 g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~--~~~~~~~~sp--dg~~la~~~~ 242 (415)
T 2hqs_A 168 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFP--RHNGAPAFSP--DGSKLAFALS 242 (415)
T ss_dssp SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCS--SCEEEEEECT--TSSEEEEEEC
T ss_pred CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCC--CcccCEEEcC--CCCEEEEEEe
Confidence 455678888999999999999999999999885 9999999988775 455666 4499999999 999887 666
Q ss_pred cCCe--EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCC
Q 021291 84 RDGT--VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (314)
Q Consensus 84 ~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
.|+. |++||+.+++.. .+........ . ++|+|+|+
T Consensus 243 ~~g~~~i~~~d~~~~~~~-----~l~~~~~~~~--~------------------------------------~~~spdg~ 279 (415)
T 2hqs_A 243 KTGSLNLYVMDLASGQIR-----QVTDGRSNNT--E------------------------------------PTWFPDSQ 279 (415)
T ss_dssp TTSSCEEEEEETTTCCEE-----ECCCCSSCEE--E------------------------------------EEECTTSS
T ss_pred cCCCceEEEEECCCCCEE-----eCcCCCCccc--c------------------------------------eEECCCCC
Confidence 6654 999999887531 1111111000 0 56999998
Q ss_pred ceEEEeecCcC--eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC---CcEEEE
Q 021291 162 KYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---GSILVW 236 (314)
Q Consensus 162 ~~~~~~g~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d---g~i~vw 236 (314)
.+++. +..++ .|.+||+.+++.. .+. .+ ...+.++. |+|+ |+ +|++++.+ ..|++|
T Consensus 280 ~l~~~-s~~~g~~~i~~~d~~~~~~~-~l~--------~~----~~~~~~~~-~spd---G~-~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 280 NLAFT-SDQAGRPQVYKVNINGGAPQ-RIT--------WE----GSQNQDAD-VSSD---GK-FMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp EEEEE-ECTTSSCEEEEEETTSSCCE-ECC--------CS----SSEEEEEE-ECTT---SS-EEEEEEECSSCEEEEEE
T ss_pred EEEEE-ECCCCCcEEEEEECCCCCEE-EEe--------cC----CCcccCeE-ECCC---CC-EEEEEECcCCceEEEEE
Confidence 76653 33344 6888899877643 333 22 23566777 9998 55 66666553 589999
Q ss_pred EccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCC---cEEEEecCCCe
Q 021291 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ---KIVLYNLDHST 285 (314)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg---~i~iw~~~~~~ 285 (314)
|+.+ ++. ..+..|. .+.+++|+|+|++|++++.|+ .|++||++.+.
T Consensus 341 d~~~-~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 341 DLAT-GGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp ETTT-CCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred ECCC-CCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 9997 554 4566554 899999999999999988877 79999998543
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=9.8e-22 Score=160.48 Aligned_cols=255 Identities=6% Similarity=0.009 Sum_probs=168.8
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEecC-CCeEEEEeCCCCeE-EEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
.++.+..+..+...+ +++|+|+|++|++++. ++.|.+||..+++. ...+..+..+ ..+++|+| ++++++++..
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~--dg~~l~~~~~ 103 (331)
T 3u4y_A 29 TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS--MADVDITP--DDQFAVTVTG 103 (331)
T ss_dssp TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC--CCCEEECT--TSSEEEECCC
T ss_pred ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC--ccceEECC--CCCEEEEecC
Confidence 456667777777777 9999999996665554 89999999999887 6666666533 55599999 9999996555
Q ss_pred CC---eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCC-cceeeccCCcee----eecCCCCCC---
Q 021291 85 DG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEP-KDCYEREVGETV----DTDSLCDSK--- 153 (314)
Q Consensus 85 dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~--- 153 (314)
++ .|.+||+.+++... .+... .......+++.+............ ..+|++...... .........
T Consensus 104 ~~~~~~i~v~d~~~~~~~~--~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 104 LNHPFNMQSYSFLKNKFIS--TIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp SSSSCEEEEEETTTTEEEE--EEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred CCCcccEEEEECCCCCeEE--EEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence 53 89999999886543 22221 222344455544333333333344 667776543221 111122222
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCce---eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
++|+|+|+.+++ ++..++.|.+||+.+++. +..+.. ...+..+. |+|+ |+.++++...+
T Consensus 181 ~~~spdg~~l~v-~~~~~~~v~v~d~~~~~~~~~~~~~~~-------------~~~~~~~~-~spd---g~~l~v~~~~~ 242 (331)
T 3u4y_A 181 ITFTPDGNFAFV-ANLIGNSIGILETQNPENITLLNAVGT-------------NNLPGTIV-VSRD---GSTVYVLTEST 242 (331)
T ss_dssp EEECTTSSEEEE-EETTTTEEEEEECSSTTSCEEEEEEEC-------------SSCCCCEE-ECTT---SSEEEEECSSE
T ss_pred eEECCCCCEEEE-EeCCCCeEEEEECCCCcccceeeeccC-------------CCCCceEE-ECCC---CCEEEEEEcCC
Confidence 899999987665 555689999999998887 666652 23445666 9998 66344555567
Q ss_pred CcEEEEEccCCCCc--eEeeecC----Cc---ceEEEEEeCCCCeEEE-ecCCCcEEEEecCCCeeeE
Q 021291 231 GSILVWDIRNPGIP--LTAMKVH----LE---PVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 231 g~i~vwd~~~~~~~--~~~~~~h----~~---~v~~~~~~~~~~~l~s-~s~dg~i~iw~~~~~~~~~ 288 (314)
+.|.+||+.+ ++. +..+..+ .. ....++|+|++++|++ +..++.|.+||+......+
T Consensus 243 ~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 243 VDVFNFNQLS-GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGY 309 (331)
T ss_dssp EEEEEEETTT-TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CEEEEEECCC-CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccc
Confidence 8899999987 554 3333322 22 2356899999998754 5556799999998766433
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1e-21 Score=157.40 Aligned_cols=229 Identities=12% Similarity=0.105 Sum_probs=160.2
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC-CeEEEEEeccCCcccEEEEEEcccCCCCeEEEee--cCC
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG--RDG 86 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~--~dg 86 (314)
....+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+.. ..|.+++|+| ++++|++++ .++
T Consensus 33 ~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~sp--dg~~l~~~~~~~~~ 108 (297)
T 2ojh_A 33 KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFAT-ICNNDHGISP--DGALYAISDKVEFG 108 (297)
T ss_dssp EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCC-CBCSCCEECT--TSSEEEEEECTTTS
T ss_pred ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccc-ccccceEECC--CCCEEEEEEeCCCC
Confidence 3455667899999999999999999886 78999999998 777666555531 4588999999 999999988 334
Q ss_pred eEEEEeC--CCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 87 TVKCWDI--ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 87 ~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
...||.+ .++.. ..+........ ++|+|+++.++
T Consensus 109 ~~~l~~~~~~~~~~-----~~~~~~~~~~~---------------------------------------~~~spdg~~l~ 144 (297)
T 2ojh_A 109 KSAIYLLPSTGGTP-----RLMTKNLPSYW---------------------------------------HGWSPDGKSFT 144 (297)
T ss_dssp SCEEEEEETTCCCC-----EECCSSSSEEE---------------------------------------EEECTTSSEEE
T ss_pred cceEEEEECCCCce-----EEeecCCCccc---------------------------------------eEECCCCCEEE
Confidence 5555554 44431 11111111111 45999998766
Q ss_pred EEeecCcCeEEEEecC--CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEE-EeecCCcEEEEEccCC
Q 021291 165 AVAGEQLSEVEIWDLN--TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL-AGYEDGSILVWDIRNP 241 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~-~g~~dg~i~vwd~~~~ 241 (314)
+ ++..|+.+++|++. +++ ...+. .+ ...+.++. |+|+ |+ .|+ ++..++.+++|+++..
T Consensus 145 ~-~~~~~~~~~l~~~~~~~~~-~~~~~--------~~----~~~~~~~~-~s~d---g~-~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 145 Y-CGIRDQVFDIYSMDIDSGV-ETRLT--------HG----EGRNDGPD-YSPD---GR-WIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp E-EEEETTEEEEEEEETTTCC-EEECC--------CS----SSCEEEEE-ECTT---SS-EEEEEECTTSSCEEEEEETT
T ss_pred E-EECCCCceEEEEEECCCCc-ceEcc--------cC----CCccccce-ECCC---CC-EEEEEecCCCCccEEEECCC
Confidence 5 45557889999864 333 33333 22 34567777 9998 55 455 4556899999998743
Q ss_pred CCceEeeecCCcceEEEEEeCCCCeEEEecCC-----------CcEEEEecCCCeee--Ee-------eeeeeecCCCce
Q 021291 242 GIPLTAMKVHLEPVLCLSIDESCNGGISGGAD-----------QKIVLYNLDHSTYV--LF-------GIGFVCDQEGNK 301 (314)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----------g~i~iw~~~~~~~~--~~-------~~~~~~~~~~~~ 301 (314)
+..+..+..|...+..++|+|++++|++++.+ +.|++||+++++.. .. ...+.++|+|..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 206 GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCE
Confidence 66777888888899999999999999888876 56999999887643 22 122456677776
Q ss_pred ecee
Q 021291 302 FGTT 305 (314)
Q Consensus 302 ~~~~ 305 (314)
+...
T Consensus 286 l~~~ 289 (297)
T 2ojh_A 286 FAYV 289 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=1e-21 Score=165.18 Aligned_cols=228 Identities=12% Similarity=0.066 Sum_probs=161.4
Q ss_pred CCCce--EEecCCCCceeEEEEcc--------------CCCEEEEecCC------CeEEEEeCCCCeEEEEEeccCCccc
Q 021291 7 PPDPV--AVLRGHRASVTDVCFHQ--------------TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHG 64 (314)
Q Consensus 7 ~~~~~--~~l~~h~~~v~~~~~~~--------------~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~ 64 (314)
.++.+ ..+.+|...+..+++++ .+..++.++.+ +.|++||++. .....+..|.. .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~--~ 180 (415)
T 2hqs_A 104 PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQ--P 180 (415)
T ss_dssp TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESS--C
T ss_pred CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCC--c
Confidence 34555 55889999888888775 15566666554 7999999874 55667777774 4
Q ss_pred EEEEEEcccCCCCeEEEeecCC---eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCC
Q 021291 65 IVSVATGPSIGLNKVISQGRDG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (314)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (314)
|.+++|+| +++.|++++.++ .|++||+++++.. .+........ .
T Consensus 181 v~~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~~-----~l~~~~~~~~--~------------------------ 227 (415)
T 2hqs_A 181 LMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVR-----QVASFPRHNG--A------------------------ 227 (415)
T ss_dssp EEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCEE-----EEECCSSCEE--E------------------------
T ss_pred ceeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcEE-----EeecCCCccc--C------------------------
Confidence 99999999 999999999875 9999999987542 1111111100 0
Q ss_pred ceeeecCCCCCCceeccCCCceEEEeecCcC--eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCC
Q 021291 142 ETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (314)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~ 219 (314)
++|+|+|+.+++ +++.|+ .|++||+++++. ..+. .| ...+.++. |+|+
T Consensus 228 ------------~~~spdg~~la~-~~~~~g~~~i~~~d~~~~~~-~~l~--------~~----~~~~~~~~-~spd--- 277 (415)
T 2hqs_A 228 ------------PAFSPDGSKLAF-ALSKTGSLNLYVMDLASGQI-RQVT--------DG----RSNNTEPT-WFPD--- 277 (415)
T ss_dssp ------------EEECTTSSEEEE-EECTTSSCEEEEEETTTCCE-EECC--------CC----SSCEEEEE-ECTT---
T ss_pred ------------EEEcCCCCEEEE-EEecCCCceEEEEECCCCCE-EeCc--------CC----CCcccceE-ECCC---
Confidence 569999987664 444444 599999998775 3444 34 34567777 9998
Q ss_pred CceEEEEeec-CC--cEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCC---CcEEEEecCCCeeeEe----
Q 021291 220 GFVNVLAGYE-DG--SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTYVLF---- 289 (314)
Q Consensus 220 g~~~l~~g~~-dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---g~i~iw~~~~~~~~~~---- 289 (314)
|+ .|++++. ++ .|++||+.+ ++ ...+..|...+.+++|+|+|++|++++.+ ..|++||+++++....
T Consensus 278 g~-~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~ 354 (415)
T 2hqs_A 278 SQ-NLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 354 (415)
T ss_dssp SS-EEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS
T ss_pred CC-EEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC
Confidence 55 6666655 45 677778876 44 44566677889999999999999888764 5899999998765432
Q ss_pred -eeeeeecCCCceec
Q 021291 290 -GIGFVCDQEGNKFG 303 (314)
Q Consensus 290 -~~~~~~~~~~~~~~ 303 (314)
....+++|+|..+.
T Consensus 355 ~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 355 LDETPSLAPNGTMVI 369 (415)
T ss_dssp SCEEEEECTTSSEEE
T ss_pred CcCCeEEcCCCCEEE
Confidence 23456778887554
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=2.9e-20 Score=152.98 Aligned_cols=261 Identities=11% Similarity=0.079 Sum_probs=176.9
Q ss_pred CCCceeEEEEccCCCEEEEecC-------CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeE
Q 021291 17 HRASVTDVCFHQTKPILFAGTT-------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTV 88 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v 88 (314)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.... .+..++|+| +++.++ +...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL---KPFGATINN--TTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS---CCCSEEEET--TTTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC---CcceEEECC--CCCEEEEEecCCCEE
Confidence 4467889999999998887764 5689999999999888886543 367899999 888555 55568999
Q ss_pred EEEeCCCCCCCCCCeeeeecce---------eeEEEeeeeeccccccc-cCCCCcceeeccCCceeeecC-CCC--CCce
Q 021291 89 KCWDIENGGLSSNPSLTIKTNS---------YHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDS-LCD--SKDD 155 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 155 (314)
.+||..+++... .+...... .....+++......... ........++....+...... .+. ..++
T Consensus 114 ~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 114 TAIDAKTGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEETTTCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEeCCCCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 999999887543 22221111 22233333332222222 123445666666665443332 222 2299
Q ss_pred eccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEE
Q 021291 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (314)
|+|+++.+++ ++.++.|.+||+.+++....+.. ...........+. |+|+ |+.++++...++.|.+
T Consensus 192 ~s~dg~~l~~--~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~-~s~d---g~~l~~~~~~~~~v~~ 257 (353)
T 3vgz_A 192 LDSEGKRLYT--TNADGELITIDTADNKILSRKKL--------LDDGKEHFFINIS-LDTA---RQRAFITDSKAAEVLV 257 (353)
T ss_dssp EETTTTEEEE--ECTTSEEEEEETTTTEEEEEEEC--------CCSSSCCCEEEEE-EETT---TTEEEEEESSSSEEEE
T ss_pred ECCCCCEEEE--EcCCCeEEEEECCCCeEEEEEEc--------CCCCCCcccceEE-ECCC---CCEEEEEeCCCCEEEE
Confidence 9999987665 33479999999999988877662 1111233566676 9998 5534455555699999
Q ss_pred EEccCCCCceEeeecCCcceEEEEEeCCCCeE-EEecCCCcEEEEecCCCeeeEe------eeeeeecCCCce
Q 021291 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTYVLF------GIGFVCDQEGNK 301 (314)
Q Consensus 236 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~~ 301 (314)
||..+ ++.+..+.... + ..++|+|+++++ ++...++.|.+||+.+++.+.. ..+++++++|..
T Consensus 258 ~d~~~-~~~~~~~~~~~-~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 327 (353)
T 3vgz_A 258 VDTRN-GNILAKVAAPE-S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKT 327 (353)
T ss_dssp EETTT-CCEEEEEECSS-C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCE
T ss_pred EECCC-CcEEEEEEcCC-C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCE
Confidence 99988 77777776533 2 579999999865 5555789999999999887654 345667888873
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=5.5e-21 Score=165.67 Aligned_cols=251 Identities=11% Similarity=-0.001 Sum_probs=173.8
Q ss_pred EEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeC--CCCCCCCCC
Q 021291 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI--ENGGLSSNP 102 (314)
Q Consensus 25 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~ 102 (314)
+|+|++.++++++.|++|.+||..+++++.++..+. . +..++|+| ++++|++++.|++|.+||+ .+++++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--~-~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~~~-- 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--A-VHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKVA-- 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--T-EEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEEE--
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--c-cceEEECC--CCCEEEEECCCCeEEEEECcCCCCcEEE--
Confidence 488999999999999999999999999999987443 2 88999999 9999999999999999999 6665432
Q ss_pred eeeeecc-eeeEEEeee----eeccccccccCCCCcceeeccCCceeeecCC-C--------CC--C---ceeccCCCce
Q 021291 103 SLTIKTN-SYHFCKLSL----VKEPYANAKQANEPKDCYEREVGETVDTDSL-C--------DS--K---DDVPAEGPKY 163 (314)
Q Consensus 103 ~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~--~---~~~~~~~~~~ 163 (314)
++... ......+++ .+..............+|+....+.+..... + |. . +.++|++..+
T Consensus 217 --~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 217 --EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp --EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred --EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 33322 223334444 3333333333455667777766654432211 1 11 1 7889988876
Q ss_pred EEEeecCcCeEEEEecCCCceee--eecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCT--RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (314)
++ +...++.|.+||+.+.+.+. .+. + ......+. |+|+ |+++++++..+++|.+||+.+
T Consensus 295 ~v-s~~~~g~i~vvd~~~~~~l~~~~i~---------~----~~~~~~~~-~spd---g~~l~va~~~~~~v~v~D~~t- 355 (543)
T 1nir_A 295 IV-NVKETGKVLLVNYKDIDNLTVTSIG---------A----APFLHDGG-WDSS---HRYFMTAANNSNKVAVIDSKD- 355 (543)
T ss_dssp EE-EETTTTEEEEEECTTSSSCEEEEEE---------C----CSSCCCEE-ECTT---SCEEEEEEGGGTEEEEEETTT-
T ss_pred EE-EECCCCeEEEEEecCCCcceeEEec---------c----CcCccCce-ECCC---CCEEEEEecCCCeEEEEECCC-
Confidence 65 56778999999998876544 222 1 22345565 9998 664555666789999999998
Q ss_pred CCceEeeec----CCcceEEEEEeCC-CCeEEEec-CCCcEEEEecCC-------CeeeEeee-------eeeecCCCce
Q 021291 242 GIPLTAMKV----HLEPVLCLSIDES-CNGGISGG-ADQKIVLYNLDH-------STYVLFGI-------GFVCDQEGNK 301 (314)
Q Consensus 242 ~~~~~~~~~----h~~~v~~~~~~~~-~~~l~s~s-~dg~i~iw~~~~-------~~~~~~~~-------~~~~~~~~~~ 301 (314)
++++..+.. |......+ ++|+ +..+++++ .|++|.+||+++ .+.+..+. .+.++|++..
T Consensus 356 g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 356 RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 434 (543)
T ss_dssp TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence 788877774 55444443 4776 66677775 689999999998 56555532 2556777766
Q ss_pred ece
Q 021291 302 FGT 304 (314)
Q Consensus 302 ~~~ 304 (314)
+..
T Consensus 435 l~v 437 (543)
T 1nir_A 435 LYV 437 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=1.6e-20 Score=153.85 Aligned_cols=252 Identities=13% Similarity=0.118 Sum_probs=156.0
Q ss_pred CCCCceeEEEEccCCCEEEEecCC-CeEEEEeCC--CCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEeec-CCeEE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTG-GELRIWDTV--QHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGTVK 89 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~v~ 89 (314)
.|...+.+++|+|+|++|++++.+ +.|.+|+++ +++ .+..+..+. .+..++|+| ++++|++++. ++.|.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG---SLTHISTDH--QGQFVFVGSYNAGNVS 109 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS---CCSEEEECT--TSSEEEEEETTTTEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC---CCcEEEEcC--CCCEEEEEecCCCeEE
Confidence 477889999999999988888776 999999987 554 334444332 488999999 9898876654 88999
Q ss_pred EEeCCCCCCCCCCeeeeecc-eeeEEEeeeeeccccccccCCCCcceeeccC-Ccee-----eecCCCCCC---ceeccC
Q 021291 90 CWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETV-----DTDSLCDSK---DDVPAE 159 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~---~~~~~~ 159 (314)
+||+..+.... ........ ......+++................+|++.. .... ......... ++|+|+
T Consensus 110 ~~d~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPVG-VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEEE-EEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred EEECCCCcccc-ccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 99995322110 01111111 1222233333322222222345566777765 3321 111111122 889999
Q ss_pred CCceEEEeecCcCeEEEEecCC--Cce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEE
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~--~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (314)
++.+++ ++..++.|.+||+.. ++. ...+.. ...++. ....+..+. |+|+ |+.+++++..++.|++
T Consensus 189 g~~l~~-~~~~~~~i~~~~~~~~~g~~~~~~~~~~----~~~~~~--~~~~~~~i~-~s~d---g~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 189 EQYAYC-VNELNSSVDVWELKDPHGNIECVQTLDM----MPENFS--DTRWAADIH-ITPD---GRHLYACDRTASLITV 257 (343)
T ss_dssp SSEEEE-EETTTTEEEEEESSCTTSCCEEEEEEEC----SCTTCC--SCCCEEEEE-ECTT---SSEEEEEETTTTEEEE
T ss_pred CCEEEE-EeCCCCEEEEEEecCCCCcEEEEeeccc----cCcccc--ccCCccceE-ECCC---CCEEEEEecCCCEEEE
Confidence 987665 455689999999953 332 122210 000111 122455676 9998 5534556668999999
Q ss_pred EEccCC---CCceEeeecCCcceEEEEEeCCCCeEEEec-CCCcEEEEecC--CCe
Q 021291 236 WDIRNP---GIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLD--HST 285 (314)
Q Consensus 236 wd~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~iw~~~--~~~ 285 (314)
||+... .+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++ +++
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred EEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 999831 234444554444 88999999999887777 68999999554 554
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=6.2e-20 Score=149.78 Aligned_cols=239 Identities=10% Similarity=0.045 Sum_probs=156.5
Q ss_pred EEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec-CCeEEEEeCCCCCC-CCC
Q 021291 25 CFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGTVKCWDIENGGL-SSN 101 (314)
Q Consensus 25 ~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~ 101 (314)
.|.++++ .+++++.++.|++||..+++.+..+..+. ..+ .++|+| +++++++++. ++.|.+||+.+++. ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~- 77 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY--DFV-DTAITS--DCSNVVVTSDFCQTLVQIETQLEPPKVV- 77 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC--CEE-EEEECS--SSCEEEEEESTTCEEEEEECSSSSCEEE-
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC--Ccc-eEEEcC--CCCEEEEEeCCCCeEEEEECCCCceeEE-
Confidence 4555544 57788899999999999999988887655 346 999999 9887776655 89999999998865 22
Q ss_pred CeeeeecceeeEEEeeeeeccccccccCC-C--CcceeeccCCceeeecCCCCCC--ceeccCCCceEEEeecCcCe-EE
Q 021291 102 PSLTIKTNSYHFCKLSLVKEPYANAKQAN-E--PKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQLSE-VE 175 (314)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~-i~ 175 (314)
.......+.....+++.+.... ..... . ...+|++...........+... ++|+|+|+.++++ +..++. |.
T Consensus 78 -~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~i~ 154 (331)
T 3u4y_A 78 -AIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILI-DRSSANTVR 154 (331)
T ss_dssp -EEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEE-EETTTTEEE
T ss_pred -ecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEE-ecCCCceEE
Confidence 2222222222134444443333 22222 2 5667777766544432222222 9999999877664 444577 99
Q ss_pred EEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc---eEeeecCC
Q 021291 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP---LTAMKVHL 252 (314)
Q Consensus 176 vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~h~ 252 (314)
+|++.....+..... .. .........+. |+|+ |+.+++++..++.|++||+.+ ++. +..+.. .
T Consensus 155 ~~~~~~~g~~~~~~~-------~~-~~~~~~~~~~~-~spd---g~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~ 220 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQ-------EF-ISGGTRPFNIT-FTPD---GNFAFVANLIGNSIGILETQN-PENITLLNAVGT-N 220 (331)
T ss_dssp EEEECTTCCEEEEEE-------EE-ECSSSSEEEEE-ECTT---SSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-S
T ss_pred EEEECCCCcEeecCC-------cc-ccCCCCccceE-ECCC---CCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-C
Confidence 999875443321110 00 00122356676 9998 653556666789999999987 666 666664 4
Q ss_pred cceEEEEEeCCCCeEEEe-cCCCcEEEEecCCCee
Q 021291 253 EPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTY 286 (314)
Q Consensus 253 ~~v~~~~~~~~~~~l~s~-s~dg~i~iw~~~~~~~ 286 (314)
..+..++|+|+|++|+.+ ..++.|.+||+.+++.
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 667899999999976554 4578899999998876
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=3e-20 Score=152.71 Aligned_cols=224 Identities=10% Similarity=0.101 Sum_probs=146.5
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEec-CCCeEEEEeCCC-C--eEEEEEeccC-------CcccEEEEEEcccCCCCe
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGT-TGGELRIWDTVQ-H--RTVSSSWVHS-------AAHGIVSVATGPSIGLNK 78 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~ 78 (314)
.+..+..|...+..++|+|+|++|++++ .++.|.+|++.. + +.+..+.... ....+.+++|+| +++.
T Consensus 77 ~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp--dg~l 154 (347)
T 3hfq_A 77 KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP--DNRL 154 (347)
T ss_dssp EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT--TSCE
T ss_pred EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC--CCcE
Confidence 3444455778899999999999888877 789999999863 3 3333332211 112488999999 9886
Q ss_pred EEEeecCCeEEEEeCC-CCCCCCCCeeeeec--ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCce
Q 021291 79 VISQGRDGTVKCWDIE-NGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (314)
Q Consensus 79 l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (314)
+++...++.|.+||+. ++++.. ...... ..... .++
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~--~~~~~~~~g~~p~---------------------------------------~~~ 193 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSE--QSVLTMEAGFGPR---------------------------------------HLV 193 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEE--EEEEECCTTCCEE---------------------------------------EEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEE--eeeEEcCCCCCCc---------------------------------------eEE
Confidence 6666678899999998 333211 000000 00000 057
Q ss_pred eccCCCceEEEeecCcCeEEEEecCC--Cce--eeeecccccCCCCCcCC--CCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 156 VPAEGPKYMAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSS--KGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~vwd~~~--~~~--~~~~~~~~~~~~~~h~~--~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
|+|+|+.+++ ++..++.|.+|++.. ++. ...+. .... .....+..+. |+|+ |+.++++...
T Consensus 194 ~spdg~~l~v-~~~~~~~v~v~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~i~-~spd---G~~l~v~~~~ 260 (347)
T 3hfq_A 194 FSPDGQYAFL-AGELSSQIASLKYDTQTGAFTQLGIVK--------TIPADYTAHNGAAAIR-LSHD---GHFLYVSNRG 260 (347)
T ss_dssp ECTTSSEEEE-EETTTTEEEEEEEETTTTEEEEEEEEE--------SSCTTCCSCCEEEEEE-ECTT---SCEEEEEEET
T ss_pred ECCCCCEEEE-EeCCCCEEEEEEecCCCCceEEeeeee--------ecCCCCCCCCcceeEE-ECCC---CCEEEEEeCC
Confidence 9999986665 556679999999874 432 12222 1110 0113567777 9998 6634466677
Q ss_pred CCcEEEEEccCCC--CceEeeecCCcceEEEEEeCCCCeEEEecC-CCcEEEEec--CCCeeeEe
Q 021291 230 DGSILVWDIRNPG--IPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNL--DHSTYVLF 289 (314)
Q Consensus 230 dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~i~iw~~--~~~~~~~~ 289 (314)
++.|.+||+...+ ..+..+..+...+..++|+|+|++|++++. ++.|.+|++ ++++....
T Consensus 261 ~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 261 YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 8999999997322 445556666777899999999998877765 489999954 55655443
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=2.7e-21 Score=163.28 Aligned_cols=204 Identities=13% Similarity=0.077 Sum_probs=141.4
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCC----------eEEEEE-----eccCCcccEEEEEEcccCCCCeEE-
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----------RTVSSS-----WVHSAAHGIVSVATGPSIGLNKVI- 80 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----------~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~l~- 80 (314)
+...++.+++++++.++++++.|+ ++||+.... ..+... ..+. ..|.+++|+| ++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~sp--dg~~lav 109 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK--FPIHHLALSC--DNLTLSA 109 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS--SCEEEEEECT--TSCEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC--CcccEEEEcC--CCCEEEE
Confidence 345689999999999999999998 899874311 011110 1123 4599999999 999999
Q ss_pred ---EeecCCeEEEEeCCCCCC----CCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC
Q 021291 81 ---SQGRDGTVKCWDIENGGL----SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (314)
Q Consensus 81 ---s~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (314)
+++.|++|++||+++... ..++...... +.+|..
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~h~~ 150 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL---------------------------------------LKDAGG 150 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC---------------------------------------CCSGGG
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeec---------------------------------------cCCCCC
Confidence 889999999999876410 0011111111 111111
Q ss_pred ----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 154 ----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 154 ----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
++|+|++..+++ +++.||+|++||++++....... +| ...+.+++ |+|+ |. +|++|+.
T Consensus 151 ~V~~v~~~p~~~~~la-s~s~Dg~v~iwD~~~~~~~~~~~--------~~----~~~v~~v~-wspd---g~-~lasgs~ 212 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVA-VCLADGSIAVLQVTETVKVCATL--------PS----TVAVTSVC-WSPK---GK-QLAVGKQ 212 (434)
T ss_dssp SEEEEEECSSCTTEEE-EEETTSCEEEEEESSSEEEEEEE--------CG----GGCEEEEE-ECTT---SS-CEEEEET
T ss_pred ceEEEEECCCCCCEEE-EEECCCeEEEEEcCCCcceeecc--------CC----CCceeEEE-EcCC---CC-EEEEEcC
Confidence 679998555565 56679999999999886655444 44 44688887 9998 55 8999999
Q ss_pred CCcEEEEEccCCCCceEeeecC-------CcceEEEEEeCCCCeEEEe-cCCC------cEEEEecCCC
Q 021291 230 DGSILVWDIRNPGIPLTAMKVH-------LEPVLCLSIDESCNGGISG-GADQ------KIVLYNLDHS 284 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~-s~dg------~i~iw~~~~~ 284 (314)
||.|++||.+ +.....+..| ...|.+++|++++.++++. +.|| .+++|++...
T Consensus 213 dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 213 NGTVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TSCEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCcEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999999998 3444444433 3389999999998877443 3343 3899999865
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=4.4e-20 Score=166.72 Aligned_cols=238 Identities=9% Similarity=-0.055 Sum_probs=164.9
Q ss_pred CCceeEEEEccCCCEEEEecC-CC-----eEEEEeCCCCeEEEEEeccCCc----------------------ccEEEEE
Q 021291 18 RASVTDVCFHQTKPILFAGTT-GG-----ELRIWDTVQHRTVSSSWVHSAA----------------------HGIVSVA 69 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~-dg-----~v~iwd~~~~~~~~~~~~~~~~----------------------~~v~~~~ 69 (314)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+... ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 9999999999887777655432 2378999
Q ss_pred EcccCCCCeEEEeecCCeEEEEeCCCC---CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeee
Q 021291 70 TGPSIGLNKVISQGRDGTVKCWDIENG---GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (314)
Q Consensus 70 ~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (314)
|+| |+++|++++. +.|.+||+.++ +... +...........+++.+....... .....++++..+.....
T Consensus 116 ~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~---l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQ---LTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECT--TSSEEEEEET-TEEEEEESSSCSTTSCCB---CCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEEC
T ss_pred ECC--CCCEEEEEeC-CcEEEEECCCCCcceEEE---cccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEe
Confidence 999 9999999886 89999999987 4321 222223344455555544333222 23455666655543332
Q ss_pred cCCCC-------------------CCceeccCCCceEEEeecCcC---------------------------------eE
Q 021291 147 DSLCD-------------------SKDDVPAEGPKYMAVAGEQLS---------------------------------EV 174 (314)
Q Consensus 147 ~~~~~-------------------~~~~~~~~~~~~~~~~g~~d~---------------------------------~i 174 (314)
...+. ..++|+|||+.++.++. |+ .|
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~--d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI--DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE--ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE--cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 22222 22899999998765432 33 78
Q ss_pred EEEecCC-CceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec-----CCcEEEEEccCCCCceEee
Q 021291 175 EIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-----DGSILVWDIRNPGIPLTAM 248 (314)
Q Consensus 175 ~vwd~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~-----dg~i~vwd~~~~~~~~~~~ 248 (314)
.+||+.+ ++...... + ......+..+. | || |+ .|+++.. +..|++||+.+ ++....+
T Consensus 266 ~~~d~~~~~~~~~~~~--------~--~~~~~~~~~~~-~-pD---g~-~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~ 328 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDL--------G--KEQDIYLARVN-W-RD---PQ-HLSFQRQSRDQKKLDLVEVTLAS-NQQRVLA 328 (741)
T ss_dssp EEECSSTTCCCEEECC--------C--SCSSEEEEEEE-E-EE---TT-EEEEEEEETTSSEEEEEEEETTT-CCEEEEE
T ss_pred EEEECCCCCceEEecC--------C--CCcceEEEEEE-e-CC---CC-EEEEEEecccCCeEEEEEEECCC-CceEEEE
Confidence 8999988 76543322 1 01245677887 9 98 55 5665443 56899999998 6666666
Q ss_pred ecCCc----ceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 249 KVHLE----PVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 249 ~~h~~----~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
..+.. .+..++|+|+|+++++++.||.++||.++
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 65543 45689999999999999999988888776
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1.2e-19 Score=148.30 Aligned_cols=254 Identities=10% Similarity=0.040 Sum_probs=171.7
Q ss_pred CCceEEecCCC-C-ceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCC---cccEEEEEEcccCCCCeEEE
Q 021291 8 PDPVAVLRGHR-A-SVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~-~-~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s 81 (314)
++.++.+.... . .+..++|+|+|+++ +++..++.|.+||+.+++.+..+..... ...+.+++|+| ++++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~ 98 (337)
T 1pby_B 21 MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP--DGKTLAI 98 (337)
T ss_dssp TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT--TSSEEEE
T ss_pred CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC--CCCEEEE
Confidence 35566665322 2 58899999999765 5667789999999999988877764220 01367899999 9988888
Q ss_pred ee------------cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCC
Q 021291 82 QG------------RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL 149 (314)
Q Consensus 82 ~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (314)
++ .++.|.+||+.+++... .+.. ........+++........ .....++++...........
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETLSRRK--AFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTTEEEE--EEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECS
T ss_pred EecccccccccccccCceEEEEECCCCcEEE--EEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeec
Confidence 86 57999999998876432 1111 1122223333333222212 45566777776654433322
Q ss_pred CC--CCceeccCCCceEEEeecCcC-----------------------eEEEEecCCCceeeeecccccCCCCCcCCCCC
Q 021291 150 CD--SKDDVPAEGPKYMAVAGEQLS-----------------------EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR 204 (314)
Q Consensus 150 ~~--~~~~~~~~~~~~~~~~g~~d~-----------------------~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~ 204 (314)
.. ....|+|++..+++ ++..++ .|.+||+.+++.. .+... .+ .
T Consensus 173 ~~~~~~~~~s~dg~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~------~~----~ 240 (337)
T 1pby_B 173 QSWEAETYAQPDVLAVWN-QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR------IM----D 240 (337)
T ss_dssp TTTTTTTBCCCBCCCCCC-CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE------EC----S
T ss_pred cccCCCceeCCCccEEee-eccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC------CC----C
Confidence 22 22789999987654 333333 4689999988765 33210 12 2
Q ss_pred ceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 205 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 205 ~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
.....+. |+|+ |+ +++++ ++.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++.++.|++||++++
T Consensus 241 ~~~~~~~-~s~d---g~-~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 241 VFYFSTA-VNPA---KT-RAFGA--YNVLESFDLEK-NASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp SCEEEEE-ECTT---SS-EEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred CceeeEE-ECCC---CC-EEEEe--CCeEEEEECCC-CcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 3456676 9998 55 66666 68999999987 777776664 356789999999999998999999999999999
Q ss_pred eeeEee
Q 021291 285 TYVLFG 290 (314)
Q Consensus 285 ~~~~~~ 290 (314)
+.+..+
T Consensus 312 ~~~~~~ 317 (337)
T 1pby_B 312 EKKGQV 317 (337)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 877654
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.5e-20 Score=165.17 Aligned_cols=251 Identities=8% Similarity=-0.022 Sum_probs=166.9
Q ss_pred CCceeEEEEccCCCEEEEecC-CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec---CCeEEEEeC
Q 021291 18 RASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR---DGTVKCWDI 93 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~v~iwd~ 93 (314)
..+|.+++|+|||++||+++. ||+++||++++++..+ +..+.. ..+..++|+| | +.+++++. +...++|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~-~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPI-NSVLDPHYGV--G-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCC-SEECEECTTC--S-EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccc-cccccccCCC--C-eEEEEeccCCCCcceEEEEE
Confidence 567999999999999999887 9999999997666544 433331 3489999999 8 77777765 455666655
Q ss_pred CC--CCCCCCCeeeee-cceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC
Q 021291 94 EN--GGLSSNPSLTIK-TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 94 ~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (314)
.. .... . .+. ........+++.+..............+|++..+.............+|+|||+.++.++ .
T Consensus 96 ~~~~~g~~---~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~--~ 169 (582)
T 3o4h_A 96 NTSRPGEE---Q-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLG--F 169 (582)
T ss_dssp ETTSTTCC---E-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEE--E
T ss_pred eccCCCcc---c-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEE--E
Confidence 43 1111 1 111 112223355555544333333344444777766543222111112388999998765432 2
Q ss_pred c----CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCC--cEEEEEccCCCCc
Q 021291 171 L----SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILVWDIRNPGIP 244 (314)
Q Consensus 171 d----~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--~i~vwd~~~~~~~ 244 (314)
+ +.|++||+.+++.. .+. .| .+.+..+. |+|| |+ .|+++..++ .|++||+.+ ++.
T Consensus 170 ~~~~~~~i~~~d~~~g~~~-~l~--------~~----~~~~~~~~-~SpD---G~-~l~~~~~~~~~~i~~~d~~~-~~~ 230 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLR-VFD--------SG----EGSFSSAS-ISPG---MK-VTAGLETAREARLVTVDPRD-GSV 230 (582)
T ss_dssp EETTEEEEEEEETTTCCCE-EEC--------CS----SCEEEEEE-ECTT---SC-EEEEEECSSCEEEEEECTTT-CCE
T ss_pred cCCCCeEEEEEcCCCCCce-Eee--------cC----CCccccce-ECCC---CC-EEEEccCCCeeEEEEEcCCC-CcE
Confidence 3 67999999888754 444 34 34567777 9998 65 777888888 899999987 666
Q ss_pred eEeeecCCcceEEEE--------EeCCCCeEEEecCCCcEEEEecCCCeeeEe----eeeeeecCCCcee
Q 021291 245 LTAMKVHLEPVLCLS--------IDESCNGGISGGADQKIVLYNLDHSTYVLF----GIGFVCDQEGNKF 302 (314)
Q Consensus 245 ~~~~~~h~~~v~~~~--------~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~----~~~~~~~~~~~~~ 302 (314)
. .+.+|...+..++ |+|+|.++++++.|+.+++|++ ++.... ...++++ ++..+
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l 296 (582)
T 3o4h_A 231 E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLV 296 (582)
T ss_dssp E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEE
T ss_pred E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEE
Confidence 5 7777877777777 9999988899999999999999 554421 2344555 55544
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=6.2e-20 Score=165.73 Aligned_cols=263 Identities=12% Similarity=0.018 Sum_probs=169.2
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCC
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 97 (314)
.|.+++|+|||++|++++. +.|++||+.++. ....+..+. ..+.+++|+| ||++|+.++ ++.|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SP--DG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSP--KGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS--SCEEEEEECT--TSSEEEEEE-TTEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCC--cccccccCCC--CCCEEEEEe-CCcEEEEecCCCC
Confidence 4899999999999998886 899999998872 334455565 4499999999 999999887 4699999998875
Q ss_pred CCCCCeeeeecce----------------eeEEEeeeeeccccccccCCC------------------------------
Q 021291 98 LSSNPSLTIKTNS----------------YHFCKLSLVKEPYANAKQANE------------------------------ 131 (314)
Q Consensus 98 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~------------------------------ 131 (314)
... +....... .....+++.+...........
T Consensus 184 ~~~--~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 184 QMQ--LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp EEE--CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred EEE--eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 322 11111100 122334444333322222111
Q ss_pred --CcceeeccC-CceeeecCC-CCCC----ceeccCCCceEEEee---cCcCeEEEEecCCCceeeeecccccCCCCCcC
Q 021291 132 --PKDCYEREV-GETVDTDSL-CDSK----DDVPAEGPKYMAVAG---EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS 200 (314)
Q Consensus 132 --~~~~~~~~~-~~~~~~~~~-~~~~----~~~~~~~~~~~~~~g---~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~ 200 (314)
...++++.. ......... .+.. ++| |+|+.+++.+. ..+..|++||+.+++....+. .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--------~~~ 332 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH--------ETS 332 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE--------EEC
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE--------cCC
Confidence 223344444 332222211 2333 899 99988776443 235789999999988766665 222
Q ss_pred CCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEE-EEeCCCCeEE-EecCCC--cE
Q 021291 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-SIDESCNGGI-SGGADQ--KI 276 (314)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~-s~s~dg--~i 276 (314)
......+..+. |+|+ |+ ++++++.||.++||.++..+. ...+..|...|..+ .|+|+++.|+ +++.++ .+
T Consensus 333 ~~~~~~~~~~~-~spd---g~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 333 PTWVPLHNSLR-FLDD---GS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp SSCCCCCSCCE-ECTT---SC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred CCcCCcCCceE-ECCC---Ce-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 11011233555 9998 66 888899999888887764355 77788888889887 5999998764 555565 89
Q ss_pred EEEecCC-CeeeEe------eeeeeecCCCceecee
Q 021291 277 VLYNLDH-STYVLF------GIGFVCDQEGNKFGTT 305 (314)
Q Consensus 277 ~iw~~~~-~~~~~~------~~~~~~~~~~~~~~~~ 305 (314)
++|+++. ++.... ....+++|+|..++..
T Consensus 407 ~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 407 QIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp EEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEE
T ss_pred EEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEE
Confidence 9999864 332222 2245677888766543
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=5.3e-20 Score=165.69 Aligned_cols=225 Identities=9% Similarity=0.010 Sum_probs=155.6
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCc-ccEEEEEEcccCCCCeEEEeecC---------CeE
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGRD---------GTV 88 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~d---------g~v 88 (314)
..+.+++|+|||+++++ +.||+|++||+.+++....+..+... ..|.+++|+| ||++|++++.+ +.|
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeE
Confidence 34788999999997776 78999999999999888777666420 1389999999 99999998764 788
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEee
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (314)
.+||+.+++.. .+......... -..++|+|+|+.++. +
T Consensus 94 ~~~d~~~~~~~-----~l~~~~~~~~~-----------------------------------~~~~~~SPdG~~la~--~ 131 (723)
T 1xfd_A 94 VLSKIPHGDPQ-----SLDPPEVSNAK-----------------------------------LQYAGWGPKGQQLIF--I 131 (723)
T ss_dssp EEEESSSCCCE-----ECCCTTCCSCC-----------------------------------CSBCCBCSSTTCEEE--E
T ss_pred EEEECCCCceE-----eccCCcccccc-----------------------------------ccccEECCCCCEEEE--E
Confidence 89999987641 11110000000 000569999987664 3
Q ss_pred cCcCeEEEEecCCCceeeeecccccCCCCCcCCCC--------------CceeeeEEEecCCCCCCceEEEEeecCC---
Q 021291 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG--------------RGMCMAVQAYLPSKSQGFVNVLAGYEDG--- 231 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~--------------~~~~~~~~~~~p~~~~g~~~l~~g~~dg--- 231 (314)
+ ++.|++||+.+++...... .+.... .+...++. |+|| |+ .|++++.|+
T Consensus 132 ~-~~~i~~~~~~~g~~~~~~~--------~~~~~~~~~g~~~~v~~ee~~~~~~~~~-~SpD---g~-~la~~~~~~~~~ 197 (723)
T 1xfd_A 132 F-ENNIYYCAHVGKQAIRVVS--------TGKEGVIYNGLSDWLYEEEILKTHIAHW-WSPD---GT-RLAYAAINDSRV 197 (723)
T ss_dssp E-TTEEEEESSSSSCCEEEEC--------CCBTTTEEEEECCHHHHHTTSSSSEEEE-ECTT---SS-EEEEEEEECTTS
T ss_pred E-CCeEEEEECCCCceEEEec--------CCCCCceECcccceeEEEEeccCcceEE-ECCC---CC-EEEEEEECCCcc
Confidence 3 3789999999887655444 221111 11235676 9998 55 677766443
Q ss_pred -------------------------------cEEEEEccCCCCceEeeecC------CcceEEEEEeCCCCeEEEecC--
Q 021291 232 -------------------------------SILVWDIRNPGIPLTAMKVH------LEPVLCLSIDESCNGGISGGA-- 272 (314)
Q Consensus 232 -------------------------------~i~vwd~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~-- 272 (314)
.|++||+.+ ++....+..+ ...+..++|+|||++|++.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 276 (723)
T 1xfd_A 198 PIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA 276 (723)
T ss_dssp CEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT
T ss_pred ceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC
Confidence 799999987 5554555544 668999999999998876643
Q ss_pred --CCcEEEEecCCCeeeEee------------eeeeecCCCceec
Q 021291 273 --DQKIVLYNLDHSTYVLFG------------IGFVCDQEGNKFG 303 (314)
Q Consensus 273 --dg~i~iw~~~~~~~~~~~------------~~~~~~~~~~~~~ 303 (314)
+..|++||+.+++..... ....++|+|..+.
T Consensus 277 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 277 QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence 357999999988754421 1456778887544
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=2e-18 Score=141.93 Aligned_cols=240 Identities=10% Similarity=0.061 Sum_probs=161.2
Q ss_pred CCceEEecCCCCceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCCcc-------cEEEEEEcccCCCCeE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAH-------GIVSVATGPSIGLNKV 79 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~l 79 (314)
++.++.+.. ...+..++|+|+|+++ ++...++.|.+||..+++.+..+..+.... .+.+++|+| +++++
T Consensus 79 ~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l 155 (353)
T 3vgz_A 79 LEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD--ATNTV 155 (353)
T ss_dssp CCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET--TTTEE
T ss_pred CeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC--CCCEE
Confidence 445555553 3457889999999855 556668999999999999888887654211 278899999 88887
Q ss_pred EEee--cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCC---CCCC-
Q 021291 80 ISQG--RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL---CDSK- 153 (314)
Q Consensus 80 ~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 153 (314)
+.++ .++.|.+||..+++... .+...........+++...... .....+....++....+....... ++..
T Consensus 156 ~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 156 YISGIGKESVIWVVDGGNIKLKT--AIQNTGKMSTGLALDSEGKRLY-TTNADGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp EEEEESSSCEEEEEETTTTEEEE--EECCCCTTCCCCEEETTTTEEE-EECTTSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred EEEecCCCceEEEEcCCCCceEE--EecCCCCccceEEECCCCCEEE-EEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 7765 47899999999876533 2221122222233333332222 222234555667666654433222 1222
Q ss_pred ---ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 ---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
++|+|+++.+++ +...++.|.+||+.+++.+..+.. +. ...+. |+|+ |+.++++...+
T Consensus 233 ~~~~~~s~dg~~l~~-~~~~~~~v~~~d~~~~~~~~~~~~-------~~-------~~~~~-~s~d---g~~l~v~~~~~ 293 (353)
T 3vgz_A 233 FINISLDTARQRAFI-TDSKAAEVLVVDTRNGNILAKVAA-------PE-------SLAVL-FNPA---RNEAYVTHRQA 293 (353)
T ss_dssp EEEEEEETTTTEEEE-EESSSSEEEEEETTTCCEEEEEEC-------SS-------CCCEE-EETT---TTEEEEEETTT
T ss_pred cceEEECCCCCEEEE-EeCCCCEEEEEECCCCcEEEEEEc-------CC-------CceEE-ECCC---CCEEEEEECCC
Confidence 799999987765 455579999999999998877762 11 13455 9998 55355566679
Q ss_pred CcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCC
Q 021291 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ 274 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 274 (314)
+.|.+||..+ ++.+..+.. ...+.+++|++++++|+.+..++
T Consensus 294 ~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 294 GKVSVIDAKS-YKVVKTFDT-PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TEEEEEETTT-TEEEEEEEC-CSEEEEEEECTTSCEEEEEEECC
T ss_pred CeEEEEECCC-CeEEEEEec-CCCCCeEEEcCCCCEEEEEEccc
Confidence 9999999987 777777765 34779999999999776666654
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=6.3e-19 Score=144.70 Aligned_cols=248 Identities=10% Similarity=0.093 Sum_probs=158.6
Q ss_pred EEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCC
Q 021291 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSN 101 (314)
Q Consensus 23 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~ 101 (314)
.+++++++.++++++.++.|++||+.+++.+..+..+.. ..+..++|+| +++.++ +...++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~--dg~~~~v~~~~~~~i~~~d~~t~~~~~- 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTF- 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEE-
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCC-CCCceeEECC--CCCEEEEEeCCCCcEEEEeCCCCcEEE-
Confidence 456788888999999999999999999998888875531 1367999999 888655 55678999999999876432
Q ss_pred Ceeeeecc------eeeEEEeeeeeccccccccC-----------CCCcceeeccCCceee--ecCCCCCC---ceeccC
Q 021291 102 PSLTIKTN------SYHFCKLSLVKEPYANAKQA-----------NEPKDCYEREVGETVD--TDSLCDSK---DDVPAE 159 (314)
Q Consensus 102 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~ 159 (314)
.+..... ......+++.+......... .....++++....... .....+.. ++|+|+
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 -HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp -EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred -EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 1121110 01223333333222222211 2455566665532111 11111112 779999
Q ss_pred CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCc-----------CCC--------------------------
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF-----------SSK-------------------------- 202 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h-----------~~~-------------------------- 202 (314)
|+ +++ ++ +.|.+||+.+++....+........ .+ ...
T Consensus 159 g~-l~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 159 GS-LYV--AG--PDIYKMDVKTGKYTVALPLRNWNRK-GYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp SC-EEE--ES--SSEEEECTTTCCEEEEECSTTCCCT-TBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred Cc-EEE--cc--CcEEEEeCCCCceeccccccccCCc-cccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 98 554 33 3499999999887776652110000 00 000
Q ss_pred --------------------CCceeeeEEEecC-CCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEe
Q 021291 203 --------------------GRGMCMAVQAYLP-SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID 261 (314)
Q Consensus 203 --------------------~~~~~~~~~~~~p-~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~ 261 (314)
.......+. |+| + |+ +++++ ++.|.+||+.+ ++.+..+.. ...+.+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~sp~d---g~-~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s 303 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGL-RSPKD---PN-QIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFD 303 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEE-ECSSC---TT-EEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEEC
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeE-ecCCC---CC-EEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEEC
Confidence 001223444 667 6 55 66666 78999999998 777766663 3457899999
Q ss_pred CCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 262 ESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 262 ~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+++++|++++.++.|++||+++++.+..+
T Consensus 304 ~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 304 KKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEecCCCeEEEEeccccceeeee
Confidence 99998988888999999999999877654
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=2.1e-19 Score=151.72 Aligned_cols=163 Identities=9% Similarity=0.039 Sum_probs=115.4
Q ss_pred CCCCceeEEEEccCCCEEE----EecCCCeEEEEeCCCC--------e---EEEEEeccCCcccEEEEEEcccCC-CCeE
Q 021291 16 GHRASVTDVCFHQTKPILF----AGTTGGELRIWDTVQH--------R---TVSSSWVHSAAHGIVSVATGPSIG-LNKV 79 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~----s~~~dg~v~iwd~~~~--------~---~~~~~~~~~~~~~v~~~~~~~~~~-~~~l 79 (314)
.|...|.+++|+|+|++|+ +|+.|+.|+|||+.++ + .+..+.+|. ..|.+++|+| + +++|
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~p--~~~~~l 165 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG--GMVIDMKWNP--TVPSMV 165 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG--GSEEEEEECS--SCTTEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC--CceEEEEECC--CCCCEE
Confidence 3677899999999999999 8999999999998654 2 244455677 4599999999 6 7899
Q ss_pred EEeecCCeEEEEeCCCCCCCCCCeeeeecce-eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceecc
Q 021291 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (314)
Q Consensus 80 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (314)
++++.||+|++||++++.. ......+. ...+ ++|+|
T Consensus 166 as~s~Dg~v~iwD~~~~~~----~~~~~~~~~~v~~---------------------------------------v~wsp 202 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVK----VCATLPSTVAVTS---------------------------------------VCWSP 202 (434)
T ss_dssp EEEETTSCEEEEEESSSEE----EEEEECGGGCEEE---------------------------------------EEECT
T ss_pred EEEECCCeEEEEEcCCCcc----eeeccCCCCceeE---------------------------------------EEEcC
Confidence 9999999999999987632 11111111 1111 67999
Q ss_pred CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCC---CCCceeeeEEEecCCCCCCceEEEEeecCC----
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSS---KGRGMCMAVQAYLPSKSQGFVNVLAGYEDG---- 231 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~---~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg---- 231 (314)
+|+.++ +|+.||.|++||++ ++....+. .|.. .....+.++. |+++ +.++++....+|
T Consensus 203 dg~~la--sgs~dg~v~iwd~~-~~~~~~~~--------~~~~~~~~~~~~v~~v~-w~~~---~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 203 KGKQLA--VGKQNGTVVQYLPT-LQEKKVIP--------CPPFYESDHPVRVLDVL-WIGT---YVFAIVYAAADGTLET 267 (434)
T ss_dssp TSSCEE--EEETTSCEEEECTT-CCEEEEEC--------CCTTCCTTSCEEEEEEE-EEET---TEEEEEEEETTCCSSS
T ss_pred CCCEEE--EEcCCCcEEEEccC-Cccccccc--------CCcccCCCCceeEEEEE-EecC---ceEEEEEccCCCccCC
Confidence 987655 56679999999998 55555554 2221 1234788887 9986 442333344443
Q ss_pred --cEEEEEccC
Q 021291 232 --SILVWDIRN 240 (314)
Q Consensus 232 --~i~vwd~~~ 240 (314)
.+++|+++.
T Consensus 268 ~~~v~i~~l~~ 278 (434)
T 2oit_A 268 SPDVVMALLPK 278 (434)
T ss_dssp CCEEEEEECCC
T ss_pred CCceEEEEecc
Confidence 389999986
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.7e-18 Score=142.22 Aligned_cols=237 Identities=13% Similarity=0.114 Sum_probs=146.5
Q ss_pred cCCCCceeEEEEccCCCEEEEecC---CCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEEEee-cCCeE
Q 021291 15 RGHRASVTDVCFHQTKPILFAGTT---GGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGTV 88 (314)
Q Consensus 15 ~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~v 88 (314)
..+...+..++|+|||+ |++++. ++.|.+|++.+++ .+..+..+. ..+..++|+| ++++|++++ .++.|
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~p~~~a~sp--dg~~l~~~~~~~~~v 110 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG--TPPAYVAVDE--ARQLVYSANYHKGTA 110 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES--CCCSEEEEET--TTTEEEEEETTTTEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC--CCCEEEEECC--CCCEEEEEeCCCCEE
Confidence 34556788899999998 555443 6899999997765 344444454 3488999999 999888887 68999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC-ceeccCCCceEEEe
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-DDVPAEGPKYMAVA 167 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 167 (314)
.+||+....... .......... .+. . + ....+.. ++|+|+|+ +++ +
T Consensus 111 ~v~~~~~~g~~~-~~~~~~~~~~---------~p~-----~---------~-------~~~~~~~~~~~spdg~-l~v-~ 157 (347)
T 3hfq_A 111 EVMKIAADGALT-LTDTVQHSGH---------GPR-----P---------E-------QDGSHIHYTDLTPDNR-LAV-I 157 (347)
T ss_dssp EEEEECTTSCEE-EEEEEECCCC---------CSS-----T---------T-------CSSCCEEEEEECTTSC-EEE-E
T ss_pred EEEEeCCCCCee-ecceeecCCC---------CCC-----c---------c-------ccCCCceEEEECCCCc-EEE-E
Confidence 999996422111 0101100000 000 0 0 0000000 67999998 554 5
Q ss_pred ecCcCeEEEEecC-CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC-CCc-
Q 021291 168 GEQLSEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP- 244 (314)
Q Consensus 168 g~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~- 244 (314)
+..++.|.+||+. +++........ .+ .......+. |+|+ |+.+++++..++.|.+|+++.. ++.
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~------~~---~g~~p~~~~-~spd---g~~l~v~~~~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLT------ME---AGFGPRHLV-FSPD---GQYAFLAGELSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEE------CC---TTCCEEEEE-ECTT---SSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEE------cC---CCCCCceEE-ECCC---CCEEEEEeCCCCEEEEEEecCCCCceE
Confidence 6667899999998 45432211100 11 122345676 9998 6645556677899999998741 322
Q ss_pred -eEeeecCC------cceEEEEEeCCCCeE-EEecCCCcEEEEecCCC---eeeEe-------eeeeeecCCCcee
Q 021291 245 -LTAMKVHL------EPVLCLSIDESCNGG-ISGGADQKIVLYNLDHS---TYVLF-------GIGFVCDQEGNKF 302 (314)
Q Consensus 245 -~~~~~~h~------~~v~~~~~~~~~~~l-~s~s~dg~i~iw~~~~~---~~~~~-------~~~~~~~~~~~~~ 302 (314)
+..+.... ..+..++|+|+|++| ++...++.|.+|+++.. +.+.. ..+++++|+|..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 225 QLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp EEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred EeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 22333222 358899999999977 56667899999999732 22222 2356778888744
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.6e-18 Score=141.84 Aligned_cols=250 Identities=10% Similarity=0.103 Sum_probs=149.8
Q ss_pred EEEEecCCCeEEEEeCC-CC--eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-CeEEEEeCC--CCCCCCCCeee
Q 021291 32 ILFAGTTGGELRIWDTV-QH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-GTVKCWDIE--NGGLSSNPSLT 105 (314)
Q Consensus 32 ~l~s~~~dg~v~iwd~~-~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~~~~~~~~~ 105 (314)
++++++.|+.|++||+. ++ +.+..+ .+. ..+.+++|+| ++++|++++.+ +.|.+|++. +++... ...
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~~~--~~~ 79 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVP--GQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALTF--AAE 79 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECS--SCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEEE--EEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecC--CCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCceee--ccc
Confidence 44555889999999985 33 333333 344 3488999999 99988888876 999999998 444221 112
Q ss_pred eecc-eeeEEEeeeeeccccccccCCCCcceeeccCCc--eeeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEec
Q 021291 106 IKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGE--TVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDL 179 (314)
Q Consensus 106 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~ 179 (314)
+... ......+++............+...+|++..+. ........+.. ++|+|+++.+++ ++..++.|.+||+
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 80 SALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWV-PALKQDRICLFTV 158 (343)
T ss_dssp EECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEE-EEGGGTEEEEEEE
T ss_pred cccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEE-ecCCCCEEEEEEe
Confidence 2211 223333443333222333334556677774221 12222222222 899999987765 4445799999999
Q ss_pred CC-Cceeeee--cccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC-CCc--eEeee----
Q 021291 180 NT-AERCTRL--HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP--LTAMK---- 249 (314)
Q Consensus 180 ~~-~~~~~~~--~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~--~~~~~---- 249 (314)
.+ ++..... ... .+ ....+..+. |+|+ |+.+++++..++.|.+||++.. +.. ...+.
T Consensus 159 ~~~~~~~~~~~~~~~------~~---~~~~~~~~~-~~pd---g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVT------TV---EGAGPRHMV-FHPN---EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp CTTSCEEEEEEEEEE------CS---TTCCEEEEE-ECTT---SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred cCCCceeeecccccc------cC---CCCCcceEE-ECCC---CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc
Confidence 87 5443211 100 11 122455676 9998 5534456668899999999631 222 22222
Q ss_pred cC--CcceEEEEEeCCCCeEE-EecCCCcEEEEecCC--C--eeeEe------eeeeeecCCCcee
Q 021291 250 VH--LEPVLCLSIDESCNGGI-SGGADQKIVLYNLDH--S--TYVLF------GIGFVCDQEGNKF 302 (314)
Q Consensus 250 ~h--~~~v~~~~~~~~~~~l~-s~s~dg~i~iw~~~~--~--~~~~~------~~~~~~~~~~~~~ 302 (314)
++ ...+..++|+|++++|+ ++..++.|.+|+++. + +.+.. ...++++++|..+
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYL 291 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEE
Confidence 11 23567899999998776 566899999999983 2 22222 2345677777643
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=2.3e-17 Score=136.22 Aligned_cols=250 Identities=8% Similarity=0.009 Sum_probs=152.1
Q ss_pred CCCceeEEEEccCCCEEEEecCC----CeEEEEeCCC--CeE--EEEEeccCCcccEEEEEEcccCCCCeEEEee-cCCe
Q 021291 17 HRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQ--HRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGT 87 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~d----g~v~iwd~~~--~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~ 87 (314)
|...+..++|+|||++|++++.+ +.|.+|+++. ++. +.....+. .....+++ ++++|++++ .++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~~----dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLTT----NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEEE----CSSEEEEEETTTTE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEEE----CCCEEEEEECCCCE
Confidence 66778889999999999998876 7999998865 443 33333233 33667777 346666555 6889
Q ss_pred EEEEeCCCCCCCCCCeeeee--c----------ceeeEEEeeeeeccccccccCCCCcceeeccCCce------------
Q 021291 88 VKCWDIENGGLSSNPSLTIK--T----------NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET------------ 143 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 143 (314)
|.+|++.............. . ...+...+++.+..............+|++.....
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 99999976543321111111 0 01133444444433333333344556666654321
Q ss_pred -eeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCC
Q 021291 144 -VDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (314)
Q Consensus 144 -~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~ 217 (314)
.......... ++|+|+|+.+++ ++..++.|.+||+.+++. +..+. .... .......+. |+|+
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg~~l~v-~~~~~~~v~v~~~~~g~~~~~~~~~--------~~~~-~~~~~~~i~-~spd- 269 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDGKFAYL-INEIGGTVIAFRYADGMLDEIQTVA--------ADTV-NAQGSGDIH-LSPD- 269 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEE-EETTTCEEEEEEEETTEEEEEEEEE--------SCSS-CCCCEEEEE-ECTT-
T ss_pred ccceecCCCCCCeEEEEcCCCCEEEE-EcCCCCeEEEEEecCCceEEeEEEe--------cCCC-CCCCcccEE-ECCC-
Confidence 1112222222 899999987665 455579999999987654 22222 1111 112346776 9998
Q ss_pred CCCceEEEEee-c-CCcEEEEEccC-CCC--ceEeeecCCcceEEEEEeCCCCeEEEec-CCCcEEEEecC--CCeeeE
Q 021291 218 SQGFVNVLAGY-E-DGSILVWDIRN-PGI--PLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLD--HSTYVL 288 (314)
Q Consensus 218 ~~g~~~l~~g~-~-dg~i~vwd~~~-~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~iw~~~--~~~~~~ 288 (314)
|+ +|+++. . ++.|.+|+++. .+. .+..+.. ...+..++|+|+|++|++++ .++.|.+|+++ +++...
T Consensus 270 --g~-~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 270 --GK-YLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp --SS-EEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred --CC-EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 66 565544 4 58999999962 133 3444444 55788999999999887776 67899997554 555443
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=1.2e-18 Score=156.58 Aligned_cols=264 Identities=11% Similarity=-0.036 Sum_probs=165.4
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCC---
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--- 95 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~--- 95 (314)
..|.+++|+|| +.++.+ .|+.|++||+.+++..... .+. ..+.+++|+| ||+.|+++ .|+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~-~~~--~~~~~~~~Sp--dG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLF-DTN--EETASLDFSP--VGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEE-CCT--TCCTTCEECT--TSSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEcc-CCc--ccccCCcCCC--CCCEEEEE-ECCeEEEEecCcccc
Confidence 57999999999 555554 4599999999988765443 344 3488999999 99999985 689999999988
Q ss_pred --CCCCCCCeeeeecce--------------eeEEEeeeeecccccccc-------------------------------
Q 021291 96 --GGLSSNPSLTIKTNS--------------YHFCKLSLVKEPYANAKQ------------------------------- 128 (314)
Q Consensus 96 --~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~------------------------------- 128 (314)
++... +....... .....+++.+........
T Consensus 154 ~~g~~~~--~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 154 GMSRAIA--VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp CCCCCEE--SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cCCCcEE--eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 65422 11111110 123334444333222211
Q ss_pred -CCCCcceeeccCCceeeecCC-CCCC----ceeccCCCceEEEeecC---cCeEEEEecCCCceeeeecccccCCCCCc
Q 021291 129 -ANEPKDCYEREVGETVDTDSL-CDSK----DDVPAEGPKYMAVAGEQ---LSEVEIWDLNTAERCTRLHQNSCGGSPNF 199 (314)
Q Consensus 129 -~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~g~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~h 199 (314)
......+|++..+........ .+.. ++|+|+|+.+++.+... +..|++||+.+++....+... .+
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~------~~ 305 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE------TD 305 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE------EC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc------cC
Confidence 112344555555543322221 2333 89999998776533221 138999999998443333210 11
Q ss_pred CCCCCceeeeEEEecC--CCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEE-EEEeCCCCeEEEe-cCCC-
Q 021291 200 SSKGRGMCMAVQAYLP--SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC-LSIDESCNGGISG-GADQ- 274 (314)
Q Consensus 200 ~~~~~~~~~~~~~~~p--~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~-s~dg- 274 (314)
.. ....+..+. |+| + |+ +++++..|+.++||+++..+..+..+..|...+.. ++|+|+++.|+.+ +.++
T Consensus 306 ~~-~~~~~~~~~-~sp~~d---g~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 306 KH-YVEPLHPLT-FLPGSN---NQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp SS-CCCCCSCCE-ECTTCS---SE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CC-eECccCCce-eecCCC---CE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 11 111234455 999 7 65 88899999999999987436777888888888887 7999999877554 4444
Q ss_pred ---cEEEEecCCCeeeEe-----eeeeeecCCCceece
Q 021291 275 ---KIVLYNLDHSTYVLF-----GIGFVCDQEGNKFGT 304 (314)
Q Consensus 275 ---~i~iw~~~~~~~~~~-----~~~~~~~~~~~~~~~ 304 (314)
.|..||+++++.... ....+++|+|..++.
T Consensus 380 ~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 380 LERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp TCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEE
T ss_pred ceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEE
Confidence 677777776642221 234567788876654
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=1.4e-18 Score=156.37 Aligned_cols=279 Identities=9% Similarity=-0.060 Sum_probs=165.4
Q ss_pred CCceEEecCCCC---ceeEEEEccCCCEEEEecCC---------CeEEEEeCCCCeEEEEEeccC-CcccEEEEEEcccC
Q 021291 8 PDPVAVLRGHRA---SVTDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSI 74 (314)
Q Consensus 8 ~~~~~~l~~h~~---~v~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 74 (314)
++....+.+|.. .|.+++|||||++|++++.+ +.|.+||+.+++. ..+.... +...+..++|+|
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-- 123 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-- 123 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS--
T ss_pred CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC--
Confidence 455667777765 49999999999999998764 7889999998876 3333222 113388999999
Q ss_pred CCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeeccee------------------eEEEeeeeeccccccccCC------
Q 021291 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSY------------------HFCKLSLVKEPYANAKQAN------ 130 (314)
Q Consensus 75 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~------ 130 (314)
||+.|+.++. +.|++||+.+++... +........ ....+++.+..........
T Consensus 124 dG~~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 124 KGQQLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp STTCEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred CCCEEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 9999999886 799999999876432 111111111 2344444443332222111
Q ss_pred ---------------------------CCcceeeccCCceeeecCCCC------CC----ceeccCCCceEEEee--cCc
Q 021291 131 ---------------------------EPKDCYEREVGETVDTDSLCD------SK----DDVPAEGPKYMAVAG--EQL 171 (314)
Q Consensus 131 ---------------------------~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~g--~~d 171 (314)
....+|++....... .+..+ .. ++|+|||+.++..+. ..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~-~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 279 (723)
T 1xfd_A 201 ELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL-EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNV 279 (723)
T ss_dssp EECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE-ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCE
T ss_pred EeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE-EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCe
Confidence 123344544443211 22222 22 899999985543322 234
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE-eecCC------cEEEEEccCCCC-
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA-GYEDG------SILVWDIRNPGI- 243 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~-g~~dg------~i~vwd~~~~~~- 243 (314)
..|++||+.+++....+.. .+..........+. |+|+ |+.+++. +..++ .|++||....+.
T Consensus 280 ~~i~~~d~~~g~~~~~~~~-------~~~~~~~~~~~~~~-~spd---g~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 348 (723)
T 1xfd_A 280 SILTLCDATTGVCTKKHED-------ESEAWLHRQNEEPV-FSKD---GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN 348 (723)
T ss_dssp EEEEEEETTTCCEEEEEEE-------ECSSCCCCCCCCCE-ECTT---SCSEEEEEEECCSSSSCEEEEEEECSSCCSSS
T ss_pred EEEEEEeCCCCcceEEEEe-------ccCCEEeccCCCce-EcCC---CCeEEEEEecccCCCcceeEEEEEeccCCCCc
Confidence 6899999999887665542 12111110012455 9998 5424443 56677 577777323233
Q ss_pred -ceEeeecCCcceEE-EEEeCCCCeEEEecCC---CcEEEEecCCCe--eeEe----------eeeeeecCCCceece
Q 021291 244 -PLTAMKVHLEPVLC-LSIDESCNGGISGGAD---QKIVLYNLDHST--YVLF----------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 244 -~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~d---g~i~iw~~~~~~--~~~~----------~~~~~~~~~~~~~~~ 304 (314)
+...+..+...+.. ++|+|+|+.|+..+.+ +.+++|+++... .... ...++++|+|..++.
T Consensus 349 ~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 349 DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 14455544444554 6999999998765554 789999986432 1111 234667888876654
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=6.6e-18 Score=135.08 Aligned_cols=205 Identities=8% Similarity=0.035 Sum_probs=136.9
Q ss_pred EecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCC-CCCCCCCeeeeecceeeE
Q 021291 35 AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN-GGLSSNPSLTIKTNSYHF 113 (314)
Q Consensus 35 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~ 113 (314)
+++.|+.|++||+.+++... +..|. ..|.+++|+| ++++|++++ ++.|++||+.+ ++... ........
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~--~~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~----~~~~~~~~- 85 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTP--ELFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEK----VDTGFATI- 85 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEES--SCCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEE----CCCTTCCC-
T ss_pred CCCcceeEEEEeCCCCceee-eccCC--cceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceE----eccccccc-
Confidence 45789999999999887664 44566 4499999999 999999877 78999999988 65321 11110000
Q ss_pred EEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcC--eEEEEecCCCceeeeeccc
Q 021291 114 CKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQN 191 (314)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~--~i~vwd~~~~~~~~~~~~~ 191 (314)
. -..++|+|+++.+++.....++ .|..|+..++. ...+.
T Consensus 86 ~------------------------------------~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-- 126 (297)
T 2ojh_A 86 C------------------------------------NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-- 126 (297)
T ss_dssp B------------------------------------CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--
T ss_pred c------------------------------------ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--
Confidence 0 0006799999876654322333 45555555544 33333
Q ss_pred ccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEec
Q 021291 192 SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 192 ~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 271 (314)
.+ ..+..+. |+|+ ++.+++++..++.+++|+++........+..|...+.+++|+|++++|+.++
T Consensus 127 ------~~-----~~~~~~~-~spd---g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 127 ------KN-----LPSYWHG-WSPD---GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp ------SS-----SSEEEEE-ECTT---SSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred ------cC-----CCccceE-ECCC---CCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 11 1356666 9998 5534558889999999997643455667778888999999999999877665
Q ss_pred -CCCcEEEEecC-CCeeeEe-------eeeeeecCCCceece
Q 021291 272 -ADQKIVLYNLD-HSTYVLF-------GIGFVCDQEGNKFGT 304 (314)
Q Consensus 272 -~dg~i~iw~~~-~~~~~~~-------~~~~~~~~~~~~~~~ 304 (314)
.|+.+++|+++ .+..+.. .....++|+|..+..
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEE
Confidence 58999999886 3333332 233567788876543
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=2.2e-18 Score=154.80 Aligned_cols=250 Identities=12% Similarity=0.010 Sum_probs=159.1
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC-----CeEEEEEeccCCc------------ccEEEEEEcc
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAA------------HGIVSVATGP 72 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~------------~~v~~~~~~~ 72 (314)
....+..|...+.+++|+|||++|+++ .|+.|++||+.+ ++.......+... ..+.+++|+|
T Consensus 112 ~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp 190 (706)
T 2z3z_A 112 KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP 190 (706)
T ss_dssp EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT
T ss_pred ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC
Confidence 344556677889999999999999985 789999999998 7766544333321 0147899999
Q ss_pred cCCCCeEEEee---------------------------------cCCeEEEEeCCCCCCCCCCeee--eecceeeEEEee
Q 021291 73 SIGLNKVISQG---------------------------------RDGTVKCWDIENGGLSSNPSLT--IKTNSYHFCKLS 117 (314)
Q Consensus 73 ~~~~~~l~s~~---------------------------------~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~ 117 (314)
|+++|++++ .+..|.+||+.+++... +.. .+........++
T Consensus 191 --Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~s 266 (706)
T 2z3z_A 191 --KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY--LQTGEPKEKFLTNLSWS 266 (706)
T ss_dssp --TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE--CCCCSCTTCEEEEEEEC
T ss_pred --CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe--eccCCCCceeEeeEEEE
Confidence 999999887 44689999999876422 111 111223344444
Q ss_pred eeeccccccccCC----CCcceeeccCCceeeecC----CCC----CCceecc--CCCceEEEeecCcCeEEEEecC-CC
Q 021291 118 LVKEPYANAKQAN----EPKDCYEREVGETVDTDS----LCD----SKDDVPA--EGPKYMAVAGEQLSEVEIWDLN-TA 182 (314)
Q Consensus 118 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~--~~~~~~~~~g~~d~~i~vwd~~-~~ 182 (314)
+.+.......... .....++...+....... ... ..++|+| +|+ +++ +++.|+.++||++. ++
T Consensus 267 pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~-~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 267 PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIW-QSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEE-EECTTSSCEEEEEETTS
T ss_pred CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEE-EEccCCccEEEEEECCC
Confidence 4443322222211 234455665552211111 111 2279999 887 343 56668889999876 55
Q ss_pred ceeeeecccccCCCCCcCCCCCceeee-EEEecCCCCCCceEEEEeecCC----cEEEEEccCCCCceEeeecCCcceEE
Q 021291 183 ERCTRLHQNSCGGSPNFSSKGRGMCMA-VQAYLPSKSQGFVNVLAGYEDG----SILVWDIRNPGIPLTAMKVHLEPVLC 257 (314)
Q Consensus 183 ~~~~~~~~~~~~~~~~h~~~~~~~~~~-~~~~~p~~~~g~~~l~~g~~dg----~i~vwd~~~~~~~~~~~~~h~~~v~~ 257 (314)
..+..+. .+ ...+.. +. |+|+ |+.+++++..++ .|+.||+.+ +. ...+. |...+.+
T Consensus 345 ~~~~~l~--------~~----~~~v~~~~~-~spd---g~~l~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~-~~~~~~~ 405 (706)
T 2z3z_A 345 RLIRQVT--------KG----EWEVTNFAG-FDPK---GTRLYFESTEASPLERHFYCIDIKG-GK-TKDLT-PESGMHR 405 (706)
T ss_dssp CEEEECC--------CS----SSCEEEEEE-ECTT---SSEEEEEESSSCTTCBEEEEEETTC-CC-CEESC-CSSSEEE
T ss_pred CEEEecC--------CC----CeEEEeeeE-EcCC---CCEEEEEecCCCCceEEEEEEEcCC-CC-ceecc-CCCceEE
Confidence 6666665 33 223444 55 9998 553555565555 667777765 43 34444 6778999
Q ss_pred EEEeCCCCeEEEecCC----CcEEEEecCCCe
Q 021291 258 LSIDESCNGGISGGAD----QKIVLYNLDHST 285 (314)
Q Consensus 258 ~~~~~~~~~l~s~s~d----g~i~iw~~~~~~ 285 (314)
++|+|+|++|+..+.+ +.|++||+++++
T Consensus 406 ~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 406 TQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 9999999988766443 569999998876
No 153
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=4.2e-17 Score=134.49 Aligned_cols=274 Identities=9% Similarity=-0.030 Sum_probs=164.2
Q ss_pred CCCceEEecCCCCceeEEEEccCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeccCC----cccEEEEEEcc
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGP 72 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~ 72 (314)
.++.+..+..+..+ .++|+|||++|+++. .++.|.+||..+.+.+..+..... ......++++|
T Consensus 40 t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp 117 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT 117 (361)
T ss_dssp TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT
T ss_pred CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC
Confidence 34566677766655 899999999998875 367899999999998888764311 12356899999
Q ss_pred cCCCCeEEEeec--CCeEEEEeCCCCCCCCCCeee-eecceeeEEEeeeeeccccccccCCCCcceeeccC-Ccee-e--
Q 021291 73 SIGLNKVISQGR--DGTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETV-D-- 145 (314)
Q Consensus 73 ~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-- 145 (314)
++++|+++.. +++|.+||+.+++.+. . +.........+.+............+....+.+.. ++.. .
T Consensus 118 --dg~~l~v~n~~~~~~v~v~d~~~~~~~~----~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~ 191 (361)
T 2oiz_A 118 --DGKFIVLQNASPATSIGIVDVAKGDYVE----DVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR 191 (361)
T ss_dssp --TSSEEEEEEESSSEEEEEEETTTTEEEE----EEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE
T ss_pred --CCCEEEEECCCCCCeEEEEECCCCcEEE----EEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc
Confidence 9999998874 5899999999886432 2 22211111111111111111122223333333332 2211 0
Q ss_pred --ecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCcee--eeecccccCCCCCcCCCCCceeeeEEEecCCCC
Q 021291 146 --TDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (314)
Q Consensus 146 --~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~ 218 (314)
..+..... +.+++++..++++ +.++.|.++|+...... ..+..... ...+..........+. |+|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~p~g~~~~a-~~~d-- 264 (361)
T 2oiz_A 192 SKQMFSVKDDPIFIAPALDKDKAHFV--SYYGNVYSADFSGDEVKVDGPWSLLND--EDKAKNWVPGGYNLVG-LHRA-- 264 (361)
T ss_dssp CCCCSCTTTSCBCSCCEECSSEEEEE--BTTSEEEEEECSSSSCEEEEEEESCCH--HHHHTTCEECCSSCEE-EETT--
T ss_pred ccceEcCCCCceEEEecccCCEEEEE--eCCCeEEEEEecCCCceecccccccCc--cccccccccCCeeEEE-EecC--
Confidence 11111111 5567777666543 34789999998754321 12110000 0000000000111244 8987
Q ss_pred CCceEEEEee----------cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCC--ee
Q 021291 219 QGFVNVLAGY----------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--TY 286 (314)
Q Consensus 219 ~g~~~l~~g~----------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~--~~ 286 (314)
+..++++.. ..+.|.+||+.+ .+.+..+..+. +.+++|+|+|++|++++. +.|.+||.+++ +.
T Consensus 265 -g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 265 -SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKL 339 (361)
T ss_dssp -TTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEE
T ss_pred -CCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCccee
Confidence 442334333 134899999998 88899998876 899999999999998887 99999999999 87
Q ss_pred eEee-------eeeeecCCCc
Q 021291 287 VLFG-------IGFVCDQEGN 300 (314)
Q Consensus 287 ~~~~-------~~~~~~~~~~ 300 (314)
+..+ .++.++|+|.
T Consensus 340 ~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 340 LRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEETTSCSSEEEEEECCCSC
T ss_pred eEEeccCCCCcEEEEecCCCC
Confidence 7653 3355666653
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=8.4e-18 Score=157.08 Aligned_cols=256 Identities=11% Similarity=0.068 Sum_probs=174.0
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCC-CeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
....+.+|...+.++.|+++ .++++++.|+.++||.+.. +.....+..+. .+...+|+| +++.|+.+. ++.|
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~---~~~~~~~Sp--DG~~la~~~-~~~i 267 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT---DYYPRHLNT--DGRRILFSK-GGSI 267 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC---SSCEEEEEE--SSSCEEEEE-TTEE
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC---CcceeeEcC--CCCEEEEEe-CCEE
Confidence 34566899999999999988 6778888899999998653 34444555453 256779999 999888874 8999
Q ss_pred EEEeCCCCCCCCCCeeeeec-------------ceeeEEEee-eeeccccccccCCCCcceeeccCCceeeecCCCCCC-
Q 021291 89 KCWDIENGGLSSNPSLTIKT-------------NSYHFCKLS-LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK- 153 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (314)
.+||+....+ ..+.. .......++ +.+....... .....+++........ +..+..
T Consensus 268 ~~~d~~~~~l-----~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~--~~~~~~~ 338 (1045)
T 1k32_A 268 YIFNPDTEKI-----EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLK--VPEPLRI 338 (1045)
T ss_dssp EEECTTTCCE-----EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEE--CSCCSCE
T ss_pred EEecCCceEe-----eeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEE--ccCCCcc
Confidence 9999944322 12221 123344455 4443332222 2333444444433222 223322
Q ss_pred ----ceeccCCCceEEEeecCcCeEE-EEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee
Q 021291 154 ----DDVPAEGPKYMAVAGEQLSEVE-IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 228 (314)
Q Consensus 154 ----~~~~~~~~~~~~~~g~~d~~i~-vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~ 228 (314)
++|+ +|+.++. ++. +..+. +||+.+++.. .+. +| ...+..+. |+|+ |+ +|++++
T Consensus 339 ~~~~~~~s-dg~~l~~-~s~-~~~l~~~~d~~~~~~~-~l~--------~~----~~~~~~~~-~SpD---G~-~la~~~ 397 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIH-GTR-EGDFLGIYDYRTGKAE-KFE--------EN----LGNVFAMG-VDRN---GK-FAVVAN 397 (1045)
T ss_dssp EEEEECSS-SEEEEEE-EET-TEEEEEEEETTTCCEE-ECC--------CC----CCSEEEEE-ECTT---SS-EEEEEE
T ss_pred eEEeeeEc-CCCeEEE-EEC-CCceEEEEECCCCCce-Eec--------CC----ccceeeeE-ECCC---CC-EEEEEC
Confidence 7899 8876654 333 67888 9998876543 232 23 34567777 9998 55 899999
Q ss_pred cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCC----------cEEEEecCCCeeeEe------eee
Q 021291 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ----------KIVLYNLDHSTYVLF------GIG 292 (314)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg----------~i~iw~~~~~~~~~~------~~~ 292 (314)
.++.|++||+.+ ++....+.+|...+.+++|+|+|++|++++.++ .|++||+.+++.... ...
T Consensus 398 ~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~ 476 (1045)
T 1k32_A 398 DRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA 476 (1045)
T ss_dssp TTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEE
T ss_pred CCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCC
Confidence 999999999997 777777778999999999999999998887654 899999998873321 233
Q ss_pred eeecCCCceec
Q 021291 293 FVCDQEGNKFG 303 (314)
Q Consensus 293 ~~~~~~~~~~~ 303 (314)
..++|+|..+.
T Consensus 477 ~~~spdG~~l~ 487 (1045)
T 1k32_A 477 PAFDADSKNLY 487 (1045)
T ss_dssp EEECTTSCEEE
T ss_pred ceEcCCCCEEE
Confidence 45778887554
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=3.1e-17 Score=133.86 Aligned_cols=211 Identities=11% Similarity=0.096 Sum_probs=142.0
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEeCCCCCCCCCCeeeeecc
Q 021291 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (314)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 109 (314)
++|++++.++.|++||..+++.+..+........+..++|+| +++.+ +++..++.|.+||+.+++... .+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~----~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLG----RIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEE----EEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCeEe----eEEcC
Confidence 478999999999999999999888876443100378999999 88765 456668899999998876432 11111
Q ss_pred eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec----------CcCeEEEEec
Q 021291 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE----------QLSEVEIWDL 179 (314)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----------~d~~i~vwd~ 179 (314)
......-.+ ..++|+|+|+.++++... .++.|.+||+
T Consensus 76 ~~~~~~~~~---------------------------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~ 122 (337)
T 1pby_B 76 TPEERVKSL---------------------------------FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122 (337)
T ss_dssp BTTEEEECT---------------------------------TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEET
T ss_pred Ccccccccc---------------------------------cceEECCCCCEEEEEecccccccccccccCceEEEEEC
Confidence 000000000 016799999877654311 3689999999
Q ss_pred CCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec---------
Q 021291 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV--------- 250 (314)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--------- 250 (314)
.+++....+.. ...+..+. |+|+ |+ +++++ ++.|++||+.+ ++.+..+..
T Consensus 123 ~~~~~~~~~~~-------------~~~~~~~~-~s~d---g~-~l~~~--~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~ 181 (337)
T 1pby_B 123 ETLSRRKAFEA-------------PRQITMLA-WARD---GS-KLYGL--GRDLHVMDPEA-GTLVEDKPIQSWEAETYA 181 (337)
T ss_dssp TTTEEEEEEEC-------------CSSCCCEE-ECTT---SS-CEEEE--SSSEEEEETTT-TEEEEEECSTTTTTTTBC
T ss_pred CCCcEEEEEeC-------------CCCcceeE-ECCC---CC-EEEEe--CCeEEEEECCC-CcEeeeeeccccCCCcee
Confidence 99887776652 11345565 9998 54 55555 67899999876 443332221
Q ss_pred ---------------------------------------------------------CCcceEEEEEeCCCCeEEEecCC
Q 021291 251 ---------------------------------------------------------HLEPVLCLSIDESCNGGISGGAD 273 (314)
Q Consensus 251 ---------------------------------------------------------h~~~v~~~~~~~~~~~l~s~s~d 273 (314)
+...+.+++|+|++++|+++ +
T Consensus 182 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~ 259 (337)
T 1pby_B 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--Y 259 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--E
T ss_pred CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--C
Confidence 12245568999999998888 7
Q ss_pred CcEEEEecCCCeeeEe------eeeeeecCCCceec
Q 021291 274 QKIVLYNLDHSTYVLF------GIGFVCDQEGNKFG 303 (314)
Q Consensus 274 g~i~iw~~~~~~~~~~------~~~~~~~~~~~~~~ 303 (314)
+.|++||+.+++.+.. ..+++++++|..+.
T Consensus 260 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 260 NVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVW 295 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEE
T ss_pred CeEEEEECCCCcCcceecCCCceeeEEECCCCCEEE
Confidence 8999999999877654 23456778876544
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.8e-17 Score=138.12 Aligned_cols=218 Identities=11% Similarity=0.027 Sum_probs=146.1
Q ss_pred CCCCCceEEecCCCCceeE-----EEEccCCCEEEEecC-CC--eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCC
Q 021291 5 PPPPDPVAVLRGHRASVTD-----VCFHQTKPILFAGTT-GG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (314)
Q Consensus 5 ~~~~~~~~~l~~h~~~v~~-----~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 76 (314)
+..+..+..+..|...... .+|+|||++|+.++. +| .|.+||+.+++.......+.. .+..+.|+| ++
T Consensus 17 ~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~sp--dg 92 (388)
T 3pe7_A 17 ASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD--NTFGGFLSP--DD 92 (388)
T ss_dssp TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB--CSSSCEECT--TS
T ss_pred CCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC--CccceEEcC--CC
Confidence 4556788888888877766 899999999988877 67 488899998887766655543 255778999 99
Q ss_pred CeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCcee
Q 021291 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV 156 (314)
Q Consensus 77 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (314)
+.|+.++.++.|++||+.+++... +............ ..+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~--~~~~~~~~~~~~~--------------------------------------~~~ 132 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENV--VYQVPAEWVGYGT--------------------------------------WVA 132 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEE--------------------------------------EEE
T ss_pred CEEEEEeCCCeEEEEECCCCccee--eeechhhcccccc--------------------------------------eeE
Confidence 999999999999999999886422 2222221111110 113
Q ss_pred ccCCCceEEE--------------------eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecC-
Q 021291 157 PAEGPKYMAV--------------------AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP- 215 (314)
Q Consensus 157 ~~~~~~~~~~--------------------~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p- 215 (314)
++++..++.. ....+..|.+||+.+++...... + ...+..+. |+|
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---------~----~~~~~~~~-~sp~ 198 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ---------E----NQWLGHPI-YRPY 198 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE---------E----SSCEEEEE-EETT
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec---------C----CccccccE-ECCC
Confidence 4555443321 12234789999999887544333 1 22456676 999
Q ss_pred CCCCCceEEEEeec------CCcEEEEEccCCCCceEeeecCC--cceEEEEEeCCCCeEEEecCC-C----cEEEEecC
Q 021291 216 SKSQGFVNVLAGYE------DGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGAD-Q----KIVLYNLD 282 (314)
Q Consensus 216 ~~~~g~~~l~~g~~------dg~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~d-g----~i~iw~~~ 282 (314)
+ |+ .|+.... ...|.++|... + ....+..+. ..+..++|+|+|+.|+..+.+ + .|++||++
T Consensus 199 d---g~-~l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 199 D---DS-TVAFCHEGPHDLVDARMWLINEDG-T-NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE 272 (388)
T ss_dssp E---EE-EEEEEECSCTTTSSCSEEEEETTS-C-CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred C---CC-EEEEEEecCCCCCcceEEEEeCCC-C-ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence 7 55 5555544 33788888764 3 334444444 358889999999987654432 2 39999999
Q ss_pred CCee
Q 021291 283 HSTY 286 (314)
Q Consensus 283 ~~~~ 286 (314)
+++.
T Consensus 273 ~g~~ 276 (388)
T 3pe7_A 273 TLEN 276 (388)
T ss_dssp TCCE
T ss_pred CCce
Confidence 8874
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=8.9e-18 Score=156.91 Aligned_cols=240 Identities=9% Similarity=0.001 Sum_probs=160.3
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccC---------CcccEEEEEEc-ccCCCCe
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS---------AAHGIVSVATG-PSIGLNK 78 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~-~~~~~~~ 78 (314)
...+.+.+|. .+...+|+|||++|+.+ .++.|.+||+... .+..+..+. +...+.+++|+ | +++.
T Consensus 236 ~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p--dG~~ 310 (1045)
T 1k32_A 236 KDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPL--DGDL 310 (1045)
T ss_dssp CSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEEC--GGGC
T ss_pred CcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCC--CCCE
Confidence 3455666665 46788999999988887 5899999998544 343554421 11248999999 9 9999
Q ss_pred EEEeecCCeEEEEeCCCCCCCCCCeeeeecc-eeeEEEeeeeeccccccccCCCCcc-eeeccCCceeeecCCCCCC---
Q 021291 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKD-CYEREVGETVDTDSLCDSK--- 153 (314)
Q Consensus 79 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 153 (314)
|++++ ++.|.+|++.+++... +..... ......++ .+........ ..... +++....... .+.++..
T Consensus 311 la~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~--~l~~~~~~~~ 382 (1045)
T 1k32_A 311 IAFVS-RGQAFIQDVSGTYVLK---VPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAE--KFEENLGNVF 382 (1045)
T ss_dssp EEEEE-TTEEEEECTTSSBEEE---CSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEE--ECCCCCCSEE
T ss_pred EEEEE-cCEEEEEcCCCCceEE---ccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCce--EecCCcccee
Confidence 99888 7899999998765321 111111 22222233 2211111111 11222 3344433322 2224433
Q ss_pred -ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC--
Q 021291 154 -DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-- 230 (314)
Q Consensus 154 -~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-- 230 (314)
++|+|+|+.++ .++.++.|++||+.+++....+. +| ...+..+. |+|| |+ +|++++.+
T Consensus 383 ~~~~SpDG~~la--~~~~~~~v~~~d~~tg~~~~~~~--------~~----~~~v~~~~-~SpD---G~-~la~~~~~~~ 443 (1045)
T 1k32_A 383 AMGVDRNGKFAV--VANDRFEIMTVDLETGKPTVIER--------SR----EAMITDFT-ISDN---SR-FIAYGFPLKH 443 (1045)
T ss_dssp EEEECTTSSEEE--EEETTSEEEEEETTTCCEEEEEE--------CS----SSCCCCEE-ECTT---SC-EEEEEEEECS
T ss_pred eeEECCCCCEEE--EECCCCeEEEEECCCCceEEecc--------CC----CCCccceE-ECCC---CC-eEEEEecCcc
Confidence 89999998665 34557999999999988776665 44 33456666 9998 65 67766654
Q ss_pred --------CcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 231 --------GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 231 --------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+.|++||+.+ ++ +..+..|...+..++|+|+|++|+.++.++...+|+..
T Consensus 444 ~~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEG-RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp STTCSCCEEEEEEEETTT-TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred ccccCCCCCeEEEEECCC-Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 3899999987 55 67778888899999999999999999998888888754
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=156.37 Aligned_cols=203 Identities=8% Similarity=-0.032 Sum_probs=138.1
Q ss_pred eEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCC-cccEEEEEEcccCCCCeEEEeec---------CCeEEEE
Q 021291 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKVISQGR---------DGTVKCW 91 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~---------dg~v~iw 91 (314)
..++|+|+|++++++ .|+.|++||+.+++....+..+.. ...+.+++|+| ||++|++++. ++.|++|
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEE
Confidence 378999999666554 699999999999988777765531 01288999999 9999998876 7899999
Q ss_pred eCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCc
Q 021291 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (314)
|+.+++.... ..+... . ..++|||||+.++. +. |
T Consensus 96 d~~~g~~~~~--~~l~~~-~----------------------------------------~~~~~SPDG~~la~--~~-~ 129 (719)
T 1z68_A 96 DLSNGEFVRG--NELPRP-I----------------------------------------QYLCWSPVGSKLAY--VY-Q 129 (719)
T ss_dssp ETTTTEECCS--SCCCSS-B----------------------------------------CCEEECSSTTCEEE--EE-T
T ss_pred ECCCCccccc--eecCcc-c----------------------------------------ccceECCCCCEEEE--EE-C
Confidence 9998865210 011100 0 00569999987654 33 6
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCC-------------CceeeeEEEecCCCCCCceEEEEeecCC-------
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG-------------RGMCMAVQAYLPSKSQGFVNVLAGYEDG------- 231 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~-------------~~~~~~~~~~~p~~~~g~~~l~~g~~dg------- 231 (314)
+.|++||+.+++....... ++.... .....++. |+|| |+ .|+.++.|.
T Consensus 130 ~~i~~~~~~~g~~~~l~~~-------~~~~~v~~g~~~~v~~ee~~~~~~~~~-wSPD---G~-~la~~~~d~~~~~~~~ 197 (719)
T 1z68_A 130 NNIYLKQRPGDPPFQITFN-------GRENKIFNGIPDWVYEEEMLATKYALW-WSPN---GK-FLAYAEFNDTDIPVIA 197 (719)
T ss_dssp TEEEEESSTTSCCEECCCC-------CBTTTEEESSCCHHHHHHTTCSSCCEE-ECTT---SS-EEEEEEEECTTSCEEE
T ss_pred CeEEEEeCCCCCcEEEecC-------CCcCCeEcccccceeeeecccCcccEE-ECCC---CC-EEEEEEECCCCCceEE
Confidence 8999999988876433221 221100 01123666 9998 55 777776542
Q ss_pred ---------------------------cEEEEEccCCCCce--------EeeecCCcceEEEEEeCCCCeEEEecCC---
Q 021291 232 ---------------------------SILVWDIRNPGIPL--------TAMKVHLEPVLCLSIDESCNGGISGGAD--- 273 (314)
Q Consensus 232 ---------------------------~i~vwd~~~~~~~~--------~~~~~h~~~v~~~~~~~~~~~l~s~s~d--- 273 (314)
.|++||+.+ ++.. ..+.+|...+..++|+||++++++....
T Consensus 198 ~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 198 YSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp EEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred eeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 788999986 4432 1234688889999999998877774332
Q ss_pred -CcEEEEe----cCCCee
Q 021291 274 -QKIVLYN----LDHSTY 286 (314)
Q Consensus 274 -g~i~iw~----~~~~~~ 286 (314)
..|.+|| +.+++.
T Consensus 277 ~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEEEEEEECSSSSSEEC
T ss_pred eEEEEEEcccCCCCCCce
Confidence 2488899 766654
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=5.9e-17 Score=134.00 Aligned_cols=255 Identities=9% Similarity=0.021 Sum_probs=150.7
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCC-CCeEEEEEeccCCcccEEEEEEcccCCCCe--EEEee----------
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTV-QHRTVSSSWVHSAAHGIVSVATGPSIGLNK--VISQG---------- 83 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--l~s~~---------- 83 (314)
+...+..++|+|+|++|++++.+ .|.+|++. +++.......... ..+.+++|+| ++++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADT--NTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTS--CCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECC--CCCEEEEEEecCCcceeccce
Confidence 34568899999999999998888 99999997 7776543332111 1245689999 9884 45553
Q ss_pred ---cCCeEEEEeCCC-CCCCCCCeeee----ecceeeEEEeeeeeccccccccCCCCcceeecc-CCcee-eecC--CC-
Q 021291 84 ---RDGTVKCWDIEN-GGLSSNPSLTI----KTNSYHFCKLSLVKEPYANAKQANEPKDCYERE-VGETV-DTDS--LC- 150 (314)
Q Consensus 84 ---~dg~v~iwd~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~~- 150 (314)
.++++.+|++.. +++.. .... .........+++.+..............+|++. .++.. .... ..
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEK--NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEE--EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred eecCCceEEEEccCCCCcCcc--eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 689999999974 44321 1111 112334444555443322222223456667776 44322 1111 11
Q ss_pred CCC---ceeccCCCceEEEeecCcCeEEEEecC--CCceee---eecccccCCCCCcCCCC--CceeeeEEE-ecCCCCC
Q 021291 151 DSK---DDVPAEGPKYMAVAGEQLSEVEIWDLN--TAERCT---RLHQNSCGGSPNFSSKG--RGMCMAVQA-YLPSKSQ 219 (314)
Q Consensus 151 ~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~--~~~~~~---~~~~~~~~~~~~h~~~~--~~~~~~~~~-~~p~~~~ 219 (314)
... ++|+|+|+.+++ ++..++.|.+|++. +++... .+.... ....+|.... ...+..+ + |+|+
T Consensus 192 g~~p~~~~~spdg~~l~v-~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~i-~~~spd--- 265 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYA-LMEAGNRICEYVIDPATHMPVYTHHSFPLIP-PGIPDRDPETGKGLYRADV-CALTFS--- 265 (365)
T ss_dssp TCCEEEEEECTTSSEEEE-EETTTTEEEEEEECTTTCCEEEEEEEEESSC-TTCCCBCTTTSSBSEEEEE-EEECTT---
T ss_pred CCCCCEeEECCCCCEEEE-EECCCCeEEEEEEeCCCCcEEEccceEEcCC-CCcCCcccccccccccccE-EEECCC---
Confidence 122 899999987665 45557899999765 454321 121000 0000110000 0023444 5 8998
Q ss_pred CceEEEEeec-CC-----cEEEEEccCCCCceE---eeecCCcceEEEEEeC---CCCeEEEecCC-CcEEEEecCCC
Q 021291 220 GFVNVLAGYE-DG-----SILVWDIRNPGIPLT---AMKVHLEPVLCLSIDE---SCNGGISGGAD-QKIVLYNLDHS 284 (314)
Q Consensus 220 g~~~l~~g~~-dg-----~i~vwd~~~~~~~~~---~~~~h~~~v~~~~~~~---~~~~l~s~s~d-g~i~iw~~~~~ 284 (314)
|+ +|+++.. +. .|.+|++...++... ....+...+..++|+| +|++|++++.+ +.|.+|+++..
T Consensus 266 G~-~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 266 GK-YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SS-EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CC-EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 66 5555543 23 899999963255433 2333555677899999 89999888764 89999999876
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.4e-15 Score=125.45 Aligned_cols=252 Identities=10% Similarity=0.098 Sum_probs=148.0
Q ss_pred cCCCEEEEec----CCCeEEEEeC--CCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC----CeEEEEeCCC--
Q 021291 28 QTKPILFAGT----TGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD----GTVKCWDIEN-- 95 (314)
Q Consensus 28 ~~~~~l~s~~----~dg~v~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~-- 95 (314)
+...+++.|+ .++.|.+|++ .+++.......+. ..+..++|+| ++++|++++.+ +.|.+|++..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--ANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SCCCSEEECT--TSSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CCCceEEECC--CCCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 3344566664 4668999876 4454433222233 4478899999 99999998886 7999999875
Q ss_pred CCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec-----CCC-----------CCC-ceecc
Q 021291 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-----SLC-----------DSK-DDVPA 158 (314)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----------~~~-~~~~~ 158 (314)
++... +..........+.+.+............+...+|++.....+... ..+ |.. ++|+|
T Consensus 87 g~~~~--~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 87 GTLHL--LNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp TEEEE--EEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred CcEEE--eeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 33211 222222222233333322222222333455666776543221110 111 112 89999
Q ss_pred CCCceEEEeecCcCeEEEEecCCCce------e------eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAER------C------TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~------~------~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
+|+.+++ ++..++.|.+|++..... + ..... . .......+. |+|+ |+ ++++
T Consensus 165 dg~~l~~-~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-------~----~~~~~~~~~-~spd---g~-~l~v 227 (361)
T 3scy_A 165 DGKYLLA-DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-------A----PGSGPRHLI-FNSD---GK-FAYL 227 (361)
T ss_dssp TSSEEEE-EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-------C----TTCCEEEEE-ECTT---SS-EEEE
T ss_pred CCCEEEE-EeCCCCEEEEEEEcCCCCcccccceeecccccceec-------C----CCCCCeEEE-EcCC---CC-EEEE
Confidence 9987765 455578999998875431 1 11111 1 122345676 9998 65 5555
Q ss_pred ee-cCCcEEEEEccCCCCc--eEeee---cCCcceEEEEEeCCCCeEEEecC--CCcEEEEecC--CCe--eeEe-----
Q 021291 227 GY-EDGSILVWDIRNPGIP--LTAMK---VHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLD--HST--YVLF----- 289 (314)
Q Consensus 227 g~-~dg~i~vwd~~~~~~~--~~~~~---~h~~~v~~~~~~~~~~~l~s~s~--dg~i~iw~~~--~~~--~~~~----- 289 (314)
++ .++.|.+||+.+ +.. +..+. .+......++|+|+|++|+++.. ++.|.+|+++ +++ .+..
T Consensus 228 ~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~ 306 (361)
T 3scy_A 228 INEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGI 306 (361)
T ss_dssp EETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCC
Confidence 44 789999999985 533 22232 23345789999999998866554 5899999996 343 2221
Q ss_pred -eeeeeecCCCceec
Q 021291 290 -GIGFVCDQEGNKFG 303 (314)
Q Consensus 290 -~~~~~~~~~~~~~~ 303 (314)
...++++|+|..+.
T Consensus 307 ~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 307 HPRNFIITPNGKYLL 321 (361)
T ss_dssp CCCEEEECTTSCEEE
T ss_pred CCceEEECCCCCEEE
Confidence 24567888887543
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=5.1e-15 Score=120.60 Aligned_cols=246 Identities=11% Similarity=0.023 Sum_probs=159.6
Q ss_pred CCceeEEEEccCCCEEEEecCC------------------------CeEEEEeCCCCeEEEEEeccCCcccEEEEEEccc
Q 021291 18 RASVTDVCFHQTKPILFAGTTG------------------------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 73 (314)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+..+... .......++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~- 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN-LFYLPHGLSIDT- 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT-TCSSEEEEEECT-
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC-ccCCceEEEECC-
Confidence 4679999999999999988877 47999999888887665422 113488999999
Q ss_pred CCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC
Q 021291 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (314)
Q Consensus 74 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (314)
+++++++...++.|++||....... +..+........ .. ..+.....
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~---~~~~~~~~~~g~-----------------~~------------~~~~~P~~ 147 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGP---LLILGRSMQPGS-----------------DQ------------NHFCQPTD 147 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCC---SEEESBTTBCCC-----------------ST------------TCCSSEEE
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEE---EEEecccCCCCC-----------------Cc------------cccCCCcE
Confidence 9898888888999999998654211 111111000000 00 00000000
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcE
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (314)
++++|++..++++.+..++.|++|| .+++.+..+........ .. .........++ ++|++ +. ++++...++.|
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~-~~-~~~~~~p~gia-~d~~~--g~-l~v~d~~~~~I 220 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSS-PR-PGQFSVPHSLA-LVPHL--DQ-LCVADRENGRI 220 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSS-CC-TTEESCEEEEE-EETTT--TE-EEEEETTTTEE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCC-CC-CcccCCCcEEE-EECCC--CE-EEEEECCCCEE
Confidence 6788844445553322478999999 56776666642100000 00 00112366776 99872 33 77888889999
Q ss_pred EEEEccCCCCceEeee--cCCcceEEEEEeC------CCCeEEEecCCCcEEEEecCCCeeeEe----------eeeeee
Q 021291 234 LVWDIRNPGIPLTAMK--VHLEPVLCLSIDE------SCNGGISGGADQKIVLYNLDHSTYVLF----------GIGFVC 295 (314)
Q Consensus 234 ~vwd~~~~~~~~~~~~--~h~~~v~~~~~~~------~~~~l~s~s~dg~i~iw~~~~~~~~~~----------~~~~~~ 295 (314)
++||..+ ++.+..+. .+...+..++|+| ++..+++.+.+..|++|++.+++.+.. ..++++
T Consensus 221 ~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 221 QCFKTDT-KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp EEEETTT-CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE
T ss_pred EEEECCC-CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE
Confidence 9999986 77777774 4566788999998 444444445566899999998887665 346778
Q ss_pred cCCCceeceee
Q 021291 296 DQEGNKFGTTW 306 (314)
Q Consensus 296 ~~~~~~~~~~w 306 (314)
+++|.++.+.+
T Consensus 300 ~~dG~lyvad~ 310 (329)
T 3fvz_A 300 SEDGTVYIGDA 310 (329)
T ss_dssp CTTSEEEEEES
T ss_pred CCCCCEEEEEC
Confidence 89987777654
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=2.4e-16 Score=138.44 Aligned_cols=196 Identities=10% Similarity=-0.039 Sum_probs=128.3
Q ss_pred ccEEEEEEcccCCCCeEEEeec-CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccC-C--CCcceeec
Q 021291 63 HGIVSVATGPSIGLNKVISQGR-DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA-N--EPKDCYER 138 (314)
Q Consensus 63 ~~v~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 138 (314)
.+|.+++|+| ||+.|++++. ||+++||++.+++..+ +............+++. ........ + ....+|.+
T Consensus 22 ~~~~~~~~~~--DG~~la~~s~~~g~~~lw~~~~g~~~~--lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 22 VEKYSLQGVV--DGDKLLVVGFSEGSVNAYLYDGGETVK--LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp SCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETTEEEE--CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEE
T ss_pred cchheeecCC--CCCeEEEEEccCCceeEEEEcCCCcEe--eecccccccccccCCCC--eEEEEeccCCCCcceEEEEE
Confidence 3599999999 9999998887 9999999987664321 11111112222333322 11111111 1 12234434
Q ss_pred cC--CceeeecCC--CCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEec
Q 021291 139 EV--GETVDTDSL--CDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 214 (314)
Q Consensus 139 ~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 214 (314)
.. ......... ++...+|+|+++.+++++++.+ .+.+||+.+++...... .+ . .++. |+
T Consensus 96 ~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~--------~~-----~--~~~~-~s 158 (582)
T 3o4h_A 96 NTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELAR--------LP-----G--FGFV-SD 158 (582)
T ss_dssp ETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEE--------ES-----S--CEEE-EE
T ss_pred eccCCCccccccCCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeec--------CC-----C--ceEE-EC
Confidence 33 221111111 1112789999988777777654 45599999887654443 11 1 5665 99
Q ss_pred CCCCCCceEEEEeecC----CcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCC--cEEEEecCCCeee
Q 021291 215 PSKSQGFVNVLAGYED----GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLDHSTYV 287 (314)
Q Consensus 215 p~~~~g~~~l~~g~~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~i~iw~~~~~~~~ 287 (314)
|| |+ +|++++.+ +.|++||+.+ ++. ..+..|...+..++|+|||++|++++.++ .|++||+++++..
T Consensus 159 pD---G~-~la~~~~~~~~~~~i~~~d~~~-g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 159 IR---GD-LIAGLGFFGGGRVSLFTSNLSS-GGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EE---TT-EEEEEEEEETTEEEEEEEETTT-CCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CC---CC-EEEEEEEcCCCCeEEEEEcCCC-CCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 98 66 78877666 7899999986 544 46788889999999999999999888888 8999999988766
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=6e-16 Score=129.17 Aligned_cols=255 Identities=9% Similarity=-0.015 Sum_probs=146.8
Q ss_pred CCCCCceEEecCCCCc-----eeEEEEccCCCEEEEecC---CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCC
Q 021291 5 PPPPDPVAVLRGHRAS-----VTDVCFHQTKPILFAGTT---GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (314)
Q Consensus 5 ~~~~~~~~~l~~h~~~-----v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 76 (314)
+..++.+..+..+... +..++|+|||++|+.... +..|.+||+.+++.......+. .....+.|+| ++
T Consensus 17 ~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~sp--dg 92 (396)
T 3c5m_A 17 SDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKG--DNTFGGFIST--DE 92 (396)
T ss_dssp TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSC--BCTTTCEECT--TS
T ss_pred CCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCC--CccccceECC--CC
Confidence 4556677778766554 788999999999876643 3478999998887654433222 1133478999 99
Q ss_pred CeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeE---EEee------------eeeccccc----cc----cCCCCc
Q 021291 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF---CKLS------------LVKEPYAN----AK----QANEPK 133 (314)
Q Consensus 77 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~------------~~~~~~~~----~~----~~~~~~ 133 (314)
+.|+.++.++.|.+||+.+++... +.......... ..+. ....+... .. ......
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQV--IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEE--EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 999999999999999998876422 22222211000 0000 01111110 00 112233
Q ss_pred ceeeccCCceeeecCCCCCC---ceecc-CCCceEEEeecCc----CeEEEEecCCCceeeeecccccCCCCCcCCCCCc
Q 021291 134 DCYEREVGETVDTDSLCDSK---DDVPA-EGPKYMAVAGEQL----SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG 205 (314)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~g~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~ 205 (314)
..+++..+...... ..... +.|+| ++..+++++.... ..|.+||+..++. ..+. .+. ...
T Consensus 171 ~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--------~~~--~~~ 238 (396)
T 3c5m_A 171 IKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIK--------EHA--EGE 238 (396)
T ss_dssp EEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESS--------CCC--TTE
T ss_pred EEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEee--------ccC--CCc
Confidence 34454444322211 11111 78999 7766655443222 4688999876543 2222 110 122
Q ss_pred eeeeEEEecCCCCCCceEEEEeecC-----CcEEEEEccCCCCceEeeecCCcceEEEEEeC-CCCeEEEec--------
Q 021291 206 MCMAVQAYLPSKSQGFVNVLAGYED-----GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGG-------- 271 (314)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s-------- 271 (314)
.+..+. |+|+ |+ .|+.++.+ +.|++||+.+ ++... +..... .. +.|++ +|+++++++
T Consensus 239 ~~~~~~-~spd---g~-~l~~~~~~~~~~~~~l~~~d~~~-g~~~~-l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 239 SCTHEF-WIPD---GS-AMAYVSYFKGQTDRVIYKANPET-LENEE-VMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVA 309 (396)
T ss_dssp EEEEEE-ECTT---SS-CEEEEEEETTTCCEEEEEECTTT-CCEEE-EEECCS-EE-EEEECSSSSEEEEEECCC-----
T ss_pred cccceE-ECCC---CC-EEEEEecCCCCccceEEEEECCC-CCeEE-eeeCCC-CC-CCccCCCCceEEEecCCcceeec
Confidence 455666 9998 55 44444332 4499999986 54332 222222 23 88999 999887754
Q ss_pred --------CCCcEEEEecCCCee
Q 021291 272 --------ADQKIVLYNLDHSTY 286 (314)
Q Consensus 272 --------~dg~i~iw~~~~~~~ 286 (314)
.++.|++||+.+++.
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -----CCCCCCEEEEEETTTTBC
T ss_pred cccccccCCCCcEEEEecccCce
Confidence 347899999987764
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=5.2e-16 Score=139.97 Aligned_cols=249 Identities=8% Similarity=-0.028 Sum_probs=152.8
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCc-c--cEEEEEEcccCCCCeEEEeecC---------
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-H--GIVSVATGPSIGLNKVISQGRD--------- 85 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~--~v~~~~~~~~~~~~~l~s~~~d--------- 85 (314)
......++|+|||++|+++ ||.|++||+.++++...+..|... . ....++|+| |+++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--DGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--CCCEEEEEECCeeeEEEccc
Confidence 3456789999999999886 999999999999988777776532 1 124488999 99999998876
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCC--------------
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD-------------- 151 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 151 (314)
+.+.+||+.+++... + ...........+++++...+.. ......+++...+........++
T Consensus 92 ~~~~~~d~~~~~~~~--l-~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT--E-ERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEEETTTTEECC--S-SCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred eEEEEEECCCCcEEE--c-ccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 566799999987543 2 1222334455566655544333 22333344444433222222221
Q ss_pred -------CCceeccCCCceEEEeecC----------------------------------cCeEEEEecCC---Cc--ee
Q 021291 152 -------SKDDVPAEGPKYMAVAGEQ----------------------------------LSEVEIWDLNT---AE--RC 185 (314)
Q Consensus 152 -------~~~~~~~~~~~~~~~~g~~----------------------------------d~~i~vwd~~~---~~--~~ 185 (314)
..+.|||||+.++..+... +.+|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 1267999999776543110 11577888887 63 12
Q ss_pred eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee----cCCcEEEEEccCCCC------ceEee--ecCCc
Q 021291 186 TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY----EDGSILVWDIRNPGI------PLTAM--KVHLE 253 (314)
Q Consensus 186 ~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~----~dg~i~vwd~~~~~~------~~~~~--~~h~~ 253 (314)
..+..+ .........+..+. |+|| |+ .++... .+..|++||+.+ ++ .+..+ ..|..
T Consensus 247 ~~l~~~------~~~~~~~~~~~~~~-wspd---g~-~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~ 314 (740)
T 4a5s_A 247 IQITAP------ASMLIGDHYLCDVT-WATQ---ER-ISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTG 314 (740)
T ss_dssp EEECCC------HHHHTSCEEEEEEE-EEET---TE-EEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSS
T ss_pred EEecCC------ccCCCCCeEEEEEE-EeCC---Ce-EEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCc
Confidence 222210 00000244677887 9998 55 444432 234799999987 54 12222 45666
Q ss_pred ceE-----EEEEeCCCCeEE-EecC-CC--cEEEEecCCCeee
Q 021291 254 PVL-----CLSIDESCNGGI-SGGA-DQ--KIVLYNLDHSTYV 287 (314)
Q Consensus 254 ~v~-----~~~~~~~~~~l~-s~s~-dg--~i~iw~~~~~~~~ 287 (314)
.|. .+.|+|||+.|+ ..+. +| .|++||++.++..
T Consensus 315 ~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE
T ss_pred eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE
Confidence 554 789999999876 5553 44 5888888766543
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=4.3e-17 Score=146.70 Aligned_cols=234 Identities=7% Similarity=-0.039 Sum_probs=140.2
Q ss_pred CceEEecCCCC---ceeEEEEccCCCEEEEecC---------CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCC
Q 021291 9 DPVAVLRGHRA---SVTDVCFHQTKPILFAGTT---------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (314)
Q Consensus 9 ~~~~~l~~h~~---~v~~~~~~~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 76 (314)
++...+.+|.. .|.+++|||||++|++++. |+.|++||+.+++.+..... . ..+..++|+| ||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~--~~~~~~~~SP--DG 121 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-P--RPIQYLCWSP--VG 121 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-C--SSBCCEEECS--ST
T ss_pred cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-C--cccccceECC--CC
Confidence 44445554443 3899999999999998876 78999999998876211111 2 3488999999 99
Q ss_pred CeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC-CCCce
Q 021291 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSKDD 155 (314)
Q Consensus 77 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 155 (314)
+.|+.+. ++.|++||+.+++... + ........ .+. +.... ........ ...++
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~--l-~~~~~~~~--v~~------------g~~~~--------v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQ--I-TFNGRENK--IFN------------GIPDW--------VYEEEMLATKYALW 175 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEE--C-CCCCBTTT--EEE------------SSCCH--------HHHHHTTCSSCCEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEE--E-ecCCCcCC--eEc------------ccccc--------eeeeecccCcccEE
Confidence 9999886 7899999998876421 1 10000000 000 00000 00000000 01177
Q ss_pred eccCCCceEEEeecC--------------------------------cCeEEEEecCCCcee--eeecccccCCCCCcCC
Q 021291 156 VPAEGPKYMAVAGEQ--------------------------------LSEVEIWDLNTAERC--TRLHQNSCGGSPNFSS 201 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~--------------------------------d~~i~vwd~~~~~~~--~~~~~~~~~~~~~h~~ 201 (314)
|+|||+.++..+... +..|++||+.+++.. ..+..+. ...+|
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~--~~~~~-- 251 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA--MIASS-- 251 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH--HHHTS--
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc--cCCCC--
Confidence 999998776533221 117889999887653 1111000 00022
Q ss_pred CCCceeeeEEEecCCCCCCceEEEEeecC----CcEEEEE----ccCCCCceEee----ecCCcceE-----EEEEeCCC
Q 021291 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWD----IRNPGIPLTAM----KVHLEPVL-----CLSIDESC 264 (314)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----g~i~vwd----~~~~~~~~~~~----~~h~~~v~-----~~~~~~~~ 264 (314)
...+..+. |+|| ++ ++++.... ..|.+|| ..+ +++...+ .+|...+. .+.|+|+|
T Consensus 252 --~~~~~~~~-~SpD---~~-~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 252 --DYYFSWLT-WVTD---ER-VCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp --CEEEEEEE-ESSS---SE-EEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred --cceEEEeE-EeCC---Ce-EEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCCccEECCCC
Confidence 44677887 9998 54 56654322 2488899 765 5555444 46777776 88999999
Q ss_pred CeEEE--ecCCC--cEEEEecCCCe
Q 021291 265 NGGIS--GGADQ--KIVLYNLDHST 285 (314)
Q Consensus 265 ~~l~s--~s~dg--~i~iw~~~~~~ 285 (314)
+.|+. ...+| .|.+|++..++
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CeEEEEEEccCCceEEEEEECCCCc
Confidence 96543 44555 46677776654
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=2.8e-14 Score=113.77 Aligned_cols=238 Identities=8% Similarity=0.075 Sum_probs=146.2
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccC----CcccEEEEEEc-ccCCCCeEEEeec-CCeEE
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS----AAHGIVSVATG-PSIGLNKVISQGR-DGTVK 89 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~-~~~~~~~l~s~~~-dg~v~ 89 (314)
+|-..+.+++++++++++++...++.|.+||.+ ++.+..+.... ....+..+++. + ++.++++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~--~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRN--SGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETT--TTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcC--CCeEEEEcCCCCCEEE
Confidence 345678999999999988988899999999976 66666664211 11348899994 5 6566665543 88999
Q ss_pred EEeCCCCCCCCCCeeeeec---ceeeEEEeeeeeccccccc-cCCCCcceeeccCCceeeecCCCCCC----ceeccCCC
Q 021291 90 CWDIENGGLSSNPSLTIKT---NSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGP 161 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 161 (314)
+||. +++... .+.. .......+...+ ..... ........++.............+.. ++++++|+
T Consensus 104 ~~d~-~g~~~~----~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 104 IYNQ-YGQFVR----KFGATILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EECT-TSCEEE----EECTTTCSCEEEEEECTTS--CEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred EECC-CCcEEE----EecCccCCCceEEEEeCCC--CEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 9994 443321 1211 112222222221 11111 11222333332221111111112211 88999886
Q ss_pred ceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCC-cEEEEEccC
Q 021291 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SILVWDIRN 240 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg-~i~vwd~~~ 240 (314)
+++ +...++.|++||.. ++.+..+... ++ ...+..++ ++|+ |+ ++++...++ .|.+||..
T Consensus 177 -l~v-~~~~~~~i~~~~~~-g~~~~~~~~~------g~----~~~p~~i~-~d~~---G~-l~v~~~~~~~~i~~~~~~- 237 (286)
T 1q7f_A 177 -IFI-SDNRAHCVKVFNYE-GQYLRQIGGE------GI----TNYPIGVG-INSN---GE-ILIADNHNNFNLTIFTQD- 237 (286)
T ss_dssp -EEE-EEGGGTEEEEEETT-CCEEEEESCT------TT----SCSEEEEE-ECTT---CC-EEEEECSSSCEEEEECTT-
T ss_pred -EEE-EECCCCEEEEEcCC-CCEEEEEccC------Cc----cCCCcEEE-ECCC---CC-EEEEeCCCCEEEEEECCC-
Confidence 444 55557899999974 5555555410 11 23466776 9987 55 677776675 99999964
Q ss_pred CCCceEeeecCCc--ceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 241 PGIPLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 241 ~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
++.+..+..+.. .+.+++++++|+++++ +.|+.|++|++...
T Consensus 238 -g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 238 -GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred -CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 666777765543 4789999999987777 57999999998654
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=2e-15 Score=125.72 Aligned_cols=254 Identities=11% Similarity=-0.023 Sum_probs=150.4
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEE--EcccCCCCeEEEe----
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVA--TGPSIGLNKVISQ---- 82 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~l~s~---- 82 (314)
+..+...+|...+..++|+|||+.|+.++.++.|++||+.+++....+..+.. .+.... ++| ++.+++..
T Consensus 71 ~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~~~~~--dg~~l~~~~~~~ 146 (388)
T 3pe7_A 71 VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE--WVGYGTWVANS--DCTKLVGIEIRR 146 (388)
T ss_dssp EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECT--TSSEEEEEEEEG
T ss_pred ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh--cccccceeECC--CCCeeccccccC
Confidence 34444556666666789999999999999999999999999988777766653 254444 477 88887742
Q ss_pred ------------------ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeee-eeccccccccCC---CCcceeeccC
Q 021291 83 ------------------GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL-VKEPYANAKQAN---EPKDCYEREV 140 (314)
Q Consensus 83 ------------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~ 140 (314)
..+..|.+||+.+++... + ...........+++ .+.......... ....++.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~--l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV--I-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE--E-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceEE--e-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC
Confidence 245789999999886422 2 22222234445555 443333322221 1234444432
Q ss_pred C-ceeeecCCCCC-C----ceeccCCCceEEEeecCcC---eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEE
Q 021291 141 G-ETVDTDSLCDS-K----DDVPAEGPKYMAVAGEQLS---EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (314)
Q Consensus 141 ~-~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 211 (314)
. ........... . .+|+|+|+.++.++...++ .|++||+.+++........ ++.. .........
T Consensus 224 ~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------~~~~-~~~~~~~~~ 296 (388)
T 3pe7_A 224 DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMP------ACSH-LMSNYDGSL 296 (388)
T ss_dssp TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEEC------CEEE-EEECTTSSE
T ss_pred CCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCC------Ccee-eeecCCCCe
Confidence 2 11222222221 1 6899999987654443222 3999999988743222210 1100 000011123
Q ss_pred EecCCCCCCceEEEEe---------ecCCcEEEEEccCCCCceEeeecCCc-----------ceEEEEEeCCCCeEEEec
Q 021291 212 AYLPSKSQGFVNVLAG---------YEDGSILVWDIRNPGIPLTAMKVHLE-----------PVLCLSIDESCNGGISGG 271 (314)
Q Consensus 212 ~~~p~~~~g~~~l~~g---------~~dg~i~vwd~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~l~s~s 271 (314)
|+|+ |+ .|+.. ..+..|++||+.+ ++ +..+..|.. .+..++|+|+|+.|+..+
T Consensus 297 -~spd---g~-~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 297 -MVGD---GS-DAPVDVQDDSGYKIENDPFLYVFNMKN-GT-QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp -EEEE---EC-CC------------CCCCEEEEEETTT-TE-EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred -EccC---CC-cceeEeeeccccccCCCCEEEEEeccC-Cc-eEEeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 8998 44 34432 4567899999986 44 455666655 578899999998876555
Q ss_pred -CCCcEEEEecCC
Q 021291 272 -ADQKIVLYNLDH 283 (314)
Q Consensus 272 -~dg~i~iw~~~~ 283 (314)
.+|...+|.++-
T Consensus 370 ~~~g~~~l~~~~l 382 (388)
T 3pe7_A 370 DVHGKPALYLATL 382 (388)
T ss_dssp CTTSSCEEEEEEC
T ss_pred cCCCceeEEEEEC
Confidence 577777776543
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=1.6e-14 Score=115.85 Aligned_cols=245 Identities=9% Similarity=-0.032 Sum_probs=154.7
Q ss_pred CCCceEEecCCCCceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
++..+..+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+. ..+.++++++ +++++++...+
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~l~~~~--dg~l~v~~~~~ 89 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPS--HHQNGHCLNK--QGHLIACSHGL 89 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSC--SSEEEEEECT--TCCEEEEETTT
T ss_pred CCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCC--CCcceeeECC--CCcEEEEecCC
Confidence 4455677777788889999999998 7888899999999998876 55666555 4489999999 98887777777
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecce----eeEEEeeeeecccccc---c-----------cCCCCcceeeccCCceeeec
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNS----YHFCKLSLVKEPYANA---K-----------QANEPKDCYEREVGETVDTD 147 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~ 147 (314)
+.|.+||..+++... ........ .....+...+...... . .......++.+.........
T Consensus 90 ~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (296)
T 3e5z_A 90 RRLERQREPGGEWES--IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAP 167 (296)
T ss_dssp TEEEEECSTTCCEEE--EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEE
T ss_pred CeEEEEcCCCCcEEE--EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEe
Confidence 899999998776421 11111110 1112222211111100 0 00112355555443222221
Q ss_pred CCCCCC---ceeccCCCceEEEeecCcCeEEEEecC-CCce---eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCC
Q 021291 148 SLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLN-TAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (314)
Q Consensus 148 ~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~-~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g 220 (314)
...... ++|+|+++.+ + +.+.++.|.+||+. +++. ...+. .+ ...+..++ ++++ |
T Consensus 168 ~~~~~~~~gi~~s~dg~~l-v-~~~~~~~i~~~~~~~~g~~~~~~~~~~--------~~----~~~p~~i~-~d~~---G 229 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLL-V-SDTGDNATHRYCLNARGETEYQGVHFT--------VE----PGKTDGLR-VDAG---G 229 (296)
T ss_dssp ECCCSSEEEEEECTTSCEE-E-EETTTTEEEEEEECSSSCEEEEEEEEC--------CS----SSCCCSEE-EBTT---S
T ss_pred ecCCCCCccEEECCCCCEE-E-EeCCCCeEEEEEECCCCcCcCCCeEee--------CC----CCCCCeEE-ECCC---C
Confidence 111111 8999999866 4 56667899999987 4443 22221 11 22344565 8887 6
Q ss_pred ceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEE-eCCCCeEEEecCCCcEEEEecCCC
Q 021291 221 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
+ +.++. ++.|.+||.. ++.+..+..+.. +++++| +++++.|+.++.++ +.-++..+.
T Consensus 230 ~-l~v~~--~~~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 230 L-IWASA--GDGVHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp C-EEEEE--TTEEEEECTT--SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred C-EEEEc--CCeEEEECCC--CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 5 44444 7899999986 677778887777 999999 58888888877664 444455444
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=2.9e-15 Score=122.73 Aligned_cols=214 Identities=9% Similarity=0.019 Sum_probs=134.3
Q ss_pred CCceEEecCCC-CceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCC----cccEEEEEEcccCCCCeEEE
Q 021291 8 PDPVAVLRGHR-ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSIGLNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~-~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s 81 (314)
++.++.+..+. ..+..++|+|+|+++ +++..++.|.+||+.+++.+..+..... ...+..++|+| ++++|++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~ 108 (349)
T 1jmx_B 31 DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYA 108 (349)
T ss_dssp TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT--TSSEEEE
T ss_pred CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC--CCCEEEE
Confidence 45566666443 257899999999865 5666789999999999988877764321 12378899999 9999998
Q ss_pred eecC------------CeEEEEeCCCCCCCCCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecC
Q 021291 82 QGRD------------GTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS 148 (314)
Q Consensus 82 ~~~d------------g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (314)
++.+ +.|.+||+.+++.... ...... .......+++.+. ....+....+++....+......
T Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~----l~~~~~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 109 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-VRTFPMPRQVYLMRAADDGS----LYVAGPDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-SEEEECCSSCCCEEECTTSC----EEEESSSEEEECTTTCCEEEEEC
T ss_pred EcccccccccccccCCCeEEEEECCCccccce-eeeccCCCcccceeECCCCc----EEEccCcEEEEeCCCCceecccc
Confidence 8865 8999999988543321 111111 1112222333222 11112223444443333221110
Q ss_pred CCC-------------------------------------------------------------------C-C---ceec
Q 021291 149 LCD-------------------------------------------------------------------S-K---DDVP 157 (314)
Q Consensus 149 ~~~-------------------------------------------------------------------~-~---~~~~ 157 (314)
.+. . . ++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 263 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 263 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec
Confidence 000 0 1 4567
Q ss_pred c-CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 158 A-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 158 ~-~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
| +++.+++ + ++.|.+||+.+++.+..+.. + ..+..+. |+|+ |+ +|++++.++.|++|
T Consensus 264 p~dg~~l~~-~---~~~v~~~d~~~~~~~~~~~~-------~------~~~~~~~-~s~d---g~-~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 264 PKDPNQIYG-V---LNRLAKYDLKQRKLIKAANL-------D------HTYYCVA-FDKK---GD-KLYLGGTFNDLAVF 321 (349)
T ss_dssp SSCTTEEEE-E---ESEEEEEETTTTEEEEEEEC-------S------SCCCEEE-ECSS---SS-CEEEESBSSEEEEE
T ss_pred CCCCCEEEE-E---cCeEEEEECccCeEEEEEcC-------C------CCccceE-ECCC---CC-EEEEecCCCeEEEE
Confidence 8 8876654 3 68999999999988777662 1 1345666 9998 44 56667888999999
Q ss_pred EccCCCCceEeeecC
Q 021291 237 DIRNPGIPLTAMKVH 251 (314)
Q Consensus 237 d~~~~~~~~~~~~~h 251 (314)
|..+ ++.+..+...
T Consensus 322 d~~~-~~~~~~~~~~ 335 (349)
T 1jmx_B 322 NPDT-LEKVKNIKLP 335 (349)
T ss_dssp ETTT-TEEEEEEECS
T ss_pred eccc-cceeeeeecC
Confidence 9987 7777666543
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=3.9e-13 Score=109.52 Aligned_cols=210 Identities=9% Similarity=0.064 Sum_probs=138.2
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC---
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--- 85 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--- 85 (314)
+....+.++...+.+++|+++|++++++..++.|.+||.++++.......+. ..+.+++++| +++++++...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~--dg~l~v~~~~~~~~ 110 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHK--DGRLFVCYLGDFKS 110 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--SSEEEEEECT--TSCEEEEECTTSSS
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC--CCcceEEECC--CCcEEEEeCCCCCC
Confidence 3455677777888999999999988889999999999998877665443444 4499999999 88877777666
Q ss_pred -CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 86 -GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 86 -g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
+.|.+||..++.... .+.......... . ++++|+|. ++
T Consensus 111 ~~~i~~~d~~~~~~~~--~~~~~~~~~~~~--~------------------------------------i~~d~~g~-l~ 149 (333)
T 2dg1_A 111 TGGIFAATENGDNLQD--IIEDLSTAYCID--D------------------------------------MVFDSKGG-FY 149 (333)
T ss_dssp CCEEEEECTTSCSCEE--EECSSSSCCCEE--E------------------------------------EEECTTSC-EE
T ss_pred CceEEEEeCCCCEEEE--EEccCccCCccc--c------------------------------------eEECCCCC-EE
Confidence 689999998765321 100000000000 0 45788885 34
Q ss_pred EEeecC------cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEc
Q 021291 165 AVAGEQ------LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (314)
Q Consensus 165 ~~~g~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (314)
+ +... .+.|..+|..+++...... . ......+. |+|+ |+.++++...++.|.+||.
T Consensus 150 v-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~----~~~~~~i~-~~~d---g~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 150 F-TDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---------N----ISVANGIA-LSTD---EKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp E-EECCCBTTBCCEEEEEECTTSCCEEEEEE---------E----ESSEEEEE-ECTT---SSEEEEEEGGGTEEEEEEE
T ss_pred E-EeccccccCCCceEEEEeCCCCEEEEeec---------C----CCcccceE-ECCC---CCEEEEEeCCCCeEEEEEe
Confidence 3 2321 2567777766544332222 1 11345666 9998 5534455566889999999
Q ss_pred cCCCCceEee--------ecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 239 RNPGIPLTAM--------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 239 ~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+..+..+..+ .++ ..+..++++++|+++++...++.|.+||.+
T Consensus 212 ~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 212 EDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp CTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred cCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 6423333221 122 467889999999988877778899999985
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=4.3e-14 Score=126.97 Aligned_cols=226 Identities=8% Similarity=0.040 Sum_probs=142.3
Q ss_pred CCCceeEEEEccCCCEEEEecCCC-----eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe----
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGG-----ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT---- 87 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~---- 87 (314)
|...+..++|||||++||.++.++ .|++||+.+++.+.....+ ..+..++|+| |++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~~~~~~~wsp--Dg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VKFSCMAWTH--DGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---ECSCCEEECT--TSSEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---cccceEEEEe--CCCEEEEEEECCccccc
Confidence 445688999999999998765533 8999999999877643222 1267899999 9999998887765
Q ss_pred ------------EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCce
Q 021291 88 ------------VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (314)
Q Consensus 88 ------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (314)
|++|++.++......++.......... . .+
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~--~------------------------------------~~ 239 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG--G------------------------------------AE 239 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE--E------------------------------------EE
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE--E------------------------------------EE
Confidence 999998876532100111110010000 0 56
Q ss_pred eccCCCceEEEeecC---cCeEEEEecCC------Cc-eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEE
Q 021291 156 VPAEGPKYMAVAGEQ---LSEVEIWDLNT------AE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 225 (314)
Q Consensus 156 ~~~~~~~~~~~~g~~---d~~i~vwd~~~------~~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~ 225 (314)
|+|+|+.+++.+... +..|++||+.+ +. ....+. .+.. .... . |+|+ |..+++
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~--------~~~~----~~~~-~-~s~d---g~~l~~ 302 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI--------DNFE----GEYD-Y-VTNE---GTVFTF 302 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE--------CSSS----SCEE-E-EEEE---TTEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee--------CCCC----cEEE-E-Eecc---CCEEEE
Confidence 999999877654321 56899999976 43 344444 2322 1111 2 7777 442444
Q ss_pred EeecC---CcEEEEEccCCCC-ceEeeecCCc--ceEEEEEeCCCCeEEEecCCCc--EEEEecCCCeeeEe-------e
Q 021291 226 AGYED---GSILVWDIRNPGI-PLTAMKVHLE--PVLCLSIDESCNGGISGGADQK--IVLYNLDHSTYVLF-------G 290 (314)
Q Consensus 226 ~g~~d---g~i~vwd~~~~~~-~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~--i~iw~~~~~~~~~~-------~ 290 (314)
.+..+ +.|.+||+.++.. ....+..|.. .+..++|++++.++++...|+. |.+|++.+++.+.. .
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v 382 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV 382 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE
T ss_pred EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE
Confidence 44333 4699999987321 2355555544 6888999988888888888885 56667756654332 2
Q ss_pred eeeeecCCCcee
Q 021291 291 IGFVCDQEGNKF 302 (314)
Q Consensus 291 ~~~~~~~~~~~~ 302 (314)
.+++.++++..+
T Consensus 383 ~~~~~s~d~~~l 394 (710)
T 2xdw_A 383 VGYSGQKKDTEI 394 (710)
T ss_dssp EEEECCTTCSEE
T ss_pred EEEecCCCCCEE
Confidence 345556666433
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=1e-13 Score=114.59 Aligned_cols=193 Identities=7% Similarity=0.025 Sum_probs=119.1
Q ss_pred EEEEecCC--CeEEEEeC--CCCeEEEEEecc-CCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCC-CCCCCCCCeee
Q 021291 32 ILFAGTTG--GELRIWDT--VQHRTVSSSWVH-SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE-NGGLSSNPSLT 105 (314)
Q Consensus 32 ~l~s~~~d--g~v~iwd~--~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~ 105 (314)
+|+.|+.. +.|.+|++ .+++....-... .....+..++|+| ++++|++++.+ .|.+||+. ++++.. ...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~~~~--~~~ 78 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTEIVH--EAS 78 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTEEEE--EEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCCEEE--eeE
Confidence 35556553 56887765 456543221110 1112478999999 99999999888 99999997 554211 000
Q ss_pred eecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec-------------CcC
Q 021291 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-------------QLS 172 (314)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~d~ 172 (314)
..... .+.. ++|+|+|+.++++++. .++
T Consensus 79 ~~~~g------~~~~---------------------------------~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 79 HPIGG------HPRA---------------------------------NDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp EECCS------SGGG---------------------------------GCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred eecCC------CCcc---------------------------------EEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 00000 0000 5689999864433332 578
Q ss_pred eEEEEecC-CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee-cCCcEEEEEcc-CCCCce--Ee
Q 021291 173 EVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIR-NPGIPL--TA 247 (314)
Q Consensus 173 ~i~vwd~~-~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~-~dg~i~vwd~~-~~~~~~--~~ 247 (314)
.+.+|++. +++....+... .+ .....+..+. |+|+ |+ +++++. .++.|++||+. + ++.. ..
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~------~~--~~~~~~~~~~-~spd---G~-~l~~~~~~~~~v~~~~~~~~-g~~~~~~~ 185 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNY------EY--QENTGIHGMV-FDPT---ET-YLYSADLTANKLWTHRKLAS-GEVELVGS 185 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEE------EC--CTTCCEEEEE-ECTT---SS-EEEEEETTTTEEEEEEECTT-SCEEEEEE
T ss_pred eEEEEccCCCCcCcceEeeE------Ee--CCCCcceEEE-ECCC---CC-EEEEEcCCCCEEEEEEECCC-CCEEEeee
Confidence 99999997 45544333210 01 0123566776 9998 65 555544 46899999998 5 4432 33
Q ss_pred ee--cCCcceEEEEEeCCCCeEEEecC-CCcEEEEecC
Q 021291 248 MK--VHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLD 282 (314)
Q Consensus 248 ~~--~h~~~v~~~~~~~~~~~l~s~s~-dg~i~iw~~~ 282 (314)
+. .|...+..++|+|+|++|++++. ++.|.+|+++
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 33 24567899999999998877664 7899999876
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=2e-13 Score=108.03 Aligned_cols=214 Identities=13% Similarity=0.095 Sum_probs=149.9
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeec
Q 021291 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (314)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 108 (314)
.+++|++++.|+.|.+||.++++.+..+..+.. ..+.++.+.| +|++|+ +.++.|..||. +++.++ .+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~~~W----~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATK--AGEILF--SYSKGAKMITR-DGRELW----NIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECT--TSCEEE--ECBSEEEEECT-TSCEEE----EEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECC--CCCEEE--eCCCCEEEECC-CCCEEE----EEcC
Confidence 467899999999999999989999999987642 2378999999 988888 44778999999 776544 3332
Q ss_pred ce-eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeee
Q 021291 109 NS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 187 (314)
Q Consensus 109 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~ 187 (314)
.. .... + ..+.++|+.+++.++ .++.|..+|. +++.+..
T Consensus 74 ~~~~~~~--~------------------------------------~~~~~dG~~lv~~~~-~~~~v~~vd~-~Gk~l~~ 113 (276)
T 3no2_A 74 PAGCEMQ--T------------------------------------ARILPDGNALVAWCG-HPSTILEVNM-KGEVLSK 113 (276)
T ss_dssp CTTCEEE--E------------------------------------EEECTTSCEEEEEES-TTEEEEEECT-TSCEEEE
T ss_pred CCCcccc--c------------------------------------cEECCCCCEEEEecC-CCCEEEEEeC-CCCEEEE
Confidence 10 0000 0 346788876554222 2577888886 6777766
Q ss_pred ecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeE
Q 021291 188 LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG 267 (314)
Q Consensus 188 ~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 267 (314)
+...... ...| .....+. +.++ |. ++++...++.|..||.. ++.+.++... ..+.++...+++..+
T Consensus 114 ~~~~~~~-~~~~-----~~~~~v~-~~~~---G~-~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 114 TEFETGI-ERPH-----AQFRQIN-KNKK---GN-YLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCL 179 (276)
T ss_dssp EEECCSC-SSGG-----GSCSCCE-ECTT---SC-EEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCEE
T ss_pred EeccCCC-Cccc-----ccccCce-ECCC---CC-EEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCEE
Confidence 6531100 0011 1122233 6666 55 88999999999999986 7888888764 455677888999999
Q ss_pred EEecCCCcEEEEecCCCeeeEeee-------------eeeecCCCceeceee
Q 021291 268 ISGGADQKIVLYNLDHSTYVLFGI-------------GFVCDQEGNKFGTTW 306 (314)
Q Consensus 268 ~s~s~dg~i~iw~~~~~~~~~~~~-------------~~~~~~~~~~~~~~w 306 (314)
++++.++.|..+|.++++.++... +....++|..+...|
T Consensus 180 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999888899999999999887642 233457788887775
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.6e-13 Score=111.72 Aligned_cols=219 Identities=12% Similarity=0.089 Sum_probs=141.4
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe-EEEEEec-------cCCcccEEEEEEcccCCCCeEEEee-cCC
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-TVSSSWV-------HSAAHGIVSVATGPSIGLNKVISQG-RDG 86 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~s~~-~dg 86 (314)
++-.....++++++|+++++...++.|++||..... .+..+.. .........|+++|. ++.++++.+ .++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNS 166 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCC
Confidence 344578899999999999999999999999976432 4555521 111134889999982 345566665 589
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
.|++||. +++... .+...... . ... .. .+.....++++|++..+++
T Consensus 167 ~I~~~~~-~g~~~~----~~~~~g~~----------~------~~~-------~~-----~~~~p~gia~d~~~g~l~v- 212 (329)
T 3fvz_A 167 RIVQFSP-SGKFVT----QWGEESSG----------S------SPR-------PG-----QFSVPHSLALVPHLDQLCV- 212 (329)
T ss_dssp EEEEECT-TSCEEE----EECEECCS----------S------SCC-------TT-----EESCEEEEEEETTTTEEEE-
T ss_pred eEEEEcC-CCCEEE----EeccCCCC----------C------CCC-------Cc-----ccCCCcEEEEECCCCEEEE-
Confidence 9999994 343211 11100000 0 000 00 0000000678898556665
Q ss_pred eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCC----CCceEEEEeecCCcEEEEEccCCC
Q 021291 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS----QGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 167 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~----~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
+...++.|++||..+++.+..+... .+ ...+..+. |+|. - +|. ..++...+..|++||..+ +
T Consensus 213 ~d~~~~~I~~~~~~~G~~~~~~~~~------~~----~~~~~~~~-~~pg-~~~~~~g~-~~v~~~~~~~v~~~~~~~-g 278 (329)
T 3fvz_A 213 ADRENGRIQCFKTDTKEFVREIKHA------SF----GRNVFAIS-YIPG-FLFAVNGK-PYFGDQEPVQGFVMNFSS-G 278 (329)
T ss_dssp EETTTTEEEEEETTTCCEEEEECCT------TT----TTCEEEEE-EETT-EEEEEECC-CCTTCSCCCCEEEEETTT-C
T ss_pred EECCCCEEEEEECCCCcEEEEEecc------cc----CCCcceee-ecCC-EEEEeCCC-EEeccCCCcEEEEEEcCC-C
Confidence 5566789999999988888777521 12 23456676 8871 0 021 222333456899999988 7
Q ss_pred CceEeee---cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 243 IPLTAMK---VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 243 ~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
+.+..+. ++...+..|+++++|.++++...++.|++|+++.
T Consensus 279 ~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 279 EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 7777773 5667899999999998889999999999999864
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=2.4e-14 Score=127.61 Aligned_cols=214 Identities=9% Similarity=-0.045 Sum_probs=137.2
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEe--cCCCeEEEEeCCCCeEEEEEeccCCcccEE---------EEEEc--ccCCCC
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAG--TTGGELRIWDTVQHRTVSSSWVHSAAHGIV---------SVATG--PSIGLN 77 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~ 77 (314)
...+.+|...|..++|++++-++++. +.++...||....+.....+..+... +. ...|+ | |++
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~SP--Dg~ 91 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWN--VRNRVFEYSGFPWAGVPRP--AGG 91 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCC--BCCCGGGTCCCCEEEECCS--SSS
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCcc--ccccccccCCccceeeeec--CCC
Confidence 44577899999999999887677777 66889999986544555556555432 44 55565 8 888
Q ss_pred e-EEEeec-CCeEEEEeCC--C-CCCCCCCeeeeecce---eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCC
Q 021291 78 K-VISQGR-DGTVKCWDIE--N-GGLSSNPSLTIKTNS---YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL 149 (314)
Q Consensus 78 ~-l~s~~~-dg~v~iwd~~--~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (314)
. |+.++. +..|.+|++. . ++.. .+.... .......
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~-----~l~~~~~~~~~~~~~~-------------------------------- 134 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPR-----PLTPVSAVGGGLRWAD-------------------------------- 134 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCE-----ECSCCCCSTTCEEEEE--------------------------------
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCE-----eccCCccCCCCccccC--------------------------------
Confidence 8 665543 5667777765 2 3311 111100 0000000
Q ss_pred CCCCceeccCCCceEEEeecC--------cCeEEEEecCC------CceeeeecccccCCCCCcCCCCCceeeeEEEecC
Q 021291 150 CDSKDDVPAEGPKYMAVAGEQ--------LSEVEIWDLNT------AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 215 (314)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~~--------d~~i~vwd~~~------~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p 215 (314)
++|+|||+.++.++... ...|++||+.+ ++....... + ...+..+. |+|
T Consensus 135 ----~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~-------~-----~~~~~~~~-~Sp 197 (662)
T 3azo_A 135 ----PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDD-------A-----HRFVTGPR-LSP 197 (662)
T ss_dssp ----EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCS-------C-----SSEECCCE-ECT
T ss_pred ----cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEec-------C-----CCcccCce-ECC
Confidence 56999998776543210 15899999987 554322201 1 23555666 999
Q ss_pred CCCCCceEEEEeecC--------CcEEEEEccCCC---CceEeeecCCcceEEEEEeCCCCeEEEecCCC--cEEEEecC
Q 021291 216 SKSQGFVNVLAGYED--------GSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLD 282 (314)
Q Consensus 216 ~~~~g~~~l~~g~~d--------g~i~vwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~i~iw~~~ 282 (314)
| |+ +|+.++.+ ..|++||+...+ +......+|...+..+.|+|+|+++++++.++ .|.+||++
T Consensus 198 D---G~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 198 D---GR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp T---SS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred C---CC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 8 65 67666544 379999998314 44444455678999999999999888888888 56666665
Q ss_pred CCee
Q 021291 283 HSTY 286 (314)
Q Consensus 283 ~~~~ 286 (314)
+++.
T Consensus 274 ~~~~ 277 (662)
T 3azo_A 274 TGAA 277 (662)
T ss_dssp TCCE
T ss_pred CCce
Confidence 5543
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.64 E-value=1.1e-12 Score=113.72 Aligned_cols=254 Identities=11% Similarity=0.012 Sum_probs=155.2
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCC--CCeEEEEEeccCCcccEEEEEEc----ccCCCCeEEE
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATG----PSIGLNKVIS 81 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~s 81 (314)
.+.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++|+ | +|+++++
T Consensus 187 ~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---~P~~ia~s~~~~p--DGk~l~v 260 (567)
T 1qks_A 187 YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---EARSIETSKMEGW--EDKYAIA 260 (567)
T ss_dssp CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---EEEEEEECCSTTC--TTTEEEE
T ss_pred CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---CCceeEEccccCC--CCCEEEE
Confidence 345555553 2356789999999999999999999999995 788888776543 25799999 7 8888887
Q ss_pred eec-CCeEEEEeCCCCCCCCCCeeeeecce-------------eeEEEeeeeeccccccccCCCCcceeeccCCceeee-
Q 021291 82 QGR-DGTVKCWDIENGGLSSNPSLTIKTNS-------------YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT- 146 (314)
Q Consensus 82 ~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (314)
++. +++|.++|..+.+.+. .+.... ......+.............+....++.........
T Consensus 261 ~n~~~~~v~ViD~~t~~~~~----~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 261 GAYWPPQYVIMDGETLEPKK----IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEETTEEEEEETTTCCEEE----EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred EEccCCeEEEEECCCCcEEE----EEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee
Confidence 665 6999999998876543 222111 011111111111111112223333334333221111
Q ss_pred cC--CCCCC-ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceE
Q 021291 147 DS--LCDSK-DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (314)
Q Consensus 147 ~~--~~~~~-~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~ 223 (314)
.. ..+.. ..|+|+++++++++. .++.|.++|+.+++.+..+... ....|.. .+. . - ++|+. +. +
T Consensus 337 ~i~~~~~~~d~~~~pdgr~~~va~~-~sn~V~ViD~~t~kl~~~i~vg---g~~Phpg--~g~--~-~-~~p~~--g~-v 403 (567)
T 1qks_A 337 EISAERFLHDGGLDGSHRYFITAAN-ARNKLVVIDTKEGKLVAIEDTG---GQTPHPG--RGA--N-F-VHPTF--GP-V 403 (567)
T ss_dssp EEECCSSEEEEEECTTSCEEEEEEG-GGTEEEEEETTTTEEEEEEECS---SSSBCCT--TCE--E-E-EETTT--EE-E
T ss_pred eeeccccccCceECCCCCEEEEEeC-CCCeEEEEECCCCcEEEEEecc---CcCCCCc--cce--e-e-ECCCC--Cc-E
Confidence 11 11111 789999998877544 4689999999999877666520 0012211 122 1 1 56751 33 4
Q ss_pred EEEee-cCCcEEEEEccCC------CCceEeeecCCcceEEEEEeCCCCeEEEecC-------CCcEEEEecCCC
Q 021291 224 VLAGY-EDGSILVWDIRNP------GIPLTAMKVHLEPVLCLSIDESCNGGISGGA-------DQKIVLYNLDHS 284 (314)
Q Consensus 224 l~~g~-~dg~i~vwd~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------dg~i~iw~~~~~ 284 (314)
.+++. .++.|.++|.... .+.++++......-..+..+|++++|..... .+.|.++|+.+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 55554 4689999998852 2456777654443345678999998877552 458999999877
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=9.7e-13 Score=107.00 Aligned_cols=254 Identities=6% Similarity=-0.130 Sum_probs=154.6
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCC
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 98 (314)
.....+++. +++++++...++.|.+||..+++.+.++... .....+++++ ++..+++...++.|.+||..+++.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~---~~p~~i~~~~--~g~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGF---TSPRYIHFLS--DEKAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECC---SSEEEEEEEE--TTEEEEEEBSCSEEEEEETTTTEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCC---CCCcEEEEeC--CCeEEEEECCCCeEEEEECCCCeE
Confidence 345677774 4556666667899999999999998888543 3478999998 875444444799999999998865
Q ss_pred CCCCeeeeec------ceeeEEEeeeeecccccccc-CCCCcceeeccCCceeeecCCCC-C-CceeccCCCceEEEeec
Q 021291 99 SSNPSLTIKT------NSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCD-S-KDDVPAEGPKYMAVAGE 169 (314)
Q Consensus 99 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~ 169 (314)
.. .+.... .+.. ..+ .......... ......+++....+.......+. . .++++|+|+ +++++..
T Consensus 118 ~~--~i~~g~~~~~~~~p~~-i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 118 TG--YIECPDMDMESGSTEQ-MVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDG 191 (328)
T ss_dssp EE--EEECTTCCTTTCBCCC-EEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCC
T ss_pred EE--EEEcCCccccCCCcce-EEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECC
Confidence 33 122111 1111 111 1111111111 23445556666555433322222 1 288999986 4443322
Q ss_pred C---------cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 170 Q---------LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 170 ~---------d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
. .+.|.++|..+++....+..+ .......++ |+|+ ++ .++++.. .|.+||..+
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-----------~g~~p~~la-~~~d---~~-~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-----------LGDWPSEVQ-LNGT---RD-TLYWINN--DIWRMPVEA 253 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECC-----------TTCCCEEEE-ECTT---SC-EEEEESS--SEEEEETTC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecC-----------CCCCceeEE-EecC---CC-EEEEEcc--EEEEEECCC
Confidence 1 278999999998877666521 012456676 9997 44 5555543 899999987
Q ss_pred CCCceE--eeecCCcceEEEEEeC-CCCeEEEe----cCCCcEEEEecCCCeeeEeeeeeeecCCCceecee
Q 021291 241 PGIPLT--AMKVHLEPVLCLSIDE-SCNGGISG----GADQKIVLYNLDHSTYVLFGIGFVCDQEGNKFGTT 305 (314)
Q Consensus 241 ~~~~~~--~~~~h~~~v~~~~~~~-~~~~l~s~----s~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (314)
++... .+.........++++| ++.++++. ..++.|.+||.+ ++.+..+. .-..|.+-.|-..
T Consensus 254 -~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~-~G~~P~~~~~~~~ 322 (328)
T 3dsm_A 254 -DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY-VGIIPGAFCWKLE 322 (328)
T ss_dssp -SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE-EEESEEEEEEECC
T ss_pred -CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE-eccCcceEEEecc
Confidence 44331 1222245788999998 56666666 678999999998 77666532 2333444444333
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=6.6e-13 Score=115.09 Aligned_cols=207 Identities=15% Similarity=0.007 Sum_probs=143.7
Q ss_pred cCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCC--CCCCCCCCeee
Q 021291 28 QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE--NGGLSSNPSLT 105 (314)
Q Consensus 28 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~ 105 (314)
+.+.++++...++.|.++|..+++.+..+.... .+..+.|+| |++++++++.|+.|.+||+. +.+.+ .+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~v----~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTV----AE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEE----EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEECC--CCCEEEEEcCCCeEEEEECCCCCCcEe----EE
Confidence 455677888889999999999999998887543 367999999 99999999999999999996 54332 22
Q ss_pred eecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceec----cCCCceEEEeecCcCeEEEEecCC
Q 021291 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP----AEGPKYMAVAGEQLSEVEIWDLNT 181 (314)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~d~~i~vwd~~~ 181 (314)
+........ ++|+ |+|+++++ +...+++|.++|..+
T Consensus 236 i~~G~~P~~---------------------------------------ia~s~~~~pDGk~l~v-~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 236 IKIGSEARS---------------------------------------IETSKMEGWEDKYAIA-GAYWPPQYVIMDGET 275 (567)
T ss_dssp EECCSEEEE---------------------------------------EEECCSTTCTTTEEEE-EEEETTEEEEEETTT
T ss_pred EecCCCCce---------------------------------------eEEccccCCCCCEEEE-EEccCCeEEEEECCC
Confidence 322211111 5688 69987766 455679999999999
Q ss_pred CceeeeecccccC-CC-CCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEE
Q 021291 182 AERCTRLHQNSCG-GS-PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 259 (314)
Q Consensus 182 ~~~~~~~~~~~~~-~~-~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 259 (314)
.+.+..+...... .. ..|. ...+..+. .+++ +..+++....+|.|.++|......+....-.......++.
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p---~~rva~i~-~s~~---~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHP---EPRVAAIL-ASHY---RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp CCEEEEEECCEECTTTCCEES---CCCEEEEE-ECSS---SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred CcEEEEEeccccccccccccC---CCceEEEE-EcCC---CCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCce
Confidence 9988776621000 00 0011 11345565 7776 3336777788899999998863222211122345677899
Q ss_pred EeCCCCeEEEec-CCCcEEEEecCCCeeeEee
Q 021291 260 IDESCNGGISGG-ADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 260 ~~~~~~~l~s~s-~dg~i~iw~~~~~~~~~~~ 290 (314)
|++++++|++++ .++.|.++|+.+++.+..+
T Consensus 349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 349 LDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 999999876554 6789999999999876543
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=4.1e-14 Score=126.17 Aligned_cols=216 Identities=9% Similarity=-0.002 Sum_probs=138.2
Q ss_pred CceEEecC-----CCCceeEEEEccCCCEEEEecCC----------CeEEEEeCCC------CeEEEEEe-ccCCcccEE
Q 021291 9 DPVAVLRG-----HRASVTDVCFHQTKPILFAGTTG----------GELRIWDTVQ------HRTVSSSW-VHSAAHGIV 66 (314)
Q Consensus 9 ~~~~~l~~-----h~~~v~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~~~v~ 66 (314)
...+.+.. |...+..++|+|||+.|++++.| ..|++||+.+ ++.. .+. .+. ..+.
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~--~~~~ 191 (662)
T 3azo_A 115 AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAH--RFVT 191 (662)
T ss_dssp CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCS--SEEC
T ss_pred CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCC--Cccc
Confidence 34455665 67789999999999999998877 5899999987 5543 343 333 4588
Q ss_pred EEEEcccCCCCeEEEeecCC--------eEEEEeCC-CCCCCCCCeeeeecc-eeeEEEeeeeeccccccccCCCCccee
Q 021291 67 SVATGPSIGLNKVISQGRDG--------TVKCWDIE-NGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCY 136 (314)
Q Consensus 67 ~~~~~~~~~~~~l~s~~~dg--------~v~iwd~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (314)
.++|+| ||++|+.++.++ .|.+||+. ++.... ...+... .... ..
T Consensus 192 ~~~~Sp--DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~--~~~l~~~~~~~~--~~------------------- 246 (662)
T 3azo_A 192 GPRLSP--DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD--TRTLLGGPEEAI--AQ------------------- 246 (662)
T ss_dssp CCEECT--TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE--EEEEEEETTBCE--EE-------------------
T ss_pred CceECC--CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc--cEEeCCCCCceE--cc-------------------
Confidence 899999 999999877553 79999998 452100 1111100 0000 00
Q ss_pred eccCCceeeecCCCCCCceeccCCCceEEEeecCcC--eEEEEecCCCceeeeecccccCCCCCcCCCCCc-----eeee
Q 021291 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG-----MCMA 209 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~-----~~~~ 209 (314)
.+|+|+|+ +++ ++..++ .|.+||+.+++...... .+.. ... .+..
T Consensus 247 -----------------~~~spdg~-l~~-~~~~~~~~~l~~~~~~~~~~~~l~~--------~~~~-~~~p~w~~~~~~ 298 (662)
T 3azo_A 247 -----------------AEWAPDGS-LIV-ATDRTGWWNLHRVDPATGAATQLCR--------REEE-FAGPLWTPGMRW 298 (662)
T ss_dssp -----------------EEECTTSC-EEE-EECTTSSCEEEEECTTTCCEEESSC--------CSSB-SSCCCCSTTCCS
T ss_pred -----------------eEECCCCe-EEE-EECCCCCeEEEEEECCCCceeeccc--------cccc-ccCccccccCce
Confidence 56999998 554 455567 67777776666443332 1111 100 0234
Q ss_pred EEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEE-EEeCCCCeEEEecCCCc--EEEEecCCCee
Q 021291 210 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-SIDESCNGGISGGADQK--IVLYNLDHSTY 286 (314)
Q Consensus 210 ~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~s~s~dg~--i~iw~~~~~~~ 286 (314)
+. |+|+ ++ +++++.. +.++||.++..+..+..+..|...+..+ +++++..++++++.+.. |.+||+.+++.
T Consensus 299 ~~-~~~~---~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 299 FA-PLAN---GL-IAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EE-ECTT---SC-EEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred Ee-EeCC---CE-EEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 55 8876 55 7888888 9999995543234477788888888888 77766655666666654 55556666654
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=3.7e-14 Score=127.04 Aligned_cols=249 Identities=10% Similarity=-0.012 Sum_probs=150.4
Q ss_pred CCCCceeEEEEccCCCEEE-----EecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe---
Q 021291 16 GHRASVTDVCFHQTKPILF-----AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT--- 87 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~--- 87 (314)
+|...+..++|||||++|| .|+.+..|++||+.+++.+. ..+........++|+| |++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp--Dg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP--DSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT--TSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec--CCCEEEEEEecCCCCC
Confidence 4666789999999999998 56667899999999987641 1111111126899999 9999999988776
Q ss_pred ----------EEEEeCCCCCCCCCCeeeeecc--eeeEEEeeeeeccccccccCC-CCcceeeccCCc-eeeecCCCCCC
Q 021291 88 ----------VKCWDIENGGLSSNPSLTIKTN--SYHFCKLSLVKEPYANAKQAN-EPKDCYEREVGE-TVDTDSLCDSK 153 (314)
Q Consensus 88 ----------v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 153 (314)
|++|++.++......++..... ......+++.+.......... ....++.+.... ...........
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 273 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA 273 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc
Confidence 9999999876322112222221 223344454443333333222 223344332211 11111111111
Q ss_pred ---ceeccCCCceEEEeec--CcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEE
Q 021291 154 ---DDVPAEGPKYMAVAGE--QLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (314)
Q Consensus 154 ---~~~~~~~~~~~~~~g~--~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (314)
..+ ++|. +++.+.. .++.|.+||+.+++. ...+. .+. ....+..+. |+ + +. ++++
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~--~~~~l~~~~-~~-~---~~-lv~~ 335 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV--------PED--SSASLLSVS-IV-G---GH-LSLE 335 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE--------CCC--SSCEEEEEE-EE-T---TE-EEEE
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe--------cCC--CCCeEEEEE-EE-C---CE-EEEE
Confidence 333 6777 6654331 258899999987653 23333 121 122455555 65 2 44 7888
Q ss_pred eecCCcEEEEEccCCCCceEeeecC-CcceEEEEEeCCCCeEE----EecCCCcEEEEecCCCee
Q 021291 227 GYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 227 g~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~----s~s~dg~i~iw~~~~~~~ 286 (314)
...|+..+||.++..+.....+..+ ...|..+++++++..|+ +....+.|++||+.+++.
T Consensus 336 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 336 YLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8999998888776325556666655 56778888899887776 444467899999988764
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=1.3e-12 Score=103.07 Aligned_cols=237 Identities=8% Similarity=-0.042 Sum_probs=139.7
Q ss_pred ceeEEEEccCCCEEE-EecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCC
Q 021291 20 SVTDVCFHQTKPILF-AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 98 (314)
...+++++++|++++ +.+.++.|.+||..+........... ..+.++++.+ +++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~~~--~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL--YQPQGLAVDG--AGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC--CSCCCEEECT--TCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc--CCcceeEECC--CCCEEEEcC-CCEEEEEeCCCceE
Confidence 678999999998777 55788999999976544322111221 3478999999 877666655 88999999876543
Q ss_pred CCCCeeeeec-ceeeEEEeeeeeccccccc-cCCCCcceeeccCCceeeecCCC--C-CCceeccCCCceEEEeecCcCe
Q 021291 99 SSNPSLTIKT-NSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLC--D-SKDDVPAEGPKYMAVAGEQLSE 173 (314)
Q Consensus 99 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~~d~~ 173 (314)
.. +.... .......+...+ ..... ........++............. . ..++++++|+ +++ +...++.
T Consensus 100 ~~---~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v-~~~~~~~ 172 (270)
T 1rwi_B 100 TV---LPFDGLNYPEGLAVDTQG--AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYV-TDTDNNR 172 (270)
T ss_dssp EE---CCCCSCSSEEEEEECTTC--CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEE-EEGGGTE
T ss_pred ee---eecCCcCCCcceEECCCC--CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEE-EECCCCE
Confidence 11 11111 111122222111 11111 11112222222211111111111 1 1288999886 544 4444689
Q ss_pred EEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCc
Q 021291 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE 253 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~ 253 (314)
|.+||........... .+ ......++ ++|+ |. ++++...++.|.+||... .........+..
T Consensus 173 i~~~~~~~~~~~~~~~--------~~----~~~p~~i~-~d~~---g~-l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~ 234 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPF--------TD----ITAPWGIA-VDEA---GT-VYVTEHNTNQVVKLLAGS-TTSTVLPFTGLN 234 (270)
T ss_dssp EEEECTTTCCEEECCC--------SS----CCSEEEEE-ECTT---CC-EEEEETTTSCEEEECTTC-SCCEECCCCSCS
T ss_pred EEEEecCCCceEeecc--------cC----CCCceEEE-ECCC---CC-EEEEECCCCcEEEEcCCC-CcceeeccCCCC
Confidence 9999988665433221 11 13466776 8887 54 677777788999999875 333222223345
Q ss_pred ceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.+.+++++++|+++++...++.|+++++...+.
T Consensus 235 ~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 235 TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 789999999999889999999999999887654
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=1.5e-12 Score=106.62 Aligned_cols=225 Identities=13% Similarity=0.036 Sum_probs=137.7
Q ss_pred CceeEEEEccCCCEEEEecCC---C--eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC--------
Q 021291 19 ASVTDVCFHQTKPILFAGTTG---G--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-------- 85 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-------- 85 (314)
..+..++|+|||++|+.++.+ + .|.+|++.+++.......+ . +..++|+| +++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~-~~~~~wsp--dg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK---N-IRSLEWNE--DSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES---E-EEEEEECT--TSSEEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC---C-ccceeECC--CCCEEEEEEccCCCcCCcE
Confidence 457889999999999887654 3 4888898888766554433 3 89999999 99988877642
Q ss_pred -------------------CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCC------C-Ccceeecc
Q 021291 86 -------------------GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN------E-PKDCYERE 139 (314)
Q Consensus 86 -------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~ 139 (314)
..|.+||+.+++... .+... ......+++.+ ........ . ...++.+.
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~--~l~~~--~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE--EFEKP--RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEE--EEEEE--TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEe--eecCC--CcccccCCCCe--EEEEEecccccccccccccEEEeC
Confidence 579999998876411 12221 22233344333 11111111 1 23444444
Q ss_pred CCceeeecCCCCCCceeccCCCceEEEeecC------cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeee-EEE
Q 021291 140 VGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ------LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA-VQA 212 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~-~~~ 212 (314)
...............++|+|+.+++.+... ...|.+|| +++...... ++ ...+.. +.
T Consensus 207 -~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~--------~~----~~~~~~~~~- 270 (347)
T 2gop_A 207 -DGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD--------EV----DRGVGQAKI- 270 (347)
T ss_dssp -TTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST--------TC----CSEEEEEEE-
T ss_pred -CCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc--------cC----CcccCCccE-
Confidence 222221111111144599998876544221 24788888 454332222 22 234554 55
Q ss_pred ecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcE-EEEecC
Q 021291 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI-VLYNLD 282 (314)
Q Consensus 213 ~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i-~iw~~~ 282 (314)
|+ + + ++++++.++.++|| +.+ ++. ..+..+...|.+++|++ .++++++.++.. .+|.++
T Consensus 271 ~s-d---g--~~~~~~~~~~~~l~-~~~-g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 271 KD-G---K--VYFTLFEEGSVNLY-IWD-GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ET-T---E--EEEEEEETTEEEEE-EES-SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred Ec-C---c--EEEEEecCCcEEEE-EcC-Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 87 5 4 78888899999999 884 655 34445577899999999 567777766654 778776
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=2.5e-12 Score=101.72 Aligned_cols=219 Identities=12% Similarity=0.009 Sum_probs=149.8
Q ss_pred CCCCceEEecCCC-CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 6 PPPDPVAVLRGHR-ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 6 ~~~~~~~~l~~h~-~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
..++.+..+..+. ..+.+++++|+|++|+ +.++.|..||. +++.+..+..+.. ..+.++.+.+ +++.+++.+.
T Consensus 23 ~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~-~~~~~~~~~~--dG~~lv~~~~ 96 (276)
T 3no2_A 23 DTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG-CEMQTARILP--DGNALVAWCG 96 (276)
T ss_dssp TTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT-CEEEEEEECT--TSCEEEEEES
T ss_pred CCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC-ccccccEECC--CCCEEEEecC
Confidence 3567888888776 5789999999999888 34778999998 8999999887532 3488999999 9999998887
Q ss_pred -CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCce
Q 021291 85 -DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (314)
Q Consensus 85 -dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (314)
++.|..+|. +++.++ .......... .......+++.++|+.+
T Consensus 97 ~~~~v~~vd~-~Gk~l~----~~~~~~~~~~--------------------------------~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 97 HPSTILEVNM-KGEVLS----KTEFETGIER--------------------------------PHAQFRQINKNKKGNYL 139 (276)
T ss_dssp TTEEEEEECT-TSCEEE----EEEECCSCSS--------------------------------GGGSCSCCEECTTSCEE
T ss_pred CCCEEEEEeC-CCCEEE----EEeccCCCCc--------------------------------ccccccCceECCCCCEE
Confidence 778888876 454332 1111000000 00000014567888754
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+ +...++.|..||.. ++.+.++.. . ....++. ..++ |. +++++..++.|..+|..+ ++
T Consensus 140 v--~~~~~~~v~~~d~~-G~~~w~~~~--------~-----~~~~~~~-~~~~---g~-~~v~~~~~~~v~~~d~~t-G~ 197 (276)
T 3no2_A 140 V--PLFATSEVREIAPN-GQLLNSVKL--------S-----GTPFSSA-FLDN---GD-CLVACGDAHCFVQLNLES-NR 197 (276)
T ss_dssp E--EETTTTEEEEECTT-SCEEEEEEC--------S-----SCCCEEE-ECTT---SC-EEEECBTTSEEEEECTTT-CC
T ss_pred E--EecCCCEEEEECCC-CCEEEEEEC--------C-----CCcccee-EcCC---CC-EEEEeCCCCeEEEEeCcC-Cc
Confidence 4 45668999999998 998888873 1 1233444 6666 55 788888888999999998 88
Q ss_pred ceEeeecCC------cceEEEEEeCCCCeEEEecC--C------CcEEEEec-CCCeeeEe
Q 021291 244 PLTAMKVHL------EPVLCLSIDESCNGGISGGA--D------QKIVLYNL-DHSTYVLF 289 (314)
Q Consensus 244 ~~~~~~~h~------~~v~~~~~~~~~~~l~s~s~--d------g~i~iw~~-~~~~~~~~ 289 (314)
.+.++..+. ..+..+...++|..+++... . +..+++++ .+++.++.
T Consensus 198 ~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 198 IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred EEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 888876432 23788888999998877632 1 23456666 45555554
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=7.1e-13 Score=110.46 Aligned_cols=234 Identities=11% Similarity=-0.070 Sum_probs=135.5
Q ss_pred eEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEE-------------------EEEcccCCCCeEEEe
Q 021291 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS-------------------VATGPSIGLNKVISQ 82 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~l~s~ 82 (314)
..+.|+|||++|+.++.++.|++||+.+++.......+.. .... +.|+| +++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~sp--dg~~~~~~ 159 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQP--LTSWEKFA 159 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCC--CCSHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc--cCCCCCEEEeccCCccccccccccccCC--CCcceeee
Confidence 3488999999999999999999999998877665554432 1222 34566 76766644
Q ss_pred -----ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeee-eeccccccccCC-----CCcceeeccCCceeeecCCCC
Q 021291 83 -----GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL-VKEPYANAKQAN-----EPKDCYEREVGETVDTDSLCD 151 (314)
Q Consensus 83 -----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 151 (314)
..+..|.+||+.+++... +. ..........+++ ............ .....+++.... ........
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~--~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~ 235 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEV--IH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHA 235 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEE--EE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCC
T ss_pred eeccCCCcceEEEEECCCCcEEe--ec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccC
Confidence 356789999998876422 21 1222223334444 222222221111 123333333322 11122211
Q ss_pred CC-----ceeccCCCceEEEeecC---cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecC-CCCCCce
Q 021291 152 SK-----DDVPAEGPKYMAVAGEQ---LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFV 222 (314)
Q Consensus 152 ~~-----~~~~~~~~~~~~~~g~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p-~~~~g~~ 222 (314)
.. ++|+|+|+.+++++... ++.|++||+.+++....... .. .. +. |+| + |+
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-------------~~-~~-~~-~s~~d---g~- 295 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-------------PP-CS-HL-MSNFD---GS- 295 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-------------CS-EE-EE-EECSS---SS-
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-------------CC-CC-CC-ccCCC---Cc-
Confidence 12 68999998776543221 14599999988765432221 11 11 44 998 7 55
Q ss_pred EEEEee----------------cCCcEEEEEccCCCCceEeeecCCc-----------ceEEEEEeCCCCeEEEecC-CC
Q 021291 223 NVLAGY----------------EDGSILVWDIRNPGIPLTAMKVHLE-----------PVLCLSIDESCNGGISGGA-DQ 274 (314)
Q Consensus 223 ~l~~g~----------------~dg~i~vwd~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~l~s~s~-dg 274 (314)
+++.++ .+..|++||+.+ ++. ..+..+.. .+..++|+|+|+.|+..+. ++
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~ 373 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG 373 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTT-TBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC
Confidence 565543 347899999986 443 34555544 2567899999998876654 55
Q ss_pred cEEEE--ecCCCe
Q 021291 275 KIVLY--NLDHST 285 (314)
Q Consensus 275 ~i~iw--~~~~~~ 285 (314)
...+| ++..++
T Consensus 374 ~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 374 VPAIYIADVPESY 386 (396)
T ss_dssp SCEEEEEECCTTC
T ss_pred CceEEEEEEcccc
Confidence 55555 444443
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=3.4e-12 Score=105.16 Aligned_cols=119 Identities=12% Similarity=0.153 Sum_probs=79.9
Q ss_pred CCCEEEEe------cCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee----------cCCeEEEEe
Q 021291 29 TKPILFAG------TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (314)
Q Consensus 29 ~~~~l~s~------~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~v~iwd 92 (314)
++++++.. ..|+.|.+||..+++.+..+.... .+ .++|+| +++++++++ .+++|.+||
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~--~p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF--NG--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE--EE--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC--CC--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEE
Confidence 45555543 247899999999999888877653 33 899999 999999886 367899999
Q ss_pred CCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcC
Q 021291 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (314)
..+.+.+. ++........ ... .-..++++|+|++++++....++
T Consensus 88 ~~t~~~~~----~i~~~~~~~~---~g~-----------------------------~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 88 ADKLTFEK----EISLPPKRVQ---GLN-----------------------------YDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp TTTCCEEE----EEEECTTBCC---BCC-----------------------------CGGGEEECTTSSEEEEEEESSSE
T ss_pred CcCCcEEE----EEEcCccccc---cCC-----------------------------CcceEEECCCCCEEEEECCCCCC
Confidence 98765432 2211100000 000 00006799999988765433368
Q ss_pred eEEEEecCCCceeee-ec
Q 021291 173 EVEIWDLNTAERCTR-LH 189 (314)
Q Consensus 173 ~i~vwd~~~~~~~~~-~~ 189 (314)
.|.+||+.+++.+.. +.
T Consensus 132 ~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp EEEEEETTTTEEEEEEGG
T ss_pred eEEEEECCCCcEEEEEec
Confidence 999999999988777 54
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=7.6e-12 Score=100.93 Aligned_cols=258 Identities=9% Similarity=0.029 Sum_probs=149.7
Q ss_pred CCCCCCCCCceEEecCCCCceeEEEEccCCCEEEE-------ecCCCeEEEEeCCCCeEEEEEe----ccCCcccEEEEE
Q 021291 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFA-------GTTGGELRIWDTVQHRTVSSSW----VHSAAHGIVSVA 69 (314)
Q Consensus 1 m~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s-------~~~dg~v~iwd~~~~~~~~~~~----~~~~~~~v~~~~ 69 (314)
|......++.. .+...-....+++|+++++++++ +..++.|.+||..+++...... ++. ..+.+++
T Consensus 1 ~~i~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~ 77 (314)
T 1pjx_A 1 MEIPVIEPLFT-KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG--GIPAGCQ 77 (314)
T ss_dssp CCSCEECCCCE-EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE--CCEEEEE
T ss_pred CccccccHhHh-hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC--CCCceEE
Confidence 33433333433 33445556789999999988888 6778999999988776543221 122 3489999
Q ss_pred EcccCC-CCeEEEeecCCeEEEEeCCCCCCCCCCe-eeee----cceeeEEEeeeeeccccccccCCC------------
Q 021291 70 TGPSIG-LNKVISQGRDGTVKCWDIENGGLSSNPS-LTIK----TNSYHFCKLSLVKEPYANAKQANE------------ 131 (314)
Q Consensus 70 ~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~------------ 131 (314)
+++ + ++++++. ..+.|.+||.. ++... . .... ........+...+ .........
T Consensus 78 ~~~--~~g~l~v~~-~~~~l~~~d~~-g~~~~--~~~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 78 CDR--DANQLFVAD-MRLGLLVVQTD-GTFEE--IAKKDSEGRRMQGCNDCAFDYEG--NLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp ECS--SSSEEEEEE-TTTEEEEEETT-SCEEE--CCSBCTTSCBCBCCCEEEECTTS--CEEEEECBCBCTTSCCCBTTS
T ss_pred Eec--CCCcEEEEE-CCCCEEEEeCC-CCEEE--EEeccCCCccccCCcCEEECCCC--CEEEEecCccccccccccccc
Confidence 999 7 5555544 44579999988 54321 1 0100 0111112222111 111111110
Q ss_pred --CcceeeccCCceeeecCC---CCCCceec----cCCCceEEEeecCcCeEEEEecC-CCcee--eeecccccCCCCCc
Q 021291 132 --PKDCYEREVGETVDTDSL---CDSKDDVP----AEGPKYMAVAGEQLSEVEIWDLN-TAERC--TRLHQNSCGGSPNF 199 (314)
Q Consensus 132 --~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~g~~d~~i~vwd~~-~~~~~--~~~~~~~~~~~~~h 199 (314)
...++.+........... ....++++ ++++.+++ +...++.|.+||+. +++.. ..+.. ..++
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v-~~~~~~~i~~~~~~~~g~~~~~~~~~~-----~~~~ 223 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIV-AETPTKKLWSYDIKGPAKIENKKVWGH-----IPGT 223 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEE-EETTTTEEEEEEEEETTEEEEEEEEEE-----CCCC
T ss_pred CCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEE-EECCCCeEEEEECCCCCccccceEEEE-----CCCC
Confidence 133444432221111111 11117888 88876655 44556899999986 44321 11110 0011
Q ss_pred CCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCC-eEEEecCCCcEEE
Q 021291 200 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVL 278 (314)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~i 278 (314)
.......+. ++++ |+ ++++...++.|.+||.++ ++.+..+..+...+.+++|++++. ++++...++.|..
T Consensus 224 ---~~~~p~~i~-~d~~---G~-l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 224 ---HEGGADGMD-FDED---NN-LLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp ---SSCEEEEEE-EBTT---CC-EEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ---CCCCCCceE-ECCC---CC-EEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEE
Confidence 003456676 8887 55 666666788999999886 666667777778899999999998 4456666788999
Q ss_pred EecCCC
Q 021291 279 YNLDHS 284 (314)
Q Consensus 279 w~~~~~ 284 (314)
|+++..
T Consensus 295 ~~~~~~ 300 (314)
T 1pjx_A 295 FEWQRN 300 (314)
T ss_dssp EECSSC
T ss_pred EeCCCC
Confidence 998754
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=3.8e-11 Score=99.10 Aligned_cols=260 Identities=8% Similarity=-0.011 Sum_probs=152.1
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEec----------CCCeEEEEeCCCCeEEEEEecc-CC----cccEEEEEEcc
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGP 72 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-~~----~~~v~~~~~~~ 72 (314)
.+.+.++..-..+ .++++|||++|+.+. .++.|.+||..+.+.+..+... .. ......++|+|
T Consensus 57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 3444555433333 899999999998875 3678999999988888776543 00 01245899999
Q ss_pred cCCCCeEEEeec--CCeEEEEeCCCCCCCCCCeee-eecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec--
Q 021291 73 SIGLNKVISQGR--DGTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-- 147 (314)
Q Consensus 73 ~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 147 (314)
|+++|+.+.. +++|.++| .+++... . +..... ..+.+............+....++. ..+.....
T Consensus 135 --DG~~l~v~n~~~~~~v~viD-~t~~~~~----~~i~~~~~--~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~ 204 (373)
T 2mad_H 135 --NNADLLFFQFAAGPAVGLVV-QGGSSDD----QLLSSPTC--YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLV 204 (373)
T ss_pred --CCCEEEEEecCCCCeEEEEE-CCCCEEe----EEcCCCce--EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEec
Confidence 9999998874 57899999 8886543 2 221111 1111111111112222333344444 33322110
Q ss_pred ---CCCCCC----ceeccCCCceEEEeecCcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCC
Q 021291 148 ---SLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (314)
Q Consensus 148 ---~~~~~~----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~ 218 (314)
..+... ..+.+++..+++++ .++.+.+.|+..... +..+..... ..... .........+. ++|+
T Consensus 205 ~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~v~vid~~~~~~~v~~~~~~~~~-~~~~~-~~~p~g~~~~~-~s~d-- 277 (373)
T 2mad_H 205 GAMLTAAQNLLTQPAQANKSGRIVWPV--YSGKILQADISAAGATNKAPIDALSG-GRKAD-TWRPGGWQQVA-YLKS-- 277 (373)
T ss_pred cccccCCcceeecceeEecCCEEEEEc--CCceEEEEeccCCcceEeeeeeecCC-ccccc-ceecCceEeEE-ECCC--
Confidence 011111 34566666665544 358899999975532 222221000 00000 00011122244 8887
Q ss_pred CCceEEEEee----------cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCC-eEEEec-CCCcEEEEecCCCee
Q 021291 219 QGFVNVLAGY----------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGG-ADQKIVLYNLDHSTY 286 (314)
Q Consensus 219 ~g~~~l~~g~----------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~dg~i~iw~~~~~~~ 286 (314)
+. .+++.. .++.|.++|+.+ .+.+..+.. .....+++|+++|+ +++++. .++.|.++|+.+++.
T Consensus 278 -~~-~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 -SD-GIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred -CC-EEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 33 344332 235799999998 788888864 34689999999999 777777 589999999999998
Q ss_pred eEee
Q 021291 287 VLFG 290 (314)
Q Consensus 287 ~~~~ 290 (314)
+..+
T Consensus 354 v~~i 357 (373)
T 2mad_H 354 DQST 357 (373)
T ss_pred Eeee
Confidence 7663
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.51 E-value=3.4e-11 Score=97.99 Aligned_cols=203 Identities=12% Similarity=0.018 Sum_probs=125.6
Q ss_pred ecCCCCceeEEEEccCCCEEEEecCC----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec-----
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR----- 84 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----- 84 (314)
+..+...+.+++++++|+++++...+ +.|.+||.++++....+........+.+++++| +++++++...
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS--KGGFYFTDFRGYSTN 159 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT--TSCEEEEECCCBTTB
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC--CCCEEEEeccccccC
Confidence 33567889999999999988877766 689999988776553443222224589999999 8887776553
Q ss_pred -CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCce
Q 021291 85 -DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (314)
Q Consensus 85 -dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (314)
.+.|..+|..+++.. .+..... .+.. ++|+|+++.+
T Consensus 160 ~~~~l~~~~~~~~~~~-----~~~~~~~-----~~~~---------------------------------i~~~~dg~~l 196 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVT-----PIIQNIS-----VANG---------------------------------IALSTDEKVL 196 (333)
T ss_dssp CCEEEEEECTTSCCEE-----EEEEEES-----SEEE---------------------------------EEECTTSSEE
T ss_pred CCceEEEEeCCCCEEE-----EeecCCC-----cccc---------------------------------eEECCCCCEE
Confidence 245666665544321 1100000 0000 5688998766
Q ss_pred EEEeecCcCeEEEEecCC-CceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCC
Q 021291 164 MAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (314)
++ +.+.++.|.+||+.+ +.....+.... ............+. ++++ |+ ++++...++.|.+||.. +
T Consensus 197 ~v-~~~~~~~i~~~d~~~~g~~~~~~~~~~-----~~~~~~~~~~~~i~-~d~~---G~-l~v~~~~~~~v~~~d~~--g 263 (333)
T 2dg1_A 197 WV-TETTANRLHRIALEDDGVTIQPFGATI-----PYYFTGHEGPDSCC-IDSD---DN-LYVAMYGQGRVLVFNKR--G 263 (333)
T ss_dssp EE-EEGGGTEEEEEEECTTSSSEEEEEEEE-----EEECCSSSEEEEEE-EBTT---CC-EEEEEETTTEEEEECTT--S
T ss_pred EE-EeCCCCeEEEEEecCCCcCcccccceE-----EEecCCCCCCCceE-ECCC---CC-EEEEEcCCCEEEEECCC--C
Confidence 65 444568999999964 33322211000 00000012455666 8887 55 66666677899999984 5
Q ss_pred CceEeeecCCc------ceEEEEEeCCCCeEEEecCCC
Q 021291 243 IPLTAMKVHLE------PVLCLSIDESCNGGISGGADQ 274 (314)
Q Consensus 243 ~~~~~~~~h~~------~v~~~~~~~~~~~l~s~s~dg 274 (314)
+.+..+..+.. .+.+++|++++..|+.++.++
T Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 264 YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 66666654433 689999999986666555543
No 189
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=1.1e-10 Score=97.54 Aligned_cols=229 Identities=12% Similarity=-0.017 Sum_probs=146.7
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC--eEEEEeCCCC
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~ 96 (314)
.....++|+++++++++...++.|++||..+++......... ... ++|++ +++.|+++..++ .|.+|+...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~---~~~-ia~~~--~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK---GGK-PAVTK--DKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC---BCB-CEECT--TSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC---CCc-eeEec--CCCcEEEEecCCCceEEEEEcCCC
Confidence 457889999999988888888999999998877665554432 233 99999 888888888766 7888887654
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v 176 (314)
.... .+.. ... . ....-..++++|++..+++ ...++.|+.
T Consensus 205 ~~~~----~~g~-------~~~---~------------------------~~~~p~~iav~p~~g~lyv--~d~~~~I~~ 244 (409)
T 3hrp_A 205 WAPT----RIGQ-------LGS---T------------------------FSGKIGAVALDETEEWLYF--VDSNKNFGR 244 (409)
T ss_dssp TCEE----EEEE-------CCT---T------------------------SCSCCCBCEECTTSSEEEE--ECTTCEEEE
T ss_pred ceeE----Eeee-------ccc---h------------------------hcCCcEEEEEeCCCCeEEE--EECCCcEEE
Confidence 3211 1100 000 0 0000001678886556665 334789999
Q ss_pred EecCCCceeeeecccccCCCCCcCCCCCceee-eEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCC---
Q 021291 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM-AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL--- 252 (314)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~-~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~--- 252 (314)
||..++... .+... ...++. ..... .++ |+|++ +. ++++...++.|+.|+... . +..+.++.
T Consensus 245 ~d~~~~~~~-~~~~~---~~~g~~---~~~P~~~ia-~~p~~--g~-lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 245 FNVKTQEVT-LIKQL---ELSGSL---GTNPGPYLI-YYFVD--SN-FYMSDQNLSSVYKITPDG--E-CEWFCGSATQK 310 (409)
T ss_dssp EETTTCCEE-EEEEC---CCCSCC---CCSSCCEEE-EETTT--TE-EEEEETTTTEEEEECTTC--C-EEEEEECTTCC
T ss_pred EECCCCCEE-EEecc---cccCCC---CCCccccEE-EeCCC--CE-EEEEeCCCCEEEEEecCC--C-EEEEEeCCCCC
Confidence 999876532 22100 000111 11112 666 99962 43 667777788999999763 3 33443332
Q ss_pred ------------cceEEEEEeCCCCeEEEec-CCCcEEEEecCCCeeeE---------------------eeeeeeecCC
Q 021291 253 ------------EPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTYVL---------------------FGIGFVCDQE 298 (314)
Q Consensus 253 ------------~~v~~~~~~~~~~~l~s~s-~dg~i~iw~~~~~~~~~---------------------~~~~~~~~~~ 298 (314)
.....++++++|.++++-+ .++.|+.|++.+++... ...+++.+++
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~ 390 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE 390 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS
T ss_pred CcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC
Confidence 3478999999999888888 88999999977775432 1344667777
Q ss_pred Cceeceeec
Q 021291 299 GNKFGTTWH 307 (314)
Q Consensus 299 ~~~~~~~w~ 307 (314)
|.++.+.|.
T Consensus 391 g~lyVad~~ 399 (409)
T 3hrp_A 391 GGYWIAEAW 399 (409)
T ss_dssp SEEEEEEST
T ss_pred CCEEEEECC
Confidence 777766554
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=1.6e-11 Score=110.23 Aligned_cols=205 Identities=14% Similarity=0.053 Sum_probs=134.8
Q ss_pred eeEEEEccCCCEEEEecCCCe----------------EEEEeCCCCeE--EEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 21 VTDVCFHQTKPILFAGTTGGE----------------LRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 21 v~~~~~~~~~~~l~s~~~dg~----------------v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
+..++|+|||+.|+.++.++. |++|++.+++. ...+....+...+..+.|+| |+++|+.+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l~~~ 250 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD--DGRYVLLS 250 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT--TSCEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC--CCCEEEEE
Confidence 678999999999998888766 99999988752 23333322224478999999 99998876
Q ss_pred ec-----CCeEEEEeCCC------CCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCC
Q 021291 83 GR-----DGTVKCWDIEN------GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (314)
Q Consensus 83 ~~-----dg~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (314)
+. +..|.+||+.+ +... ...+........
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~------------------------------------- 290 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGILK---WVKLIDNFEGEY------------------------------------- 290 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSSCC---CEEEECSSSSCE-------------------------------------
T ss_pred EEccCCCccEEEEEECcccccccCCccc---eEEeeCCCCcEE-------------------------------------
Confidence 65 56899999976 3210 111111100000
Q ss_pred CCceeccCCCceEEEeec--CcCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEe
Q 021291 152 SKDDVPAEGPKYMAVAGE--QLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 227 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~--~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g 227 (314)
..|+++|+.+++.+.. .++.|.+||+.++.. ...+. .|.. ...+..+. |+++ +. ++++.
T Consensus 291 --~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~--~~~~~~~~-~~~~---~~-lv~~~ 353 (710)
T 2xdw_A 291 --DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--------PEHE--KDVLEWVA-CVRS---NF-LVLCY 353 (710)
T ss_dssp --EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--------CCCS--SCEEEEEE-EETT---TE-EEEEE
T ss_pred --EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc--------CCCC--CCeEEEEE-EEcC---CE-EEEEE
Confidence 2377888877765432 134799999987642 23343 2211 12455666 7754 44 78888
Q ss_pred ecCCc--EEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEE-E---ecCCCcEEEEecCCCe
Q 021291 228 YEDGS--ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-S---GGADQKIVLYNLDHST 285 (314)
Q Consensus 228 ~~dg~--i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s---~s~dg~i~iw~~~~~~ 285 (314)
..++. |++||+.+ ++.+..+..+...|..+.+++++..|+ + ....+.|+.||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88885 55667655 667777887777889999999887654 2 2245789999998876
No 191
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.48 E-value=3.7e-12 Score=114.94 Aligned_cols=86 Identities=9% Similarity=-0.028 Sum_probs=66.3
Q ss_pred CCCceEEecCCCCce-----eEEEEccCCCEEEEecCC---------CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcc
Q 021291 7 PPDPVAVLRGHRASV-----TDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGP 72 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v-----~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 72 (314)
.++....+.+|.... ..++|||||++|+.++.+ +.+.+||+.+++.. .+..+. ..+...+|||
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~--~~~~~~~~SP 121 (740)
T 4a5s_A 45 YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIP--NNTQWVTWSP 121 (740)
T ss_dssp TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCC--TTEEEEEECS
T ss_pred CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCC--CcceeeEECC
Confidence 345566677776432 347899999999998876 56779999998754 344454 4599999999
Q ss_pred cCCCCeEEEeecCCeEEEEeCCCCCC
Q 021291 73 SIGLNKVISQGRDGTVKCWDIENGGL 98 (314)
Q Consensus 73 ~~~~~~l~s~~~dg~v~iwd~~~~~~ 98 (314)
||+.|+.+. |+.|++||+.+++.
T Consensus 122 --dG~~la~~~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 122 --VGHKLAYVW-NNDIYVKIEPNLPS 144 (740)
T ss_dssp --STTCEEEEE-TTEEEEESSTTSCC
T ss_pred --CCCEEEEEE-CCeEEEEECCCCce
Confidence 999999885 68999999988764
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=1.1e-11 Score=111.87 Aligned_cols=247 Identities=11% Similarity=0.016 Sum_probs=145.6
Q ss_pred CCCceeEEEEccCCCEEEEecCC-----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe----
Q 021291 17 HRASVTDVCFHQTKPILFAGTTG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT---- 87 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~---- 87 (314)
|...+..++|||||++||.++.+ ..|++||+.+++.+... .+. ..+..++|+| | +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~--~~~~~~~wsp--D-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKW--VKFSGLAWLG--N-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEE--EESCCCEEST--T-SEEEEEECCCC----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCC--ceeccEEEEC--C-CEEEEEEecCccccc
Confidence 44468899999999999876543 46999999998876531 121 1135789999 9 88888776654
Q ss_pred ----------EEEEeCCCCCCCCCCeeeeecc--eeeEEEeeeeeccccccccC----CCCcceeeccCCcee-eecCCC
Q 021291 88 ----------VKCWDIENGGLSSNPSLTIKTN--SYHFCKLSLVKEPYANAKQA----NEPKDCYEREVGETV-DTDSLC 150 (314)
Q Consensus 88 ----------v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~ 150 (314)
|++|++.++......++..... ......+++.+......... .....++++...... ...+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 8999998765322112222221 12233344444333322222 123344455443111 111212
Q ss_pred CC-C--ceeccCCCceEEEeec--CcCeEEEEecCCCc-eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEE
Q 021291 151 DS-K--DDVPAEGPKYMAVAGE--QLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (314)
Q Consensus 151 ~~-~--~~~~~~~~~~~~~~g~--~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l 224 (314)
+. . ..++|+|+.+++.+.. .++.|.+||+.++. ....+.. .+ ...+..+. +. + +. ++
T Consensus 315 ~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~-------~~----~~~l~~~~-~~-~---~~-lv 377 (741)
T 1yr2_A 315 DLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP-------ES----KDNLESVG-IA-G---NR-LF 377 (741)
T ss_dssp SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC-------CC----SSEEEEEE-EE-B---TE-EE
T ss_pred CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec-------CC----CCeEEEEE-EE-C---CE-EE
Confidence 22 2 3345888887765432 24569999998752 3333331 22 22344444 54 2 33 78
Q ss_pred EEeecCCcEEEEEccCCCCceEeeec-CCcceEEEEEeCCCCeEE----EecCCCcEEEEecCCCee
Q 021291 225 LAGYEDGSILVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 225 ~~g~~dg~i~vwd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~----s~s~dg~i~iw~~~~~~~ 286 (314)
++...|+..+||.++..+.....+.. +...|..+.+++++..|+ +....+.|++||+.+++.
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 88888998888766532555666654 356788899999887665 334468899999988763
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.46 E-value=6.7e-11 Score=96.73 Aligned_cols=259 Identities=8% Similarity=0.020 Sum_probs=148.9
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeccCC-----cccEEEEEEccc
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSA-----AHGIVSVATGPS 73 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~ 73 (314)
+.+.++..-..+ .++++|||++|+.+. .++.|.+||..+.+.+..+....+ ......++|+|
T Consensus 70 ~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp- 146 (386)
T 3sjl_D 70 RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP- 146 (386)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-
T ss_pred eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-
Confidence 344444433333 499999999887765 367899999999999888864320 01246799999
Q ss_pred CCCCeEEEeec--CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC-Cceeee---c
Q 021291 74 IGLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETVDT---D 147 (314)
Q Consensus 74 ~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~ 147 (314)
||++++.+.. ++.|.++|+.+++.+. ++..... ..+.+............+....+++.. ++.... .
T Consensus 147 -DGk~lyVan~~~~~~VsVID~~t~~vv~----tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~ 219 (386)
T 3sjl_D 147 -DGKTLLFYQFSPAPAVGVVDLEGKAFKR----MLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV 219 (386)
T ss_dssp -TSSEEEEEECSSSCEEEEEETTTTEEEE----EEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCC
T ss_pred -CCCEEEEEEcCCCCeEEEEECCCCcEEE----EEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecce
Confidence 9999888764 6899999999987644 2222111 111122211111222233333344433 221110 1
Q ss_pred CCCCCC-----ceec-cCCCceEEEeecCcCeEEEEecCCCce--eeeecc-cc-cCCCCCcCCCCCceeeeEEEecCCC
Q 021291 148 SLCDSK-----DDVP-AEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQ-NS-CGGSPNFSSKGRGMCMAVQAYLPSK 217 (314)
Q Consensus 148 ~~~~~~-----~~~~-~~~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~-~~-~~~~~~h~~~~~~~~~~~~~~~p~~ 217 (314)
+..... ..|. ++|+.++ ++. +|.|++.|+.+... ...+.. .. ... .+. ..+....+. ++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~dG~~~~-vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~-~g~---~p~g~q~~a-~~~~- 290 (386)
T 3sjl_D 220 FHPEDEFLINHPAYSQKAGRLVW-PTY--TGKIHQIDLSSGDAKFLPAVEALTEAERA-DGW---RPGGWQQVA-YHRA- 290 (386)
T ss_dssp CSCTTSCBCSCCEEETTTTEEEE-EBT--TSEEEEEECTTSSCEECCCEESSCHHHHH-TTE---EECSSSCEE-EETT-
T ss_pred eccccccccccceeEcCCCcEEE-EeC--CCEEEEEECCCCcceeecceecccccccc-ccc---cCCCcceee-ECCC-
Confidence 111111 3453 5664333 333 58999999976542 222210 00 000 000 001112233 7776
Q ss_pred CCCceEEEEeec---------CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCC-eEEE-ecCCCcEEEEecCCCee
Q 021291 218 SQGFVNVLAGYE---------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGIS-GGADQKIVLYNLDHSTY 286 (314)
Q Consensus 218 ~~g~~~l~~g~~---------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s-~s~dg~i~iw~~~~~~~ 286 (314)
++.++++-.. .+.|.++|+.+ .+.+..+.. ...+++|+++++++ +|++ ...++.|.++|..+++.
T Consensus 291 --~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 291 --LDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp --TTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred --CCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 3323333221 25799999998 888887764 34788999999996 5555 55689999999999998
Q ss_pred eEee
Q 021291 287 VLFG 290 (314)
Q Consensus 287 ~~~~ 290 (314)
+..+
T Consensus 367 ~~~i 370 (386)
T 3sjl_D 367 LRSV 370 (386)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7664
No 194
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=3.6e-11 Score=100.04 Aligned_cols=250 Identities=8% Similarity=-0.001 Sum_probs=149.6
Q ss_pred EEEEccCCCEEEEec----------CCCeEEEEeCCCCeEEEEEecc-CC----cccEEEEEEcccCCCCeEEEeec--C
Q 021291 23 DVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGPSIGLNKVISQGR--D 85 (314)
Q Consensus 23 ~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~~~~~l~s~~~--d 85 (314)
.++++|||++|+.+. .++.|.++|..+++.+..+... .. ......+.|+| |+++++.+.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp--DGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP--DNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT--TSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC--CCCEEEEEecCCC
Confidence 799999999888775 3678999999999998887643 00 01245789999 9999998874 5
Q ss_pred CeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeee---cCCCCC-----Cceec
Q 021291 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT---DSLCDS-----KDDVP 157 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~ 157 (314)
++|.+.|+.+++.+. ++..... ....+............+....++....+.... .+.... ...+.
T Consensus 200 ~~VsVID~~t~kvv~----~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~ 273 (426)
T 3c75_H 200 PAVGVVDLEGKTFDR----MLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFS 273 (426)
T ss_dssp CEEEEEETTTTEEEE----EEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEEC
T ss_pred CeEEEEECCCCeEEE----EEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeec
Confidence 799999999987644 2222111 111222211111222222333333322221110 111100 15678
Q ss_pred cCCCceEEEeecCcCeEEEEecCCCcee--eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee-------
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY------- 228 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~------- 228 (314)
+++..+++++ ..+.|.+.|....... ..+..... ....... .......+. ++|+ +..++++..
T Consensus 274 ~dg~~~~~~s--~~g~V~ViD~~~~~~~v~~~~~~~~~-~~i~~g~-~p~g~~~va-~s~d---g~rlyVa~~~~~~gth 345 (426)
T 3c75_H 274 LRSGRLVWPT--YTGKIFQADLTAEGATFRAPIEALTE-AERADDW-RPGGWQQTA-YHRQ---SDRIYLLVDQRDEWKH 345 (426)
T ss_dssp TTTCEEEEEB--TTSEEEEEEECSSCEEECCCEESSCT-TTGGGTE-EECSSSCEE-EEGG---GTEEEEEEEECCTTCT
T ss_pred CCCCEEEEEe--CCCcEEEEeccCCceEEeeeeeeccc-ccccccc-ccCCceeeE-EcCC---CCEEEEEecccccccc
Confidence 8988877644 3589999998755422 11110000 0000000 000111244 8887 432333322
Q ss_pred --cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCC-eEEEec-CCCcEEEEecCCCeeeEee
Q 021291 229 --EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGG-ADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 229 --~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~dg~i~iw~~~~~~~~~~~ 290 (314)
.++.|.++|..+ .+.+..+.. ......+.|+++++ ++++.. .++.|.++|+.+++.+..+
T Consensus 346 k~~s~~VsVID~~T-~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 346 KAASRFVVVLNAET-GERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEECCC-CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 135799999998 888888864 23578999999998 777777 5899999999999988664
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.44 E-value=1.9e-11 Score=100.01 Aligned_cols=236 Identities=10% Similarity=-0.026 Sum_probs=129.4
Q ss_pred CCCCCCCCCceEEecCCCCceeEEEEccCCCEEEEec---------CCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEc
Q 021291 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGT---------TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71 (314)
Q Consensus 1 m~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 71 (314)
|++.+.+.+.+. ....+...++ ||++++... .++.|.+||+.+++... + ..+..++|+
T Consensus 1 ~~~~~~~~~~l~----~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l------~~~~~~~~S 67 (347)
T 2gop_A 1 MSSIEWNEKTFA----KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I------ENATMPRIS 67 (347)
T ss_dssp ---------CCC----CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E------ESCEEEEEC
T ss_pred CCcccCCcccce----eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c------ccCCCeEEC
Confidence 556555444332 2345777888 888887642 36789999998876543 3 227899999
Q ss_pred ccCCCCeEEEeecC---C--eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccC-----------------
Q 021291 72 PSIGLNKVISQGRD---G--TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA----------------- 129 (314)
Q Consensus 72 ~~~~~~~l~s~~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 129 (314)
| ||+.|+.++.+ + .|.+||+.+++... +..... .....+++.+.........
T Consensus 68 p--Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~--l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 68 P--DGKKIAFMRANEEKKVSEIWVADLETLSSKK--ILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp T--TSSEEEEEEEETTTTEEEEEEEETTTTEEEE--EEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred C--CCCEEEEEEeccCCCcceEEEEECCCCceEE--EEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 9 99999877654 3 48888888765322 222211 3333344333322222211
Q ss_pred ---------CCCcceeeccCCce-eeecCCCCCCceeccCCCceEEEeecC--------cCeEEEEecCCCceeeeeccc
Q 021291 130 ---------NEPKDCYEREVGET-VDTDSLCDSKDDVPAEGPKYMAVAGEQ--------LSEVEIWDLNTAERCTRLHQN 191 (314)
Q Consensus 130 ---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~--------d~~i~vwd~~~~~~~~~~~~~ 191 (314)
......+++..+.. ..........++|+|+| +++++... ...|.++| +++ ...+.
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~-- 214 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMF-- 214 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEE--
T ss_pred cCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc-eEEec--
Confidence 11233344544433 11111211128999999 44433221 12455555 444 33333
Q ss_pred ccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC--------CcEEEEEccCCCCceEeeecCCcceEE-EEEeC
Q 021291 192 SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED--------GSILVWDIRNPGIPLTAMKVHLEPVLC-LSIDE 262 (314)
Q Consensus 192 ~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d--------g~i~vwd~~~~~~~~~~~~~h~~~v~~-~~~~~ 262 (314)
.+ .... . ++|+ |+ .|+.++.+ ..|.+|| + ++.......|...+.. +.|+
T Consensus 215 ------~~-----~~~~--~-~spd---g~-~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s- 272 (347)
T 2gop_A 215 ------EK-----VSFY--A-VDSD---GE-RILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD- 272 (347)
T ss_dssp ------EE-----ESEE--E-EEEC---SS-CEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-
T ss_pred ------cC-----ccee--e-ECCC---CC-EEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-
Confidence 11 1121 2 5776 55 45554433 4688888 3 5555555566778886 8999
Q ss_pred CCCeEEEecCCCcEEEEecCCCee
Q 021291 263 SCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 263 ~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
++ ++++++.++.+++| +++++.
T Consensus 273 dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 273 GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp TE-EEEEEEETTEEEEE-EESSSE
T ss_pred Cc-EEEEEecCCcEEEE-EcCCce
Confidence 88 88999999999999 875543
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=2e-10 Score=91.92 Aligned_cols=231 Identities=12% Similarity=0.100 Sum_probs=136.7
Q ss_pred ecCCCCceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEe
Q 021291 14 LRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 92 (314)
+..+..--.+..|+++ +.++++...++.|..||..+++. ..+.. . ..+.++++++ +++++++ . ++.|.+||
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~--~~~~~i~~~~--dG~l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-D--APVSSVALRQ--SGGYVAT-I-GTKFCALN 79 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-S--SCEEEEEEBT--TSSEEEE-E-TTEEEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-C--CceEEEEECC--CCCEEEE-E-CCeEEEEE
Confidence 4444455678999994 56777778889999999987765 33332 2 4489999999 8885544 4 56899999
Q ss_pred CCCCCCCCCCeeeeecc----eeeEEEeeeeecccccccc--------CCCCcceeeccCCceeeecC---CCCCCceec
Q 021291 93 IENGGLSSNPSLTIKTN----SYHFCKLSLVKEPYANAKQ--------ANEPKDCYEREVGETVDTDS---LCDSKDDVP 157 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 157 (314)
.++++... ....... ......+...+........ ......++.+.......... .....++|+
T Consensus 80 ~~~g~~~~--~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~s 157 (297)
T 3g4e_A 80 WKEQSAVV--LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWS 157 (297)
T ss_dssp TTTTEEEE--EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEEC
T ss_pred CCCCcEEE--EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEc
Confidence 98775321 1111111 1111222221111110000 01223455554332211111 111128999
Q ss_pred cCCCceEEEeecCcCeEEEEec--CCCcee--eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcE
Q 021291 158 AEGPKYMAVAGEQLSEVEIWDL--NTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (314)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~vwd~--~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (314)
|+++.+++ +.+.++.|.+||+ .++... ..+.. . ....+....++ ++++ |+ +.++...++.|
T Consensus 158 pdg~~lyv-~~~~~~~i~~~~~d~~~G~~~~~~~~~~--------~-~~~~~~p~g~~-~d~~---G~-lwva~~~~~~v 222 (297)
T 3g4e_A 158 LDHKIFYY-IDSLSYSVDAFDYDLQTGQISNRRSVYK--------L-EKEEQIPDGMC-IDAE---GK-LWVACYNGGRV 222 (297)
T ss_dssp TTSCEEEE-EEGGGTEEEEEEECTTTCCEEEEEEEEE--------C-CGGGCEEEEEE-EBTT---SC-EEEEEETTTEE
T ss_pred CCCCEEEE-ecCCCCcEEEEeccCCCCcccCcEEEEE--------C-CCCCCCCCeeE-ECCC---CC-EEEEEcCCCEE
Confidence 99987765 4555789999987 455432 11110 0 00123456666 8877 65 66666677889
Q ss_pred EEEEccCCCCceEeeecCCcceEEEEEe-CCCCeEEEe
Q 021291 234 LVWDIRNPGIPLTAMKVHLEPVLCLSID-ESCNGGISG 270 (314)
Q Consensus 234 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~ 270 (314)
..||..+ ++.+..+..+...+++++|. |++..|...
T Consensus 223 ~~~d~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 223 IRLDPVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEECTTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred EEEcCCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 9999987 78888888877889999997 777655333
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.44 E-value=9.7e-11 Score=95.16 Aligned_cols=237 Identities=9% Similarity=-0.083 Sum_probs=146.7
Q ss_pred cCCCeEEEEeCCCCeEEEEEec----cCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeec-cee
Q 021291 37 TTGGELRIWDTVQHRTVSSSWV----HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT-NSY 111 (314)
Q Consensus 37 ~~dg~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~ 111 (314)
+.++.|.++|.++++....+.. ..-......+.+.. +..+++...++.|.+||..+++.+. ++.. ...
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~~lyv~~~~~~~v~viD~~t~~~~~----~i~~~~~p 86 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---GIGWIVVNNSHVIFAIDINTFKEVG----RITGFTSP 86 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---TEEEEEEGGGTEEEEEETTTCCEEE----EEECCSSE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---CEEEEEEcCCCEEEEEECcccEEEE----EcCCCCCC
Confidence 3489999999999887654411 11112367787754 4666677778999999999987643 2221 122
Q ss_pred eEEEeeeeecccccccc-CCCCcceeeccCCceeeecCCCC-------CC-ceeccCCCceEEEeecCcCeEEEEecCCC
Q 021291 112 HFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCD-------SK-DDVPAEGPKYMAVAGEQLSEVEIWDLNTA 182 (314)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~g~~d~~i~vwd~~~~ 182 (314)
....++... ...... .......++............+. .. +++ ++..++++..+.++.|.++|+.++
T Consensus 87 ~~i~~~~~g--~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 87 RYIHFLSDE--KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEEETT--EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred cEEEEeCCC--eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence 222222222 222222 34555666666655433222121 11 666 455666533224789999999999
Q ss_pred ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC----------CcEEEEEccCCCCceEeeecC-
Q 021291 183 ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----------GSILVWDIRNPGIPLTAMKVH- 251 (314)
Q Consensus 183 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----------g~i~vwd~~~~~~~~~~~~~h- 251 (314)
+....+.. ......+. ++|+ |+ +++++..+ +.|.++|..+ ++....+...
T Consensus 163 ~~~~~i~~-------------g~~p~~i~-~~~d---G~-l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~ 223 (328)
T 3dsm_A 163 KVVDELTI-------------GIQPTSLV-MDKY---NK-MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKL 223 (328)
T ss_dssp EEEEEEEC-------------SSCBCCCE-ECTT---SE-EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCT
T ss_pred eEEEEEEc-------------CCCccceE-EcCC---CC-EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCC
Confidence 88777762 11234454 8887 65 55555444 7899999987 6666666532
Q ss_pred CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE---------eeeeeeecC-CCceecee
Q 021291 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL---------FGIGFVCDQ-EGNKFGTT 305 (314)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~---------~~~~~~~~~-~~~~~~~~ 305 (314)
......++|+|++++|..+.. .|.+||..+++... ...+++++| ++.++.+.
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 246899999999988877654 89999998876431 245567887 66666664
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.43 E-value=4.9e-09 Score=83.60 Aligned_cols=239 Identities=4% Similarity=-0.071 Sum_probs=141.9
Q ss_pred ecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeC
Q 021291 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (314)
Q Consensus 14 l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 93 (314)
+..+...+.+++++++|+++++...++.|.+||.. ++.. .+........+.++++.+ ++..+++...++.|..||.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECC
Confidence 44566789999999999988877778899999988 5543 333221124589999999 8887777777889999998
Q ss_pred CCCCCCCCCeeeeecceeeEEEeeeeecccccccc-CCCCcceeeccCCceeeecCCCCCC----ceeccCCCceEEEee
Q 021291 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAG 168 (314)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g 168 (314)
. ++. . .+...........+............ .......++. .+............ +++.++|. +++ +.
T Consensus 86 ~-g~~-~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~ 158 (299)
T 2z2n_A 86 K-GII-K--EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWF-TE 158 (299)
T ss_dssp T-SCE-E--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEE-EE
T ss_pred C-CcE-E--EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEE-Ee
Confidence 6 321 1 11111111111111111111111111 1222233333 22222222221111 78888885 443 44
Q ss_pred cCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceE-e
Q 021291 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT-A 247 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~-~ 247 (314)
..++.|..||. +++... +... .. ...+..+. ++++ |. +.++...++.|.+||. + +.... .
T Consensus 159 ~~~~~i~~~~~-~g~~~~-~~~~------~~----~~~~~~i~-~~~~---g~-l~v~~~~~~~i~~~~~-~-g~~~~~~ 219 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDITE-FKIP------TP----ASGPVGIT-KGND---DA-LWFVEIIGNKIGRITT-S-GEITEFK 219 (299)
T ss_dssp TTTTEEEEECT-TCCEEE-EECS------ST----TCCEEEEE-ECTT---SS-EEEEETTTTEEEEECT-T-CCEEEEE
T ss_pred CCCCEEEEEcC-CCcEEE-eeCC------CC----CCcceeEE-ECCC---CC-EEEEccCCceEEEECC-C-CcEEEEE
Confidence 44688999998 665433 2210 11 22456676 8887 55 5666666789999998 4 44332 2
Q ss_pred eecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+..+...+.+++++++|.++++...++.|..||.+
T Consensus 220 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 23345678999999999877776678899999984
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=9.8e-12 Score=102.01 Aligned_cols=171 Identities=13% Similarity=0.039 Sum_probs=116.6
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCe-----------EEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeE
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-----------TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v 88 (314)
.++.+++++...++++|+.++ +++|+++..+ ...... +. . |..|+| . ++.|+++ .++.|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp--~-V~~l~f-d---~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IP--D-VIFVCF-H---GDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CT--T-EEEEEE-E---TTEEEEE-ESSEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CC--C-eeEEEE-C---CCEEEEE-cCCcE
Confidence 689999999999999999985 6679865332 112222 32 4 999999 3 4888888 88999
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEee
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (314)
++||+.+..... ........... +.+.+ ..++ .+
T Consensus 109 ~v~dv~sl~~~~----~~~~~~~~v~~--------------------------------------i~~~~--p~~a--v~ 142 (388)
T 1xip_A 109 YSLDLEELSEFR----TVTSFEKPVFQ--------------------------------------LKNVN--NTLV--IL 142 (388)
T ss_dssp EEEESSSTTCEE----EEEECSSCEEE--------------------------------------EEECS--SEEE--EE
T ss_pred EEEEchhhhccC----ccceeecceee--------------------------------------EEecC--CCEE--EE
Confidence 999998765211 11111111110 11222 2233 34
Q ss_pred cCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc--eE
Q 021291 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP--LT 246 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~--~~ 246 (314)
+.||.|.+||+.++.... +. ..+.+++ |+|+ | ++.|..||.+++|+... ... ..
T Consensus 143 ~~dG~L~v~dl~~~~~~~-~~---------------~~Vs~v~-WSpk---G---~~vg~~dg~i~~~~~~~-~~~~~k~ 198 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-LA---------------QNVTSFD-VTNS---Q---LAVLLKDRSFQSFAWRN-GEMEKQF 198 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-EE---------------ESEEEEE-ECSS---E---EEEEETTSCEEEEEEET-TEEEEEE
T ss_pred ECCCCEEEEEccCCcccc-cc---------------CCceEEE-EcCC---c---eEEEEcCCcEEEEcCCC-ccccccc
Confidence 458999999999877643 22 2577887 9998 4 67788999999998885 443 44
Q ss_pred ee------e---cCCcceEEEEEeCCCCeEEEe
Q 021291 247 AM------K---VHLEPVLCLSIDESCNGGISG 270 (314)
Q Consensus 247 ~~------~---~h~~~v~~~~~~~~~~~l~s~ 270 (314)
++ . +|...|.+|.|.+++.++++-
T Consensus 199 ~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 199 EFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 45 2 477899999999999988763
No 200
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.41 E-value=2e-13 Score=112.78 Aligned_cols=188 Identities=13% Similarity=0.070 Sum_probs=106.0
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeec
Q 021291 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (314)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 108 (314)
++..+++++.||.|+.||..+|+.+..+.. .. +.+..+.. ++..+++++.||.|+.||.++++... .+....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP--VLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC--SCCCC-------CCEEECTTTCCEEEC-----CCSE--ECSCCH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CC--ceecceEc--CCCEEEEeCCCCEEEEEECCCCceee--eeeccC
Confidence 567899999999999999999999988876 22 45555556 66788888899999999999887643 111111
Q ss_pred ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeee
Q 021291 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (314)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 188 (314)
.... ... ..+. .+..++ .++.|+.|+.||.++++.+..+
T Consensus 80 ~~~~------~~s--------------------------------p~~~-~~~~v~--~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 80 PELV------QAS--------------------------------PCRS-SDGILY--MGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp HHHH------TTC--------------------------------SCC------CC--CCEEEEEEEEECCC--------
T ss_pred cccc------ccC--------------------------------ceEe-cCCEEE--EEeCCCEEEEEECCCCcEEEEe
Confidence 0000 000 0011 223333 4556899999999999987776
Q ss_pred cccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCC---C
Q 021291 189 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC---N 265 (314)
Q Consensus 189 ~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~---~ 265 (314)
.. +. ... ++|+ +. .+++++.|+.|+.||.++ ++.+..+..+. .....++++. .
T Consensus 119 ~~--------~~--------~~~-~~p~---~~-~v~~~~~dg~v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~ 174 (369)
T 2hz6_A 119 SS--------AF--------ADS-LSPS---TS-LLYLGRTEYTITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKM 174 (369)
T ss_dssp -----------------------------------EEEEEEEEEEECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCC
T ss_pred cC--------CC--------ccc-cccc---CC-EEEEEecCCEEEEEECCC-CCEEEeEeccc--ccCccccCCccccc
Confidence 62 21 122 5664 33 788888999999999998 77665554221 1223334432 3
Q ss_pred eEEEecCCCcEEEEecCCCeeeEe
Q 021291 266 GGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 266 ~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.++.++.||.|+.||.++++.++.
T Consensus 175 ~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 175 SHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp CEEEEETSCEEEEECTTTCCEEEE
T ss_pred eEEEECCCCEEEEEECCCCcEEEE
Confidence 577788999999999999998875
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=1.5e-08 Score=80.78 Aligned_cols=260 Identities=8% Similarity=-0.024 Sum_probs=151.8
Q ss_pred CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCC
Q 021291 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 95 (314)
.....+.++++.++|+++++...++.|.+||.. ++... +........+.++++.+ ++..+++...++.|..||..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-
Confidence 345688999999999988888788999999987 55443 32222224589999998 88877777668899999987
Q ss_pred CCCCCCCeeeeecceeeEEEeeeeeccccccccC-CCCcceeeccCCceeeecCCCC-CC---ceeccCCCceEEEeecC
Q 021291 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA-NEPKDCYEREVGETVDTDSLCD-SK---DDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~~ 170 (314)
++.. .+...........+............. ......++.. +.......... .. +++.++++ +++ +...
T Consensus 92 g~~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v-~~~~ 165 (300)
T 2qc5_A 92 GGFT---EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWF-TENQ 165 (300)
T ss_dssp SCEE---EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEE-EETT
T ss_pred CCeE---EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEE-EecC
Confidence 4421 112111111111122211111111111 1222223333 22222222211 11 77888886 444 4444
Q ss_pred cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEe-ee
Q 021291 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA-MK 249 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~-~~ 249 (314)
++.|..||. +++... +..+ . ....+..+. +.++ |. +.++....+.|.+||.. +..... +.
T Consensus 166 ~~~i~~~~~-~g~~~~-~~~~------~----~~~~~~~i~-~d~~---g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~ 226 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEE-YPLP------T----NAAAPVGIT-SGND---GA-LWFVEIMGNKIGRITTT--GEISEYDIP 226 (300)
T ss_dssp TTEEEEECT-TCCEEE-EECS------S----TTCCEEEEE-ECTT---SS-EEEEETTTTEEEEECTT--CCEEEEECS
T ss_pred CCeEEEECC-CCcEEE-eeCC------C----CCCCcceEE-ECCC---CC-EEEEccCCCEEEEEcCC--CcEEEEECC
Confidence 678999998 554432 3210 1 123456676 8876 55 55665567789999983 443322 33
Q ss_pred cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe--------eeeeeecCCCceeceee
Q 021291 250 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF--------GIGFVCDQEGNKFGTTW 306 (314)
Q Consensus 250 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~--------~~~~~~~~~~~~~~~~w 306 (314)
.+...+.+++++++|.+.++...++.|..|+.. ++.... ..++..+++|.++...+
T Consensus 227 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 227 TPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred CCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence 345678999999999877777677899999984 432221 23355667776655543
No 202
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.34 E-value=9.2e-10 Score=87.48 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=110.8
Q ss_pred CCceEEec-CCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 8 PDPVAVLR-GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 8 ~~~~~~l~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
++.+..+. ++...+.+++++++|+++++...++.|.+||.. ++.+..+........+..+++++ +++++++...++
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~ 185 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND--KQEIFISDNRAH 185 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS--SSEEEEEEGGGT
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC--CCCEEEEECCCC
Confidence 34455553 344678999999999988888889999999954 66666664322223489999999 888777778899
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
.|++||.... . ...+....... .+. .++++++|. +++
T Consensus 186 ~i~~~~~~g~-~----~~~~~~~g~~~---~p~---------------------------------~i~~d~~G~-l~v- 222 (286)
T 1q7f_A 186 CVKVFNYEGQ-Y----LRQIGGEGITN---YPI---------------------------------GVGINSNGE-ILI- 222 (286)
T ss_dssp EEEEEETTCC-E----EEEESCTTTSC---SEE---------------------------------EEEECTTCC-EEE-
T ss_pred EEEEEcCCCC-E----EEEEccCCccC---CCc---------------------------------EEEECCCCC-EEE-
Confidence 9999997542 1 11111100000 000 066888885 444
Q ss_pred eecCcC-eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 167 AGEQLS-EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 167 ~g~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
+...++ .|.+||. +++.+..+. .+.. ...+.+++ ++|+ |+ ++++ +.++.|++|+...
T Consensus 223 ~~~~~~~~i~~~~~-~g~~~~~~~--------~~~~--~~~~~~i~-~~~~---g~-l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQ-DGQLISALE--------SKVK--HAQCFDVA-LMDD---GS-VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EECSSSCEEEEECT-TSCEEEEEE--------ESSC--CSCEEEEE-EETT---TE-EEEE-ETTTEEEEEECSC
T ss_pred EeCCCCEEEEEECC-CCCEEEEEc--------ccCC--CCcceeEE-ECCC---Cc-EEEE-CCCCeEEEEEccc
Confidence 344455 9999995 466666665 2211 22356776 9987 65 5555 5789999999875
No 203
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.33 E-value=5e-10 Score=100.27 Aligned_cols=206 Identities=11% Similarity=0.106 Sum_probs=124.8
Q ss_pred CCCCceeEEEEccCCCEEE-----EecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC----
Q 021291 16 GHRASVTDVCFHQTKPILF-----AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG---- 86 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---- 86 (314)
+|...+..++|||||++|| .|+.+..|++||+.+++.+... ... .....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~--~k~~~~~Ws---Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKD--VKFSGISWL---GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEE--EESCCCEEE---TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCC--ceeccEEEe---CCCEEEEEEecCcccc
Confidence 4566788999999999888 3444568999999999865431 111 012466787 346777666663
Q ss_pred ---------eEEEEeCCCCCCCCCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCcee
Q 021291 87 ---------TVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV 156 (314)
Q Consensus 87 ---------~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (314)
.|++|++.+.......++.... ...... . +.|
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~--~------------------------------------~~~ 241 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYV--G------------------------------------ATV 241 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEE--E------------------------------------EEE
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEE--E------------------------------------EEE
Confidence 3888998776432211111111 111000 0 458
Q ss_pred ccCCCceEEEeec--CcCeEEEEecCCCc-eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC---
Q 021291 157 PAEGPKYMAVAGE--QLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED--- 230 (314)
Q Consensus 157 ~~~~~~~~~~~g~--~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d--- 230 (314)
+|+|+.+++.+.. .+..|+++|+.++. ....+. .+.. ..... ++++ |..+++....+
T Consensus 242 SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~--------~~~~----~~~~~--~~~~---g~~l~~~t~~~~~~ 304 (693)
T 3iuj_A 242 TEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ--------GDLD----ADVSL--VDNK---GSTLYLLTNRDAPN 304 (693)
T ss_dssp CTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE--------CSSS----SCEEE--EEEE---TTEEEEEECTTCTT
T ss_pred cCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe--------CCCC----ceEEE--Eecc---CCEEEEEECCCCCC
Confidence 9999987765442 23589999998764 334444 2211 11111 4554 33255555443
Q ss_pred CcEEEEEccCCCCc--eEeeecCCcceEEEEEeCCCCeEEEecCCC---cEEEEecCCCe
Q 021291 231 GSILVWDIRNPGIP--LTAMKVHLEPVLCLSIDESCNGGISGGADQ---KIVLYNLDHST 285 (314)
Q Consensus 231 g~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg---~i~iw~~~~~~ 285 (314)
+.|..+|+.+ +.. ...+..|...+. .|++++..|+....++ .|++|+++.+.
T Consensus 305 ~~l~~~d~~~-~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 305 RRLVTVDAAN-PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp CEEEEEETTS-CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred CEEEEEeCCC-CCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe
Confidence 6799999987 333 355666766665 8888888776665543 68999988554
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=1e-09 Score=88.13 Aligned_cols=236 Identities=8% Similarity=0.001 Sum_probs=133.6
Q ss_pred CceEEecCCCCceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
..+..+...........|+|+|+ ++++...++.|..|+. +++ ...+..+. ..+..+++.+ +++++++...++.
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~--~~~~gl~~d~--dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDAT--AFTNGNAVDA--QQRLVHCEHGRRA 108 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESC--SCEEEEEECT--TSCEEEEETTTTE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCC--CccceeeECC--CCCEEEEECCCCE
Confidence 34555666667788999999998 6778888999999997 454 34444444 3489999999 8886666556688
Q ss_pred EEEEeCCCCCCCCCCeeeeecc----eeeEEEeeeeecccccc---cc-----------CCCCcceeeccC--Cceeeec
Q 021291 88 VKCWDIENGGLSSNPSLTIKTN----SYHFCKLSLVKEPYANA---KQ-----------ANEPKDCYEREV--GETVDTD 147 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~--~~~~~~~ 147 (314)
|.+||.. ++... ....... ......+...+.....- .. ......++.+.. +......
T Consensus 109 v~~~~~~-g~~~~--~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 109 ITRSDAD-GQAHL--LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp EEEECTT-SCEEE--EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EEEECCC-CCEEE--EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 9999986 43211 1111000 01111122111100000 00 001233444433 2211111
Q ss_pred -CCCCCCceeccCCCceEEEeecC-----cCeEEEEecCCCcee--eeecccccCCCCCcCCCCCceeeeEEEecCCCCC
Q 021291 148 -SLCDSKDDVPAEGPKYMAVAGEQ-----LSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (314)
Q Consensus 148 -~~~~~~~~~~~~~~~~~~~~g~~-----d~~i~vwd~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~ 219 (314)
+.....++|+|+++.++++ .+. ++.|.+||+...... ..+.. . ..+....+. ++++
T Consensus 186 ~~~~p~gl~~spdg~~lyv~-~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-------~----~~~~pdgi~-~d~~--- 249 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVS-QTPEQGHGSVEITAFAWRDGALHDRRHFAS-------V----PDGLPDGFC-VDRG--- 249 (305)
T ss_dssp EESSEEEEEECTTSSEEEEE-ECCC---CCCEEEEEEEETTEEEEEEEEEC-------C----SSSCCCSEE-ECTT---
T ss_pred cCCCCcceEEcCCCCEEEEE-ecCCcCCCCCEEEEEEecCCCccCCeEEEE-------C----CCCCCCeEE-ECCC---
Confidence 1111118999999877653 332 268999998754411 11110 0 112233454 7776
Q ss_pred CceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCc
Q 021291 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQK 275 (314)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 275 (314)
|+ |.++..+ .|.+||.. ++.+..+..+. .+.+++|+++++.|..++.++.
T Consensus 250 G~--lwv~~~~-gv~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 250 GW--LWSSSGT-GVCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp SC--EEECCSS-EEEEECTT--SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred CC--EEEecCC-cEEEECCC--CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 65 4444444 49999985 67777776554 5889999998887777766643
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=3.9e-09 Score=85.58 Aligned_cols=225 Identities=11% Similarity=0.047 Sum_probs=129.8
Q ss_pred CceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCC
Q 021291 19 ASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (314)
Q Consensus 19 ~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 97 (314)
.-..+.+|+|+ +.++++...++.|..||..+++.. .+.. . ..+.+++|++ +++++++. .+ .|.+||..+++
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~--~~v~~i~~~~--dg~l~v~~-~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-P--FMGSALAKIS--DSKQLIAS-DD-GLFLRDTATGV 120 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-S--SCEEEEEEEE--TTEEEEEE-TT-EEEEEETTTCC
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-C--CcceEEEEeC--CCeEEEEE-CC-CEEEEECCCCc
Confidence 34567899996 556677778899999999877643 3332 2 3499999999 87766654 44 59999998776
Q ss_pred CCCCCeeeeec----ceeeEEEeeeeeccccccccC-----CCCcceeeccCCceeeecCC---CCCCceeccCCCceEE
Q 021291 98 LSSNPSLTIKT----NSYHFCKLSLVKEPYANAKQA-----NEPKDCYEREVGETVDTDSL---CDSKDDVPAEGPKYMA 165 (314)
Q Consensus 98 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 165 (314)
... ...... .......++..+. ...... .....++.+..+ ....... ....++|+|+++.+++
T Consensus 121 ~~~--~~~~~~~~~~~~~~~i~~d~~G~--l~v~~~~~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 121 LTL--HAELESDLPGNRSNDGRMHPSGA--LWIGTMGRKAETGAGSIYHVAKG-KVTKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEE--EECSSTTCTTEEEEEEEECTTSC--EEEEEEETTCCTTCEEEEEEETT-EEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred EEE--EeeCCCCCCCCCCCCEEECCCCC--EEEEeCCCcCCCCceEEEEEeCC-cEEEeeCCCcccCCeEEcCCCCEEEE
Confidence 321 111110 1111122222211 111110 112344544422 2211111 1112889999987665
Q ss_pred EeecCcCeEEEEecC--CC-cee--eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccC
Q 021291 166 VAGEQLSEVEIWDLN--TA-ERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (314)
Q Consensus 166 ~~g~~d~~i~vwd~~--~~-~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (314)
+.+.++.|.+||+. ++ ... ..+.. . .........+. +.++ |. +.++...++.|.+||..
T Consensus 196 -~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~--------~-~~~~~~p~gi~-~d~~---G~-lwva~~~~~~v~~~d~~- 259 (326)
T 2ghs_A 196 -VDTKVNRLMRVPLDARTGLPTGKAEVFID--------S-TGIKGGMDGSV-CDAE---GH-IWNARWGEGAVDRYDTD- 259 (326)
T ss_dssp -EETTTCEEEEEEBCTTTCCBSSCCEEEEE--------C-TTSSSEEEEEE-ECTT---SC-EEEEEETTTEEEEECTT-
T ss_pred -EECCCCEEEEEEcccccCCcccCceEEEE--------C-CCCCCCCCeeE-ECCC---CC-EEEEEeCCCEEEEECCC-
Confidence 45556899999986 55 321 11210 0 00123445565 7776 55 55555566889999984
Q ss_pred CCCceEeeecCCcceEEEEEe-CCCCeEE-EecCC
Q 021291 241 PGIPLTAMKVHLEPVLCLSID-ESCNGGI-SGGAD 273 (314)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~-~~~~~l~-s~s~d 273 (314)
++.+..+..+...+++++|+ +++..|+ +...+
T Consensus 260 -g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 -GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 67777777777789999998 7876654 44333
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=5.3e-10 Score=91.42 Aligned_cols=242 Identities=10% Similarity=-0.042 Sum_probs=138.0
Q ss_pred CceeEEEEccCCCEEEEec--CCCeEEEEeCCCCeEEEEEec-----cCCcccEEEEEEcccCCCCeEEEeec-----CC
Q 021291 19 ASVTDVCFHQTKPILFAGT--TGGELRIWDTVQHRTVSSSWV-----HSAAHGIVSVATGPSIGLNKVISQGR-----DG 86 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~s~~~-----dg 86 (314)
..+..++++++|+++++.. .++.++||.+.+++.. .+.. ..+...+..+++.+ +++++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~--~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG--NGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS--SSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC--CCcEEEEcCCCCcCCCC
Confidence 6889999999999988864 2343556655555432 2211 11124589999999 8665554433 57
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCC-CCceeccCCCceEE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD-SKDDVPAEGPKYMA 165 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 165 (314)
.|.+||+.+++... .+.+...... ...+ .++++++++..+++
T Consensus 94 ~i~~~d~~tg~~~~--~~~~~~~~~~-----------------------------------~~~~~~~v~vd~~~g~~yv 136 (343)
T 2qe8_A 94 KLVAWDTLNNQLSR--VIYLPPPITL-----------------------------------SNSFVNDLAVDLIHNFVYI 136 (343)
T ss_dssp EEEEEETTTTEEEE--EEECCTTTSC-----------------------------------TTCCCCEEEEETTTTEEEE
T ss_pred eEEEEECCCCeEEE--EEECChhhcc-----------------------------------cccccceEEEecCCCEEEE
Confidence 89999999876422 1111100000 0000 01567776555555
Q ss_pred Eeec---CcCeEEEEecCCCceeeeecccccC-C-C-----CCcC----CC------CCceeeeEEEecCCCCCCceEEE
Q 021291 166 VAGE---QLSEVEIWDLNTAERCTRLHQNSCG-G-S-----PNFS----SK------GRGMCMAVQAYLPSKSQGFVNVL 225 (314)
Q Consensus 166 ~~g~---~d~~i~vwd~~~~~~~~~~~~~~~~-~-~-----~~h~----~~------~~~~~~~~~~~~p~~~~g~~~l~ 225 (314)
+.. .++.|.+||+.+++....+...... . . .+.. .. .......++ |+|+ |+ .|+
T Consensus 137 -td~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~d---g~-~ly 210 (343)
T 2qe8_A 137 -SDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAE---NE-WLY 210 (343)
T ss_dssp -EECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTT---SC-EEE
T ss_pred -EcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccC---CC-EEE
Confidence 443 5689999999888765554310000 0 0 0000 00 011246676 9997 55 566
Q ss_pred EeecCC-cEEEEEccC--CCC-----ceE--eeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe------
Q 021291 226 AGYEDG-SILVWDIRN--PGI-----PLT--AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF------ 289 (314)
Q Consensus 226 ~g~~dg-~i~vwd~~~--~~~-----~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~------ 289 (314)
.+..++ .|..++... .+. ... ...++......++++++|.++++...++.|.+||.++++....
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~ 290 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKL 290 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGG
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCce
Confidence 655554 555555321 011 000 1123344567799999999999998999999999855543221
Q ss_pred --eeeeeecCCCceeceee
Q 021291 290 --GIGFVCDQEGNKFGTTW 306 (314)
Q Consensus 290 --~~~~~~~~~~~~~~~~w 306 (314)
..++++++++..+.+..
T Consensus 291 ~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 291 SWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp SCEEEEEECTTSCEEEEEC
T ss_pred ecCCeeEECCCCcEEEEeC
Confidence 34566777887776654
No 207
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.30 E-value=3.8e-09 Score=81.92 Aligned_cols=210 Identities=8% Similarity=-0.005 Sum_probs=139.3
Q ss_pred CceEEecCCCCc--eeEEEEccCCCEEEEecC--CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 9 DPVAVLRGHRAS--VTDVCFHQTKPILFAGTT--GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 9 ~~~~~l~~h~~~--v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
+.+.++. |... ...++|++++.++++.+. ++.|++.|+.+++.+..+..... .....+++.. + ...++.-.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g--~-~lyv~t~~ 84 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLN--E-KLYQVVWL 84 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEET--T-EEEEEETT
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeC--C-EEEEEEec
Confidence 4456664 5543 579999998755555443 67999999999999988764332 1234566654 2 44445556
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecc-eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCce
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (314)
++.+.++|..+.+.+. ++... +.. ..++++|+.+
T Consensus 85 ~~~v~viD~~t~~v~~----~i~~g~~~g-----------------------------------------~glt~Dg~~l 119 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIK----NFTHQMKDG-----------------------------------------WGLATDGKIL 119 (266)
T ss_dssp CSEEEEEETTTTEEEE----EEECCSSSC-----------------------------------------CEEEECSSSE
T ss_pred CCEEEEEECCCCcEEE----EEECCCCCe-----------------------------------------EEEEECCCEE
Confidence 8899999999876533 22211 100 3366788888
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
+++.+ ++.|.++|..+.+.+..+.. +.....-.....+. |. + |+ +.+....++.|.+.|..+ ++
T Consensus 120 ~vs~g--s~~l~viD~~t~~v~~~I~V-------g~~~~p~~~~nele-~~-d---g~-lyvn~~~~~~V~vID~~t-g~ 183 (266)
T 2iwa_A 120 YGSDG--TSILYEIDPHTFKLIKKHNV-------KYNGHRVIRLNELE-YI-N---GE-VWANIWQTDCIARISAKD-GT 183 (266)
T ss_dssp EEECS--SSEEEEECTTTCCEEEEEEC-------EETTEECCCEEEEE-EE-T---TE-EEEEETTSSEEEEEETTT-CC
T ss_pred EEECC--CCeEEEEECCCCcEEEEEEE-------CCCCcccccceeEE-EE-C---CE-EEEecCCCCeEEEEECCC-Cc
Confidence 86443 68999999999988887763 11000011234454 66 3 54 555555678999999998 88
Q ss_pred ceEeeecC-------------CcceEEEEEeCCCC-eEEEecCCCcEEEEecCCC
Q 021291 244 PLTAMKVH-------------LEPVLCLSIDESCN-GGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 244 ~~~~~~~h-------------~~~v~~~~~~~~~~-~l~s~s~dg~i~iw~~~~~ 284 (314)
.+..+... ....+.|+|+++++ +++++...+.|.+.++...
T Consensus 184 V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 184 LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 88877631 13568999999875 5677778889999888654
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=1.6e-09 Score=97.14 Aligned_cols=230 Identities=11% Similarity=-0.026 Sum_probs=128.7
Q ss_pred ccCCCEEEEecCCC-----eEEEEeCCCCeEEEEEecc----CCcccEEEEEEcccCCCCeEE-----EeecCCeEEEEe
Q 021291 27 HQTKPILFAGTTGG-----ELRIWDTVQHRTVSSSWVH----SAAHGIVSVATGPSIGLNKVI-----SQGRDGTVKCWD 92 (314)
Q Consensus 27 ~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~-----s~~~dg~v~iwd 92 (314)
+|+|++++....++ .|.+.+...++....+... .+...+..++|+| ||++|+ .|+.+.+|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW--DGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT--TSSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC--CCCEEEEEECCCCCceEEEEEEE
Confidence 37888877655433 3455555455443333211 1113589999999 999988 444567899999
Q ss_pred CCCCCCC-CCCeeeeecceeeEEEeeeeeccccccccCCC------------CcceeeccCCc---eeeecCCCCCC---
Q 021291 93 IENGGLS-SNPSLTIKTNSYHFCKLSLVKEPYANAKQANE------------PKDCYEREVGE---TVDTDSLCDSK--- 153 (314)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~---~~~~~~~~~~~--- 153 (314)
+.+++.. .. .+.........+++.+........... ....+++.... ........+..
T Consensus 154 l~tg~~~~~~---~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 154 VDSGEWSKVD---VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp TTTCCBCSSC---CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred CCCCCCcCCc---ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 9998764 21 111111122334443332222222111 13344554433 23333333332
Q ss_pred -ceeccCCCceEEEeecC--cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee--
Q 021291 154 -DDVPAEGPKYMAVAGEQ--LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-- 228 (314)
Q Consensus 154 -~~~~~~~~~~~~~~g~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~-- 228 (314)
.+|+|+|+.+++.+... ...|.+||..+++. ..+. .+.. ...... + |+ |. +++...
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~--------~~~~----~~~~~~-~-~~---g~-l~~~s~~~ 291 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLV--------KGVG----AKYEVH-A-WK---DR-FYVLTDEG 291 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEE--------ECSS----CCEEEE-E-ET---TE-EEEEECTT
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEee--------cCCC----ceEEEE-e-cC---Cc-EEEEECCC
Confidence 88999998877654432 22677777655543 3333 1211 223332 4 44 55 555554
Q ss_pred -cCCcEEEEEccCCCCc--eEeeecC--CcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 229 -EDGSILVWDIRNPGIP--LTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 229 -~dg~i~vwd~~~~~~~--~~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
.++.|.+||+.+ +.. ...+..+ ...+..++|+ ++.++++...|+..++|.++
T Consensus 292 ~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 292 APRQRVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CTTCEEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 358899999986 432 2344433 4468889998 66788999999998888665
No 209
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=1.1e-09 Score=89.69 Aligned_cols=258 Identities=7% Similarity=-0.071 Sum_probs=145.4
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeccCCc-----ccEEEEEEcc
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSAA-----HGIVSVATGP 72 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~ 72 (314)
.+.+.++..-..+ .++++||+++++++. .++.|.+||+.+++.+.++...... .....++++|
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp 133 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA 133 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC
Confidence 3455555533445 799999999888875 4789999999999999998754100 1246899999
Q ss_pred cCCCCeEEEeec--CCeEEE--EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC----Ccee
Q 021291 73 SIGLNKVISQGR--DGTVKC--WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV----GETV 144 (314)
Q Consensus 73 ~~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 144 (314)
|+++++.+.. +..|.+ +|..+ .. .+..... ..+.+............+.....++.. ....
T Consensus 134 --DGk~lyVan~~~~~~v~V~~iD~~t---v~----~i~v~~~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 134 --SSACLLFFLFGSSAAAGLSVPGASD---DQ----LTKSASC--FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp --TSSCEEEEECSSSCEEEEEETTTEE---EE----EEECSSC--CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred --CCCEEEEEccCCCCeEEEEEEchhh---ce----EEECCCc--eEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 9999998875 467888 99876 11 1111100 001122211111222222333334433 1111
Q ss_pred ee----cCC-CCCCceeccCCCceEEEeecCcCeEEEEecCCCc--eeeeecccccCCCCCcCCCCCceeeeEEEecCCC
Q 021291 145 DT----DSL-CDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (314)
Q Consensus 145 ~~----~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~ 217 (314)
.. ... +..... .+++..++.+ .. +.|.+.|+.... .+..+..... ....+.. .......+. |+|+
T Consensus 203 ~~~~t~~i~vg~~P~~-~~~~~~~~~v-s~--~~V~viD~~~~~~~v~~~~~~~~~-~~~~~~~-~p~g~~~v~-~s~d- 274 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQ-ANYPGMLVWA-VA--SSILQGDIPAAGATMKAAIDGNES-GRKADNF-RSAGFQMVA-KLKN- 274 (368)
T ss_dssp CCCSCTTSCBCSCCEE-ETTTTEEEEC-BS--SCCEEEECCSSCCEEECCCCSSCT-HHHHTTE-EECSSSCEE-EETT-
T ss_pred EEEeeeeeeCCCCccc-cccCCEEEEE-cC--CEEEEEECCCCcceEEEEEEeccc-ccccccc-ccCcceeeE-EcCC-
Confidence 10 000 000123 5666655543 33 789999986543 2222211000 0000000 000011144 8988
Q ss_pred CCCceEEEEee---c-----CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCe-EEEec-CCCcEEEEecCCCeee
Q 021291 218 SQGFVNVLAGY---E-----DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGG-ADQKIVLYNLDHSTYV 287 (314)
Q Consensus 218 ~~g~~~l~~g~---~-----dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s-~dg~i~iw~~~~~~~~ 287 (314)
++.++++.. . ++.+.++|+.+ .+.+..+.... ....|+|++++++ +++.. .++.|.++|+.+++.+
T Consensus 275 --g~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 275 --TDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp --TTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred --CCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 442333333 1 23566999998 77788777533 6789999999974 56666 5999999999999988
Q ss_pred Eee
Q 021291 288 LFG 290 (314)
Q Consensus 288 ~~~ 290 (314)
..+
T Consensus 351 ~~I 353 (368)
T 1mda_H 351 SSV 353 (368)
T ss_dssp EEC
T ss_pred EEE
Confidence 764
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.29 E-value=2.9e-08 Score=79.08 Aligned_cols=236 Identities=7% Similarity=-0.040 Sum_probs=136.0
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
+...+.+++++++|+++++...++.|..||.. ++. ..+........+.++++.+ ++.++++...++.|..||. ++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGP--NGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-TC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECC--CCCEEEEecCCceEEEECC-CC
Confidence 45678999999999988888778899999976 433 3333221224589999999 8887777777889999998 44
Q ss_pred CCCCCCeeeeecceeeEEEeeeeecccccccc-CCCCcceeeccCCceeeecCCCCC-C---ceeccCCCceEEEeecCc
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDS-K---DDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~d 171 (314)
+.. .+...........+............ .......++. .+........... . +++.++|. +++ +...+
T Consensus 130 ~~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~~~~ 203 (299)
T 2z2n_A 130 KIR---EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWF-VEIIG 203 (299)
T ss_dssp CEE---EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEE-EETTT
T ss_pred CEE---EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEE-EccCC
Confidence 321 11111111111111111111111111 1122333333 2222222122111 1 78888876 444 34446
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEee--e
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM--K 249 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~--~ 249 (314)
+.|.+||. +++.. .+... . ....+.++. ++|+ |+ +.++...++.|..||.. +.. ..+ .
T Consensus 204 ~~i~~~~~-~g~~~-~~~~~------~----~~~~~~~i~-~~~~---g~-l~v~~~~~~~i~~~d~~--g~~-~~~~~~ 263 (299)
T 2z2n_A 204 NKIGRITT-SGEIT-EFKIP------T----PNARPHAIT-AGAG---ID-LWFTEWGANKIGRLTSN--NII-EEYPIQ 263 (299)
T ss_dssp TEEEEECT-TCCEE-EEECS------S----TTCCEEEEE-ECST---TC-EEEEETTTTEEEEEETT--TEE-EEEECS
T ss_pred ceEEEECC-CCcEE-EEECC------C----CCCCceeEE-ECCC---CC-EEEeccCCceEEEECCC--Cce-EEEeCC
Confidence 88999998 66533 23210 1 123566776 8887 55 55555567899999984 432 233 3
Q ss_pred cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 250 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 250 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
.+...+.++++ +++.++++.+ .+.|..++.++++
T Consensus 264 ~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 264 IKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp SSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred CCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 44567899999 8888766655 5667777776543
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.28 E-value=9e-09 Score=84.90 Aligned_cols=122 Identities=7% Similarity=-0.094 Sum_probs=79.4
Q ss_pred EEccCCCEEEEecC--CC---eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee----------cCCeEE
Q 021291 25 CFHQTKPILFAGTT--GG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVK 89 (314)
Q Consensus 25 ~~~~~~~~l~s~~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~v~ 89 (314)
...|+++++++... .. .|.++|..+++.+..+.... .+ .++++| |+++++.+. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~--~p--~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF--LP--NPVAAH--SGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC--CC--CeEECC--CCCEEEEEeccccccccCCCCCeEE
Confidence 34468887776653 22 88999999999887776433 23 999999 999999876 367899
Q ss_pred EEeCCCCCCCCCCeeeeecc-eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEee
Q 021291 90 CWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (314)
+||..+.+.+. .+... ...... ......++|+|+|++++++..
T Consensus 101 viD~~t~~~~~----~i~~~~~~~~~~--------------------------------g~~p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 101 VFDPVTFLPIA----DIELPDAPRFDV--------------------------------GPYSWMNANTPNNADLLFFQF 144 (373)
T ss_pred EEECCCCcEEE----EEECCCcccccc--------------------------------CCCccceEECCCCCEEEEEec
Confidence 99998765433 21111 000000 000001678899988776432
Q ss_pred cCcCeEEEEecCCCceeee-ec
Q 021291 169 EQLSEVEIWDLNTAERCTR-LH 189 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~~~~-~~ 189 (314)
..++.|.++| .+++.+.. +.
T Consensus 145 ~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 145 AAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred CCCCeEEEEE-CCCCEEeEEcC
Confidence 2257899999 88887776 54
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.27 E-value=8.7e-10 Score=90.19 Aligned_cols=199 Identities=11% Similarity=0.000 Sum_probs=129.5
Q ss_pred EEEccCCCEEEEecC-----CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee----------cCCeE
Q 021291 24 VCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTV 88 (314)
Q Consensus 24 ~~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~v 88 (314)
....|+++.++.... ++.|.+.|..+++.+..+..... + . ++++| |+++++.++ .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~--P-~-va~sp--DG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--P-N-PVVAD--DGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--C-E-EEECT--TSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC--C-c-EEECC--CCCEEEEEcccccccccCCCCCEE
Confidence 445688888877654 68999999999999998876543 3 3 99999 999888775 36789
Q ss_pred EEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC-ceeccCCCceEEEe
Q 021291 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-DDVPAEGPKYMAVA 167 (314)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 167 (314)
.+||..+.+.+. ++....... ... ..+.. ++++|||++++++.
T Consensus 112 sviD~~t~~v~~----~I~v~~g~r--~~~------------------------------g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 112 EVFDPVTLLPTA----DIELPDAPR--FLV------------------------------GTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp EEECTTTCCEEE----EEEETTCCC--CCB------------------------------SCCGGGEEECTTSSEEEEEE
T ss_pred EEEECCCCeEEE----EEECCCccc--ccc------------------------------CCCCceEEEcCCCCEEEEEE
Confidence 999999886533 221110000 000 00000 67999999887643
Q ss_pred ecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEe
Q 021291 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (314)
Q Consensus 168 g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~ 247 (314)
...++.|.++|+.+++.+.++.. .+ + .. ..|.+ .+ .+++.+.||.+.+.++...++....
T Consensus 156 ~~~~~~VsVID~~t~~vv~tI~v-------------~g-~--~~-~~P~g--~~-~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 156 FSPAPAVGVVDLEGKAFKRMLDV-------------PD-C--YH-IFPTA--PD-TFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp CSSSCEEEEEETTTTEEEEEEEC-------------CS-E--EE-EEEEE--TT-EEEEEETTSCEEEEECCSSSCCEEE
T ss_pred cCCCCeEEEEECCCCcEEEEEEC-------------CC-c--ce-eecCC--Cc-eeEEECCCCCEEEEECCCCCeEEEe
Confidence 33368999999999999888872 11 1 11 33432 22 6778888999999998753444322
Q ss_pred eecC----CcceE-EEEEe-CCCCeEEEecCCCcEEEEecCCCe
Q 021291 248 MKVH----LEPVL-CLSID-ESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 248 ~~~h----~~~v~-~~~~~-~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
...+ ..++. ...|. ++|++++ .+.+|.|.+.|+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 2111 12222 24664 6776554 4558999999997654
No 213
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.24 E-value=2e-09 Score=86.08 Aligned_cols=188 Identities=16% Similarity=0.075 Sum_probs=116.3
Q ss_pred EEEEEeccCCcccEEEEEEcccCCCC-eEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCC
Q 021291 52 TVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (314)
Q Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (314)
.+..+..+. ....+++|+| +++ +++++..++.|..||..++ . . .+...... ...
T Consensus 19 ~~~~l~~~~--~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~-~-~--~~~~~~~~-~~~---------------- 73 (296)
T 3e5z_A 19 EARRLADGF--TWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ-L-S--PEMHPSHH-QNG---------------- 73 (296)
T ss_dssp CCEEEECCC--SSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC-E-E--EEESSCSS-EEE----------------
T ss_pred cEEEEecCC--ccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC-e-E--EEECCCCC-cce----------------
Confidence 334444444 3478999999 887 7778888999999999875 2 1 11111110 000
Q ss_pred CCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeE
Q 021291 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV 210 (314)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 210 (314)
++++++|. +++ +...++.|.+||..+++...... .........+..+
T Consensus 74 -----------------------l~~~~dg~-l~v-~~~~~~~i~~~d~~~g~~~~~~~--------~~~~~~~~~~~~i 120 (296)
T 3e5z_A 74 -----------------------HCLNKQGH-LIA-CSHGLRRLERQREPGGEWESIAD--------SFEGKKLNSPNDV 120 (296)
T ss_dssp -----------------------EEECTTCC-EEE-EETTTTEEEEECSTTCCEEEEEC--------EETTEECCCCCCE
T ss_pred -----------------------eeECCCCc-EEE-EecCCCeEEEEcCCCCcEEEEee--------ccCCCCCCCCCCE
Confidence 56888886 443 44446889999998877543322 1111111234556
Q ss_pred EEecCCCCCCceEEEE----eec-------------CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCC
Q 021291 211 QAYLPSKSQGFVNVLA----GYE-------------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 273 (314)
Q Consensus 211 ~~~~p~~~~g~~~l~~----g~~-------------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 273 (314)
. ++|+ |+ ++++ |.. .+.|..++.. + .+..+..+......++|+|+++.|++.+.+
T Consensus 121 ~-~d~~---G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g-~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 121 C-LAPD---GS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--G-TLSAPIRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp E-ECTT---SC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--S-CEEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred E-ECCC---CC-EEEECCccccccccccccccccCCCcEEEEECCC--C-CEEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence 6 8887 65 5665 331 2345555543 3 344455566778999999999988888888
Q ss_pred CcEEEEecC-CCee---eEe-------eeeeeecCCCceecee
Q 021291 274 QKIVLYNLD-HSTY---VLF-------GIGFVCDQEGNKFGTT 305 (314)
Q Consensus 274 g~i~iw~~~-~~~~---~~~-------~~~~~~~~~~~~~~~~ 305 (314)
+.|.+|+++ .++. ... ..++.++++|.++.+.
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 999999997 4433 111 1356777887766543
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=1.1e-08 Score=85.59 Aligned_cols=207 Identities=9% Similarity=-0.006 Sum_probs=129.9
Q ss_pred EEEccCCCEEEEecCCC--eEEEEeCCCCeEEEEE---ec-cCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCC
Q 021291 24 VCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSS---WV-HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (314)
Q Consensus 24 ~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 97 (314)
++|+++++.|+++..++ .|.+|+...+.....+ .. .. ..+.+++++| +...|+.+..++.|..||..++.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~--~~p~~iav~p--~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS--GKIGAVALDE--TEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC--SCCCBCEECT--TSSEEEEECTTCEEEEEETTTCC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc--CCcEEEEEeC--CCCeEEEEECCCcEEEEECCCCC
Confidence 89999999888888766 7999998765544333 11 22 4478999999 66777777778999999998764
Q ss_pred CCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEE
Q 021291 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIW 177 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vw 177 (314)
.. .+........ ....+. ..++|+|++..+++ +...++.|+.|
T Consensus 252 ~~---~~~~~~~~g~-~~~~P~--------------------------------~~ia~~p~~g~lyv-~d~~~~~I~~~ 294 (409)
T 3hrp_A 252 VT---LIKQLELSGS-LGTNPG--------------------------------PYLIYYFVDSNFYM-SDQNLSSVYKI 294 (409)
T ss_dssp EE---EEEECCCCSC-CCCSSC--------------------------------CEEEEETTTTEEEE-EETTTTEEEEE
T ss_pred EE---EEecccccCC-CCCCcc--------------------------------ccEEEeCCCCEEEE-EeCCCCEEEEE
Confidence 21 1000000000 000000 01678997666665 45557899999
Q ss_pred ecCCCceeeeecccccCCCCCcCC-----CCCceeeeEEEecCCCCCCceEEEEee-cCCcEEEEEccCCCCceEeeecC
Q 021291 178 DLNTAERCTRLHQNSCGGSPNFSS-----KGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIPLTAMKVH 251 (314)
Q Consensus 178 d~~~~~~~~~~~~~~~~~~~~h~~-----~~~~~~~~~~~~~p~~~~g~~~l~~g~-~dg~i~vwd~~~~~~~~~~~~~h 251 (314)
|.... ...+.... ...+... ..-.....++ ++|+ |+ ++++-. .++.|+.||+.+ +. +..+.++
T Consensus 295 ~~~g~--~~~~~g~~--~~~g~~dg~~~~~~~~~P~gia-~d~d---G~-lyvad~~~~~~I~~~~~~~-G~-v~~~~g~ 363 (409)
T 3hrp_A 295 TPDGE--CEWFCGSA--TQKTVQDGLREEALFAQPNGMT-VDED---GN-FYIVDGFKGYCLRKLDILD-GY-VSTVAGQ 363 (409)
T ss_dssp CTTCC--EEEEEECT--TCCSCBCEEGGGCBCSSEEEEE-ECTT---CC-EEEEETTTTCEEEEEETTT-TE-EEEEEEC
T ss_pred ecCCC--EEEEEeCC--CCCCcCCCcccccEeCCCeEEE-EeCC---CC-EEEEeCCCCCEEEEEECCC-CE-EEEEeCC
Confidence 97643 22232100 0001100 0012356776 9987 66 777777 889999999765 44 4445444
Q ss_pred ---------------CcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 252 ---------------LEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 252 ---------------~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
-.....|++++++.++++-..++.|+.++++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 2357899999999888888888899888763
No 215
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=1.5e-08 Score=77.66 Aligned_cols=195 Identities=10% Similarity=0.088 Sum_probs=125.6
Q ss_pred ceEEecCCCCce--eEEEEccCCCEEEEecCCC--eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-Eeec
Q 021291 10 PVAVLRGHRASV--TDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGR 84 (314)
Q Consensus 10 ~~~~l~~h~~~v--~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~ 84 (314)
.++++ .|...- ..+.|+ ++.++.+.+.+| .|+++|+++++.+..+...... .-..+++.. +.|+ ..-.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g----~~ly~ltw~ 105 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-FGEGISDWK----DKIVGLTWK 105 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-CEEEEEEET----TEEEEEESS
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-ceeEEEEeC----CEEEEEEee
Confidence 45555 455443 789998 677777777766 8999999999999888754321 123355533 4444 4445
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
++.+.+||..+.+.+. ++...... ..++++++.++
T Consensus 106 ~~~v~v~D~~t~~~~~----ti~~~~eG-----------------------------------------~glt~dg~~L~ 140 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVR----SFNYDGEG-----------------------------------------WGLTHNDQYLI 140 (262)
T ss_dssp SSEEEEEETTTCCEEE----EEECSSCC-----------------------------------------CCEEECSSCEE
T ss_pred CCEEEEEECccCcEEE----EEECCCCc-----------------------------------------eEEecCCCEEE
Confidence 8899999999987544 22221100 23557777777
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
++.| ++.|.++|..+.+.+.++.... ... .-..+..+. |. + |+ +.+....+..|.+.|.++ ++.
T Consensus 141 ~SdG--s~~i~~iDp~T~~v~~~I~V~~------~g~-~~~~lNELe-~~-~---G~-lyan~w~~~~I~vIDp~t-G~V 204 (262)
T 3nol_A 141 MSDG--TPVLRFLDPESLTPVRTITVTA------HGE-ELPELNELE-WV-D---GE-IFANVWQTNKIVRIDPET-GKV 204 (262)
T ss_dssp ECCS--SSEEEEECTTTCSEEEEEECEE------TTE-ECCCEEEEE-EE-T---TE-EEEEETTSSEEEEECTTT-CBE
T ss_pred EECC--CCeEEEEcCCCCeEEEEEEecc------CCc-cccccceeE-EE-C---CE-EEEEEccCCeEEEEECCC-CcE
Confidence 6443 5789999999999888876310 000 001222344 54 3 54 555566788999999998 888
Q ss_pred eEeeecC------------CcceEEEEEeCCCCeEEEecC
Q 021291 245 LTAMKVH------------LEPVLCLSIDESCNGGISGGA 272 (314)
Q Consensus 245 ~~~~~~h------------~~~v~~~~~~~~~~~l~s~s~ 272 (314)
+..+... .+..+.|+|+|++..|+..+.
T Consensus 205 ~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 205 TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7776632 135688999998776655543
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.16 E-value=1.2e-08 Score=92.10 Aligned_cols=231 Identities=12% Similarity=-0.041 Sum_probs=123.5
Q ss_pred ccCCCEEEEecCCCe---EEEE--eCC---CCeEEEEEec----cCCcccEEEEEEcccCCCCeEEEeecC-----CeEE
Q 021291 27 HQTKPILFAGTTGGE---LRIW--DTV---QHRTVSSSWV----HSAAHGIVSVATGPSIGLNKVISQGRD-----GTVK 89 (314)
Q Consensus 27 ~~~~~~l~s~~~dg~---v~iw--d~~---~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~ 89 (314)
+|+|++++....++. -.+| +.. .++....+.. ..+...+..++|+| ||++|+.++.+ .+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SP--DG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASD--DGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECT--TSSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECC--CCCEEEEEEcCCCCceEEEE
Confidence 378988776544332 3444 443 3333322211 11112488999999 99999876553 3699
Q ss_pred EEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCC-----------C--cceeeccCCc---eeeecCCCCCC
Q 021291 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE-----------P--KDCYEREVGE---TVDTDSLCDSK 153 (314)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~---~~~~~~~~~~~ 153 (314)
+||+.+++... . ...........+++. ........... . ...+++.... ........+..
T Consensus 193 v~dl~tg~~~~--~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 193 FVGVADGKPLA--D-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EEETTTCCEEE--E-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EEECCCCCCCC--c-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 99999987532 1 111111112223333 22222221111 1 2233443332 22222333322
Q ss_pred ----ceeccCCCceEEEeec---CcCeEEEEecCCC--ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEE
Q 021291 154 ----DDVPAEGPKYMAVAGE---QLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (314)
Q Consensus 154 ----~~~~~~~~~~~~~~g~---~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l 224 (314)
..|+|+|+.+++.+.. .+..|++||+.++ +....+. .+.. ..... ++|+ |. .|
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~----~~~~~--~~~d---g~-~l 330 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--------PDLK----AQWDF--VDGV---GD-QL 330 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--------CSSS----SCEEE--EEEE---TT-EE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--------CCCC----ceEEE--Eecc---CC-EE
Confidence 7899999987765543 1358999999876 3134444 2211 12222 3466 44 44
Q ss_pred EEeec----CCcEEEEEccCCC-CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 225 LAGYE----DGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 225 ~~g~~----dg~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
+..+. ++.|.+||+.++. .....+..+...+..++++ ++.++++...|+..+||.++
T Consensus 331 ~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 331 WFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 44443 4569999988631 2333344445567778888 55678888899988877654
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=2.2e-08 Score=83.35 Aligned_cols=120 Identities=9% Similarity=-0.041 Sum_probs=81.9
Q ss_pred cCCCEEEEecC-C----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee----------cCCeEEEEe
Q 021291 28 QTKPILFAGTT-G----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (314)
Q Consensus 28 ~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~v~iwd 92 (314)
++++.++.... + +.|.++|..+++.+.++..-. .+ .++++| |+++++.+. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~--~P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF--LP--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS--SC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC--CC--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 36665555443 2 699999999999999987654 34 899999 999888776 467899999
Q ss_pred CCCCCCCCCCeeeeecc-eeeE-EEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC
Q 021291 93 IENGGLSSNPSLTIKTN-SYHF-CKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (314)
..+.+.+. ++... .... ....+. .+.++|+|++++++....
T Consensus 156 ~~t~~vv~----~I~v~g~~r~~~g~~P~---------------------------------~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 156 PVTFLPIA----DIELPDAPRFLVGTYQW---------------------------------MNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp TTTCCEEE----EEEETTCCCCCBSCCGG---------------------------------GSEECTTSSEEEEEECSS
T ss_pred CCCCcEEE----EEECCCccccccCCCcc---------------------------------eEEEcCCCCEEEEEecCC
Confidence 99886543 22110 0000 000000 067999999887643333
Q ss_pred cCeEEEEecCCCceeeeecc
Q 021291 171 LSEVEIWDLNTAERCTRLHQ 190 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~ 190 (314)
++.|.+.|+.+++.+.++..
T Consensus 199 ~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp SCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEEEc
Confidence 57899999999988877763
No 218
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.14 E-value=2.3e-08 Score=78.49 Aligned_cols=216 Identities=10% Similarity=-0.007 Sum_probs=120.6
Q ss_pred cEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCC
Q 021291 64 GIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (314)
...++++++ ++++++ +...++.|.+||..+..... ..... .......+... ..............++....
T Consensus 25 ~p~~i~~~~--~g~l~v~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~--g~l~v~~~~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDS--AGNVYVTSEGMYGRVVKLATGSTGTTV---LPFNGLYQPQGLAVDGA--GTVYVTDFNNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECT--TCCEEEEECSSSCEEEEECC-----EE---CCCCSCCSCCCEEECTT--CCEEEEETTTEEEEECTTCS
T ss_pred CccceEECC--CCCEEEEccCCCCcEEEecCCCcccce---EeeCCcCCcceeEECCC--CCEEEEcCCCEEEEEeCCCc
Confidence 478999999 888776 54778899999986653211 00110 11111112111 11111111222233333322
Q ss_pred ceeeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCC
Q 021291 142 ETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (314)
Q Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~ 218 (314)
............ ++++++|. +++ +...++.|.+|+..+........ .. ......+. ++|+
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~-l~v-~~~~~~~i~~~~~~~~~~~~~~~--------~~----~~~p~~i~-~~~~-- 160 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGA-VYV-ADRGNNRVVKLAAGSKTQTVLPF--------TG----LNDPDGVA-VDNS-- 160 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCC-EEE-EEGGGTEEEEECTTCCSCEECCC--------CS----CCSCCCEE-ECTT--
T ss_pred eEeeeecCCcCCCcceEECCCCC-EEE-EECCCCEEEEEECCCceeEeecc--------cc----CCCceeEE-EeCC--
Confidence 221111111122 88889886 444 44446889999866544322111 11 12345565 8886
Q ss_pred CCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE-------eee
Q 021291 219 QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL-------FGI 291 (314)
Q Consensus 219 ~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~-------~~~ 291 (314)
|+ ++++...++.|.+||... .........+...+.+++++++|.++++...++.|.+|+.+...... ...
T Consensus 161 -g~-l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 161 -GN-VYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPL 237 (270)
T ss_dssp -CC-EEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEE
T ss_pred -CC-EEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCce
Confidence 55 667766788999999875 43333223333678999999999877887788899999987654332 134
Q ss_pred eeeecCCCceeceee
Q 021291 292 GFVCDQEGNKFGTTW 306 (314)
Q Consensus 292 ~~~~~~~~~~~~~~w 306 (314)
++.++++|.++.+.+
T Consensus 238 ~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 238 AVAVDSDRTVYVADR 252 (270)
T ss_dssp EEEECTTCCEEEEEG
T ss_pred eEEECCCCCEEEEEC
Confidence 567778887766644
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.13 E-value=9e-10 Score=90.41 Aligned_cols=149 Identities=7% Similarity=0.014 Sum_probs=99.6
Q ss_pred cEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCC--C-----CCCeeeeecceeeEEEeeeeeccccccccCCCCccee
Q 021291 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL--S-----SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCY 136 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (314)
++..+++++ ...++++|+.+ .+.+|++..... . .++..........
T Consensus 39 ~~nlLais~--~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~------------------------ 91 (388)
T 1xip_A 39 SLQNLDISN--SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVI------------------------ 91 (388)
T ss_dssp CCBCEEEET--TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEE------------------------
T ss_pred cccEEEEcC--CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCCee------------------------
Confidence 489999999 88999999987 566698754320 0 0000011100000
Q ss_pred eccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCC
Q 021291 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS 216 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~ 216 (314)
.++| ++..++ + + .++.|++||+++........ .|. ..+.++. +.+.
T Consensus 92 ----------------~l~f--d~~~L~-v-~-~~~~l~v~dv~sl~~~~~~~--------~~~----~~v~~i~-~~~p 137 (388)
T 1xip_A 92 ----------------FVCF--HGDQVL-V-S-TRNALYSLDLEELSEFRTVT--------SFE----KPVFQLK-NVNN 137 (388)
T ss_dssp ----------------EEEE--ETTEEE-E-E-ESSEEEEEESSSTTCEEEEE--------ECS----SCEEEEE-ECSS
T ss_pred ----------------EEEE--CCCEEE-E-E-cCCcEEEEEchhhhccCccc--------eee----cceeeEE-ecCC
Confidence 0557 665444 3 3 57999999998776554444 332 2345555 4443
Q ss_pred CCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 217 KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 217 ~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.++++..||.|.+||+.+ +.... +...|++++|+|+| ++.|..||.+++|+.+..+.
T Consensus 138 ------~~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 138 ------TLVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp ------EEEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred ------CEEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 488889999999999997 54432 45689999999999 57888999999998887663
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=3.1e-07 Score=73.08 Aligned_cols=234 Identities=9% Similarity=-0.037 Sum_probs=133.1
Q ss_pred CCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 17 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
+...+.++++.++|+++++...++.|..||.. ++.. .+........+.++++.+ ++.++++...++.|..||.. +
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECS--TTCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECC--CCCEEEEccCCCeEEEECCC-C
Confidence 34678999999999888887778899999987 5543 333221124589999998 88877777768899999987 4
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccC-CCCcceeeccCCceeeecCCCCCC----ceeccCCCceEEEeecCc
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA-NEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d 171 (314)
+.. .+...........+............. ......++. .............. +++.++|. +++ +....
T Consensus 135 ~~~---~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v-~~~~~ 208 (300)
T 2qc5_A 135 TIY---EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWF-VEIMG 208 (300)
T ss_dssp CEE---EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEE-EETTT
T ss_pred CEE---EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEE-EccCC
Confidence 321 111111111111111111111111111 122223333 22222222222111 77888874 444 34445
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCce-Eeeec
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TAMKV 250 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~-~~~~~ 250 (314)
+.|.+||. +++... +..+ . ....+.++. ++++ |+ +.++...++.|..||.. +... ..+..
T Consensus 209 ~~i~~~~~-~g~~~~-~~~~------~----~~~~~~~i~-~d~~---g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~ 269 (300)
T 2qc5_A 209 NKIGRITT-TGEISE-YDIP------T----PNARPHAIT-AGKN---SE-IWFTEWGANQIGRITND--NTIQEYQLQT 269 (300)
T ss_dssp TEEEEECT-TCCEEE-EECS------S----TTCCEEEEE-ECST---TC-EEEEETTTTEEEEECTT--SCEEEEECCS
T ss_pred CEEEEEcC-CCcEEE-EECC------C----CCCCceEEE-ECCC---CC-EEEeccCCCeEEEECCC--CcEEEEECCc
Confidence 78999998 444332 2210 1 123456776 8887 55 55555567899999984 4332 22333
Q ss_pred CCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 251 h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
....+.+++++++|.++++.. . .|..++.+
T Consensus 270 ~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 270 ENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp TTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred cCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 345688999999998666554 4 67766653
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.11 E-value=3.8e-08 Score=81.31 Aligned_cols=205 Identities=10% Similarity=0.011 Sum_probs=123.7
Q ss_pred ceeEEEEccCCCEEEEecCC------CeEEEEeCCCCeEEEEEeccCCc-ccEEEEEEcccCCCCeEEEee---------
Q 021291 20 SVTDVCFHQTKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQG--------- 83 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~--------- 83 (314)
.-..+...|+| +++++..+ |.|.+.|.++.+.+.++.....+ ..-+.+.|+| +++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p--~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL--PNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET--TTTEEEECBCCCHHHHTT
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC--CCCEEEEccCcCcccccc
Confidence 34556788999 77766555 78999999999999988643322 1235688899 889888885
Q ss_pred ----------cCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC
Q 021291 84 ----------RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (314)
Q Consensus 84 ----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (314)
.+.+|.+||+.+++... ++...........+.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~----tI~vg~~g~~P~~i~---------------------------------- 257 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIH----SLTLGEENRMALELR---------------------------------- 257 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEE----EEESCTTEEEEEEEE----------------------------------
T ss_pred ccchhhhhhccCCEEEEEECCCCcEee----EEecCCCCCccceeE----------------------------------
Confidence 36899999999875432 222211011111110
Q ss_pred ceeccCCCceEEEeec-----CcCeEEEEecCCCce--eeeecccccCCCCCc-C------CCCCceeeeEEEecCCCCC
Q 021291 154 DDVPAEGPKYMAVAGE-----QLSEVEIWDLNTAER--CTRLHQNSCGGSPNF-S------SKGRGMCMAVQAYLPSKSQ 219 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~-----~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h-~------~~~~~~~~~~~~~~p~~~~ 219 (314)
++++|++++.+++ +. .+++|.+|....++. ...+...... ..+. + .........+. ++||
T Consensus 258 f~~~Pdg~~aYV~-~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~-v~~~lp~~~~~f~~~~~~pa~I~-lS~D--- 331 (462)
T 2ece_A 258 PLHDPTKLMGFIN-MVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP-LEGNLPEILKPFKAVPPLVTDID-ISLD--- 331 (462)
T ss_dssp ECSSTTCCEEEEE-EEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE-CCSSCCGGGGGGTEECCCCCCEE-ECTT---
T ss_pred eeECCCCCEEEEE-EeeeccCCCceEEEEEecCCceeEEEEEeCCCcc-ccccccccccccccCCCceeEEE-ECCC---
Confidence 2368999887764 44 567888776654331 1111100000 0000 0 00013456676 9998
Q ss_pred CceEEEEeecCCcEEEEEccCCC--CceEeeecCC--------------cceEEEEEeCCCCeEEEec
Q 021291 220 GFVNVLAGYEDGSILVWDIRNPG--IPLTAMKVHL--------------EPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~h~--------------~~v~~~~~~~~~~~l~s~s 271 (314)
|+++.++.-..+.|.+||+...+ +.+..+.... ..-..+.++++|++|+.+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 66455666667899999986433 3333333210 1257899999999998877
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.07 E-value=1.8e-07 Score=77.27 Aligned_cols=226 Identities=10% Similarity=0.063 Sum_probs=128.4
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeec
Q 021291 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (314)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 108 (314)
++..++.++.++.|..+|..+++.+......... ...... .+..++.++.++.|..+|.++++... ....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~W----~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LSRPVV----SDGLVLIHTSNGQLQALNEADGAVKW----TVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CSCCEE----ETTEEEEECTTSEEEEEETTTCCEEE----EEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--EcCCEE----ECCEEEEEcCCCeEEEEECCCCcEEE----EEeC
Confidence 4557888889999999999999988877654321 111122 23578888889999999999987644 2221
Q ss_pred ceeeEE---Eeeeee-ccccccccCCCCcceeeccCCceeeec-CCCCC---------Cceec--cCCCceEEEeecCcC
Q 021291 109 NSYHFC---KLSLVK-EPYANAKQANEPKDCYEREVGETVDTD-SLCDS---------KDDVP--AEGPKYMAVAGEQLS 172 (314)
Q Consensus 109 ~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~--~~~~~~~~~~g~~d~ 172 (314)
...... ...+.. ..........+....++...++..-.. ..... .+.-. ..+..+++ ++.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~--~~~~g 249 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA--LAYNG 249 (376)
T ss_dssp CC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE--ECTTS
T ss_pred CCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE--EecCc
Confidence 111000 000000 111111111223334444444432211 11100 00011 12334443 44578
Q ss_pred eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec-C
Q 021291 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV-H 251 (314)
Q Consensus 173 ~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-h 251 (314)
.+..+|.++++.+..... . ....+. .. +. .++.++.++.|..+|..+ ++.+..... .
T Consensus 250 ~l~~~d~~tG~~~w~~~~-------------~-~~~~~~-~~-----~~-~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~ 307 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKREL-------------G-SVNDFI-VD-----GN-RIYLVDQNDRVMALTIDG-GVTLWTQSDLL 307 (376)
T ss_dssp CEEEEETTTCCEEEEECC-------------C-CEEEEE-EE-----TT-EEEEEETTCCEEEEETTT-CCEEEEECTTT
T ss_pred EEEEEECCCCcEEeeccC-------------C-CCCCce-EE-----CC-EEEEEcCCCeEEEEECCC-CcEEEeecccC
Confidence 999999999987766541 1 122222 32 22 677888899999999998 776655542 2
Q ss_pred CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
...+....... ..|+.++.+|.|.++|.++++.++..
T Consensus 308 ~~~~~~~~~~~--~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 308 HRLLTSPVLYN--GNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TSCCCCCEEET--TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCcccCCEEEC--CEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 22233333333 36888889999999999999987753
No 223
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.07 E-value=3.7e-08 Score=75.54 Aligned_cols=194 Identities=9% Similarity=0.031 Sum_probs=124.6
Q ss_pred CceEEecCCCCc--eeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 9 DPVAVLRGHRAS--VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 9 ~~~~~l~~h~~~--v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
+.++++ .|... ...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ .... ..-..+++.. + ...+..-.++
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~g--~-~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASDG--E-RLYQLTWTEG 116 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEECS--S-CEEEEESSSC
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEeC--C-EEEEEEccCC
Confidence 445566 35443 3688887 4667788888999999999999988877 3321 1123455544 3 4444555689
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
.+.+||.++.+.+. ++...... ..++++++.++++
T Consensus 117 ~v~V~D~~Tl~~~~----ti~~~~eG-----------------------------------------wGLt~Dg~~L~vS 151 (268)
T 3nok_A 117 LLFTWSGMPPQRER----TTRYSGEG-----------------------------------------WGLCYWNGKLVRS 151 (268)
T ss_dssp EEEEEETTTTEEEE----EEECSSCC-----------------------------------------CCEEEETTEEEEE
T ss_pred EEEEEECCcCcEEE----EEeCCCce-----------------------------------------eEEecCCCEEEEE
Confidence 99999999987544 22211100 2355777777765
Q ss_pred eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceE
Q 021291 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (314)
Q Consensus 167 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (314)
.| ++.|.++|..+.+.+.++.... +.. .-.....+. |. + |+ +.+....+..|.+.|.++ ++.+.
T Consensus 152 dG--s~~l~~iDp~T~~v~~~I~V~~------~g~-~v~~lNeLe-~~-d---G~-lyanvw~s~~I~vIDp~T-G~V~~ 215 (268)
T 3nok_A 152 DG--GTMLTFHEPDGFALVGAVQVKL------RGQ-PVELINELE-CA-N---GV-IYANIWHSSDVLEIDPAT-GTVVG 215 (268)
T ss_dssp CS--SSEEEEECTTTCCEEEEEECEE------TTE-ECCCEEEEE-EE-T---TE-EEEEETTCSEEEEECTTT-CBEEE
T ss_pred CC--CCEEEEEcCCCCeEEEEEEeCC------CCc-ccccccccE-Ee-C---CE-EEEEECCCCeEEEEeCCC-CcEEE
Confidence 43 5899999999999888776311 111 011223344 54 2 54 555555788999999998 88877
Q ss_pred eeecC-------------CcceEEEEEeCCCCeE-EEe
Q 021291 247 AMKVH-------------LEPVLCLSIDESCNGG-ISG 270 (314)
Q Consensus 247 ~~~~h-------------~~~v~~~~~~~~~~~l-~s~ 270 (314)
.+... .+-.+.|+++|++..| +||
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 76632 1356889999876555 554
No 224
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.07 E-value=2.3e-07 Score=70.54 Aligned_cols=196 Identities=9% Similarity=0.036 Sum_probs=124.4
Q ss_pred CceEEecCCCC--ceeEEEEccCCCEEEEecCCC--eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec
Q 021291 9 DPVAVLRGHRA--SVTDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (314)
Q Consensus 9 ~~~~~l~~h~~--~v~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (314)
+.+.++ .|.. -...+.|++ +.++.+.+.+| .|+++|+.+++.+..+...... .-..+++.. + ......-.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~--~-~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWR--D-RLIQLTWR 83 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET--T-EEEEEESS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeC--C-EEEEEEee
Confidence 456666 4654 356899986 56666666654 8999999999999888755421 123444433 2 44445556
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
++.+.+||..+.+.+. ++...... ..+++++..++
T Consensus 84 ~~~v~v~D~~tl~~~~----ti~~~~~G-----------------------------------------wglt~dg~~L~ 118 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRA----RFRYPGEG-----------------------------------------WALTSDDSHLY 118 (243)
T ss_dssp SSEEEEEETTTTEEEE----EEECSSCC-----------------------------------------CEEEECSSCEE
T ss_pred CCEEEEEECCcCcEEE----EEeCCCCc-----------------------------------------eEEeeCCCEEE
Confidence 8999999999887544 22211100 23556777777
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
++-| ++.|.++|..+.+.+.++.... +..+. .....+. +. + |+ +.+....+..|.+.|.++ ++.
T Consensus 119 vSdg--s~~l~~iDp~t~~~~~~I~V~~------~g~~~-~~lNeLe-~~-~---G~-lyanvw~s~~I~vIDp~t-G~V 182 (243)
T 3mbr_X 119 MSDG--TAVIRKLDPDTLQQVGSIKVTA------GGRPL-DNLNELE-WV-N---GE-LLANVWLTSRIARIDPAS-GKV 182 (243)
T ss_dssp EECS--SSEEEEECTTTCCEEEEEECEE------TTEEC-CCEEEEE-EE-T---TE-EEEEETTTTEEEEECTTT-CBE
T ss_pred EECC--CCeEEEEeCCCCeEEEEEEEcc------CCccc-ccceeeE-Ee-C---CE-EEEEECCCCeEEEEECCC-CCE
Confidence 6544 5889999999999888776310 11111 1223333 43 2 55 455555677999999998 888
Q ss_pred eEeeecC-------------CcceEEEEEeCCCCeEEEec
Q 021291 245 LTAMKVH-------------LEPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 245 ~~~~~~h-------------~~~v~~~~~~~~~~~l~s~s 271 (314)
+..+... .+-.+.|+++|++..|+..+
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 7776621 13568899999766554443
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.04 E-value=7.4e-08 Score=79.62 Aligned_cols=198 Identities=14% Similarity=0.102 Sum_probs=119.2
Q ss_pred cCCCEEE-EecCCCeEEEEeCCCC----eEEEEEec---c--CCcccEEEEEEcccCCCCeEEEeecC------CeEEEE
Q 021291 28 QTKPILF-AGTTGGELRIWDTVQH----RTVSSSWV---H--SAAHGIVSVATGPSIGLNKVISQGRD------GTVKCW 91 (314)
Q Consensus 28 ~~~~~l~-s~~~dg~v~iwd~~~~----~~~~~~~~---~--~~~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iw 91 (314)
+++++|+ ++..++.|.|+|+.+. +...+++. . .+...-..+...| ++ .++++..+ |.|.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p--dG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP--DA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS--SC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC--Ce-EEEEcCCCcCCCCCCeEEEE
Confidence 7777665 5677889999998755 66666631 0 0112356678889 87 77776655 789999
Q ss_pred eCCCCCCCCCCeeeeecceee-EEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEee--
Q 021291 92 DIENGGLSSNPSLTIKTNSYH-FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG-- 168 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 168 (314)
|.++.+.+. +....... ...+ ++-|+|+++.++ ++.
T Consensus 170 D~~T~~v~~----~~~~~~~~~~~~Y------------------------------------d~~~~p~~~~mv-sS~wg 208 (462)
T 2ece_A 170 DHYSFEPLG----KWEIDRGDQYLAY------------------------------------DFWWNLPNEVLV-SSEWA 208 (462)
T ss_dssp CTTTCCEEE----ECCSBCTTCCCCC------------------------------------CEEEETTTTEEE-ECBCC
T ss_pred ECCCCeEEE----EEccCCCCccccc------------------------------------eEEECCCCCEEE-EccCc
Confidence 999887543 22111000 0000 033688887444 332
Q ss_pred ----------------cCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEE-EecCCCCCCceEEEEee---
Q 021291 169 ----------------EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ-AYLPSKSQGFVNVLAGY--- 228 (314)
Q Consensus 169 ----------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~-~~~p~~~~g~~~l~~g~--- 228 (314)
..+.+|.+||+.+++.+.++.. +. .......+. +|+|+ ++..++++-
T Consensus 209 ~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v-------g~---~g~~P~~i~f~~~Pd---g~~aYV~~e~~~ 275 (462)
T 2ece_A 209 VPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL-------GE---ENRMALELRPLHDPT---KLMGFINMVVSL 275 (462)
T ss_dssp CHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES-------CT---TEEEEEEEEECSSTT---CCEEEEEEEEET
T ss_pred CccccccccchhhhhhccCCEEEEEECCCCcEeeEEec-------CC---CCCccceeEeeECCC---CCEEEEEEeeec
Confidence 2358999999999888777763 10 112333333 15887 553444444
Q ss_pred --cCCcEEEEEccCCCCc--eEee--ec----------------CCcceEEEEEeCCCCeEEEec-CCCcEEEEecCC
Q 021291 229 --EDGSILVWDIRNPGIP--LTAM--KV----------------HLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDH 283 (314)
Q Consensus 229 --~dg~i~vwd~~~~~~~--~~~~--~~----------------h~~~v~~~~~~~~~~~l~s~s-~dg~i~iw~~~~ 283 (314)
.+++|.+|..+. +.. .+.+ .. -......|.+++|+++|..+. ..+.|.+||+..
T Consensus 276 ~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 276 KDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 677888776654 321 1111 00 013467899999999885554 478999999863
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=1.8e-07 Score=75.06 Aligned_cols=214 Identities=10% Similarity=0.001 Sum_probs=119.2
Q ss_pred cEEEEEEcccCCCCeEEE-------eecCCeEEEEeCCCCCCCCCCeeee-----ecceeeEEEeeeeeccccccccCCC
Q 021291 64 GIVSVATGPSIGLNKVIS-------QGRDGTVKCWDIENGGLSSNPSLTI-----KTNSYHFCKLSLVKEPYANAKQANE 131 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s-------~~~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (314)
...+++|.+ ++..+++ ...++.|.+||..+++... +.. .........+.... ..........
T Consensus 19 ~~~~~~~~~--~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~~~~~i~~~~~~-g~l~v~~~~~ 92 (314)
T 1pjx_A 19 GAEGPVFDK--NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV---ICKPEVNGYGGIPAGCQCDRDA-NQLFVADMRL 92 (314)
T ss_dssp TCEEEEECT--TSCEEEEETTCEETTEECCEEEEECTTTCCEEE---EECCEETTEECCEEEEEECSSS-SEEEEEETTT
T ss_pred CccCceECC--CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE---EEecccCCCCCCCceEEEecCC-CcEEEEECCC
Confidence 368999998 8887777 6778999999988775421 111 00111111111110 1111111122
Q ss_pred CcceeeccCCceeee-c--CCCC----CC-ceeccCCCceEEEeecCc---------------CeEEEEecCCCceeeee
Q 021291 132 PKDCYEREVGETVDT-D--SLCD----SK-DDVPAEGPKYMAVAGEQL---------------SEVEIWDLNTAERCTRL 188 (314)
Q Consensus 132 ~~~~~~~~~~~~~~~-~--~~~~----~~-~~~~~~~~~~~~~~g~~d---------------~~i~vwd~~~~~~~~~~ 188 (314)
....++.. +..... . .... .. ++++++|. ++++ ...+ +.|..||.. ++.....
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWIT-APAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEE-ECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEE-ecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 33344444 332211 1 1111 11 88889885 4433 3323 567888765 4433222
Q ss_pred cccccCCCCCcCCCCCceeeeEEEec----CCCCCCceEEEEeecCCcEEEEEccCCCC-----ceEeeecCC-cceEEE
Q 021291 189 HQNSCGGSPNFSSKGRGMCMAVQAYL----PSKSQGFVNVLAGYEDGSILVWDIRNPGI-----PLTAMKVHL-EPVLCL 258 (314)
Q Consensus 189 ~~~~~~~~~~h~~~~~~~~~~~~~~~----p~~~~g~~~l~~g~~dg~i~vwd~~~~~~-----~~~~~~~h~-~~v~~~ 258 (314)
. + ......+. ++ |+ ++.++++...++.|.+||.+..+. ....+..+. ..+..+
T Consensus 169 ~---------~----~~~~~~i~-~~~~~d~d---g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 169 T---------A----FQFPNGIA-VRHMNDGR---PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp E---------E----ESSEEEEE-EEECTTSC---EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred c---------C----CCCcceEE-EecccCCC---CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 2 1 11234555 88 87 542455556788999999862133 223333443 567889
Q ss_pred EEeCCCCeEEEecCCCcEEEEecCCCeeeEe-------eeeeeecCCCc-eece
Q 021291 259 SIDESCNGGISGGADQKIVLYNLDHSTYVLF-------GIGFVCDQEGN-KFGT 304 (314)
Q Consensus 259 ~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~-------~~~~~~~~~~~-~~~~ 304 (314)
+++++|+++++...++.|.+||.++++.+.. ..++.++++|. ++.+
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 9999999888877788999999986654332 34456677776 4443
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.00 E-value=2.8e-08 Score=88.40 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=46.1
Q ss_pred CcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
|.|..||+.+ ++.+..+.. ..++....+...+..++.++.||.+++||.++++.++.+
T Consensus 457 g~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVA-QKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCC-CcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 7899999998 777776653 344555556666778888999999999999999998864
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=1.7e-07 Score=76.51 Aligned_cols=232 Identities=10% Similarity=-0.034 Sum_probs=127.7
Q ss_pred CCCCceeEEEEccCCCEEEEecC-----CCeEEEEeCCCCeEEEEEeccCC----cccEEEEEEcccCCCCeE-EEee--
Q 021291 16 GHRASVTDVCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSIGLNKV-ISQG-- 83 (314)
Q Consensus 16 ~h~~~v~~~~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l-~s~~-- 83 (314)
+|...+..++++++++++++-.. ++.|.+||+.+++.+..+..... ...+..+++.+ ++..+ ++-.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~--~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL--IHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET--TTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEec--CCCEEEEEcCcc
Confidence 46678999999999877665443 57899999999988777754321 12368899997 54444 4544
Q ss_pred -cCCeEEEEeCCCCCCCCCCeeeeecceee-EEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCC
Q 021291 84 -RDGTVKCWDIENGGLSSNPSLTIKTNSYH-FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (314)
Q Consensus 84 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
.++.|.+||+.+++... .+..+..... ...+.+.+..... ....+....+ ..+-..++|+|+++
T Consensus 142 ~~~~~i~v~d~~~g~~~r--~~~~~~~~~~~~~~~~~~g~~~~~-~~~~g~~~~~-----------~~~~~gia~s~dg~ 207 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR--VLQGYPGIAPEDIDLVIDGVPVQI-GQPDGTVIRP-----------HLGVNGIVLDAENE 207 (343)
T ss_dssp GGGCEEEEEETTTCCEEE--ECTTCTTTSCCSCCCEETTEECBE-ECTTSCEECC-----------CCCEEEEEECTTSC
T ss_pred CCCCeEEEEECCCCCEEE--EecCCCcccccccceeECCEEEEe-ccCCCceece-----------ecccceeEeccCCC
Confidence 67899999998775322 1100000000 0001110000000 0000000000 00011188999998
Q ss_pred ceEEEeecCcCeEEEEecC---CCc-----eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcE
Q 021291 162 KYMAVAGEQLSEVEIWDLN---TAE-----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (314)
Q Consensus 162 ~~~~~~g~~d~~i~vwd~~---~~~-----~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (314)
.++++ ....+.+..++.. .+. ....+... ++ .+....++ ++++ |. ++++...++.|
T Consensus 208 ~ly~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------g~----~g~pdgia-~d~~---G~-l~va~~~~~~V 271 (343)
T 2qe8_A 208 WLYLS-PMHSTSMYRIKSADLSNLQLTDAELGSKIERY------SE----KPICDGIS-IDKD---HN-IYVGDLAHSAI 271 (343)
T ss_dssp EEEEE-ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE------EE----CCSCSCEE-ECTT---CC-EEEEEGGGTEE
T ss_pred EEEEE-eCCCCeEEEEEHHHhcCCCCChhhhhcceEec------cc----CCCCceEE-ECCC---CC-EEEEccCCCeE
Confidence 77653 3333456665532 111 00000000 11 11233454 8887 65 77888888999
Q ss_pred EEEEccCCCCceEeeec-CCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 234 LVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 234 ~vwd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
.+||..+ ++....... +...+.+++|++++.++++.+..+.+.+|.
T Consensus 272 ~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 272 GVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEETTT-TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred EEEECCC-CCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 9999844 443322221 245689999999998888887666665554
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=2.6e-10 Score=94.12 Aligned_cols=188 Identities=13% Similarity=0.092 Sum_probs=98.1
Q ss_pred CCCCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccC-CCCeEEEeec
Q 021291 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVISQGR 84 (314)
Q Consensus 6 ~~~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~~~ 84 (314)
..++.+..++. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+.. ..+. -+|.. ++..+++++.
T Consensus 27 ~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-~~~~---~sp~~~~~~~v~~g~~ 100 (369)
T 2hz6_A 27 RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-ELVQ---ASPCRSSDGILYMGKK 100 (369)
T ss_dssp TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-HHHT---TCSCC-----CCCCEE
T ss_pred CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-cccc---cCceEecCCEEEEEeC
Confidence 34567777765 5566666667787888889999999999998887766644321 1111 11110 3357788889
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
|+.|..||.++++..+ ....... ..++|++..++
T Consensus 101 dg~v~a~D~~tG~~~w----~~~~~~~------------------------------------------~~~~p~~~~v~ 134 (369)
T 2hz6_A 101 QDIWYVIDLLTGEKQQ----TLSSAFA------------------------------------------DSLSPSTSLLY 134 (369)
T ss_dssp EEEEEEECCC--------------------------------------------------------------------EE
T ss_pred CCEEEEEECCCCcEEE----EecCCCc------------------------------------------ccccccCCEEE
Confidence 9999999999998755 2211110 11345555444
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
.++.|+.|+.||.++++.+..+.. + ...... +.++...+. .+++++.||.|+.||.++ ++.
T Consensus 135 --~~~~dg~v~a~d~~tG~~~W~~~~--------~------~~~~~~-~~~~~~~~~-~v~~~~~dg~v~a~d~~t-G~~ 195 (369)
T 2hz6_A 135 --LGRTEYTITMYDTKTRELRWNATY--------F------DYAASL-PEDDVDYKM-SHFVSNGDGLVVTVDSES-GDV 195 (369)
T ss_dssp --EEEEEEEEECCCSSSSSCCCEEEE--------E------EECCBC-CCCCTTCCC-CEEEEETSCEEEEECTTT-CCE
T ss_pred --EEecCCEEEEEECCCCCEEEeEec--------c------cccCcc-ccCCccccc-eEEEECCCCEEEEEECCC-CcE
Confidence 355579999999999987766542 1 011111 333210012 577788999999999998 777
Q ss_pred eEeeecCCcceEE-EEEeCCCC
Q 021291 245 LTAMKVHLEPVLC-LSIDESCN 265 (314)
Q Consensus 245 ~~~~~~h~~~v~~-~~~~~~~~ 265 (314)
+..... ..++.. ..+++++.
T Consensus 196 ~W~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 196 LWIQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEEC-SSCEEEEEECTTSSC
T ss_pred EEEecC-CCceEEEEEecCCce
Confidence 776663 445544 33456664
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.95 E-value=1.1e-07 Score=77.86 Aligned_cols=63 Identities=11% Similarity=-0.167 Sum_probs=49.6
Q ss_pred EEEEecCCC----eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee----------cCCeEEEEeCCCCC
Q 021291 32 ILFAGTTGG----ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWDIENGG 97 (314)
Q Consensus 32 ~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~ 97 (314)
.+++-..++ +|.+.|..+++.+.++.... .+ .+.++| |+++++.+. .+++|.+||+.+++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~--~P--~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF--LS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECT--TC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCC--CC--ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 344444444 88899999999999987665 34 799999 999998876 47899999999987
Q ss_pred CCC
Q 021291 98 LSS 100 (314)
Q Consensus 98 ~~~ 100 (314)
.+.
T Consensus 108 vv~ 110 (368)
T 1mda_H 108 PIA 110 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.94 E-value=1.6e-07 Score=84.10 Aligned_cols=200 Identities=8% Similarity=-0.016 Sum_probs=120.8
Q ss_pred eEEEEccCCCEEEEecCCC-------------eEEEEeCCCCeE--EEEEeccC-CcccEEEEEEcccCCCCeEEEeec-
Q 021291 22 TDVCFHQTKPILFAGTTGG-------------ELRIWDTVQHRT--VSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR- 84 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~dg-------------~v~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~- 84 (314)
..++|+ ||+.|+.++.+. .|++|++.++.. ...+.... +...+..+.|+| |+++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~ 254 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE--DDRFLLISAAN 254 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT--TSCEEEEEEES
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC--CCCEEEEEEcc
Confidence 578999 999998887774 499999987542 22333221 123478899999 9998764332
Q ss_pred ---CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCC
Q 021291 85 ---DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (314)
Q Consensus 85 ---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
+..|.++|+.++.... ..+........ ..++++|+
T Consensus 255 ~~~~~~i~~~d~~~~~~~~---~~l~~~~~~~~---------------------------------------~~~~~~g~ 292 (693)
T 3iuj_A 255 STSGNRLYVKDLSQENAPL---LTVQGDLDADV---------------------------------------SLVDNKGS 292 (693)
T ss_dssp SSSCCEEEEEETTSTTCCC---EEEECSSSSCE---------------------------------------EEEEEETT
T ss_pred CCCCcEEEEEECCCCCCce---EEEeCCCCceE---------------------------------------EEEeccCC
Confidence 3589999998764211 11111100000 11556677
Q ss_pred ceEEEeecC--cCeEEEEecCCCce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCC--cEEE
Q 021291 162 KYMAVAGEQ--LSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILV 235 (314)
Q Consensus 162 ~~~~~~g~~--d~~i~vwd~~~~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--~i~v 235 (314)
.+++.+... .+.|..+|+.++.. ...+. .|.. ... . |+|+ ++.++++...++ .|++
T Consensus 293 ~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~----~~~--~-~s~~---g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 293 TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--------PERQ----QVL--T-VHSG---SGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--------CCCS----SCE--E-EEEE---TTEEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCccccEEEe--------cCCC----CEE--E-EEEE---CCEEEEEEEECCeeEEEE
Confidence 776655331 36899999987654 23444 3322 122 4 8887 442445555555 6888
Q ss_pred EEccCCCCceEeee-cCCcceEEEEEeCCCCeEEEecCC----CcEEEEecCCCee
Q 021291 236 WDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTY 286 (314)
Q Consensus 236 wd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d----g~i~iw~~~~~~~ 286 (314)
||+.. .....+. .....+..+.+++++..|+....+ +.|..||+.+++.
T Consensus 355 ~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 355 FDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 88873 3444443 234567777788888766554443 7899999987753
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.91 E-value=1.4e-06 Score=67.51 Aligned_cols=171 Identities=9% Similarity=-0.033 Sum_probs=108.9
Q ss_pred eEEEEEeccCCcccEEEEEEcccCCCCeEEEeec--CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeecccccccc
Q 021291 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128 (314)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (314)
+.+.++. |........+.|++ ++.++++.+. ++.|+++|+.+++... .+.+......
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~--~i~l~~~~fg---------------- 68 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVEN--IHKMDDSYFG---------------- 68 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEE--EEECCTTCCE----------------
T ss_pred eEEEEEE-CCCCCCcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEE--EEecCCCcce----------------
Confidence 4455553 33223468999999 8655555443 5799999999997644 1111111111
Q ss_pred CCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceee
Q 021291 129 ANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (314)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 208 (314)
..+..+++.+++ +.-.++.+.++|..+.+.+.+++. + . ..+ +
T Consensus 69 -------------------------eGi~~~g~~lyv-~t~~~~~v~viD~~t~~v~~~i~~-------g-~--~~g--~ 110 (266)
T 2iwa_A 69 -------------------------EGLTLLNEKLYQ-VVWLKNIGFIYDRRTLSNIKNFTH-------Q-M--KDG--W 110 (266)
T ss_dssp -------------------------EEEEEETTEEEE-EETTCSEEEEEETTTTEEEEEEEC-------C-S--SSC--C
T ss_pred -------------------------EEEEEeCCEEEE-EEecCCEEEEEECCCCcEEEEEEC-------C-C--CCe--E
Confidence 112334556665 455689999999999999988873 2 0 112 2
Q ss_pred eEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecC--Cc---ceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH--LE---PVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h--~~---~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
. ++++ |+.++++ ..++.|.++|..+ .+.+..+..- .. .++.+.|. +++..+....++.|.+.|..+
T Consensus 111 g---lt~D---g~~l~vs-~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 111 G---LATD---GKILYGS-DGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp E---EEEC---SSSEEEE-CSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT
T ss_pred E---EEEC---CCEEEEE-CCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCC
Confidence 2 4455 4324444 4688999999988 6666666522 12 36788888 676666666788999999999
Q ss_pred CeeeEe
Q 021291 284 STYVLF 289 (314)
Q Consensus 284 ~~~~~~ 289 (314)
++.+..
T Consensus 182 g~V~~~ 187 (266)
T 2iwa_A 182 GTLLGW 187 (266)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 986654
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.90 E-value=3.9e-07 Score=81.31 Aligned_cols=59 Identities=15% Similarity=0.185 Sum_probs=46.1
Q ss_pred CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+|.|+.||+.+ ++.+..+..+. ++..-.+...+.+++.++.||.|+.||.++++.++..
T Consensus 454 ~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 454 SGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 37899999998 88777776543 3333355556668899999999999999999999864
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=2.2e-07 Score=79.52 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=129.0
Q ss_pred CCCEEEEecC-CCeEEEEeCCCCeEEEEEeccCCcccEEEEEE-c-ccCCCCeEEEee------------------cCCe
Q 021291 29 TKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT-G-PSIGLNKVISQG------------------RDGT 87 (314)
Q Consensus 29 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~l~s~~------------------~dg~ 87 (314)
||++|+.... ++.|.+.|+.+.++...+..... ..+..+++ . | ++++++.++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p--~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWP--RSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSS--BCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecC--CCcEEEEecccccccCCCCcccccccccCce
Confidence 7887766554 66799999999999886654432 33788888 4 7 888888874 2457
Q ss_pred EEEEeCCCCCCCCCCeeeeec-ceeeEEEeeeeeccccccccCCCCcceeeccCCceeee--cCCCCCCceeccCCCceE
Q 021291 88 VKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT--DSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 164 (314)
+.+.|.++.+... ++.. .....+.+++.+................+......... .........+.++|+...
T Consensus 177 vtvID~~t~~v~~----qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 177 FTAVDADKWEVAW----QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEETTTTEEEE----EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEEECCCCeEEE----EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 8888988775533 2221 11122222222211111111111110000000000000 000000022445666544
Q ss_pred EEeecCcCeEEEEecCC--Cce-eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC
Q 021291 165 AVAGEQLSEVEIWDLNT--AER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~--~~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (314)
+ +.|.+.|.++ ++. +..++. + ....++. ++|| |+..++++..+.+|.++|+.+.
T Consensus 253 i------~~V~VID~~~~~~~~~~~~Ipv-------g------~~PhGv~-~sPD---Gk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 253 L------NGVKVVDGRKEASSLFTRYIPI-------A------NNPHGCN-MAPD---KKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp E------TTEEEEECSGGGCCSSEEEEEE-------E------SSCCCEE-ECTT---SSEEEEECTTSSBEEEEEGGGH
T ss_pred E------CcEEEEeCcccCCceeEEEEec-------C------CCceEEE-EcCC---CCEEEEeCCCCCeEEEEECccc
Confidence 2 3499999987 444 444542 1 1234454 9998 7767788888999999999852
Q ss_pred C-----------CceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 242 G-----------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 242 ~-----------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
. ..+..+.. ......++|+++|...++.-.|+.|.+||++.
T Consensus 310 ~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1 12333332 34678999999995556777899999999987
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=1.5e-06 Score=66.70 Aligned_cols=168 Identities=12% Similarity=0.051 Sum_probs=108.9
Q ss_pred EEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC--eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccC
Q 021291 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA 129 (314)
Q Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (314)
.+.++ .|........|.|+. +.++.+.+.+| .|+.+|+++++... ...+......
T Consensus 33 vv~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~Tgkv~~--~~~l~~~~Fg----------------- 89 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYRN---GYFYESTGLNGRSSIRKVDIESGKTLQ--QIELGKRYFG----------------- 89 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEET---TEEEEEEEETTEEEEEEECTTTCCEEE--EEECCTTCCE-----------------
T ss_pred EEEEe-cCCCCcccceEEEEC---CEEEEECCCCCCceEEEEECCCCcEEE--EEecCCccce-----------------
Confidence 44555 355445568899874 46777777776 89999999997644 1111111100
Q ss_pred CCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeee
Q 021291 130 NEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA 209 (314)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 209 (314)
..+.++++.+++++. .++.+.+||..+.+.+.+++. ...-+.
T Consensus 90 ------------------------eGit~~g~~ly~ltw-~~~~v~v~D~~t~~~~~ti~~-------------~~eG~g 131 (262)
T 3nol_A 90 ------------------------EGISDWKDKIVGLTW-KNGLGFVWNIRNLRQVRSFNY-------------DGEGWG 131 (262)
T ss_dssp ------------------------EEEEEETTEEEEEES-SSSEEEEEETTTCCEEEEEEC-------------SSCCCC
T ss_pred ------------------------eEEEEeCCEEEEEEe-eCCEEEEEECccCcEEEEEEC-------------CCCceE
Confidence 113344566766544 479999999999999999883 111223
Q ss_pred EEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecC--C---cceEEEEEeCCCCeEEEecCCCcEEEEecCCC
Q 021291 210 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH--L---EPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (314)
Q Consensus 210 ~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~ 284 (314)
+.++ +. .|+....++.|.++|..+ .+.+..+... . ..++.+.|. +|+..+..-.++.|.+.|.+++
T Consensus 132 ---lt~d---g~-~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 132 ---LTHN---DQ-YLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp ---EEEC---SS-CEEECCSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC
T ss_pred ---EecC---CC-EEEEECCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC
Confidence 3344 33 455545578899999998 6777666532 2 234567786 6766666667889999999999
Q ss_pred eeeEe
Q 021291 285 TYVLF 289 (314)
Q Consensus 285 ~~~~~ 289 (314)
+.+..
T Consensus 203 ~V~~~ 207 (262)
T 3nol_A 203 KVTGI 207 (262)
T ss_dssp BEEEE
T ss_pred cEEEE
Confidence 87654
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.88 E-value=1.8e-06 Score=66.23 Aligned_cols=168 Identities=10% Similarity=-0.015 Sum_probs=111.7
Q ss_pred eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCC
Q 021291 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (314)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (314)
+.+.++ .|........|.|+. +.++.+.+.+|.|+++|+++++... .. +......
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~--~~-l~~~~Fg------------------ 98 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVW--ME-RLGNIFA------------------ 98 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSE--EE-ECTTCCE------------------
T ss_pred EEEEEE-cCCCccccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEe--EE-CCCCcce------------------
Confidence 344555 354445568899875 3777788889999999999998755 22 2221111
Q ss_pred CCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeE
Q 021291 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV 210 (314)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 210 (314)
..+.++++.+++++ -.++.+.+||..+.+.+.+++. ...-+.+
T Consensus 99 -----------------------eGit~~g~~Ly~lt-w~~~~v~V~D~~Tl~~~~ti~~-------------~~eGwGL 141 (268)
T 3nok_A 99 -----------------------EGLASDGERLYQLT-WTEGLLFTWSGMPPQRERTTRY-------------SGEGWGL 141 (268)
T ss_dssp -----------------------EEEEECSSCEEEEE-SSSCEEEEEETTTTEEEEEEEC-------------SSCCCCE
T ss_pred -----------------------eEEEEeCCEEEEEE-ccCCEEEEEECCcCcEEEEEeC-------------CCceeEE
Confidence 01334556677654 4579999999999999999883 1112333
Q ss_pred EEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec--CCc---ceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 211 QAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV--HLE---PVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 211 ~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--h~~---~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
.++ ++ .|+.+..++.|.++|..+ .+.+..+.. +.. .++.+.|. +|+..+..-.++.|.+.|.++++
T Consensus 142 ---t~D---g~-~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 142 ---CYW---NG-KLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp ---EEE---TT-EEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred ---ecC---CC-EEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 333 44 455555688999999998 677766653 222 45677887 66666666678899999999998
Q ss_pred eeEe
Q 021291 286 YVLF 289 (314)
Q Consensus 286 ~~~~ 289 (314)
.+..
T Consensus 213 V~~~ 216 (268)
T 3nok_A 213 VVGV 216 (268)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=5.1e-06 Score=68.57 Aligned_cols=235 Identities=11% Similarity=0.053 Sum_probs=129.1
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCC-------cccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCC
Q 021291 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101 (314)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 101 (314)
++..++.++.++.|..+|..+++.+........ ...+.+.-. . ++..++.++.++.|..+|.++++...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~v~~~~g~l~a~d~~tG~~~W- 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-V--SGGHVYIGSEKAQVYALNTSDGTVAW- 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-E--ETTEEEEEETTSEEEEEETTTCCEEE-
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-E--eCCEEEEEcCCCEEEEEECCCCCEEE-
Confidence 456788888899999999999998877765321 112322222 2 34778888899999999999987644
Q ss_pred CeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeec-CCCC-------CCceeccCCCceEEEeecCcCe
Q 021291 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-SLCD-------SKDDVPAEGPKYMAVAGEQLSE 173 (314)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~g~~d~~ 173 (314)
.............. ...........+....++...++..-.. .... ...... +..++ .+..++.
T Consensus 128 ---~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~--~g~~~g~ 199 (376)
T 3q7m_A 128 ---QTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAV--VGGDNGR 199 (376)
T ss_dssp ---EEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEE--ECCTTTE
T ss_pred ---EEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEE--EEcCCCE
Confidence 22211100000000 0111111122223333444444322211 1111 112222 23333 3556799
Q ss_pred EEEEecCCCceeeeecccccCCCCCcCCCCC--ceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecC
Q 021291 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGR--GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 251 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h 251 (314)
|..+|.++++.+...... ...... .....+. -.|.-. +. .++.++.++.|..+|.++ ++.+.....
T Consensus 200 l~~~d~~tG~~~w~~~~~-------~~~~~~~~~~~~~~~-~~p~~~-~~-~v~~~~~~g~l~~~d~~t-G~~~w~~~~- 267 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRIS-------QATGSTEIDRLSDVD-TTPVVV-NG-VVFALAYNGNLTALDLRS-GQIMWKREL- 267 (376)
T ss_dssp EEEEETTTCCEEEEEECC-------C-----------CCC-CCCEEE-TT-EEEEECTTSCEEEEETTT-CCEEEEECC-
T ss_pred EEEEECCCCcEEEEEecc-------cCCCCcccccccccC-CCcEEE-CC-EEEEEecCcEEEEEECCC-CcEEeeccC-
Confidence 999999999887666521 000000 0000000 111001 22 677788899999999998 776655442
Q ss_pred CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
.....+... +..|+.++.++.|..+|..+++.++..
T Consensus 268 -~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 268 -GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp -CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred -CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 334455554 336777778999999999999887753
No 238
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=6.9e-06 Score=65.45 Aligned_cols=181 Identities=10% Similarity=-0.032 Sum_probs=106.4
Q ss_pred cEEEEEEcccCCCC-eEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc
Q 021291 64 GIVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (314)
Q Consensus 64 ~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (314)
-..+..|++ +.+ ++++...++.|..||..+++.. ..........
T Consensus 14 ~~Egp~w~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-----~~~~~~~~~~---------------------------- 58 (297)
T 3g4e_A 14 CGESPVWEE--VSNSLLFVDIPAKKVCRWDSFTKQVQ-----RVTMDAPVSS---------------------------- 58 (297)
T ss_dssp BEEEEEEET--TTTEEEEEETTTTEEEEEETTTCCEE-----EEECSSCEEE----------------------------
T ss_pred cccCCeEEC--CCCEEEEEECCCCEEEEEECCCCcEE-----EEeCCCceEE----------------------------
Confidence 367889998 544 5556667889999999876431 1111111111
Q ss_pred eeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCce
Q 021291 143 TVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~ 222 (314)
++++++|+ +++ +. ++.|.+||..+++...... .........+..+. ++|+ |+.
T Consensus 59 -----------i~~~~dG~-l~v-~~--~~~l~~~d~~~g~~~~~~~--------~~~~~~~~~~~di~-~d~d---G~l 111 (297)
T 3g4e_A 59 -----------VALRQSGG-YVA-TI--GTKFCALNWKEQSAVVLAT--------VDNDKKNNRFNDGK-VDPA---GRY 111 (297)
T ss_dssp -----------EEEBTTSS-EEE-EE--TTEEEEEETTTTEEEEEEE--------CCTTCSSEEEEEEE-ECTT---SCE
T ss_pred -----------EEECCCCC-EEE-EE--CCeEEEEECCCCcEEEEEe--------cCCCCCCCCCCCEE-ECCC---CCE
Confidence 55888887 444 22 4679999998776433222 11111223466776 8887 663
Q ss_pred EEEEeec--------CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeE-EEecCCCcEEEEecC--CCee----e
Q 021291 223 NVLAGYE--------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLD--HSTY----V 287 (314)
Q Consensus 223 ~l~~g~~--------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~iw~~~--~~~~----~ 287 (314)
++.+... ...-.||.+...++. ..+..+....+.++|+|+++.| ++.+.++.|.+|+++ ++.. +
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~ 190 (297)
T 3g4e_A 112 FAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS 190 (297)
T ss_dssp EEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE
T ss_pred EEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE
Confidence 3333221 123455555432333 3333344567899999999865 566678899999974 4432 1
Q ss_pred E--------eeeeeeecCCCceeceeec
Q 021291 288 L--------FGIGFVCDQEGNKFGTTWH 307 (314)
Q Consensus 288 ~--------~~~~~~~~~~~~~~~~~w~ 307 (314)
+ ...+++.+++|.+..+.|.
T Consensus 191 ~~~~~~~~~~p~g~~~d~~G~lwva~~~ 218 (297)
T 3g4e_A 191 VYKLEKEEQIPDGMCIDAEGKLWVACYN 218 (297)
T ss_dssp EEECCGGGCEEEEEEEBTTSCEEEEEET
T ss_pred EEECCCCCCCCCeeEECCCCCEEEEEcC
Confidence 1 1345678888887777653
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=3.5e-07 Score=78.33 Aligned_cols=222 Identities=9% Similarity=0.096 Sum_probs=138.1
Q ss_pred CceeEEEE-c-cCCCEEEEec------------------CCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCe
Q 021291 19 ASVTDVCF-H-QTKPILFAGT------------------TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK 78 (314)
Q Consensus 19 ~~v~~~~~-~-~~~~~l~s~~------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 78 (314)
.....+++ + |+++++++++ .++.+.+.|.++.+....+..... -..++++| ++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~---pd~~~~sp--dGk~ 208 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN---LDNCDADY--EGKW 208 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC---CCCEEECS--SSSE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC---ccceEECC--CCCE
Confidence 45778887 4 8999988884 356899999999988888775432 35678999 9999
Q ss_pred EEEeecCC---------------eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC--C
Q 021291 79 VISQGRDG---------------TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV--G 141 (314)
Q Consensus 79 l~s~~~dg---------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 141 (314)
+++.+.+. .|.+.|....+. ....... ... +...+++... .
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~------~v~~Gk~---------------~~i-~~V~VID~~~~~~ 266 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK------AIAAGDY---------------QEL-NGVKVVDGRKEAS 266 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH------HHHHTCS---------------EEE-TTEEEEECSGGGC
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeE------eccCCCe---------------eEE-CcEEEEeCcccCC
Confidence 99888653 244444322110 0000000 000 2244445544 2
Q ss_pred ce-eeecCCCCC--CceeccCCCceEEEeecCcCeEEEEecCCCc------------eeeeecccccCCCCCcCCCCCce
Q 021291 142 ET-VDTDSLCDS--KDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE------------RCTRLHQNSCGGSPNFSSKGRGM 206 (314)
Q Consensus 142 ~~-~~~~~~~~~--~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~------------~~~~~~~~~~~~~~~h~~~~~~~ 206 (314)
.. ......+.. .+.++|||+++++ ++..+.+|.++|+.+.+ ...... ....
T Consensus 267 ~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-------------vG~g 332 (595)
T 1fwx_A 267 SLFTRYIPIANNPHGCNMAPDKKHLCV-AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-------------LGLG 332 (595)
T ss_dssp CSSEEEEEEESSCCCEEECTTSSEEEE-ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-------------CCSC
T ss_pred ceeEEEEecCCCceEEEEcCCCCEEEE-eCCCCCeEEEEECcccccccccccCcccceEEEcC-------------CCCC
Confidence 22 111111212 2899999998776 56668999999998653 122222 2234
Q ss_pred eeeEEEecCCCCCCceEEEEeecCCcEEEEEccC---------CCCceEeeecCCcceE-----EEEEeCCCCeEEEecC
Q 021291 207 CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN---------PGIPLTAMKVHLEPVL-----CLSIDESCNGGISGGA 272 (314)
Q Consensus 207 ~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~---------~~~~~~~~~~h~~~v~-----~~~~~~~~~~l~s~s~ 272 (314)
...++ |+|+ | ...++...|++|.+||+.. ..+.+..+..|-.+-. .+.+++||++|++...
T Consensus 333 P~h~a-F~~d---G-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 333 PLHTA-FDGR---G-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEE-ECTT---S-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cceEE-ECCC---C-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 56666 9998 6 3778888999999999875 1345667776654421 1234899999988753
Q ss_pred ---CCcE----------EEEecCCCee
Q 021291 273 ---DQKI----------VLYNLDHSTY 286 (314)
Q Consensus 273 ---dg~i----------~iw~~~~~~~ 286 (314)
|..+ .++|+..++.
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred CCccccccCCCCCCCcceEEEcCCCcE
Confidence 4431 8899965553
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.79 E-value=8.9e-07 Score=78.84 Aligned_cols=213 Identities=11% Similarity=0.061 Sum_probs=121.9
Q ss_pred eEEEEccCCCEEEEecCCC-------------------eEEEEeCCCCeEEEEEeccCCc-------ccEEEEEEcccCC
Q 021291 22 TDVCFHQTKPILFAGTTGG-------------------ELRIWDTVQHRTVSSSWVHSAA-------HGIVSVATGPSIG 75 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~dg-------------------~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 75 (314)
..++++|++.+++.++.++ .|..+|.++|+.+..++...+. ....-+.... +
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~--d 323 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI--A 323 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE--T
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc--C
Confidence 4678999888888887664 5999999999999888753221 1122334444 6
Q ss_pred C---CeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceee-EEEeeeeeccccccccCCCCcceeeccCCceeee-cCCC
Q 021291 76 L---NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYH-FCKLSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLC 150 (314)
Q Consensus 76 ~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 150 (314)
| ..++.++.+|.|.++|.++++.+. ........ ...+.....+.. .... .......... ...+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~----~~~~~~~~~~~~~d~~g~~~~-----~~~~---~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFIS----AKNFVPVNWASGYDKHGKPIG-----IAAA---RDGSKPQDAVPGPYG 391 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEE----EEESSCCSSEEEECTTSCEEE-----CGGG---GCTTSCEECSSCTTC
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEec----cccccccCcccccCCCCceee-----cccc---CcCCCccEECcCccc
Confidence 6 678999999999999999997643 22221110 000000000000 0000 0000000000 0011
Q ss_pred CCC---ceeccCCCceEEEeec-----------------------------------------CcCeEEEEecCCCceee
Q 021291 151 DSK---DDVPAEGPKYMAVAGE-----------------------------------------QLSEVEIWDLNTAERCT 186 (314)
Q Consensus 151 ~~~---~~~~~~~~~~~~~~g~-----------------------------------------~d~~i~vwd~~~~~~~~ 186 (314)
... ++++|+...+++.+.. ..+.|..||+.+++.+-
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 111 6677776655442210 12789999999999887
Q ss_pred eecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCC-cceEEEEEeCCCC
Q 021291 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL-EPVLCLSIDESCN 265 (314)
Q Consensus 187 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 265 (314)
+++. + .+..+ .. +.++ +. +++.++.||.+++||.++ ++.+..+.... ....-+.|..+|+
T Consensus 472 ~~~~-------~--~~~~~----g~-~~~~---g~-~v~~g~~dg~l~a~D~~t-G~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 472 SVEH-------V--SPWNG----GT-LTTA---GN-VVFQGTADGRLVAYHAAT-GEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EEEE-------S--SSCCC----CE-EEET---TT-EEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ecCC-------C--CCCcC----cc-eEeC---CC-EEEEECCCCcEEEEECCC-CceeeeeeCCCCcccCCEEEEeCCE
Confidence 7762 1 11111 11 4443 44 678889999999999999 88888887433 2334456667776
Q ss_pred eE
Q 021291 266 GG 267 (314)
Q Consensus 266 ~l 267 (314)
.+
T Consensus 533 ~~ 534 (677)
T 1kb0_A 533 QY 534 (677)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.79 E-value=4.4e-06 Score=63.51 Aligned_cols=169 Identities=15% Similarity=0.081 Sum_probs=109.1
Q ss_pred eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC--eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeecccccccc
Q 021291 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128 (314)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (314)
+.+.++ .|........+.|++ + .++.+.+.+| .|+.+|+.+++... ...+......
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~-~LyestG~~g~S~v~~vD~~tgkv~~--~~~l~~~~fg---------------- 67 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--G-HLYESTGETGRSSVRKVDLETGRILQ--RAEVPPPYFG---------------- 67 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--T-EEEEEECCTTSCEEEEEETTTCCEEE--EEECCTTCCE----------------
T ss_pred EEEEEc-CCCCccccccEEEEC--C-EEEEECCCCCCceEEEEECCCCCEEE--EEeCCCCcce----------------
Confidence 345555 466556788999986 3 6666767654 89999999997644 2222111111
Q ss_pred CCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceee
Q 021291 129 ANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (314)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 208 (314)
..+.+.++.++.++ -.++.+.+||..+.+.+.+++. ...-+
T Consensus 68 -------------------------eGi~~~~~~ly~lt-w~~~~v~v~D~~tl~~~~ti~~-------------~~~Gw 108 (243)
T 3mbr_X 68 -------------------------AGIVAWRDRLIQLT-WRNHEGFVYDLATLTPRARFRY-------------PGEGW 108 (243)
T ss_dssp -------------------------EEEEEETTEEEEEE-SSSSEEEEEETTTTEEEEEEEC-------------SSCCC
T ss_pred -------------------------eEEEEeCCEEEEEE-eeCCEEEEEECCcCcEEEEEeC-------------CCCce
Confidence 11223456666654 4579999999999999999883 11223
Q ss_pred eEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecC--C---cceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH--L---EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
. +.++ +. .|+.+..++.|.++|..+ .+.+..+... . ..++.+.+. +|+..+..-.+..|.+.|.++
T Consensus 109 g---lt~d---g~-~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 109 A---LTSD---DS-HLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp E---EEEC---SS-CEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred E---EeeC---CC-EEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 3 3334 33 344444588999999998 6777666532 2 245667776 566556665678999999999
Q ss_pred CeeeEe
Q 021291 284 STYVLF 289 (314)
Q Consensus 284 ~~~~~~ 289 (314)
++.+..
T Consensus 180 G~V~~~ 185 (243)
T 3mbr_X 180 GKVVAW 185 (243)
T ss_dssp CBEEEE
T ss_pred CCEEEE
Confidence 887654
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.76 E-value=3.2e-05 Score=60.46 Aligned_cols=207 Identities=6% Similarity=-0.074 Sum_probs=123.0
Q ss_pred CceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEE-eecCCeEEEEeCCCC
Q 021291 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGTVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~ 96 (314)
..+..++|++++. ++++-..++.|.+++.........+.... .....+++.+ ++..|+. -...+.|.++++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~p~~ia~d~--~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--GSPEGIALDH--LGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--CCEEEEEEET--TTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC--CCccEEEEEe--cCCeEEEEECCCCEEEEEEcCCC
Confidence 3567899999654 45555667899999987654433332221 3478999998 6555554 445678999998653
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC-cCeEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ-LSEVE 175 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d~~i~ 175 (314)
.. . .+ ...... .+. .++++|++..++++.... .+.|.
T Consensus 112 ~~-~--~~-~~~~~~-----~P~---------------------------------~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 112 QR-R--VL-FDTGLV-----NPR---------------------------------GIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp SC-E--EE-ECSSCS-----SEE---------------------------------EEEEETTTTEEEEEECCSSSCEEE
T ss_pred CE-E--EE-EECCCC-----Ccc---------------------------------EEEEeeCCCEEEEEECCCCCcEEE
Confidence 21 0 00 000000 000 056888766666543221 36888
Q ss_pred EEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcce
Q 021291 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (314)
Q Consensus 176 vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (314)
.+++... ....+.. . .......++ ++|+ +..++++-...+.|.++|... ......+.. ....
T Consensus 150 ~~~~dg~-~~~~~~~-------~----~~~~P~gia-~d~~---~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P 211 (267)
T 1npe_A 150 TSHMDGT-NRRILAQ-------D----NLGLPNGLT-FDAF---SSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYP 211 (267)
T ss_dssp EEETTSC-CCEEEEC-------T----TCSCEEEEE-EETT---TTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSE
T ss_pred EEecCCC-CcEEEEE-------C----CCCCCcEEE-EcCC---CCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCc
Confidence 8887533 2222221 0 112456676 9886 332566666778999999874 333233332 2344
Q ss_pred EEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
..++.+ ++..+++....+.|.++|..+++.+..+
T Consensus 212 ~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 212 FAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 677776 4445566656789999999998876654
No 243
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.72 E-value=3.4e-05 Score=59.44 Aligned_cols=220 Identities=9% Similarity=0.022 Sum_probs=127.8
Q ss_pred EecCCCCceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEE
Q 021291 13 VLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 91 (314)
.+.|-.+.+..++|+|++..| ++...++.|...|.. ++.++.+..... .....|++.+ ++.++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~--~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIG--DNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECS--TTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeC--CCEEEEEECCCCcEEEE
Confidence 455666789999999976544 557778899999987 888887753221 2377888888 87766666667889999
Q ss_pred eCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCc
Q 021291 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (314)
++.....+. ...... +.....+ .-.+-.+++|+|.++.++++....-
T Consensus 97 ~v~~~~~i~----~~~~~~-----~~~~~~~------------------------~N~g~EGLA~d~~~~~L~va~E~~p 143 (255)
T 3qqz_A 97 SLTPNSEVK----ILKKIK-----IPLQESP------------------------TNCGFEGLAYSRQDHTFWFFKEKNP 143 (255)
T ss_dssp EECTTCCEE----EEEEEE-----CCCSSCC------------------------CSSCCEEEEEETTTTEEEEEEESSS
T ss_pred EcCCCCeee----eeeeec-----ccccccc------------------------ccCCcceEEEeCCCCEEEEEECcCC
Confidence 887653211 000000 0000000 0000011889999988887554422
Q ss_pred CeEEEEecC-CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec
Q 021291 172 SEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (314)
Q Consensus 172 ~~i~vwd~~-~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (314)
..|+.|+-. ....+..+..... .... ...-..+++ |+|. .++ +++....++.|.++|.. ++++..+.-
T Consensus 144 ~~i~~~~g~~~~~~l~i~~~~~~----~~~~-~~~d~S~l~-~dp~--tg~-lliLS~~s~~L~~~d~~--g~~~~~~~L 212 (255)
T 3qqz_A 144 IEVYKVNGLLSSNELHISKDKAL----QRQF-TLDDVSGAE-FNQQ--KNT-LLVLSHESRALQEVTLV--GEVIGEMSL 212 (255)
T ss_dssp EEEEEEESTTCSSCCEEEECHHH----HHTC-CSSCCCEEE-EETT--TTE-EEEEETTTTEEEEECTT--CCEEEEEEC
T ss_pred ceEEEEcccccCCceeeecchhh----cccc-ccCCceeEE-EcCC--CCe-EEEEECCCCeEEEEcCC--CCEEEEEEc
Confidence 255555510 1111111110000 0000 011345666 9997 255 77777788899999977 556655542
Q ss_pred CC---------cceEEEEEeCCCCeEEEecCCCcEEEEec
Q 021291 251 HL---------EPVLCLSIDESCNGGISGGADQKIVLYNL 281 (314)
Q Consensus 251 h~---------~~v~~~~~~~~~~~l~s~s~dg~i~iw~~ 281 (314)
.. ..-..|+|+++|++.++ |..+.++.+.-
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 21 25689999999985555 66666666543
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.72 E-value=2e-06 Score=76.82 Aligned_cols=214 Identities=11% Similarity=0.069 Sum_probs=119.5
Q ss_pred EEEEccCCCEEEEecCCCe-------------------EEEEeCCCCeEEEEEeccCCc-------ccEEEEEEcccCCC
Q 021291 23 DVCFHQTKPILFAGTTGGE-------------------LRIWDTVQHRTVSSSWVHSAA-------HGIVSVATGPSIGL 76 (314)
Q Consensus 23 ~~~~~~~~~~l~s~~~dg~-------------------v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~ 76 (314)
.++++|++.+++.++.++. |..+|.++|+.+..++...+. .++....... ++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~--~G 316 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI--DG 316 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TT
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc--CC
Confidence 6889998889999888764 999999999999888753211 1122222223 44
Q ss_pred C---eEEEeecCCeEEEEeCCCCCCCCCCeeeeecceee-EEEeeee-eccccccccCCCCcceeeccCCc-eeee-cCC
Q 021291 77 N---KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYH-FCKLSLV-KEPYANAKQANEPKDCYEREVGE-TVDT-DSL 149 (314)
Q Consensus 77 ~---~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 149 (314)
+ .++.++.+|.++++|.++++.+. ........ ...+... ..+..... ..+.....+ .... ...
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~----~~~~~~~~w~~~~~~~~~~pi~~~~------~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLS----AKGIVPQSWTKGMDMKTGRPILDEE------NAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEE----EEESSCCSSEEEEETTTTEEEECHH------HHCTTTSSSCEEESSCTT
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEec----cccccccccccccCccCCCcccchh------hccccCCCCeeEeCCCcc
Confidence 4 78899999999999999998643 11111100 0000000 00000000 000000000 0000 000
Q ss_pred CCCC---ceeccCCCceEEEee-------------------------------------------cCcCeEEEEecCCCc
Q 021291 150 CDSK---DDVPAEGPKYMAVAG-------------------------------------------EQLSEVEIWDLNTAE 183 (314)
Q Consensus 150 ~~~~---~~~~~~~~~~~~~~g-------------------------------------------~~d~~i~vwd~~~~~ 183 (314)
+... ++++|+...+++.+. ..+|.|..||+.+++
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~ 466 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ 466 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC
Confidence 1101 556665543333211 014889999999999
Q ss_pred eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCc-ceEEEEEeC
Q 021291 184 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE-PVLCLSIDE 262 (314)
Q Consensus 184 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~~~ 262 (314)
.+-+++. +.. ..+. . +... +. +++.|+.||.|+.||.++ ++.+.+++.... ...-+.|..
T Consensus 467 ~~W~~~~--------~~~-~~~g----~-~~ta---gg-lvf~gt~dg~l~a~D~~t-G~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 467 AAWEVPY--------VTI-FNGG----T-LSTA---GN-LVFEGSADGRVIAYAADT-GEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEE--------SSS-CCCC----E-EEET---TT-EEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEE
T ss_pred eEeEccC--------CCC-ccCc----c-ceEC---CC-EEEEECCCCcEEEEECCC-CccceeeeCCCCcccCceEEEE
Confidence 8877762 211 1111 1 4433 34 788899999999999999 888888774432 224466777
Q ss_pred CCCeE
Q 021291 263 SCNGG 267 (314)
Q Consensus 263 ~~~~l 267 (314)
+|+..
T Consensus 528 ~G~qy 532 (689)
T 1yiq_A 528 DGEQY 532 (689)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77643
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=3.5e-05 Score=62.09 Aligned_cols=214 Identities=11% Similarity=0.024 Sum_probs=120.0
Q ss_pred EecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccC------------------CcccEEEEEEcccC
Q 021291 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS------------------AAHGIVSVATGPSI 74 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~ 74 (314)
.+.+.-....+++|++++++++++..++.|..|+..+++.. .+.... ....+..+++.+
T Consensus 13 ~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-- 89 (322)
T 2fp8_A 13 LIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-- 89 (322)
T ss_dssp EEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET--
T ss_pred ecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC--
Confidence 34444455678999999987888889999999998765433 232110 002378899986
Q ss_pred CCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCc
Q 021291 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKD 154 (314)
Q Consensus 75 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
+...|+.+...+.|..+|..++.... ....... ... ..+. ++
T Consensus 90 ~~g~l~v~d~~~~i~~~d~~~g~~~~--~~~~~~~-~~~--~~p~---------------------------------~i 131 (322)
T 2fp8_A 90 QNNQLYIVDCYYHLSVVGSEGGHATQ--LATSVDG-VPF--KWLY---------------------------------AV 131 (322)
T ss_dssp TTTEEEEEETTTEEEEECTTCEECEE--EESEETT-EEC--SCEE---------------------------------EE
T ss_pred CCCcEEEEECCCCEEEEeCCCCEEEE--ecccCCC-Ccc--cccc---------------------------------eE
Confidence 44566666555668888877553210 0000000 000 0000 04
Q ss_pred eecc-CCCceEEEeec----------------CcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCC
Q 021291 155 DVPA-EGPKYMAVAGE----------------QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (314)
Q Consensus 155 ~~~~-~~~~~~~~~g~----------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~ 217 (314)
++.+ +|. ++++... .++.|..||..+++...... . ......++ ++|+
T Consensus 132 ~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--------~-----~~~p~gia-~~~d- 195 (322)
T 2fp8_A 132 TVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--------E-----LHVPGGAE-VSAD- 195 (322)
T ss_dssp EECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--------E-----ESCCCEEE-ECTT-
T ss_pred EEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--------C-----CccCcceE-ECCC-
Confidence 4667 664 3332211 23678899987665432222 0 11233455 9987
Q ss_pred CCCceEEEEeecCCcEEEEEccCCC-CceEeeecCCcceEEEEEeCCCCeEEEecC----------CCcEEEEecCCCee
Q 021291 218 SQGFVNVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHSTY 286 (314)
Q Consensus 218 ~~g~~~l~~g~~dg~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----------dg~i~iw~~~~~~~ 286 (314)
|+.++++-..++.|.+|++.... .....+..... ...++++++|++.++... .+.|..+|.+ ++.
T Consensus 196 --g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~ 271 (322)
T 2fp8_A 196 --SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI 271 (322)
T ss_dssp --SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE
T ss_pred --CCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCE
Confidence 55244555667899999987411 11122221223 788999999986666544 4567777764 443
Q ss_pred e
Q 021291 287 V 287 (314)
Q Consensus 287 ~ 287 (314)
+
T Consensus 272 ~ 272 (322)
T 2fp8_A 272 L 272 (322)
T ss_dssp E
T ss_pred E
Confidence 3
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.69 E-value=3.8e-06 Score=67.81 Aligned_cols=217 Identities=12% Similarity=-0.017 Sum_probs=120.6
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecc
Q 021291 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (314)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 109 (314)
+..|..++.++.|..+|.. ++.......... .+.++...+ ++ .++.++.++.|..+|.. ++... .....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~--~~~~~~~~~--~g-~l~vgt~~~~l~~~d~~-g~~~~----~~~~~ 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKA--IYATPIVSE--DG-TIYVGSNDNYLYAINPD-GTEKW----RFKTN 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSC--CCSCCEECT--TS-CEEEECTTSEEEEECTT-SCEEE----EEECS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc--eeeeeEEcC--CC-EEEEEcCCCEEEEECCC-CCEeE----EEecC
Confidence 4467778889999999988 777766655442 356666666 54 46677888999999998 65322 22111
Q ss_pred eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCC---ceeccCCCceEEEeecCcCeEEEEecCCCceee
Q 021291 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 186 (314)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~ 186 (314)
................... .....++ ..+............ +...++|. +++ ++.++.|..+|. +++.+.
T Consensus 176 ~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v--~t~~~gl~~~~~-~g~~~~ 248 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYV--TSLDGHLYAINP-DGTEKW 248 (330)
T ss_dssp SCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEE--EETTTEEEEECT-TSCEEE
T ss_pred CCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEE--EcCCCeEEEECC-CCCEeE
Confidence 1110001111111111111 2223333 222222211111111 55666664 443 344678888884 555555
Q ss_pred eecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCe
Q 021291 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 266 (314)
Q Consensus 187 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 266 (314)
.+.. . ......+. +.++ + .|..++.+|.|..+|. + ++.+..+......+.++..+.++.
T Consensus 249 ~~~~--------~----~~~~~~~~-~~~~---g--~l~v~t~~ggl~~~d~-~-g~~~~~~~~~~~~~~~~~~d~~g~- 307 (330)
T 3hxj_A 249 RFKT--------G----KRIESSPV-IGNT---D--TIYFGSYDGHLYAINP-D-GTEKWNFETGSWIIATPVIDENGT- 307 (330)
T ss_dssp EEEC--------S----SCCCSCCE-ECTT---S--CEEEECTTCEEEEECT-T-SCEEEEEECSSCCCSCCEECTTCC-
T ss_pred EeeC--------C----CCccccce-EcCC---C--eEEEecCCCCEEEECC-C-CcEEEEEEcCCccccceEEcCCCE-
Confidence 5542 1 11122232 4433 4 4777888889999996 4 666666665556677888888886
Q ss_pred EEEecCCCcEEEEecCCCe
Q 021291 267 GISGGADQKIVLYNLDHST 285 (314)
Q Consensus 267 l~s~s~dg~i~iw~~~~~~ 285 (314)
|..++.+|.+++...+..+
T Consensus 308 l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEECTTSCEEEEEC----
T ss_pred EEEEcCCCeEEEEeccccc
Confidence 5668899999998766543
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=7.8e-05 Score=59.60 Aligned_cols=233 Identities=7% Similarity=-0.022 Sum_probs=123.7
Q ss_pred CceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-C-
Q 021291 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-G- 86 (314)
Q Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g- 86 (314)
+.+..+... .....++|+++++++++-..++.|..||.+. +....+.. . .....+++.+ +++++++.... +
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~--~~p~gia~~~--dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-E--GKVSGLAFTS--NGDLVATGWNADSI 95 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-S--SEEEEEEECT--TSCEEEEEECTTSC
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-C--CCceeEEEcC--CCcEEEEeccCCcc
Confidence 344455432 5678899999999888877889999999765 44333332 2 3488999999 88865554332 2
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc---eee---e-----cCCCC-CC-
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE---TVD---T-----DSLCD-SK- 153 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~-----~~~~~-~~- 153 (314)
.|..+|..+++... .......... .......... ..........++.+.... .+. . ..... ..
T Consensus 96 ~v~~~d~~~g~~~~--~~~~~~~~~~-~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 96 PVVSLVKSDGTVET--LLTLPDAIFL-NGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEEEECTTSCEEE--EEECTTCSCE-EEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred eEEEEcCCCCeEEE--EEeCCCcccc-CcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 47777777765321 1111111100 0000000000 011111223444443221 111 0 00011 11
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCC-Cce--eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~-~~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
..++++++.+++ +-...+.|..||+.. ++. ...+.. ......++ ++++ |+ ++++....
T Consensus 172 ngis~dg~~lyv-~d~~~~~I~~~~~~~~g~~~~~~~~~~-------------~~~P~gi~-vd~d---G~-l~va~~~~ 232 (306)
T 2p4o_A 172 NGLKRFGNFLYV-SNTEKMLLLRIPVDSTDKPGEPEIFVE-------------QTNIDDFA-FDVE---GN-LYGATHIY 232 (306)
T ss_dssp EEEEEETTEEEE-EETTTTEEEEEEBCTTSCBCCCEEEEE-------------SCCCSSEE-EBTT---CC-EEEECBTT
T ss_pred CCcCcCCCEEEE-EeCCCCEEEEEEeCCCCCCCccEEEec-------------cCCCCCeE-ECCC---CC-EEEEeCCC
Confidence 223788877765 455578999999874 321 111110 01233344 7776 65 66666667
Q ss_pred CcEEEEEccCCCCce--EeeecCCcceEEEEEe---CCCCeEEEecCC
Q 021291 231 GSILVWDIRNPGIPL--TAMKVHLEPVLCLSID---ESCNGGISGGAD 273 (314)
Q Consensus 231 g~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~---~~~~~l~s~s~d 273 (314)
+.|.++|.. ++.. ..+.......++++|. +++..|+..+..
T Consensus 233 ~~V~~~~~~--G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 NSVVRIAPD--RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CCEEEECTT--CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CeEEEECCC--CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 889999975 4442 2333333568999998 786666544433
No 248
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.64 E-value=9.5e-06 Score=64.90 Aligned_cols=178 Identities=13% Similarity=0.036 Sum_probs=103.6
Q ss_pred ccEEEEEEcccCCCC-eEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCC
Q 021291 63 HGIVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (314)
Q Consensus 63 ~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (314)
.......|+| +++ ++++...++.|..|+. +++. . .+...... ...
T Consensus 45 ~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~-~g~~-~--~~~~~~~~-~~g--------------------------- 90 (305)
T 3dr2_A 45 TWSEGPAWWE--AQRTLVWSDLVGRRVLGWRE-DGTV-D--VLLDATAF-TNG--------------------------- 90 (305)
T ss_dssp SSEEEEEEEG--GGTEEEEEETTTTEEEEEET-TSCE-E--EEEESCSC-EEE---------------------------
T ss_pred cCccCCeEeC--CCCEEEEEECCCCEEEEEeC-CCCE-E--EEeCCCCc-cce---------------------------
Confidence 3478899999 887 5667777899999988 3431 1 11111110 000
Q ss_pred ceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCc
Q 021291 142 ETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (314)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~ 221 (314)
++++++|+ +++ +...++.|.+||.. ++. ..+.. .........+..+. ++|+ |+
T Consensus 91 ------------l~~d~dG~-l~v-~~~~~~~v~~~~~~-g~~-~~~~~-------~~~~~~~~~~~~i~-~d~d---G~ 143 (305)
T 3dr2_A 91 ------------NAVDAQQR-LVH-CEHGRRAITRSDAD-GQA-HLLVG-------RYAGKRLNSPNDLI-VARD---GA 143 (305)
T ss_dssp ------------EEECTTSC-EEE-EETTTTEEEEECTT-SCE-EEEEC-------EETTEECSCCCCEE-ECTT---SC
T ss_pred ------------eeECCCCC-EEE-EECCCCEEEEECCC-CCE-EEEEe-------ccCCCccCCCCCEE-ECCC---CC
Confidence 55788886 443 34435789999986 543 22221 00000112344565 8887 65
Q ss_pred eEEEE----eec-------------CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCC------CcEEE
Q 021291 222 VNVLA----GYE-------------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD------QKIVL 278 (314)
Q Consensus 222 ~~l~~----g~~-------------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d------g~i~i 278 (314)
+.++ |.. .+.|+.||..+ ++..... .....+.++|+|+++.|+.+... +.|.+
T Consensus 144 -l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 144 -IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp -EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEE
T ss_pred -EEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEE
Confidence 5554 332 25677788765 4433322 34567889999999977666554 78999
Q ss_pred EecCCCee----eEe------eeeeeecCCCceecee
Q 021291 279 YNLDHSTY----VLF------GIGFVCDQEGNKFGTT 305 (314)
Q Consensus 279 w~~~~~~~----~~~------~~~~~~~~~~~~~~~~ 305 (314)
|++..+.. ++. ..++..+++|.++...
T Consensus 220 ~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 220 FAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 99876541 110 1256677777655543
No 249
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.60 E-value=9.1e-05 Score=59.79 Aligned_cols=192 Identities=6% Similarity=-0.088 Sum_probs=102.7
Q ss_pred EEEEEEcccCCCC-eEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCce
Q 021291 65 IVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (314)
Q Consensus 65 v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (314)
..+..|+| +++ ++++...++.|..||..+++.. .+... .......+...+. ..... ......++...+..
T Consensus 51 ~egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~~~-~~v~~i~~~~dg~--l~v~~-~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDP--ASGTAWWFNILERELHELHLASGRKT---VHALP-FMGSALAKISDSK--QLIAS-DDGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEET--TTTEEEEEEGGGTEEEEEETTTTEEE---EEECS-SCEEEEEEEETTE--EEEEE-TTEEEEEETTTCCE
T ss_pred CcCCeEeC--CCCEEEEEECCCCEEEEEECCCCcEE---EEECC-CcceEEEEeCCCe--EEEEE-CCCEEEEECCCCcE
Confidence 56788998 644 5556667889999999876431 11111 1122222222211 11111 12233344433332
Q ss_pred eee-cCC-CCCC-----ceeccCCCceEEEeec-----CcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEE
Q 021291 144 VDT-DSL-CDSK-----DDVPAEGPKYMAVAGE-----QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (314)
Q Consensus 144 ~~~-~~~-~~~~-----~~~~~~~~~~~~~~g~-----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 211 (314)
... ... .... ++++|+|+. ++.+.. ..+.|..+| +++.. .+.. . ......+.
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~--------~----~~~~~~i~ 185 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVT-KLFA--------D----ISIPNSIC 185 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEE-EEEE--------E----ESSEEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEE-EeeC--------C----CcccCCeE
Confidence 211 111 1111 788999874 433321 124566666 44432 2221 1 11344566
Q ss_pred EecCCCCCCceEEEEeecCCcEEEEEcc--CCC-Cc-----eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 212 AYLPSKSQGFVNVLAGYEDGSILVWDIR--NPG-IP-----LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 212 ~~~p~~~~g~~~l~~g~~dg~i~vwd~~--~~~-~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
|+|+ |+.++++...++.|.+||+. + + .. +..+......+..++++++|.+.++...++.|.+|+.+
T Consensus 186 -~s~d---g~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~- 259 (326)
T 2ghs_A 186 -FSPD---GTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD- 259 (326)
T ss_dssp -ECTT---SCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-
T ss_pred -EcCC---CCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-
Confidence 9998 55344555667899999986 4 3 21 22222334567889999999877776667889999984
Q ss_pred Ceee
Q 021291 284 STYV 287 (314)
Q Consensus 284 ~~~~ 287 (314)
++.+
T Consensus 260 g~~~ 263 (326)
T 2ghs_A 260 GNHI 263 (326)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 4443
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.58 E-value=1.2e-06 Score=70.82 Aligned_cols=237 Identities=9% Similarity=-0.031 Sum_probs=124.3
Q ss_pred CCceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCe
Q 021291 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (314)
++++..+..+.....+.....++ .|..++.++.|..|| .+++.+....... ..+.++...+ ++ .++.++.+
T Consensus 9 g~~~W~~~~~~~~~~~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~--~g-~l~v~t~~-- 79 (330)
T 3hxj_A 9 CKIKWEFLIGNSIDSSPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGE--IIECRPSIGK--DG-TIYFGSDK-- 79 (330)
T ss_dssp ---CCTTTSCEEECCCCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGG--EEEECCEETT--TT-EECCSSCE--
T ss_pred ceEEEEEeCCCCcccCceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCC--CcccceEEec--CC-cEEEecCc--
Confidence 34444444444334455565566 566778888899999 8888766554433 3366777766 54 45555555
Q ss_pred EEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeee-cCCCCCC--ceeccCCCceE
Q 021291 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLCDSK--DDVPAEGPKYM 164 (314)
Q Consensus 88 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~ 164 (314)
|..+|. +++.... +........... .. ..........+....++.. +..... ....... +...+++. ++
T Consensus 80 l~~~d~-~g~~~~~--~~~~~~~~~~~~--~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~ 151 (330)
T 3hxj_A 80 VYAINP-DGTEKWR--FDTKKAIVSDFT--IF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IY 151 (330)
T ss_dssp EEEECC-CGGGGGG--SCC-----CCEE--EE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EE
T ss_pred EEEECC-CCcEEEE--EECCCCcccCce--EE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EE
Confidence 888886 5543321 111111000011 11 1111111112222333333 222211 1111111 44555654 44
Q ss_pred EEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
+ ++.++.|..||.. ++....+.. . ...+.++. ..++ |. +..++ +.|..+| .+ ++.
T Consensus 152 v--gt~~~~l~~~d~~-g~~~~~~~~--------~----~~~~~~~~-~d~~---g~--l~v~t--~~l~~~d-~~-g~~ 206 (330)
T 3hxj_A 152 V--GSNDNYLYAINPD-GTEKWRFKT--------N----DAITSAAS-IGKD---GT--IYFGS--DKVYAIN-PD-GTE 206 (330)
T ss_dssp E--ECTTSEEEEECTT-SCEEEEEEC--------S----SCCCSCCE-ECTT---CC--EEEES--SSEEEEC-TT-SCE
T ss_pred E--EcCCCEEEEECCC-CCEeEEEec--------C----CCceeeeE-EcCC---CE--EEEEe--CEEEEEC-CC-CcE
Confidence 3 5556899999998 776655552 1 11233333 5444 44 44454 7899999 55 666
Q ss_pred eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+.........+.++..++++. |..++.++.|..++. +++.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~ 248 (330)
T 3hxj_A 207 KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKW 248 (330)
T ss_dssp EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEE
T ss_pred EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeE
Confidence 666665556788888888876 555666777888874 444444
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=1.1e-05 Score=72.87 Aligned_cols=198 Identities=11% Similarity=0.007 Sum_probs=106.7
Q ss_pred ceeEEEEc-cCCCEEEEec-----CCCeEEEEeCCCC-eEEEE-EeccCCcccEEEEEEcccCCCCeEEEeecC-----C
Q 021291 20 SVTDVCFH-QTKPILFAGT-----TGGELRIWDTVQH-RTVSS-SWVHSAAHGIVSVATGPSIGLNKVISQGRD-----G 86 (314)
Q Consensus 20 ~v~~~~~~-~~~~~l~s~~-----~dg~v~iwd~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g 86 (314)
.+...+|| |||++||-+. ...+|+++|+.++ +.+.. +. .....++|+| |++.|+....| .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-----~~~~~~~Wsp--Dg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-----GTNGEIVWGP--DHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-----EECSCCEECS--STTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-----CceeeEEEec--CCCEEEEEEECCCCCCC
Confidence 67789999 9999887432 2235999999988 63211 11 1134688999 98888776665 2
Q ss_pred eEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEE
Q 021291 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (314)
Q Consensus 87 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
.|.++++.++......++......... . ..|+|||+.+++.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~---~------------------------------------~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSA---F------------------------------------MYKAADTNTLCIG 288 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEE---E------------------------------------EEECTTSSEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEE---E------------------------------------EEECCCCCEEEEE
Confidence 577777766532110011100000000 0 4599999988775
Q ss_pred eec-CcCeEEEEecCCCc-ee--eeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC----CcEEEEEc
Q 021291 167 AGE-QLSEVEIWDLNTAE-RC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWDI 238 (314)
Q Consensus 167 ~g~-~d~~i~vwd~~~~~-~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----g~i~vwd~ 238 (314)
+.. ....|.++|+.++. .. ..+.. .. ....+++. |+. |..+++....+ ..|..+|+
T Consensus 289 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~-------~~----~~~~~s~~-~~~----g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 289 SQSPETAEVHLLDLRKGNAHNTLEIVRP-------RE----KGVRYDVQ-MHG----TSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EECSSCEEEEEEESSSCTTCCCEEESSC-------CC----TTCCEEEE-EET----TTEEEEEECTTTCTTCEEEEEET
T ss_pred ecCCCCceEEEEECCCCCCCceeEEeec-------CC----CCceEEEe-eee----CCEEEEEeCCCCCCCcEEEEEcC
Confidence 533 23568889988753 22 33321 11 22333332 332 33244444443 35667776
Q ss_pred cCCCCceEe-eecCCc--ceEEEEEeCCCCeEEEecCCCcEE--EEec
Q 021291 239 RNPGIPLTA-MKVHLE--PVLCLSIDESCNGGISGGADQKIV--LYNL 281 (314)
Q Consensus 239 ~~~~~~~~~-~~~h~~--~v~~~~~~~~~~~l~s~s~dg~i~--iw~~ 281 (314)
.++ ..... +..+.. .+..+.+.. +.++++...++..+ ++++
T Consensus 353 ~~~-~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQP-SDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TST-TCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEEC
T ss_pred CCc-ccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEec
Confidence 642 22222 333333 455666653 34556777777644 4554
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.45 E-value=3.9e-05 Score=66.88 Aligned_cols=60 Identities=10% Similarity=-0.094 Sum_probs=42.4
Q ss_pred cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
.+|.|..||..+ ++.+.++... ..+....+...+..++.++.||.|+.||.++++.++..
T Consensus 442 ~~g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 442 EMGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CCEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCC-CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 357899999998 7777666532 22333333333446777899999999999999998864
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.40 E-value=0.00056 Score=56.57 Aligned_cols=206 Identities=6% Similarity=-0.109 Sum_probs=119.6
Q ss_pred CceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEeCCCC
Q 021291 19 ASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~ 96 (314)
..+..++|++. +.++++-...+.|..++.+.......+.... .....+++.+ .+..| ++-...+.|.+.++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~--~~p~glavd~--~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL--ESPGGLAVDW--VHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC--SCCCCEEEET--TTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC--CCccEEEEEe--CCCeEEEEcCCCCeEEEEeCCCC
Confidence 45678999974 4455566677899999987655433332222 2256788876 44444 45555678888887654
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCc-CeEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-SEVE 175 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~ 175 (314)
... . ........ +. ++++.|.+..++.+ -..+ +.|.
T Consensus 192 ~~~---~-l~~~~l~~-----P~---------------------------------giavdp~~g~ly~t-d~~~~~~I~ 228 (386)
T 3v65_B 192 HRK---V-LLWQSLEK-----PR---------------------------------AIALHPMEGTIYWT-DWGNTPRIE 228 (386)
T ss_dssp SCE---E-EECSSCSC-----EE---------------------------------EEEEETTTTEEEEE-ECSSSCEEE
T ss_pred ceE---E-eecCCCCC-----Cc---------------------------------EEEEEcCCCeEEEe-ccCCCCEEE
Confidence 211 1 11100000 00 05677777766654 3334 7888
Q ss_pred EEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcce
Q 021291 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (314)
Q Consensus 176 vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (314)
.+++........... .-.....++ ++|++ ++ ++++-...+.|..+|+.. ......+.......
T Consensus 229 r~~~dG~~~~~~~~~------------~~~~PnGla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P 291 (386)
T 3v65_B 229 ASSMDGSGRRIIADT------------HLFWPNGLT-IDYAG--RR-MYWVDAKHHVIERANLDG-SHRKAVISQGLPHP 291 (386)
T ss_dssp EEETTSCSCEEEECS------------SCSCEEEEE-EEGGG--TE-EEEEETTTTEEEEECTTS-CSCEEEECSSCSSE
T ss_pred EEeCCCCCcEEEEEC------------CCCCeeeEE-EeCCC--CE-EEEEECCCCEEEEEeCCC-CeeEEEEECCCCCc
Confidence 888764332222221 122456676 98862 33 566666778899999874 33333333334456
Q ss_pred EEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
..|++.. +..+++-...+.|..++..+++.+..
T Consensus 292 ~giav~~-~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 292 FAITVFE-DSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEEEET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred eEEEEEC-CEEEEeeCCCCeEEEEECCCCcceEE
Confidence 7888854 45566777788899998666665444
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.39 E-value=0.00018 Score=63.99 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=55.9
Q ss_pred eEEEEccCCCEEEEecCCCe-------------------EEEEeCCCCeEEEEEeccCCc-------ccEEEEEEcccCC
Q 021291 22 TDVCFHQTKPILFAGTTGGE-------------------LRIWDTVQHRTVSSSWVHSAA-------HGIVSVATGPSIG 75 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~dg~-------------------v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 75 (314)
..+++.++..+++.++.++. |..+|.++|+.+..++...+. .+.....+.. +
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~--~ 310 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--D 310 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--T
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc--C
Confidence 35788888888888887763 999999999999888753211 1233333333 5
Q ss_pred CC---eEEEeecCCeEEEEeCCCCCCC
Q 021291 76 LN---KVISQGRDGTVKCWDIENGGLS 99 (314)
Q Consensus 76 ~~---~l~s~~~dg~v~iwd~~~~~~~ 99 (314)
++ .++.++.+|.+.++|..+++.+
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 44 6889999999999999999764
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.32 E-value=0.00018 Score=64.02 Aligned_cols=211 Identities=15% Similarity=0.088 Sum_probs=122.5
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcc--------cE-EEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCC
Q 021291 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--------GI-VSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100 (314)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 100 (314)
+..|+.++.++.|.-+|..+|+.+.++....... .+ ..+++ .+..++.++.|+.|..+|..+++.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL----WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE----EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE----ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 4567778889999999999999998886432110 00 11223 23678888899999999999998654
Q ss_pred CCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec----CcCeEEE
Q 021291 101 NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE----QLSEVEI 176 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~d~~i~v 176 (314)
........ ........ ..+ .+..+++.++. .++.|..
T Consensus 142 ----~~~~~~~~-~~~~~~~~--------------------------------P~v--~~~~v~vg~~~~~~~~~g~v~a 182 (668)
T 1kv9_A 142 ----SQQTTDPA-KPYSITGA--------------------------------PRV--VKGKVIIGNGGAEYGVRGFVSA 182 (668)
T ss_dssp ----EEECSCTT-SSCBCCSC--------------------------------CEE--ETTEEEECCBCTTTCCBCEEEE
T ss_pred ----eeccCCCC-CcceecCC--------------------------------CEE--ECCEEEEeCCCCCcCCCCEEEE
Confidence 22211000 00000000 001 12233332221 2589999
Q ss_pred EecCCCceeeeecccccCCCCCcCC-------C-----------CCcee-eeEEEecCCCCCCceEEEEeecCC------
Q 021291 177 WDLNTAERCTRLHQNSCGGSPNFSS-------K-----------GRGMC-MAVQAYLPSKSQGFVNVLAGYEDG------ 231 (314)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~h~~-------~-----------~~~~~-~~~~~~~p~~~~g~~~l~~g~~dg------ 231 (314)
+|.++++.+-.+............. + ..+.+ ..+. +.|+ +. .++.+..++
T Consensus 183 ~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a-~d~~---~~-~vy~~~~~g~~w~~~ 257 (668)
T 1kv9_A 183 YDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMA-YDPE---LD-LLYVGTGNGSPWNRE 257 (668)
T ss_dssp EETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEE-EETT---TT-EEEEECCCEESSCHH
T ss_pred EECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceE-EcCC---CC-EEEEeCCCCCccccC
Confidence 9999999887765210000000000 0 00011 1233 7776 33 677776665
Q ss_pred -------------cEEEEEccCCCCceEeeec--CC-------cceEEEEEeCCCC---eEEEecCCCcEEEEecCCCee
Q 021291 232 -------------SILVWDIRNPGIPLTAMKV--HL-------EPVLCLSIDESCN---GGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 232 -------------~i~vwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~s~dg~i~iw~~~~~~~ 286 (314)
.|..+|.++ ++.+..++. |. .+.....+..+|+ .|+.++.+|.++++|..+++.
T Consensus 258 ~~~~~~gd~l~~~~v~AlD~~t-G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 258 VRSPGGGDNLYLSSILAIRPDT-GKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHSTTCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCceeeeeEEEEcCCC-CceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 399999998 887766653 22 2333333334554 689999999999999999998
Q ss_pred eEe
Q 021291 287 VLF 289 (314)
Q Consensus 287 ~~~ 289 (314)
+..
T Consensus 337 l~~ 339 (668)
T 1kv9_A 337 ISA 339 (668)
T ss_dssp EEE
T ss_pred ecc
Confidence 843
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.32 E-value=0.00012 Score=64.08 Aligned_cols=60 Identities=12% Similarity=-0.079 Sum_probs=40.8
Q ss_pred cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
.+|.|..||+.+ ++.+-+... ..++..-.....+.+++.++.||.++.||.++++.++..
T Consensus 451 ~~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 451 GLGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcCeEEEEECCC-CCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 347899999988 776665542 122221112223446777999999999999999999864
No 257
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.27 E-value=0.00096 Score=53.55 Aligned_cols=197 Identities=13% Similarity=0.152 Sum_probs=107.7
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEccc--CCCC---eEEEeec---CCeEEEEeCC--CCCC
Q 021291 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS--IGLN---KVISQGR---DGTVKCWDIE--NGGL 98 (314)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~---~l~s~~~---dg~v~iwd~~--~~~~ 98 (314)
...+++.....+-+.+||+ +|+.++.+.. ..+..+..-|. ..++ ++++... +++|.+|++. ++++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 3456666667788999999 7899888754 22666666550 0112 2233333 5789999774 3321
Q ss_pred CCCCeeeeecc--eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCcee--ccCCCceEEEeecCcCeE
Q 021291 99 SSNPSLTIKTN--SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV--PAEGPKYMAVAGEQLSEV 174 (314)
Q Consensus 99 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~d~~i 174 (314)
..+... +.... +..-.++|+ ++....+.+.....+|.+
T Consensus 114 -----~~i~~~~~pv~t~---------------------------------~~~pyGlcly~~~~~g~~yafV~~k~G~~ 155 (355)
T 3amr_A 114 -----QSMTDPDHPIATA---------------------------------INEVYGFTLYHSQKTGKYYAMVTGKEGEF 155 (355)
T ss_dssp -----EECSCTTSCEECC---------------------------------CSSCCCEEEEECTTTCCEEEEEECSSSEE
T ss_pred -----eeccccccCcCCC---------------------------------CCCeeEEEEEecCCCCcEEEEEECCCCeE
Confidence 111000 00000 000000445 554443333345557999
Q ss_pred EEEecC-------CCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC----CC
Q 021291 175 EIWDLN-------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP----GI 243 (314)
Q Consensus 175 ~vwd~~-------~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~----~~ 243 (314)
..|++. +.+.+++|.. .+.+-.+. ..+. .. .|+.+-++.-|..++.+-. .+
T Consensus 156 ~q~~l~~~~~g~~~~~lVR~f~l-------------gsq~Egcv-vDd~---~g-~Lyv~eEd~GIw~~da~p~~~~~~~ 217 (355)
T 3amr_A 156 EQYELKADKNGYISGKKVRAFKM-------------NSQTEGMA-ADDE---YG-RLYIAEEDEAIWKFSAEPDGGSNGT 217 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEC-------------SSCEEEEE-EETT---TT-EEEEEETTTEEEEEECSTTSCSCCE
T ss_pred EEEEEEeCCCCcccceEEEEecC-------------CCCcceEE-EcCC---CC-eEEEecccceEEEEeCCcCCCCCce
Confidence 999883 3345666663 12333444 6664 22 7899988877766775521 23
Q ss_pred ceEeee-cC-CcceEEEEE--eCCCC-eEEEec-CCCcEEEEecC-CCee
Q 021291 244 PLTAMK-VH-LEPVLCLSI--DESCN-GGISGG-ADQKIVLYNLD-HSTY 286 (314)
Q Consensus 244 ~~~~~~-~h-~~~v~~~~~--~~~~~-~l~s~s-~dg~i~iw~~~-~~~~ 286 (314)
.+..+. ++ ...+..|++ .++++ +|++++ .+..+.+||.+ +.+.
T Consensus 218 ~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 218 VIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp EEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred EEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 444332 22 236888888 45544 554444 67799999997 4443
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.27 E-value=0.00012 Score=63.90 Aligned_cols=59 Identities=19% Similarity=0.138 Sum_probs=41.7
Q ss_pred CCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+|.|..||+.+ ++.+-+..... ++..-.....+.+++.++.||.++.||.++++.++..
T Consensus 465 ~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 465 VGSLRAMDPVS-GKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp SEEEEEECTTT-CCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cceEEEEECCC-CCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 67899999998 77766655322 2222122223446778999999999999999999864
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.22 E-value=0.0013 Score=53.47 Aligned_cols=243 Identities=5% Similarity=-0.142 Sum_probs=124.5
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCC
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGG 97 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~ 97 (314)
+..+|.+..+++ +|+.+. ...|+..++........+... ..+..++|.+ ..+.|+ +-...+.|..+++....
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~---~~~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNL---ENAIALDFHH--RRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSC---SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCC---CceEEEEEec--cccEEEEEeccCCceEEEecCCCC
Confidence 445666666644 444333 345888888765544433333 3378999997 545555 44457889999988654
Q ss_pred CCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC--CC-CceeccCCCceEEEeecCc-Ce
Q 021291 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC--DS-KDDVPAEGPKYMAVAGEQL-SE 173 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~d-~~ 173 (314)
... +............+....................+............. .. ++++.|.+..++.+ -..+ +.
T Consensus 107 ~~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~t-d~~~~~~ 183 (349)
T 3v64_C 107 VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT-DWGNTPR 183 (349)
T ss_dssp CEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEE-ECSSSCE
T ss_pred ceE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEe-ccCCCCE
Confidence 211 111111111111111111111111111112222222221111111111 11 18888877766654 3334 78
Q ss_pred EEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCc
Q 021291 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE 253 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~ 253 (314)
|..+++.... ...+.. . .-.....++ ++|++ +. +.++-...+.|..+|++. ......+.....
T Consensus 184 I~r~~~dG~~-~~~~~~-------~----~~~~PnGla-~d~~~--~~-lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~ 246 (349)
T 3v64_C 184 IEASSMDGSG-RRIIAD-------T----HLFWPNGLT-IDYAG--RR-MYWVDAKHHVIERANLDG-SHRKAVISQGLP 246 (349)
T ss_dssp EEEEETTSCS-CEESCC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEECSSCS
T ss_pred EEEEeCCCCC-cEEEEE-------C----CCCCcceEE-EeCCC--CE-EEEEECCCCEEEEEeCCC-CceEEEEeCCCC
Confidence 8888876433 222220 0 122456676 99862 33 556666678899999874 332223333344
Q ss_pred ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
....|++. ++..+++-...+.|..++..+++....
T Consensus 247 ~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 247 HPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp SEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEE
Confidence 56788885 445566666778898888666655443
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.21 E-value=0.00099 Score=53.52 Aligned_cols=111 Identities=13% Similarity=-0.013 Sum_probs=65.3
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCc--eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEee---
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--- 228 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~--- 228 (314)
++++++++.+++ +-..++.|.+|++.... ....+.. ..+ ...+. +.++ |..+++...
T Consensus 190 ia~~~dg~~lyv-~d~~~~~I~~~~~~~~~~~~~~~~~~------------~~g-P~gi~-~d~~---G~l~va~~~~~~ 251 (322)
T 2fp8_A 190 AEVSADSSFVLV-AEFLSHQIVKYWLEGPKKGTAEVLVK------------IPN-PGNIK-RNAD---GHFWVSSSEELD 251 (322)
T ss_dssp EEECTTSSEEEE-EEGGGTEEEEEESSSTTTTCEEEEEE------------CSS-EEEEE-ECTT---SCEEEEEEEETT
T ss_pred eEECCCCCEEEE-EeCCCCeEEEEECCCCcCCccceEEe------------CCC-CCCeE-ECCC---CCEEEEecCccc
Confidence 679999886665 34446889999987532 1111210 112 44555 7776 663444332
Q ss_pred ------cCCcEEEEEccCCCCceEeeecCC----cceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 229 ------EDGSILVWDIRNPGIPLTAMKVHL----EPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 229 ------~dg~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
..+.|..+|.. ++.+..+.... ..++.+++. +++++++....+.|.++++....
T Consensus 252 ~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp SSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC----
T ss_pred ccccCCCccEEEEECCC--CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEeccccc
Confidence 14668888864 66666665432 346677764 56666776678889999886443
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.19 E-value=0.0011 Score=57.97 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=50.3
Q ss_pred cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec
Q 021291 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (314)
+|.|.-||+.+++.+-+.+. +. +..+.... . . +. +++.|+.|+.++.||.++ ++.+.+++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-------~~--~~~~g~~~---t--a---gg-lvf~g~~dg~l~A~D~~t-G~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-------HL--PLWAGVLA---T--A---GN-LVFTGTGDGYFKAFDAKS-GKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-------SS--CCCSCCEE---E--T---TT-EEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecC-------CC--CCcccceE---e--C---CC-EEEEECCCCcEEEEECCC-CCEEEEecC
Confidence 58899999999998776652 11 11111111 1 1 33 677799999999999998 888888775
Q ss_pred CCcce-EEEEEeCCCCe
Q 021291 251 HLEPV-LCLSIDESCNG 266 (314)
Q Consensus 251 h~~~v-~~~~~~~~~~~ 266 (314)
....+ .-+.|..+|+.
T Consensus 526 ~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SSCCCSCCEEEEETTEE
T ss_pred CCCcccCceEEEECCEE
Confidence 33221 22566667763
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.17 E-value=0.0013 Score=51.21 Aligned_cols=180 Identities=9% Similarity=0.023 Sum_probs=105.7
Q ss_pred CceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec---CCeEEEEeCC
Q 021291 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR---DGTVKCWDIE 94 (314)
Q Consensus 19 ~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~ 94 (314)
.....+++++++. ++++-...+.|.+++.+............ .....+++.| ++..|+.+.. .+.|..+++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~--~~P~~i~vd~--~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL--VNPRGIVTDP--VRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SSEEEEEEET--TTTEEEEEECCSSSCEEEEEETT
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC--CCccEEEEee--CCCEEEEEECCCCCcEEEEEecC
Confidence 4678999998654 45555667899999986433222222111 3368999999 7676665554 3678888876
Q ss_pred CCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeE
Q 021291 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEV 174 (314)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 174 (314)
.... . .+...... .+.. +++++++..++++ ....+.|
T Consensus 155 g~~~-~----~~~~~~~~----~P~g---------------------------------ia~d~~~~~lyv~-d~~~~~I 191 (267)
T 1npe_A 155 GTNR-R----ILAQDNLG----LPNG---------------------------------LTFDAFSSQLCWV-DAGTHRA 191 (267)
T ss_dssp SCCC-E----EEECTTCS----CEEE---------------------------------EEEETTTTEEEEE-ETTTTEE
T ss_pred CCCc-E----EEEECCCC----CCcE---------------------------------EEEcCCCCEEEEE-ECCCCEE
Confidence 4321 0 01000000 0000 6688888777664 4446899
Q ss_pred EEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCC-c
Q 021291 175 EIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL-E 253 (314)
Q Consensus 175 ~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~-~ 253 (314)
.++|+........+. + ......++ .. . +. ++++...++.|.++|..+ ++.+..+.... .
T Consensus 192 ~~~~~~g~~~~~~~~--------~-----~~~P~gi~-~d-~---~~-lyva~~~~~~v~~~d~~~-g~~~~~i~~g~~~ 251 (267)
T 1npe_A 192 ECLNPAQPGRRKVLE--------G-----LQYPFAVT-SY-G---KN-LYYTDWKTNSVIAMDLAI-SKEMDTFHPHKQT 251 (267)
T ss_dssp EEEETTEEEEEEEEE--------C-----CCSEEEEE-EE-T---TE-EEEEETTTTEEEEEETTT-TEEEEEECCSSCC
T ss_pred EEEecCCCceEEEec--------C-----CCCceEEE-Ee-C---CE-EEEEECCCCeEEEEeCCC-CCceEEEcccccc
Confidence 999987544332222 1 11223443 32 1 33 555655678999999987 77777776433 2
Q ss_pred ceEEEEEeCCCC
Q 021291 254 PVLCLSIDESCN 265 (314)
Q Consensus 254 ~v~~~~~~~~~~ 265 (314)
....+++.|++.
T Consensus 252 ~p~gi~~~~~~~ 263 (267)
T 1npe_A 252 RLYGITIALSQC 263 (267)
T ss_dssp CCCCEEEECSCC
T ss_pred ccceeeecCccC
Confidence 467788877754
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.17 E-value=0.00087 Score=58.62 Aligned_cols=212 Identities=13% Similarity=0.075 Sum_probs=119.9
Q ss_pred CCEEEEecC-CCeEEEEeC-CCCeEEEEEeccCCcc--c-------EEEEEEcccCCCCe----EEEeecCCeEEEEeCC
Q 021291 30 KPILFAGTT-GGELRIWDT-VQHRTVSSSWVHSAAH--G-------IVSVATGPSIGLNK----VISQGRDGTVKCWDIE 94 (314)
Q Consensus 30 ~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~--~-------v~~~~~~~~~~~~~----l~s~~~dg~v~iwd~~ 94 (314)
+..|+.++. ++.|.-+|. .+|+.+.++....... + ...+++.| .+.. ++.++.|+.|.-+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p--~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP--GDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC--CCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe--cCCcceeEEEEEcCCCEEEEEECC
Confidence 446667777 899999999 8999998876443210 0 12345544 3344 8888899999999999
Q ss_pred CCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec-----
Q 021291 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE----- 169 (314)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----- 169 (314)
+++.+. ........ ........ ..+ .+ ..+++ .++
T Consensus 140 TG~~~W----~~~~~~~~-~~~~~~ss--------------------------------P~v-~~-g~V~v-g~~g~e~g 179 (599)
T 1w6s_A 140 TGETVW----KVENSDIK-VGSTLTIA--------------------------------PYV-VK-DKVII-GSSGAELG 179 (599)
T ss_dssp TCCEEE----EEECCCGG-GTCBCCSC--------------------------------CEE-ET-TEEEE-CCBCGGGT
T ss_pred CCCEEE----eecCCCCC-ccceeecC--------------------------------CEE-EC-CEEEE-EecccccC
Confidence 997644 22111000 00000000 001 12 23332 222
Q ss_pred CcCeEEEEecCCCceeeeecccccC------CCCCcCCC-------------------CCceee-eEEEecCCCCCCceE
Q 021291 170 QLSEVEIWDLNTAERCTRLHQNSCG------GSPNFSSK-------------------GRGMCM-AVQAYLPSKSQGFVN 223 (314)
Q Consensus 170 ~d~~i~vwd~~~~~~~~~~~~~~~~------~~~~h~~~-------------------~~~~~~-~~~~~~p~~~~g~~~ 223 (314)
.++.|+-+|.++++.+-++...... +......+ ..+.++ ... +.+. .. +
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a-~d~~---~g-~ 254 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA-YDPG---TN-L 254 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE-EETT---TT-E
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccccee-EeCC---CC-E
Confidence 3689999999999987766531100 00000000 000011 122 5554 22 5
Q ss_pred EEEeecC----------------CcEEEEEccCCCCceEeeecCC----------cceEEEEEe-CCC---CeEEEecCC
Q 021291 224 VLAGYED----------------GSILVWDIRNPGIPLTAMKVHL----------EPVLCLSID-ESC---NGGISGGAD 273 (314)
Q Consensus 224 l~~g~~d----------------g~i~vwd~~~~~~~~~~~~~h~----------~~v~~~~~~-~~~---~~l~s~s~d 273 (314)
++.+..+ +.|..+|.++ ++.+-.++... .++. +... .+| ..++.++.+
T Consensus 255 vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~T-G~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~ 332 (599)
T 1w6s_A 255 IYFGTGNPAPWNETMRPGDNKWTMTIFGRDADT-GEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRN 332 (599)
T ss_dssp EEEECCCCSCSCGGGSCSCCTTSSEEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTT
T ss_pred EEEeCCCCccccCcccCCCccccceEEEEeCCC-CceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCC
Confidence 5555544 3799999998 77776665321 2222 2222 567 467888999
Q ss_pred CcEEEEecCCCeeeEee
Q 021291 274 QKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 274 g~i~iw~~~~~~~~~~~ 290 (314)
|.++++|.++++.++..
T Consensus 333 G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 333 GIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEE
T ss_pred cEEEEEECCCCCEeecc
Confidence 99999999999988753
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.07 E-value=0.0011 Score=57.93 Aligned_cols=210 Identities=13% Similarity=0.103 Sum_probs=116.1
Q ss_pred CCEEEEecC-CCeEEEEeC-CCCeEEEEEeccCCccc--------E-EEEEEcccCCCCeEEEeecCCeEEEEeCCCCCC
Q 021291 30 KPILFAGTT-GGELRIWDT-VQHRTVSSSWVHSAAHG--------I-VSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (314)
Q Consensus 30 ~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~~--------v-~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 98 (314)
+..++.++. ++.|.-+|. .+|+.+..+........ + ..+++ .+..++.++.|+.|..+|..+++.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY----GAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE----ECCEEEEEeCCCEEEEEECCCCCE
Confidence 446666677 899999999 89999988754321100 0 11222 246788888899999999999976
Q ss_pred CCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec----CcCeE
Q 021291 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE----QLSEV 174 (314)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~d~~i 174 (314)
+. ........ ........ ..+ .+..+++.+.. .++.|
T Consensus 138 ~W----~~~~~~~~-~~~~~~~~--------------------------------P~v--~~g~v~vg~~~~~~~~~g~v 178 (571)
T 2ad6_A 138 NW----EVEVCDPK-VGSTLTQA--------------------------------PFV--AKDTVLMGCSGAELGVRGAV 178 (571)
T ss_dssp EE----EEECCCGG-GTCBCCSC--------------------------------CEE--ETTEEEEECBCGGGTCCCEE
T ss_pred EE----EecCCCCC-ccceeccC--------------------------------CEE--ECCEEEEEecCCccCCCCEE
Confidence 44 22111000 00000000 001 12334432221 16899
Q ss_pred EEEecCCCceeeeecccccC------CCCC----cC---------------CCCCcee-eeEEEecCCCCCCceEEEEee
Q 021291 175 EIWDLNTAERCTRLHQNSCG------GSPN----FS---------------SKGRGMC-MAVQAYLPSKSQGFVNVLAGY 228 (314)
Q Consensus 175 ~vwd~~~~~~~~~~~~~~~~------~~~~----h~---------------~~~~~~~-~~~~~~~p~~~~g~~~l~~g~ 228 (314)
..+|.++++.+-++...... +... .. ....+.+ ..+. +.|. .+ .++.+.
T Consensus 179 ~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a-~d~~--~g--~vy~~~ 253 (571)
T 2ad6_A 179 NAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA-YDPK--LN--LFYYGS 253 (571)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE-EETT--TT--EEEEEC
T ss_pred EEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE-EcCC--CC--eEEEEC
Confidence 99999999987766531100 0000 00 0000001 1233 6654 13 444444
Q ss_pred cC----------------CcEEEEEccCCCCceEeeec--C--------CcceEEEEEeCCCC---eEEEecCCCcEEEE
Q 021291 229 ED----------------GSILVWDIRNPGIPLTAMKV--H--------LEPVLCLSIDESCN---GGISGGADQKIVLY 279 (314)
Q Consensus 229 ~d----------------g~i~vwd~~~~~~~~~~~~~--h--------~~~v~~~~~~~~~~---~l~s~s~dg~i~iw 279 (314)
.+ +.|..+|.++ ++.+..++. | ..++. +....+|+ .++.++.+|.++++
T Consensus 254 g~~~~~~~~~~~gd~~y~~~v~Ald~~t-G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~l 331 (571)
T 2ad6_A 254 GNPAPWNETMRPGDNKWTMTIWGRDLDT-GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTL 331 (571)
T ss_dssp CCCSCSCGGGSCSCCTTTTEEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEE
T ss_pred CCCccccCCccCCCceeEEEEEEEecCC-CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEE
Confidence 22 3599999998 777766652 2 12222 22234674 57788899999999
Q ss_pred ecCCCeeeEe
Q 021291 280 NLDHSTYVLF 289 (314)
Q Consensus 280 ~~~~~~~~~~ 289 (314)
|.++++.++.
T Consensus 332 D~~tG~~~w~ 341 (571)
T 2ad6_A 332 NRENGNLIVA 341 (571)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCCEEee
Confidence 9999998875
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=0.0044 Score=51.96 Aligned_cols=157 Identities=11% Similarity=0.067 Sum_probs=89.5
Q ss_pred ceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-C----eEEEEeC
Q 021291 20 SVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-G----TVKCWDI 93 (314)
Q Consensus 20 ~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g----~v~iwd~ 93 (314)
....++++| ++..|+.+...+.|+.+|.+.++...... .. .....|+|++ +++.|+.+... + .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~--~~P~~ia~d~--~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GL--SKVRTICWTH--EADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CC--SCEEEEEECT--TSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CC--CCcceEEEeC--CCCEEEEEeCCCCcccceEEEEeC
Confidence 457899997 34455555544889999988765544333 22 4478999999 88866665542 1 2333332
Q ss_pred CCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCe
Q 021291 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSE 173 (314)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 173 (314)
.+.... ...+. .+.....++++|++..+++ +-..++.
T Consensus 213 -~g~~~~--~~~l~---------------------------------------~~~~p~giavdp~~g~lyv-~d~~~~~ 249 (430)
T 3tc9_A 213 -ESGFKV--ITELT---------------------------------------KGQNCNGAETHPINGELYF-NSWNAGQ 249 (430)
T ss_dssp -GGTSCS--EEEEE---------------------------------------ECSSCCCEEECTTTCCEEE-EETTTTE
T ss_pred -CCceee--eeeec---------------------------------------cCCCceEEEEeCCCCEEEE-EECCCCE
Confidence 222211 00000 0001111678885445555 4444688
Q ss_pred EEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEcc
Q 021291 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (314)
Q Consensus 174 i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (314)
|..+|...+........ + .......++ |+|+ |+.++++-..++.|..++.+
T Consensus 250 V~~~~~~~~~~~~~~~~-------~----~~~~P~gia-~~pd---G~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 250 VFRYDFTTQETTPLFTI-------Q----DSGWEFHIQ-FHPS---GNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEETTTTEEEEEEEC-------S----SSSCCEEEE-ECTT---SSEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCcEEEEEEc-------C----CCCcceeEE-EcCC---CCEEEEEECCCCEEEEEeCC
Confidence 99999986654222221 0 112345666 9998 55355566677889998876
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.99 E-value=0.00082 Score=59.79 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=49.0
Q ss_pred EEEEcc-CCCEEEEecCCC-----------eEEEEeCCCCeEE--EEEeccCCcccEEEEEEcccCCCCeEEEeec-CCe
Q 021291 23 DVCFHQ-TKPILFAGTTGG-----------ELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGT 87 (314)
Q Consensus 23 ~~~~~~-~~~~l~s~~~dg-----------~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~ 87 (314)
++++.+ ++++++.|+.+. .+.+||..+++.. ..+..... ....++++.. ++..++.|+. +..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~-~~~~~~~~~~--~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD-MFCPGISMDG--NGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-CSSCEEEECT--TSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC-CccccccCCC--CCCEEEeCCCCCCc
Confidence 566777 888888887543 5889999877532 22222111 1234567777 8888888884 568
Q ss_pred EEEEeCCCCCC
Q 021291 88 VKCWDIENGGL 98 (314)
Q Consensus 88 v~iwd~~~~~~ 98 (314)
+.+||..+.+.
T Consensus 267 v~~yd~~t~~W 277 (656)
T 1k3i_A 267 TSLYDSSSDSW 277 (656)
T ss_dssp EEEEEGGGTEE
T ss_pred eEEecCcCCce
Confidence 99999987654
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.99 E-value=0.0046 Score=51.06 Aligned_cols=197 Identities=14% Similarity=0.009 Sum_probs=111.7
Q ss_pred eeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCC
Q 021291 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLS 99 (314)
Q Consensus 21 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~ 99 (314)
-.|.+..+++ +|+.+. ...|+..++........+... ..+..++|.+ ..+.|+ +-...+.|..+++......
T Consensus 79 ~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~~---~~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~ 151 (386)
T 3v65_B 79 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNL---ENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVE 151 (386)
T ss_dssp SCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECSC---SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEE
T ss_pred CeECCccccc-eeEeec-CccceeeccCCCcEEEEecCC---CccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcE
Confidence 3444444433 444333 346888888766554444333 3478999997 545555 4445778988988765311
Q ss_pred CCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEec
Q 021291 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDL 179 (314)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~ 179 (314)
.+.... +.....+++.+.+..+++ +-...+.|.+.++
T Consensus 152 -----~~~~~~-------------------------------------~~~p~glavd~~~g~lY~-~d~~~~~I~~~~~ 188 (386)
T 3v65_B 152 -----EVVSTG-------------------------------------LESPGGLAVDWVHDKLYW-TDSGTSRIEVANL 188 (386)
T ss_dssp -----EEECSS-------------------------------------CSCCCCEEEETTTTEEEE-EETTTTEEEECBT
T ss_pred -----EEEeCC-------------------------------------CCCccEEEEEeCCCeEEE-EcCCCCeEEEEeC
Confidence 100000 000011567776666665 3444678999988
Q ss_pred CCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC-CcEEEEEccCCCCceEee-ecCCcceEE
Q 021291 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAM-KVHLEPVLC 257 (314)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~-~~h~~~v~~ 257 (314)
........+.. .......++ +.|.+ +. ++++-..+ +.|..++++. .....+ ...-...+.
T Consensus 189 dg~~~~~l~~~------------~l~~P~gia-vdp~~--g~-ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 189 DGAHRKVLLWQ------------SLEKPRAIA-LHPME--GT-IYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNG 250 (386)
T ss_dssp TSCSCEEEECS------------SCSCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEE
T ss_pred CCCceEEeecC------------CCCCCcEEE-EEcCC--Ce-EEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCeee
Confidence 65433222221 112456666 88862 33 55555445 7888888874 333333 233345789
Q ss_pred EEEeCCCC-eEEEecCCCcEEEEecCCCe
Q 021291 258 LSIDESCN-GGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 258 ~~~~~~~~-~l~s~s~dg~i~iw~~~~~~ 285 (314)
|++++++. +.++-+..+.|..++++...
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 99997554 44555667889999987543
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.90 E-value=0.00091 Score=60.47 Aligned_cols=159 Identities=8% Similarity=0.004 Sum_probs=89.9
Q ss_pred cEEEEEEc-ccCCCCeEEEeec-CC----eEEEEeCCCC-CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCccee
Q 021291 64 GIVSVATG-PSIGLNKVISQGR-DG----TVKCWDIENG-GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCY 136 (314)
Q Consensus 64 ~v~~~~~~-~~~~~~~l~s~~~-dg----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (314)
.+...+|+ | ||++|+-+.. +| +|+++|+.++ +.+.. .+ ... . .
T Consensus 175 ~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~~-----~~~-~--~----------------- 224 (751)
T 2xe4_A 175 DVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---KV-----SGT-N--G----------------- 224 (751)
T ss_dssp EEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---CE-----EEE-C--S-----------------
T ss_pred EEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---cc-----cCc-e--e-----------------
Confidence 47889999 9 9998874432 32 5999999988 53211 00 000 0 0
Q ss_pred eccCCceeeecCCCCCCceeccCCCceEEEeecCc---CeEEEEecCCCcee--eeecccccCCCCCcCCCCCceeeeEE
Q 021291 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL---SEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~vwd~~~~~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~ 211 (314)
.++|+|||+.++.+.-... ..|+++++.++... ..+.. . .......+.
T Consensus 225 ----------------~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-------~----~~~~~~~~~ 277 (751)
T 2xe4_A 225 ----------------EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-------H----NPLFSAFMY 277 (751)
T ss_dssp ----------------CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-------C----CTTCEEEEE
T ss_pred ----------------eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec-------C----CCceEEEEE
Confidence 0569999988776543211 36888888776422 22221 0 122345666
Q ss_pred EecCCCCCCceEEEEee--cCCcEEEEEccCCC-Cc--eEeeecCCcceEEEEEeCCCCeEEEecCC----CcEEEEecC
Q 021291 212 AYLPSKSQGFVNVLAGY--EDGSILVWDIRNPG-IP--LTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLD 282 (314)
Q Consensus 212 ~~~p~~~~g~~~l~~g~--~dg~i~vwd~~~~~-~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d----g~i~iw~~~ 282 (314)
|+|| |+.++++.. ....|+++|+.++. .. ............++.|+..+.+++....+ ..|..+++.
T Consensus 278 -~SpD---g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 278 -KAAD---TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp -ECTT---SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred -ECCC---CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 9998 653333332 23468888988632 23 22233344566677765555555554443 356667766
Q ss_pred C
Q 021291 283 H 283 (314)
Q Consensus 283 ~ 283 (314)
+
T Consensus 354 ~ 354 (751)
T 2xe4_A 354 Q 354 (751)
T ss_dssp S
T ss_pred C
Confidence 4
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.87 E-value=0.0064 Score=48.71 Aligned_cols=205 Identities=8% Similarity=-0.091 Sum_probs=117.6
Q ss_pred ceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEE-EEEeccCCcccEEEEEEcccCCCCe-EEEeecCCeEEEEeCCCC
Q 021291 20 SVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTV-SSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENG 96 (314)
Q Consensus 20 ~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~ 96 (314)
.+.+++|++ ++.++.+-...+.|..++...+... ..+...- .....+++.+ .+.. +++-...+.|.++++...
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~--~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDW--LGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEc--CCCeEEEEECCCCEEEEEECCCC
Confidence 466889998 4555666667889999998765321 1122111 2256788876 4444 445555778999998754
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v 176 (314)
... .+.......... +++.|.+..++.+-....+.|..
T Consensus 112 ~~~---~l~~~~~~~P~g---------------------------------------iavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 112 LRK---VLFWQELDQPRA---------------------------------------IALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp SCE---EEECSSCSSEEE---------------------------------------EEEEGGGTEEEEEECSSSCEEEE
T ss_pred cEE---EEEeCCCCCccE---------------------------------------EEEeCCCCEEEEEecCCCCEEEE
Confidence 211 110000000000 55677666666543223577888
Q ss_pred EecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceE
Q 021291 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL 256 (314)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 256 (314)
.++.... ...+.. . .-.....++ ++|++ ++ +.++-...+.|..+|++. ........+......
T Consensus 150 ~~~dG~~-~~~~~~-------~----~l~~Pngla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~ 212 (318)
T 3sov_A 150 AGMDGSS-RFIIIN-------S----EIYWPNGLT-LDYEE--QK-LYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPF 212 (318)
T ss_dssp EETTSCS-CEEEEC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEECSCCSCEE
T ss_pred EEcCCCC-eEEEEE-------C----CCCCccEEE-EeccC--CE-EEEEECCCCEEEEEcCCC-CceEEEecCCCCCce
Confidence 8876332 222220 0 112456676 99862 33 566666778999999873 222222232344567
Q ss_pred EEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 257 CLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
.++++.+ ..+++-...+.|..++..+++...
T Consensus 213 glav~~~-~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 213 ALTLFED-ILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEEEETT-EEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEeCC-EEEEEecCCCeEEEEECCCCCceE
Confidence 8888755 455666677899999987776543
No 270
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.0095 Score=50.53 Aligned_cols=206 Identities=9% Similarity=-0.010 Sum_probs=113.6
Q ss_pred ceeEEEEcc-C-CCEEEEecCCCeEEEEeCCCCeEEEEEeccC-CcccEEEEEE-------cccCCCCeEEEeecCC---
Q 021291 20 SVTDVCFHQ-T-KPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVAT-------GPSIGLNKVISQGRDG--- 86 (314)
Q Consensus 20 ~v~~~~~~~-~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~~~l~s~~~dg--- 86 (314)
....|+|+| + ++++++-...+.|++.|++++.....+.... .......|+| ++ +++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC--CCCEEEEEeCCCCCc
Confidence 356899998 3 4444444445679999988766654443321 1234789999 99 888677666543
Q ss_pred ----eEEEEeCCC-CCCCCCCe-eeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCC
Q 021291 87 ----TVKCWDIEN-GGLSSNPS-LTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (314)
Q Consensus 87 ----~v~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (314)
.|.+.+... +.....+. ..+. . +..-..++++|++
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~-------~--------------------------------~~~p~giavdp~~ 258 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA-------A--------------------------------YKQCNGATIHPIN 258 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE-------E--------------------------------ESCCCCEEECTTT
T ss_pred ccCceEEEEecCCCCceeecccceeec-------c--------------------------------CCCceEEEEcCCC
Confidence 255555333 22110000 0000 0 0000116688877
Q ss_pred CceEEEeecCcCeEEEEecC-------CCce-----------eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCce
Q 021291 161 PKYMAVAGEQLSEVEIWDLN-------TAER-----------CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 161 ~~~~~~~g~~d~~i~vwd~~-------~~~~-----------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~ 222 (314)
..+++ +-..++.|..+|+. ++.. ...+.. . ........++ |+|+ |..
T Consensus 259 g~LYv-td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~--------~--~~~~~p~~ia-~~p~---G~~ 323 (496)
T 3kya_A 259 GELYF-NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT--------I--ADPSWEFQIF-IHPT---GKY 323 (496)
T ss_dssp CCEEE-EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE--------C--SSSSCCEEEE-ECTT---SSE
T ss_pred CeEEE-EECCCCEEEEEecccccccccCceeecccccccccccceeEe--------c--CCCCCceEEE-EcCC---CCE
Confidence 77766 45557889999987 4543 111110 0 0123456676 9998 553
Q ss_pred EEEEeecCCcEEEEEccCCCCce---EeeecC------C---------cceE-EEEEe-------CCCCeEEEecCCCcE
Q 021291 223 NVLAGYEDGSILVWDIRNPGIPL---TAMKVH------L---------EPVL-CLSID-------ESCNGGISGGADQKI 276 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~---~~~~~h------~---------~~v~-~~~~~-------~~~~~l~s~s~dg~i 276 (314)
++++-...+.|+.++.......+ ..+-+. . .... .+..+ .++.++++=...+.|
T Consensus 324 lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 324 AYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEE
T ss_pred EEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEE
Confidence 45555677889997765311111 222221 0 1234 45555 567777777778889
Q ss_pred EEEec
Q 021291 277 VLYNL 281 (314)
Q Consensus 277 ~iw~~ 281 (314)
+.++.
T Consensus 404 r~i~~ 408 (496)
T 3kya_A 404 RKVTP 408 (496)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 99983
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.86 E-value=0.016 Score=52.81 Aligned_cols=240 Identities=9% Similarity=0.038 Sum_probs=123.3
Q ss_pred eeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEe-ccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCC
Q 021291 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (314)
Q Consensus 21 v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 99 (314)
|.++...+++++.+ ++.++-|..|+..+++...... ... ..|.++...+ ++. |..++.++-|.+||..+++..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~--~~i~~i~~d~--~g~-lwigt~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGT--KQIQAILQQS--PTR-IWVATEGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----C--CCEEEEEEEE--TTE-EEEEEBSSCEEEEETTTTEEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCC--CeeEEEEEcC--CCC-EEEEECCCCeEEEeCCCCeEE
Confidence 88888888886555 5655458899987765443211 122 4488888877 655 445554445889998775431
Q ss_pred CCCeeeeec------ceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCC-------CCC---ceeccCCCce
Q 021291 100 SNPSLTIKT------NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-------DSK---DDVPAEGPKY 163 (314)
Q Consensus 100 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~ 163 (314)
. +.... .......+........-..... ....++............. ... +...++|. +
T Consensus 249 ~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-l 323 (795)
T 4a2l_A 249 N---YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-M 323 (795)
T ss_dssp E---ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-E
T ss_pred E---eecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-E
Confidence 1 10000 0011111111111111111111 2233333333222111110 111 44455554 3
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
.+ |+.++-|..|+..+... ..+.... ....-....+.++. ..++ |. |..|+.++-|..||..+ +.
T Consensus 324 Wi--gt~~~Gl~~~~~~~~~~-~~~~~~~-----~~~~l~~~~V~~i~-~d~~---g~--lWiGt~~~Gl~~~~~~~-~~ 388 (795)
T 4a2l_A 324 WL--GTYFGGLNYYHPIRNRF-KNIRNIP-----YKNSLSDNVVSCIV-EDKD---KN--LWIGTNDGGLNLYNPIT-QR 388 (795)
T ss_dssp EE--EESSSCEEEECGGGGSS-EEECCCT-----TSSSCSCSSEEEEE-ECTT---SC--EEEEESSSCEEEECTTT-CC
T ss_pred EE--EECCCCeEEeCCCcccc-eEEcCCC-----CCCCCCCCeeEEEE-ECCC---CC--EEEEECCCCeEEEcCCC-Cc
Confidence 32 44456799998765542 2222100 00011123466665 5554 54 66788887899999875 33
Q ss_pred ceEeee--------cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 244 PLTAMK--------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 244 ~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
...... .....|.++..++++..|..|+.++-|.+||..+++.
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 222111 1235799999999987456667767799999887654
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.82 E-value=0.00078 Score=60.23 Aligned_cols=227 Identities=10% Similarity=-0.063 Sum_probs=113.3
Q ss_pred CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee-cCCeEEEEeCCC----CCCCCCCeeeeecceeeE
Q 021291 39 GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGTVKCWDIEN----GGLSSNPSLTIKTNSYHF 113 (314)
Q Consensus 39 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~~~~~~~~~~ 113 (314)
.+.|++.++.+.+....+... ..+..|+|.+ ....|+.+. ..+.|+.+++.. ..... ++.........
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~---~~p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~--~i~~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDG 457 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC---TTCCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCC--BCCSCC--CCC
T ss_pred ccceEEEeCCCCcceeeeccC---cceEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEE--EEeCCCCCcce
Confidence 357888888776554433332 3367899988 656666554 467899999875 11111 11100001111
Q ss_pred EEeeeeeccccccccCCCCcceeeccCCceeeec---CCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecc
Q 021291 114 CKLSLVKEPYANAKQANEPKDCYEREVGETVDTD---SLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 190 (314)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~ 190 (314)
..+..........-.....+.++++......... +.....+++.|.+..++++-....+.|..+++.... ...+..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~ 536 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT 536 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESC
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEe
Confidence 1111111111111111122223333222211111 111122889987777765332223678888775332 222210
Q ss_pred cccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee--cCCcceEEEEEeCCCCeEE
Q 021291 191 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK--VHLEPVLCLSIDESCNGGI 268 (314)
Q Consensus 191 ~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 268 (314)
. .-.....++ ++|++ ++ ++++-...+.|.++|+.. ......+. ........|+++.+ .+++
T Consensus 537 -------~----~l~~PnGla-vd~~~--~~-LY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~-~lyw 599 (699)
T 1n7d_A 537 -------E----NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-KVFW 599 (699)
T ss_dssp -------S----SCSSCCCEE-ECTTT--CC-EEEEETTTTEEEEECSSS-SCCEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred -------C----CCCCccEEE-EeccC--CE-EEEEecCCCeEEEEccCC-CceEEEEecCCcCCCceEeEEECC-EEEE
Confidence 0 012344565 88872 33 666666778899999874 22222222 11223456677766 4556
Q ss_pred EecCCCcEEEEecCCCeeeEee
Q 021291 269 SGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 269 s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
+....+.|..++..+++.+..+
T Consensus 600 td~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 600 TDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp ECSTTTCEEEEETTTEEEEECC
T ss_pred EeCCCCeEEEEEccCCCceEEe
Confidence 6667789999998887766543
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.82 E-value=0.011 Score=49.65 Aligned_cols=199 Identities=10% Similarity=0.014 Sum_probs=111.2
Q ss_pred ceeEEEEccC--CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC----e-EEEEe
Q 021291 20 SVTDVCFHQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG----T-VKCWD 92 (314)
Q Consensus 20 ~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~-v~iwd 92 (314)
....++|+|+ +..|+.+...+.|+.+|..+++...... .. .....+++++ +++ |+.+...+ . +...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~--~~P~giavd~--dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NI--GQCADVNFTL--NGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CC--SCEEEEEECT--TCC-EEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CC--CCccEEEECC--CCC-EEEEcCCCCcccceEEEEE
Confidence 4568999984 3345444444889999987776654433 22 3478999999 888 44444322 1 22222
Q ss_pred CCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcC
Q 021291 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (314)
.. +.... . .. + ..+.....++++|++..+++ +-..++
T Consensus 214 ~~-~~~~~--~-------~~---~-----------------------------~~~~~P~giavd~~~G~lyv-~d~~~~ 250 (433)
T 4hw6_A 214 RA-SGFTE--R-------LS---L-----------------------------CNARGAKTCAVHPQNGKIYY-TRYHHA 250 (433)
T ss_dssp GG-GTTCC--E-------EE---E-----------------------------EECSSBCCCEECTTTCCEEE-CBTTCS
T ss_pred CC-CCeec--c-------cc---c-----------------------------cccCCCCEEEEeCCCCeEEE-EECCCC
Confidence 11 11000 0 00 0 00111111678884445554 444568
Q ss_pred eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCC-CCc--eEeee
Q 021291 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP--LTAMK 249 (314)
Q Consensus 173 ~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~--~~~~~ 249 (314)
.|+.+|..++.....+... +. ......++ |+|+ |+.++++-...+.|+.++.... +.. ...+.
T Consensus 251 ~V~~~d~~~g~~~~~~~~~------~~----~~~~~~ia-~dpd---G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~a 316 (433)
T 4hw6_A 251 MISSYDPATGTLTEEEVMM------DT----KGSNFHIV-WHPT---GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVC 316 (433)
T ss_dssp EEEEECTTTCCEEEEEEEC------SC----CSSCEEEE-ECTT---SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEE
T ss_pred EEEEEECCCCeEEEEEecc------CC----CCCcccEE-EeCC---CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEE
Confidence 8999999877653333210 11 11223466 9998 5435556666788999887521 211 11222
Q ss_pred cC---------------CcceEEEEE---------eCCCCeEEEecCCCcEEEEec
Q 021291 250 VH---------------LEPVLCLSI---------DESCNGGISGGADQKIVLYNL 281 (314)
Q Consensus 250 ~h---------------~~~v~~~~~---------~~~~~~l~s~s~dg~i~iw~~ 281 (314)
+. -.....+++ +.++.++++-...+.|+.++.
T Consensus 317 g~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 317 GQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp ECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred ecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 21 123567999 788887777777888999885
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.0097 Score=49.91 Aligned_cols=217 Identities=11% Similarity=0.040 Sum_probs=109.2
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecC-CC----eEEEEeCCCCeEE--EEEeccCCcccEEEEEEcccCCCCeEE-Ee
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTT-GG----ELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVI-SQ 82 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~-dg----~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~ 82 (314)
+..+.........++|+++|++|+.+.. ++ .+.+.+.. +... ..+... .....+++.| +...|+ +-
T Consensus 171 v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~~---~~p~giavdp--~~g~lyv~d 244 (430)
T 3tc9_A 171 VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTKG---QNCNGAETHP--INGELYFNS 244 (430)
T ss_dssp EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEEC---SSCCCEEECT--TTCCEEEEE
T ss_pred EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-CceeeeeeeccC---CCceEEEEeC--CCCEEEEEE
Confidence 4444444556788999999985555443 22 34444432 2211 223222 2256788888 444444 44
Q ss_pred ecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCc
Q 021291 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (314)
Q Consensus 83 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
..++.|..++..++.... ........... .++|+|+|+.
T Consensus 245 ~~~~~V~~~~~~~~~~~~--~~~~~~~~~P~---------------------------------------gia~~pdG~~ 283 (430)
T 3tc9_A 245 WNAGQVFRYDFTTQETTP--LFTIQDSGWEF---------------------------------------HIQFHPSGNY 283 (430)
T ss_dssp TTTTEEEEEETTTTEEEE--EEECSSSSCCE---------------------------------------EEEECTTSSE
T ss_pred CCCCEEEEEECCCCcEEE--EEEcCCCCcce---------------------------------------eEEEcCCCCE
Confidence 457889999987653210 00000000000 0679999986
Q ss_pred eEEEeecCcCeEEEEecCC--Cce--eeeecccccCCCCCcCCC-----CCceee-eEEEecCC-----CCCCceEEEEe
Q 021291 163 YMAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSK-----GRGMCM-AVQAYLPS-----KSQGFVNVLAG 227 (314)
Q Consensus 163 ~~~~~g~~d~~i~vwd~~~--~~~--~~~~~~~~~~~~~~h~~~-----~~~~~~-~~~~~~p~-----~~~g~~~l~~g 227 (314)
+++ +-...+.|..++... ++. +..+.... ...+..+. .-.... .+. ..++ +.+|. ++++-
T Consensus 284 lyv-~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~-lyvaD 358 (430)
T 3tc9_A 284 AYI-VVVNQHYILRSDYDWKTKRLTTPYIVCGQQ--GAKDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYD-FYFCD 358 (430)
T ss_dssp EEE-EETTTTEEEEEEEETTTTEECCCEEEEECT--TCBCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEE-EEEEE
T ss_pred EEE-EECCCCEEEEEeCCcccccccceEEEeccC--CCCCCCCCCCcceEeCCCcceEE-EccccccccCCCCe-EEEEE
Confidence 665 444568899987653 221 12222100 00011000 000111 222 2211 12244 55555
Q ss_pred ecCCcEEEEEccCCCCceEeeecC------------------CcceEEEEEeC-CCCeEEEecCCCcEEEEecC
Q 021291 228 YEDGSILVWDIRNPGIPLTAMKVH------------------LEPVLCLSIDE-SCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 228 ~~dg~i~vwd~~~~~~~~~~~~~h------------------~~~v~~~~~~~-~~~~l~s~s~dg~i~iw~~~ 282 (314)
..++.|+.++.. +. +..+.+. -.....|++++ ++.++++-...+.|+.++++
T Consensus 359 ~~n~~I~~i~~~--G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 359 RENHCIRILTPQ--GR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GGGTEEEEECTT--SE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEECCC--Cc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 567788888733 43 2222221 11468899998 56666666667788887765
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.79 E-value=0.011 Score=49.71 Aligned_cols=219 Identities=12% Similarity=0.075 Sum_probs=110.1
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCC---Ce-EEEEeCCCCeE-EEEEeccCCcccEEEEEEcccCCCCeEE-Eeec
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTG---GE-LRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGR 84 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~d---g~-v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~ 84 (314)
+..+.+.......++|+++|+++++.... .. +...+...+.. ...+... .....+++.| +...|+ +-..
T Consensus 174 v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~---~~P~giavd~--~~G~lyv~d~~ 248 (433)
T 4hw6_A 174 VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNA---RGAKTCAVHP--QNGKIYYTRYH 248 (433)
T ss_dssp EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEEC---SSBCCCEECT--TTCCEEECBTT
T ss_pred EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccccc---CCCCEEEEeC--CCCeEEEEECC
Confidence 34444444567899999999855554321 11 33333222111 1112111 2246778887 444455 4445
Q ss_pred CCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceE
Q 021291 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (314)
Q Consensus 85 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
++.|+.+|..++..... ........... .++|+|+++.++
T Consensus 249 ~~~V~~~d~~~g~~~~~-~~~~~~~~~~~---------------------------------------~ia~dpdG~~LY 288 (433)
T 4hw6_A 249 HAMISSYDPATGTLTEE-EVMMDTKGSNF---------------------------------------HIVWHPTGDWAY 288 (433)
T ss_dssp CSEEEEECTTTCCEEEE-EEECSCCSSCE---------------------------------------EEEECTTSSEEE
T ss_pred CCEEEEEECCCCeEEEE-EeccCCCCCcc---------------------------------------cEEEeCCCCEEE
Confidence 67899999876643110 00000000000 067999998666
Q ss_pred EEeecCcCeEEEEecC--CCce--eeeecccccCCCCCcCC-----CCCceeeeEEEecC------CCCCCceEEEEeec
Q 021291 165 AVAGEQLSEVEIWDLN--TAER--CTRLHQNSCGGSPNFSS-----KGRGMCMAVQAYLP------SKSQGFVNVLAGYE 229 (314)
Q Consensus 165 ~~~g~~d~~i~vwd~~--~~~~--~~~~~~~~~~~~~~h~~-----~~~~~~~~~~~~~p------~~~~g~~~l~~g~~ 229 (314)
+ +-...+.|+.++.. ++.. ...+.... ...+... ..-.....++ +.+ +..+|. ++++-..
T Consensus 289 v-ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~~g~~dg~~~~a~~~~P~gia-v~~n~~y~~dd~~g~-lyvaD~~ 363 (433)
T 4hw6_A 289 I-IYNGKHCIYRVDYNRETGKLAVPYIVCGQH--SSPGWVDGMGTGARLWGPNQGI-FVKNEAYAGEEDEYD-FYFCDRD 363 (433)
T ss_dssp E-EETTTTEEEEEEBCTTTCCBCCCEEEEECT--TCCCCBCEEGGGSBCSSEEEEE-EEECGGGTTSSCCEE-EEEEETT
T ss_pred E-EeCCCCEEEEEeCCCCCcccCcEEEEEecC--CCCccCCCcccceEEcCCccEE-EEccccccccCCCCc-EEEEECC
Confidence 5 44456889998765 2321 11222100 0001100 0011234454 611 112254 5666666
Q ss_pred CCcEEEEEccCCCCceEeeecC------------------CcceEEEEEe-CCCCeEEEecCCCcEEEEecC
Q 021291 230 DGSILVWDIRNPGIPLTAMKVH------------------LEPVLCLSID-ESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h------------------~~~v~~~~~~-~~~~~l~s~s~dg~i~iw~~~ 282 (314)
++.|+.++.. +. +..+.+. -.....|+++ +++.++++=...+.|+.++++
T Consensus 364 n~~I~~~~~~--G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 364 SHTVRVLTPE--GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTEEEEECTT--SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEECCC--CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 7888888853 43 3333221 1236788998 777777776677788887765
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.77 E-value=0.012 Score=48.83 Aligned_cols=209 Identities=11% Similarity=-0.060 Sum_probs=117.6
Q ss_pred CCCceeEEEEccC-CCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEE
Q 021291 17 HRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKC 90 (314)
Q Consensus 17 h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~i 90 (314)
....+..++|++. +.++.+-...+.|+.+++... .....+.... .....|++.+ .+..|+ +-...+.|.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavD~--~~~~lY~~d~~~~~I~~ 185 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSV 185 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC--SCEEEEEEET--TTTEEEEEETTTTEEEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEEEe--cCCceEEEECCCCeEEE
Confidence 3456789999985 445555566788999988652 2222222222 3367888886 444444 5455778988
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (314)
.+++...... +.. ...... . .+++.|.+..++.+-...
T Consensus 186 ~~~~g~~~~~--l~~-~~~~~P------~---------------------------------~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 186 ADTKGVKRKT--LFR-ENGSKP------R---------------------------------AIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp ECTTTCSEEE--EEE-CSSCCE------E---------------------------------EEEEETTTTEEEEEECSS
T ss_pred EeCCCCceEE--EEe-CCCCCc------c---------------------------------eEEEecccCeEEEEeCCC
Confidence 8887543211 100 000000 0 056777766666543233
Q ss_pred cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec
Q 021291 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (314)
.+.|...++........+.. .-.....++ ++|++ ++ +.++-...+.|..+|++. .........
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~------------~l~~P~gla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~ 286 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTE------------NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILED 286 (400)
T ss_dssp SCCEEEEETTSCSCEEEECS------------SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CCCEEEEEC
T ss_pred CCEEEEEeCCCCccEEEEEC------------CCCceEEEE-EEeCC--CE-EEEEECCCCEEEEEeCCC-CccEEEEeC
Confidence 46788888764333222220 112456676 88862 33 555656678899999874 322222222
Q ss_pred --CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 251 --HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 251 --h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.-.....|++..+ .++++-...+.|..++..+++.+..
T Consensus 287 ~~~l~~P~gl~v~~~-~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 287 EKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp SSTTSSEEEEEEETT-EEEEEESSSCSEEEEESSSCCCCEE
T ss_pred CCCCCCCEEEEEeCC-EEEEecCCCCeEEEEEcCCCCceEE
Confidence 2234567777544 4556667778899999777765443
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.74 E-value=0.011 Score=47.38 Aligned_cols=207 Identities=10% Similarity=-0.109 Sum_probs=117.2
Q ss_pred CCceeEEEEccCC-CEEEEecCCCeEEEEeCCC---CeEEEE-EeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEE
Q 021291 18 RASVTDVCFHQTK-PILFAGTTGGELRIWDTVQ---HRTVSS-SWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCW 91 (314)
Q Consensus 18 ~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~---~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw 91 (314)
...+..++|++++ .++++-..++.|..++... +..... +.... .....+++.+ .+..| ++-...+.|.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~--~~~~ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSVA 104 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEee--cCCeEEEEECCCCEEEEE
Confidence 4456789999855 4555666678999999875 122222 22111 2357888876 44444 454567889999
Q ss_pred eCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCc
Q 021291 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (314)
|+....... +... ..... . .+++.|.+..++.+.....
T Consensus 105 ~~~g~~~~~--~~~~-~~~~P------~---------------------------------~iavdp~~g~ly~~d~~~~ 142 (316)
T 1ijq_A 105 DTKGVKRKT--LFRE-NGSKP------R---------------------------------AIVVDPVHGFMYWTDWGTP 142 (316)
T ss_dssp ETTSSSEEE--EEEC-TTCCE------E---------------------------------EEEEETTTTEEEEEECSSS
T ss_pred eCCCCceEE--EEEC-CCCCc------c---------------------------------eEEeCCCCCEEEEEccCCC
Confidence 887532110 0000 00000 0 0567777766665432222
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEee-ec
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-KV 250 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~-~~ 250 (314)
+.|..+++.. .....+.. . .-.....++ ++|+ +..++++-...+.|..+|++. .....+ ..
T Consensus 143 ~~I~~~~~dG-~~~~~~~~-------~----~~~~P~gla-~d~~---~~~lY~~D~~~~~I~~~d~dg--~~~~~~~~~ 204 (316)
T 1ijq_A 143 AKIKKGGLNG-VDIYSLVT-------E----NIQWPNGIT-LDLL---SGRLYWVDSKLHSISSIDVNG--GNRKTILED 204 (316)
T ss_dssp CEEEEEETTS-CCEEEEEC-------S----SCSCEEEEE-EETT---TTEEEEEETTTTEEEEEETTS--CSCEEEEEC
T ss_pred CeEEEEcCCC-CCeEEEEE-------C----CCCCceEEE-Eecc---CCEEEEEECCCCeEEEEecCC--CceEEEeec
Confidence 6788888753 33333321 0 122456676 8887 332556666778999999873 323333 21
Q ss_pred --CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 251 --HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 251 --h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.......|+++. +..+++-...+.|..++..+++.+..
T Consensus 205 ~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 205 EKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp TTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred CCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEE
Confidence 223467888864 55667777788999999877765443
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.65 E-value=0.032 Score=50.48 Aligned_cols=210 Identities=11% Similarity=-0.067 Sum_probs=117.7
Q ss_pred CCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEE
Q 021291 17 HRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKC 90 (314)
Q Consensus 17 h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~i 90 (314)
....+..|+|++ ++.++++-...+.|+.+++... .....+.... .....|++.+ .++.|+ +-...+.|.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--~~P~GLAvD~--~~~~LY~tD~~~~~I~v 497 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSV 497 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--CCcceeeeee--cCCcEEEEecCCCeEEE
Confidence 345677899998 4555566666788999988752 2222232222 2366888887 554444 5556788999
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecC
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (314)
.++....... +.. ...... .. +++.|.+..++.+-.+.
T Consensus 498 ~~ldG~~~~~--l~~-~~l~~P------~g---------------------------------IaVDp~~g~LYwtD~g~ 535 (791)
T 3m0c_C 498 ADTKGVKRKT--LFR-ENGSKP------RA---------------------------------IVVDPVHGFMYWTDWGT 535 (791)
T ss_dssp EETTSSSEEE--EEE-CTTCCE------EE---------------------------------EEEETTTTEEEEEECSS
T ss_pred EeCCCCeEEE--EEe-CCCCCc------ce---------------------------------EEEecCCCCEEEecCCC
Confidence 9987543110 100 000000 00 56777766666643332
Q ss_pred cCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeec
Q 021291 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (314)
Q Consensus 171 d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (314)
.+.|...++........+. . .-.....|+ ++|.. ++ ++++-...+.|..+++.. ......+..
T Consensus 536 ~~~I~~~~~dG~~~~~lv~--------~----~l~~P~GLa-vD~~~--~~-LYwaD~~~~~I~~~d~dG-~~~~~v~~~ 598 (791)
T 3m0c_C 536 PAKIKKGGLNGVDIYSLVT--------E----NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILED 598 (791)
T ss_dssp SCEEEEEETTSCCEEEEEC--------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEEEC
T ss_pred CCeEEEEecCCCceEEEEe--------C----CCCCceEEE-EecCC--Ce-EEEEeCCCCcEEEEecCC-CceEEEecC
Confidence 3678888886443322222 1 112456666 88762 33 555556667899999874 333333332
Q ss_pred C--CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 251 H--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 251 h--~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
. -....+|++..+ .++++-...+.|...+..+++.+..+
T Consensus 599 ~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 599 EKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 1 224457777554 45566667788888887777655443
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.64 E-value=0.017 Score=46.95 Aligned_cols=215 Identities=8% Similarity=-0.032 Sum_probs=109.3
Q ss_pred CceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEeCCCC
Q 021291 19 ASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~ 96 (314)
..+..++|++. +.++++-...+.|..++.........+.... .....+++.+ .+..| ++-...+.|.+.++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~--~~p~glavd~--~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL--ESPGGLAVDW--VHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCC--CCccEEEEec--CCCeEEEEcCCCCeEEEEcCCCC
Confidence 34678999974 4455555677889999987654333332222 2256888886 44444 45555788999998754
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecC-C-CC--CC-ceeccCCCceEEEeecCc
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS-L-CD--SK-DDVPAEGPKYMAVAGEQL 171 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~-~~~~~~~~~~~~~~g~~d 171 (314)
.... +............+.+... .......+....++.+.........+ . .- .. ++++|++..++++ -...
T Consensus 149 ~~~~--l~~~~l~~P~~iavdp~~g-~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a-D~~~ 224 (349)
T 3v64_C 149 HRKV--LLWQSLEKPRAIALHPMEG-TIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV-DAKH 224 (349)
T ss_dssp SCEE--EECTTCSCEEEEEEETTTT-EEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEE-ETTT
T ss_pred ceEE--EEeCCCCCcceEEEecCcC-eEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEE-ECCC
Confidence 3211 1111111112222221111 11111111112333332211111111 1 11 11 8999888777764 4446
Q ss_pred CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecC
Q 021291 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 251 (314)
Q Consensus 172 ~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h 251 (314)
+.|..+|+........+.. . ......++ +. . +. ++++-...+.|..+|..+ ++.+..+...
T Consensus 225 ~~I~~~~~dG~~~~~~~~~--------~----~~~P~gia-v~-~---~~-ly~td~~~~~V~~~~~~~-G~~~~~i~~~ 285 (349)
T 3v64_C 225 HVIERANLDGSHRKAVISQ--------G----LPHPFAIT-VF-E---DS-LYWTDWHTKSINSANKFT-GKNQEIIRNK 285 (349)
T ss_dssp TEEEEEETTSCSCEEEECS--------S----CSSEEEEE-EE-T---TE-EEEEETTTTEEEEEETTT-CCSCEEEECS
T ss_pred CEEEEEeCCCCceEEEEeC--------C----CCCceEEE-EE-C---CE-EEEecCCCCeEEEEEccC-CCccEEeccC
Confidence 8899999874332222221 1 12344555 52 1 33 666666778888888655 5555555543
Q ss_pred CcceEEEEE
Q 021291 252 LEPVLCLSI 260 (314)
Q Consensus 252 ~~~v~~~~~ 260 (314)
.....+|++
T Consensus 286 ~~~p~gi~v 294 (349)
T 3v64_C 286 LHFPMDIHT 294 (349)
T ss_dssp CSCCCCEEE
T ss_pred CCCCceEEE
Confidence 344455555
No 280
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.58 E-value=0.054 Score=51.29 Aligned_cols=76 Identities=11% Similarity=0.031 Sum_probs=50.3
Q ss_pred CCceeEEEEccC------CCEEEEecC-CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 18 RASVTDVCFHQT------KPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 18 ~~~v~~~~~~~~------~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
...|.|+++.|. .++++.|.. |++|+|+++.+.+.+........ ....++.+.......+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 467999999863 368999986 99999999988766654433211 1234444432113457888888998866
Q ss_pred EeCC
Q 021291 91 WDIE 94 (314)
Q Consensus 91 wd~~ 94 (314)
+.+.
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6543
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.54 E-value=0.017 Score=44.43 Aligned_cols=188 Identities=12% Similarity=0.077 Sum_probs=100.1
Q ss_pred cEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCc
Q 021291 64 GIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (314)
.+..++|+| +++.|+ +...++.|...|.. ++..+ .+.+........
T Consensus 28 ~lSGla~~~--~~~~L~aV~d~~~~I~~ld~~-g~v~~--~i~l~g~~D~EG---------------------------- 74 (255)
T 3qqz_A 28 NISSLTWSA--QSNTLFSTINKPAAIVEMTTN-GDLIR--TIPLDFVKDLET---------------------------- 74 (255)
T ss_dssp CEEEEEEET--TTTEEEEEEETTEEEEEEETT-CCEEE--EEECSSCSSEEE----------------------------
T ss_pred CcceeEEeC--CCCEEEEEECCCCeEEEEeCC-CCEEE--EEecCCCCChHH----------------------------
Confidence 499999999 666555 56678889999987 54332 111111000000
Q ss_pred eeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCce
Q 021291 143 TVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (314)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~ 222 (314)
+++.+++. +++ +...++.+.++++.....+........ .. + ....+...-.++ |+|. +.
T Consensus 75 -----------Ia~~~~g~-~~v-s~E~~~~l~~~~v~~~~~i~~~~~~~~-~~-~-~~~~N~g~EGLA-~d~~---~~- 133 (255)
T 3qqz_A 75 -----------IEYIGDNQ-FVI-SDERDYAIYVISLTPNSEVKILKKIKI-PL-Q-ESPTNCGFEGLA-YSRQ---DH- 133 (255)
T ss_dssp -----------EEECSTTE-EEE-EETTTTEEEEEEECTTCCEEEEEEEEC-CC-S-SCCCSSCCEEEE-EETT---TT-
T ss_pred -----------eEEeCCCE-EEE-EECCCCcEEEEEcCCCCeeeeeeeecc-cc-c-cccccCCcceEE-EeCC---CC-
Confidence 44555554 333 454568899998765442221111000 00 0 011233356676 9997 33
Q ss_pred EEEEeecCCcEEEEEcc--CCCCceEeee-------cCCcceEEEEEeCCC-CeEEEecCCCcEEEEecCCCee------
Q 021291 223 NVLAGYEDGSILVWDIR--NPGIPLTAMK-------VHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTY------ 286 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~--~~~~~~~~~~-------~h~~~v~~~~~~~~~-~~l~s~s~dg~i~iw~~~~~~~------ 286 (314)
.|+++.+.....+|.++ .....+..+. .+...+.+++++|.. .+++.....+.+.++|.+..-.
T Consensus 134 ~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~ 213 (255)
T 3qqz_A 134 TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLT 213 (255)
T ss_dssp EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECS
T ss_pred EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcC
Confidence 34445444444555543 1112222221 123356889998754 4455555667777777654311
Q ss_pred ---------eEeeeeeeecCCCceecee
Q 021291 287 ---------VLFGIGFVCDQEGNKFGTT 305 (314)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~ 305 (314)
+.+..|++++++|.++..+
T Consensus 214 ~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 214 KGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp TTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred CccCCcccccCCCCeeEECCCCCEEEEc
Confidence 1235788899999877664
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.0036 Score=55.67 Aligned_cols=74 Identities=12% Similarity=0.138 Sum_probs=50.2
Q ss_pred eeEEEEccCCCEEEEecC-CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee-cC-----CeEEEEeC
Q 021291 21 VTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RD-----GTVKCWDI 93 (314)
Q Consensus 21 v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-----g~v~iwd~ 93 (314)
..++++..++++++.|+. +..+.+||..+.+....-..+.. ..-.+++..+ +++.++.|+ .+ ..+.+||.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~--dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMS--DGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECT--TSCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc-ccccceEEec--CCeEEEEeCcccCCcccccceEeCC
Confidence 345677789999999884 55899999987765433222221 1123455666 778888888 34 57999999
Q ss_pred CCCC
Q 021291 94 ENGG 97 (314)
Q Consensus 94 ~~~~ 97 (314)
.+.+
T Consensus 322 ~t~~ 325 (656)
T 1k3i_A 322 SSKT 325 (656)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8764
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.52 E-value=0.049 Score=49.31 Aligned_cols=185 Identities=12% Similarity=0.053 Sum_probs=102.4
Q ss_pred CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeee
Q 021291 40 GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL 118 (314)
Q Consensus 40 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (314)
..|+..++...+....+... ..+..|+|.+ ....|+ +-...+.|+.+++............+...
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~---~~~~gl~~d~--~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~--------- 469 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD--------- 469 (791)
T ss_dssp SSEEEECTTSCCCEEEECSC---SSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSS---------
T ss_pred cceeEeeccCCcceeeecCC---CceEEEeecc--cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC---------
Confidence 45888888766554444333 3478999988 545544 44456788888886532100000000000
Q ss_pred eeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCC
Q 021291 119 VKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPN 198 (314)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 198 (314)
+..-.++++.+.+.++++ +-...+.|.+.++........+..
T Consensus 470 -----------------------------l~~P~GLAvD~~~~~LY~-tD~~~~~I~v~~ldG~~~~~l~~~-------- 511 (791)
T 3m0c_C 470 -----------------------------IQAPDGLAVDWIHSNIYW-TDSVLGTVSVADTKGVKRKTLFRE-------- 511 (791)
T ss_dssp -----------------------------CSCCCEEEEETTTTEEEE-EETTTTEEEEEETTSSSEEEEEEC--------
T ss_pred -----------------------------CCCcceeeeeecCCcEEE-EecCCCeEEEEeCCCCeEEEEEeC--------
Confidence 000011667777777766 455568999999875443322221
Q ss_pred cCCCCCceeeeEEEecCCCCCCceEEEEeec-CCcEEEEEccCCCCceEee-ecCCcceEEEEEeCCCCeE-EEecCCCc
Q 021291 199 FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-DGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGG-ISGGADQK 275 (314)
Q Consensus 199 h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~-dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l-~s~s~dg~ 275 (314)
.......|+ +.|.. |. ++++-.. .+.|.+.++. +.....+ ...-...+.|++++....| ++-...+.
T Consensus 512 ----~l~~P~gIa-VDp~~--g~-LYwtD~g~~~~I~~~~~d--G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 512 ----NGSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp ----TTCCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ----CCCCcceEE-EecCC--CC-EEEecCCCCCeEEEEecC--CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 112356676 88862 33 4444333 3778888887 4433333 3333578899999655544 44455678
Q ss_pred EEEEecCCCee
Q 021291 276 IVLYNLDHSTY 286 (314)
Q Consensus 276 i~iw~~~~~~~ 286 (314)
|...+++....
T Consensus 582 I~~~d~dG~~~ 592 (791)
T 3m0c_C 582 ISSIDVNGGNR 592 (791)
T ss_dssp EEEEETTSCSC
T ss_pred EEEEecCCCce
Confidence 99999875543
No 284
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.52 E-value=0.042 Score=48.44 Aligned_cols=204 Identities=7% Similarity=-0.120 Sum_probs=119.5
Q ss_pred CceeEEEEccCC-CEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEeCCCC
Q 021291 19 ASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~ 96 (314)
..+..++|++.+ .++.+-..++.|..++++.......+.... .....|++.+ .+..| ++-...+.|.+.++...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~--~~P~GlAvD~--~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL--DYPEGMAVDW--LGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC--CCcceEEEEe--CCCEEEEEECCCCEEEEEecCCC
Confidence 456789999854 455566678899999987544333333221 2356888876 44544 45455678999988754
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v 176 (314)
... .+......... .+++.|....++.+--+..+.|..
T Consensus 113 ~~~---~l~~~~l~~P~---------------------------------------~iavdp~~G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 113 HRQ---VLVWKDLDSPR---------------------------------------ALALDPAEGFMYWTEWGGKPKIDR 150 (628)
T ss_dssp TCE---EEECSSCCCEE---------------------------------------EEEEETTTTEEEEEECSSSCEEEE
T ss_pred cEE---EEEeCCCCCcc---------------------------------------cEEEccCCCeEEEeCCCCCCEEEE
Confidence 311 11000000000 056777655666543222467888
Q ss_pred EecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceE
Q 021291 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL 256 (314)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 256 (314)
.++........+. .-.....++ ++++ ++.+.++-...+.|..+|++. ... ..+........
T Consensus 151 ~~~dG~~~~~l~~-------------~~~~P~Gla-lD~~---~~~LY~aD~~~~~I~~~d~dG-~~~-~v~~~~l~~P~ 211 (628)
T 4a0p_A 151 AAMDGSERTTLVP-------------NVGRANGLT-IDYA---KRRLYWTDLDTNLIESSNMLG-LNR-EVIADDLPHPF 211 (628)
T ss_dssp EETTSCSCEEEEC-------------SCSSEEEEE-EETT---TTEEEEEETTTTEEEEEETTS-CSC-EEEEECCSCEE
T ss_pred EeCCCCceEEEEC-------------CCCCcceEE-Eccc---cCEEEEEECCCCEEEEEcCCC-Cce-EEeeccCCCce
Confidence 8876443322222 122456676 8886 332566666778899999874 222 34444444567
Q ss_pred EEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 257 CLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
.|++.. +..+++-...+.|...|..+++...
T Consensus 212 glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 212 GLTQYQ-DYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp EEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEEC-CEEEEecCCCCEEEEEECCCCCceE
Confidence 888876 4555666668889999977775443
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.50 E-value=0.0023 Score=57.19 Aligned_cols=218 Identities=8% Similarity=-0.036 Sum_probs=104.1
Q ss_pred CceeEEEEccCCCEEE-EecCCCeEEEEeCCC----CeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeC
Q 021291 19 ASVTDVCFHQTKPILF-AGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 93 (314)
..+..++|++.+..|+ +-...+.|+.+++.. ......+.... .....|++.+. .++++++-...+.|.++++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~--~~P~glavD~~-~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWI-HSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC----CCCEECCCS-SSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC--CCcceEEEEee-CCcEEEEeccCCeEEEEec
Confidence 3466889998655554 445567899998875 12111111111 22456788751 3344455455788999998
Q ss_pred CCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC--Cc--eee-ecCCCCCCceeccCCCceEEEee
Q 021291 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV--GE--TVD-TDSLCDSKDDVPAEGPKYMAVAG 168 (314)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~-~~~~~~~~~~~~~~~~~~~~~~g 168 (314)
....... +............+.+.... ......+....++.+.. .. .+. ..+.....++|+|++..++++ -
T Consensus 483 dg~~~~~--l~~~~~~~P~giavDp~~g~-ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~a-D 558 (699)
T 1n7d_A 483 KGVKRKT--LFREQGSKPRAIVVDPVHGF-MYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV-D 558 (699)
T ss_dssp SSCCEEE--ECCCSSCCCCCEECCSSSSC-CEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEE-E
T ss_pred CCCceEE--EEeCCCCCcceEEEccCCCc-EEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEE-e
Confidence 7643211 11111111111111111111 11111111122222221 11 111 111112229999988877764 4
Q ss_pred cCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEee
Q 021291 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (314)
Q Consensus 169 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (314)
...+.|..+|+..... ..+.. ... .......++ +.. +. ++++....+.|..+|..+ ++.+..+
T Consensus 559 ~~~~~I~~~d~dG~~~-~~~~~-------~~~--~~~~P~gla-vd~----~~-lywtd~~~~~V~~~d~~~-G~~~~~i 621 (699)
T 1n7d_A 559 SKLHSISSIDVNGGNR-KTILE-------DEK--RLAHPFSLA-VFE----DK-VFWTDIINEAIFSANRLT-GSDVNLL 621 (699)
T ss_dssp TTTTEEEEECSSSSCC-EEECC-------CSS--SCSSCCCCE-EET----TE-EEEECSTTTCEEEEETTT-EEEEECC
T ss_pred cCCCeEEEEccCCCce-EEEEe-------cCC--cCCCceEeE-EEC----CE-EEEEeCCCCeEEEEEccC-CCceEEe
Confidence 4468899999864332 22221 000 011223333 432 22 666777788999999876 6656555
Q ss_pred ecCCcceEEEEE
Q 021291 249 KVHLEPVLCLSI 260 (314)
Q Consensus 249 ~~h~~~v~~~~~ 260 (314)
.......+.|++
T Consensus 622 ~~~~~~P~~i~v 633 (699)
T 1n7d_A 622 AENLLSPEDMVL 633 (699)
T ss_dssp CTTCSSCCCCCB
T ss_pred ecCCCCCcEEEE
Confidence 433333445544
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.45 E-value=0.032 Score=45.39 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=47.3
Q ss_pred EEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeE--EEEEec-cCCcccEEEEEEcccCC---CCeEEEeec-
Q 021291 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT--VSSSWV-HSAAHGIVSVATGPSIG---LNKVISQGR- 84 (314)
Q Consensus 12 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~---~~~l~s~~~- 84 (314)
..+-..-..-..++|.|+|+++++ ..+|.|++++ +++. +..+.. .........|+++| + +..|+.+..
T Consensus 24 ~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p--df~~~g~lYv~~~~ 98 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP--RFPQEPYVYAYRTV 98 (352)
T ss_dssp EEEECCCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEEE
T ss_pred EEEECCCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC--CCCCCCEEEEEEec
Confidence 333333445679999999986655 5569999998 4442 222210 11124578999999 7 445554433
Q ss_pred C-----CeEEEEeCCC
Q 021291 85 D-----GTVKCWDIEN 95 (314)
Q Consensus 85 d-----g~v~iwd~~~ 95 (314)
. +.|..|+...
T Consensus 99 ~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLG 114 (352)
T ss_dssp CTTSSEEEEEEEEECS
T ss_pred CCCCCccEEEEEEeCC
Confidence 2 5666666653
No 287
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.43 E-value=0.067 Score=48.70 Aligned_cols=244 Identities=11% Similarity=0.050 Sum_probs=122.6
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEecc-----CCcccEEEEEEcccCCCCeEEEeecCCeEEEEe
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-----SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 92 (314)
...|.++...+++.+.+ |+.++-|.+||..+++........ -....|.++...+ ++. |..|+.+ -|.+||
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~--~g~-lWigt~~-Gl~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS--QNR-LWIGTFN-DLNIYH 288 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT--TSC-EEEEESS-CEEEEE
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC--CCC-EEEEeCC-hhheEc
Confidence 45688888888776555 444434889998776554322211 0124599999887 755 4445555 588999
Q ss_pred CCCCCCCCCC-----eeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecC-C-----CCCC---ceecc
Q 021291 93 IENGGLSSNP-----SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS-L-----CDSK---DDVPA 158 (314)
Q Consensus 93 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~---~~~~~ 158 (314)
..++....-. ...+.... ...+..+.....-....++....++........... . .... +...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~~--i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGSLSQRS--VRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp TTTTEEEEECCCTTSTTSCSSSC--EEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred CCCCeEEEEecCCCCCCCCCCCc--EEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 8765421100 00000111 111111111111111112222222222221111100 0 0111 33344
Q ss_pred CCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcC--CCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS--SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 159 ~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~--~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
+|. +.+ |+.++-|..||..+++... +.... ... .-....+.++. ..++ |+ .|..|+.++-|..|
T Consensus 367 ~g~-lWi--Gt~~~Gl~~~~~~~~~~~~-~~~~~-----~~~~~~l~~~~v~~i~-~d~~---g~-~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 367 DKN-LWI--GTNDGGLNLYNPITQRFTS-YTLQE-----DESARGIGSNNIKAVY-VDEK---KS-LVYIGTHAGGLSIL 432 (795)
T ss_dssp TSC-EEE--EESSSCEEEECTTTCCEEE-ECCC-----------CCSCSCEEEEE-EETT---TT-EEEEEETTTEEEEE
T ss_pred CCC-EEE--EECCCCeEEEcCCCCcEEE-EecCC-----CCcccCCCCccEEEEE-EcCC---CC-EEEEEeCcCceeEE
Confidence 554 332 5556679999988765332 22100 000 00123566665 5554 44 47778887789999
Q ss_pred EccCCCCceEeee-----cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 237 DIRNPGIPLTAMK-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 237 d~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
|..+ ++. ..+. .....|.++..++++.+.+.. .+| +.+|+.++++.
T Consensus 433 d~~~-~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~ 483 (795)
T 4a2l_A 433 HRNS-GQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSF 483 (795)
T ss_dssp ETTT-CCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEE
T ss_pred eCCC-CcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeE
Confidence 9886 433 2232 234579999999888755444 444 88898877654
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.41 E-value=0.017 Score=46.03 Aligned_cols=103 Identities=10% Similarity=0.036 Sum_probs=66.0
Q ss_pred cCeEEEEecC---CCceeeeecccccCCCCCcCCC-------CCceeeeEEEecCCCCCCceEEEEeecC-CcEEEEEcc
Q 021291 171 LSEVEIWDLN---TAERCTRLHQNSCGGSPNFSSK-------GRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIR 239 (314)
Q Consensus 171 d~~i~vwd~~---~~~~~~~~~~~~~~~~~~h~~~-------~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~ 239 (314)
+..|..||+. +++.+...... ..... ....+..++ ..++ |+ ..++++.. +.|..++.+
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~------~~~~~~~~~~g~~~~~~nDva-vD~~---Gn-aYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFE------KVQDEFEKKAGKRPFGVVQSA-QDRD---GN-SYVAFALGMPAIARVSAD 167 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESH------HHHHHHHHHHSSCCEEEEEEE-ECTT---SC-EEEEEEESSCEEEEECTT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCc------cccccccccccccccCCceeE-ECCC---CC-EEEeCCCCCCeEEEEeCC
Confidence 5779999998 77765544311 01000 123466776 8877 65 66777777 777777766
Q ss_pred CCCCceEeeecC------CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 240 NPGIPLTAMKVH------LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 240 ~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
++.+..+... ....+.|+++|++..|+....+|.+..+|+.+...
T Consensus 168 --G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~ 218 (334)
T 2p9w_A 168 --GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA 218 (334)
T ss_dssp --SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSC
T ss_pred --CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc
Confidence 3333332211 12367999999998887776699999999885433
No 289
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.33 E-value=0.041 Score=43.94 Aligned_cols=189 Identities=13% Similarity=0.066 Sum_probs=105.1
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCCCeeeeeccee
Q 021291 33 LFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSY 111 (314)
Q Consensus 33 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 111 (314)
|+.+.. ..|+..|+.+.+....+... ..+..++|.+ .++.|+ +-..++.|..+++............+...
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~~~---~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-- 75 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-- 75 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEECSC---SSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSS--
T ss_pred EEEECC-CeEEEEECCCcceEehhcCC---CceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC--
Confidence 443333 45899999877655544432 3478999998 555555 44456889999887521000000000000
Q ss_pred eEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeeccc
Q 021291 112 HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQN 191 (314)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 191 (314)
+..-..+++.+.+..+++ +-...+.|.++|+........+..
T Consensus 76 ------------------------------------~~~p~glavd~~~~~ly~-~d~~~~~I~~~~~~g~~~~~~~~~- 117 (316)
T 1ijq_A 76 ------------------------------------IQAPDGLAVDWIHSNIYW-TDSVLGTVSVADTKGVKRKTLFRE- 117 (316)
T ss_dssp ------------------------------------CSCCCEEEEETTTTEEEE-EETTTTEEEEEETTSSSEEEEEEC-
T ss_pred ------------------------------------CCCcCEEEEeecCCeEEE-EECCCCEEEEEeCCCCceEEEEEC-
Confidence 000000567666666665 344468899999875433222221
Q ss_pred ccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC-CcEEEEEccCCCCceEeee-cCCcceEEEEEeCCCCeE-E
Q 021291 192 SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGG-I 268 (314)
Q Consensus 192 ~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~ 268 (314)
.......++ ++|.+ |. ++++.... +.|...+++ +.....+. ..-...+.|++++++..| +
T Consensus 118 -----------~~~~P~~ia-vdp~~--g~-ly~~d~~~~~~I~~~~~d--G~~~~~~~~~~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 118 -----------NGSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp -----------TTCCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred -----------CCCCcceEE-eCCCC--CE-EEEEccCCCCeEEEEcCC--CCCeEEEEECCCCCceEEEEeccCCEEEE
Confidence 112456666 88862 33 44444333 788888886 44333332 233567899999865555 5
Q ss_pred EecCCCcEEEEecCCC
Q 021291 269 SGGADQKIVLYNLDHS 284 (314)
Q Consensus 269 s~s~dg~i~iw~~~~~ 284 (314)
+-+..+.|..+|++..
T Consensus 181 ~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGG 196 (316)
T ss_dssp EETTTTEEEEEETTSC
T ss_pred EECCCCeEEEEecCCC
Confidence 5556778999998743
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.30 E-value=0.056 Score=44.79 Aligned_cols=191 Identities=12% Similarity=0.020 Sum_probs=105.8
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEe-ecCCeEEEEeCCCCCCCCCCeeeeecce
Q 021291 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ-GRDGTVKCWDIENGGLSSNPSLTIKTNS 110 (314)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 110 (314)
+|+.+. ...|+..++........+... ..+..|+|.+ ..+.|+.+ ...+.|+.+++.................
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~---~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSC---SCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred eeEEec-cceeEEEccCCcceeEecccc---CcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 444433 357999998866554444332 3488999998 55555544 4567888888865321000000000000
Q ss_pred eeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecc
Q 021291 111 YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 190 (314)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~ 190 (314)
.. +.+ +++.+.+..+++ +-...+.|.+.++........+..
T Consensus 159 ~~-----p~g---------------------------------lavD~~~~~lY~-~d~~~~~I~~~~~~g~~~~~l~~~ 199 (400)
T 3p5b_L 159 QA-----PDG---------------------------------LAVDWIHSNIYW-TDSVLGTVSVADTKGVKRKTLFRE 199 (400)
T ss_dssp SC-----EEE---------------------------------EEEETTTTEEEE-EETTTTEEEEECTTTCSEEEEEEC
T ss_pred CC-----ccc---------------------------------EEEEecCCceEE-EECCCCeEEEEeCCCCceEEEEeC
Confidence 00 000 556665566665 444468899999875543333321
Q ss_pred cccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEe-ecCCcEEEEEccCCCCceEee-ecCCcceEEEEEeCCCCeE-
Q 021291 191 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGG- 267 (314)
Q Consensus 191 ~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g-~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l- 267 (314)
.......++ +.|.. |. ++++- +..+.|...+++. .....+ ...-...+.|++++++..|
T Consensus 200 ------------~~~~P~~ia-vdp~~--g~-ly~td~~~~~~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 200 ------------NGSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp ------------SSCCEEEEE-EETTT--TE-EEEEECSSSCCEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ------------CCCCcceEE-Eeccc--Ce-EEEEeCCCCCEEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEE
Confidence 112355666 88862 33 44443 2347888888873 333333 3333567899999766555
Q ss_pred EEecCCCcEEEEecCCCe
Q 021291 268 ISGGADQKIVLYNLDHST 285 (314)
Q Consensus 268 ~s~s~dg~i~iw~~~~~~ 285 (314)
++-+..+.|..+|++...
T Consensus 262 ~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 262 WVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEETTTTEEEEEETTSCC
T ss_pred EEECCCCEEEEEeCCCCc
Confidence 444556789999987543
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.27 E-value=0.086 Score=46.42 Aligned_cols=207 Identities=6% Similarity=-0.093 Sum_probs=112.8
Q ss_pred CceeEEEEccCCCEE-EEecCCCeEEEEeCCCCeE-EEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCC
Q 021291 19 ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIEN 95 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~ 95 (314)
+....++|++.+..| .+=...+.|..++++.... ...+.... .....|++.+ .++.|+ +-...+.|.+.++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~--~~P~GlAvD~--~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDW--LGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC--SCEEEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC--CCcCeEEEEe--cCCEEEEEeCCCCEEEEEECCC
Confidence 456789999855544 4545577898898875432 22232221 3378999987 555555 445578899999875
Q ss_pred CCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEE
Q 021291 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVE 175 (314)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 175 (314)
..... +.. . .+....++++.|.+..++.+--...+.|.
T Consensus 116 ~~~~~--l~~-~---------------------------------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~ 153 (619)
T 3s94_A 116 SLRKV--LFW-Q---------------------------------------ELDQPRAIALDPSSGFMYWTDWGEVPKIE 153 (619)
T ss_dssp CSCEE--EEC-S---------------------------------------SCSCCCCEEEETTTTEEEEEECSSSCEEE
T ss_pred CCEEE--EEe-C---------------------------------------CCCCCceEEEecCCCeEEEeccCCCCEEE
Confidence 43210 000 0 00011116787876666654322246777
Q ss_pred EEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcce
Q 021291 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (314)
Q Consensus 176 vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (314)
..++.... ...+.. . .-.....++ ++|++ ++ ++++-...+.|..+|+.. ........+.....
T Consensus 154 r~~~dG~~-~~~l~~-------~----~~~~P~Gla-ld~~~--~~-LY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P 216 (619)
T 3s94_A 154 RAGMDGSS-RFIIIN-------S----EIYWPNGLT-LDYEE--QK-LYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHP 216 (619)
T ss_dssp EEETTSCS-CEEEEC-------S----SCSSEEEEE-EETTT--TE-EEEEETTTCCEEEESSSC-CEEC---------C
T ss_pred EEECCCCc-eEEEEe-------C----CCCCCcEEE-EEccC--CE-EEEEeCCCCeEEEecCCC-CccEEEEeCCCCCc
Confidence 77765332 222221 0 122456676 88762 33 556666678899998874 22222222122233
Q ss_pred EEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
..|++..+ ..+++-...+.|...|..+++....
T Consensus 217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 217 FALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp CCEEESSS-EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred eEEEEeCC-EEEEecCCCCEEEEEECCCCcccEE
Confidence 56777766 4556666778899999888765443
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.23 E-value=0.055 Score=43.27 Aligned_cols=181 Identities=15% Similarity=0.033 Sum_probs=101.5
Q ss_pred CCeEEEEeCCCCe--EEEEEeccCCcccEEEEEEcccCCCCeEE-EeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEE
Q 021291 39 GGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCK 115 (314)
Q Consensus 39 dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 115 (314)
...|+..+++... ....+... ..+..++|.+ ..+.|+ +-...+.|..+++....... ........
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~---~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~----- 79 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGL---EDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLL----- 79 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEE---EEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCS-----
T ss_pred cCeEEEEECCCCceEEEEEecCC---CccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCC-----
Confidence 4579999987653 22222222 3367999998 545554 44557789999887653211 00000000
Q ss_pred eeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCC
Q 021291 116 LSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGG 195 (314)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~ 195 (314)
.+ ..+++.+.+..++. +-...+.|.++++........+..
T Consensus 80 -~p---------------------------------~glavd~~~g~ly~-~d~~~~~I~~~~~dG~~~~~l~~~----- 119 (318)
T 3sov_A 80 -SP---------------------------------DGLACDWLGEKLYW-TDSETNRIEVSNLDGSLRKVLFWQ----- 119 (318)
T ss_dssp -CC---------------------------------CEEEEETTTTEEEE-EETTTTEEEEEETTSCSCEEEECS-----
T ss_pred -Cc---------------------------------cEEEEEcCCCeEEE-EECCCCEEEEEECCCCcEEEEEeC-----
Confidence 00 00556666666665 344467899999865432222211
Q ss_pred CCCcCCCCCceeeeEEEecCCCCCCceEEEEe-ecCCcEEEEEccCCCCceEee-ecCCcceEEEEEeCCCCe-EEEecC
Q 021291 196 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNG-GISGGA 272 (314)
Q Consensus 196 ~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g-~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~-l~s~s~ 272 (314)
.......++ +.|.+ |. ++++- +..+.|...+++ +.....+ ...-...+.|++++++.. .++-+.
T Consensus 120 -------~~~~P~gia-vdp~~--g~-ly~td~~~~~~I~r~~~d--G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 120 -------ELDQPRAIA-LDPSS--GF-MYWTDWGEVPKIERAGMD--GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp -------SCSSEEEEE-EEGGG--TE-EEEEECSSSCEEEEEETT--SCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -------CCCCccEEE-EeCCC--CE-EEEEecCCCCEEEEEEcC--CCCeEEEEECCCCCccEEEEeccCCEEEEEECC
Confidence 122345666 88762 33 34443 235788888887 3333333 222345689999985544 455566
Q ss_pred CCcEEEEecCCC
Q 021291 273 DQKIVLYNLDHS 284 (314)
Q Consensus 273 dg~i~iw~~~~~ 284 (314)
.+.|..++++..
T Consensus 187 ~~~I~~~d~dG~ 198 (318)
T 3sov_A 187 LNFIHKSNLDGT 198 (318)
T ss_dssp TTEEEEEETTSC
T ss_pred CCEEEEEcCCCC
Confidence 788999998743
No 293
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=0.15 Score=46.32 Aligned_cols=242 Identities=10% Similarity=0.004 Sum_probs=119.7
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEe-------ccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-------VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
...|.++...++|. |-.|+.++-|..++..++....... ..-....|.++...+ ++ .|..|+.++-|..
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g-~lWigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QG-KLWIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TS-CEEEEEBSSCEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CC-CEEEEeCCCcEEE
Confidence 45789999988886 4556766668899877654332111 010124589998877 64 4666676667889
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccC--CceeeecCC--CCCC---ceeccCCCce
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV--GETVDTDSL--CDSK---DDVPAEGPKY 163 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~---~~~~~~~~~~ 163 (314)
||..++.... . ............++........-.......++.+.. ......... .... +...+++. +
T Consensus 388 ~~~~~~~~~~--~-~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-l 463 (781)
T 3v9f_A 388 FENGKRVAIY--N-KENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-I 463 (781)
T ss_dssp EETTEEEEEC--C------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-E
T ss_pred EECCCCeEEE--c-cCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-E
Confidence 9987653211 0 000000000111111111111111111122333322 221111111 1111 33334443 4
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCC
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (314)
.+ |+. +-|..||..+++....... .........+.++. ..++ |. |..|+.++-|..||.++ ++
T Consensus 464 wi--gt~-~Gl~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~i~-~d~~---g~--lWigt~~~Gl~~~~~~~-~~ 526 (781)
T 3v9f_A 464 WI--GTH-AGVFVIDLASKKVIHHYDT-------SNSQLLENFVRSIA-QDSE---GR--FWIGTFGGGVGIYTPDM-QL 526 (781)
T ss_dssp EE--EET-TEEEEEESSSSSCCEEECT-------TTSSCSCSCEEEEE-ECTT---CC--EEEEESSSCEEEECTTC-CE
T ss_pred EE--EEC-CceEEEeCCCCeEEecccC-------cccccccceeEEEE-EcCC---CC--EEEEEcCCCEEEEeCCC-Ce
Confidence 33 333 4589999887654322211 00001123566665 5554 54 55555544577888765 32
Q ss_pred ceEeeec----CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 244 PLTAMKV----HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 244 ~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
...+.. ....|.++..+++|.+.++. .+|.|..||..+++.
T Consensus 527 -~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 527 -VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY 571 (781)
T ss_dssp -EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred -EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence 333321 23578999999998855544 467558888876653
No 294
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.09 E-value=0.073 Score=42.17 Aligned_cols=187 Identities=14% Similarity=0.058 Sum_probs=101.1
Q ss_pred eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCC
Q 021291 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (314)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (314)
+.+..+... .....++|.+ +++++++-..++.|..||..... ......... +..
T Consensus 23 ~~~~~~p~~---~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~~-----~~~~~~~~~------p~g---------- 76 (306)
T 2p4o_A 23 KIITSFPVN---TFLENLASAP--DGTIFVTNHEVGEIVSITPDGNQ-----QIHATVEGK------VSG---------- 76 (306)
T ss_dssp EEEEEECTT---CCEEEEEECT--TSCEEEEETTTTEEEEECTTCCE-----EEEEECSSE------EEE----------
T ss_pred eEeEeCCCC---CCcceEEECC--CCCEEEEeCCCCeEEEECCCCce-----EEEEeCCCC------cee----------
Confidence 444455332 3378999999 87866676678899999987531 111111100 000
Q ss_pred CCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCc-CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeee
Q 021291 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA 209 (314)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 209 (314)
+++.++|+ ++++....+ ..|..+|..+++....... .. ......
T Consensus 77 -----------------------ia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~-------~~----~~~~~g 121 (306)
T 2p4o_A 77 -----------------------LAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL-------PD----AIFLNG 121 (306)
T ss_dssp -----------------------EEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC-------TT----CSCEEE
T ss_pred -----------------------EEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC-------CC----ccccCc
Confidence 56788887 444333222 2577778777765432221 00 111222
Q ss_pred EEEecCCCCCCceEEEEeecCCcEEEEEccCCCC-ceEeee---------cCCcceEEEEEeCCCCeE-EEecCCCcEEE
Q 021291 210 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-PLTAMK---------VHLEPVLCLSIDESCNGG-ISGGADQKIVL 278 (314)
Q Consensus 210 ~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~---------~h~~~v~~~~~~~~~~~l-~s~s~dg~i~i 278 (314)
+. ..+. +. .+++...++.|+++|... +. .+.... ..-...+.+ ++++.+| ++-...+.|..
T Consensus 122 ~~-~~~~---~~-~~v~d~~~g~i~~~d~~~-~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~ 193 (306)
T 2p4o_A 122 IT-PLSD---TQ-YLTADSYRGAIWLIDVVQ-PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLR 193 (306)
T ss_dssp EE-ESSS---SE-EEEEETTTTEEEEEETTT-TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEE
T ss_pred cc-ccCC---Cc-EEEEECCCCeEEEEeCCC-CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEE
Confidence 32 3332 32 455555688899998764 21 111000 111234556 6777544 56666789999
Q ss_pred EecCC-Ce----eeE----eeeeeeecCCCceeceee
Q 021291 279 YNLDH-ST----YVL----FGIGFVCDQEGNKFGTTW 306 (314)
Q Consensus 279 w~~~~-~~----~~~----~~~~~~~~~~~~~~~~~w 306 (314)
++++. ++ .++ ...+++.+++|..+.+.|
T Consensus 194 ~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp EEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECB
T ss_pred EEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeC
Confidence 99875 32 111 134567778887766655
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.08 E-value=0.078 Score=42.26 Aligned_cols=216 Identities=9% Similarity=0.101 Sum_probs=114.1
Q ss_pred EecCCCCceeEEEEcc-CCCEEEEecCCCeEEEEeCCCCeEEEE-Eec----cCCcccEEEEEE---cccCCCCeEEEee
Q 021291 13 VLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSS-SWV----HSAAHGIVSVAT---GPSIGLNKVISQG 83 (314)
Q Consensus 13 ~l~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~----~~~~~~v~~~~~---~~~~~~~~l~s~~ 83 (314)
.+.+..---.+++|.+ ++.++++.-..|+|..||...+..... +.. ......+..|.| .| ++.++++..
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~--~grL~vv~~ 84 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN--SKRLFAVMK 84 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS--CCEEEEEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC--CCcEEEEEc
Confidence 4445555567899988 455555555899999999875543333 221 111124689999 57 756666433
Q ss_pred -------------cCCeEEEEeCC---CCCCCCCCeeeeecce---------eeEEEeeeeeccccccccCCCCcceeec
Q 021291 84 -------------RDGTVKCWDIE---NGGLSSNPSLTIKTNS---------YHFCKLSLVKEPYANAKQANEPKDCYER 138 (314)
Q Consensus 84 -------------~dg~v~iwd~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (314)
.+..|..||+. +++... ...+.... .......
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~--~~dL~~~~~~~~~~~g~~~~~~nD--------------------- 141 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVW--SVNFEKVQDEFEKKAGKRPFGVVQ--------------------- 141 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSE--EEESHHHHHHHHHHHSSCCEEEEE---------------------
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEE--EecCccccccccccccccccCCce---------------------
Confidence 16789999998 665433 11211100 0000000
Q ss_pred cCCceeeecCCCCCCceeccCCCceEEEeecCc-CeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCC
Q 021291 139 EVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~ 217 (314)
++..++|+-.+ +++.. +.|...+.... .+..+.... . ..........+. ++|+
T Consensus 142 ---------------vavD~~GnaYV--t~s~~~~~I~rV~pdG~-~~~~~~~~~-----~-~~~~~~G~nGIv-~~pd- 195 (334)
T 2p9w_A 142 ---------------SAQDRDGNSYV--AFALGMPAIARVSADGK-TVSTFAWES-----G-NGGQRPGYSGIT-FDPH- 195 (334)
T ss_dssp ---------------EEECTTSCEEE--EEEESSCEEEEECTTSC-CEEEEEECC-----C-CSSSCCSCSEEE-EETT-
T ss_pred ---------------eEECCCCCEEE--eCCCCCCeEEEEeCCCC-EEeeeeecC-----C-CcccccCcceEE-EeCC-
Confidence 45667776443 45555 66777766533 222221100 0 000122344565 9998
Q ss_pred CCCceEEEEeecCCcEEEEEccCCCC-ceEeee--cC---CcceEEE-EEeCCCCe-EEEecCCCcEEEEecCC
Q 021291 218 SQGFVNVLAGYEDGSILVWDIRNPGI-PLTAMK--VH---LEPVLCL-SIDESCNG-GISGGADQKIVLYNLDH 283 (314)
Q Consensus 218 ~~g~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~--~h---~~~v~~~-~~~~~~~~-l~s~s~dg~i~iw~~~~ 283 (314)
|..+++..+ .|.|..+|++.+.. ++. +. +. -.....| ....+|+. |++.+..+.+.+.+-+.
T Consensus 196 --g~~Liv~~~-~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 196 --SNKLIAFGG-PRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp --TTEEEEESS-SSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred --CCEEEEEcC-CCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 553444445 99999999985322 121 21 21 1123333 33456666 56655666666655443
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.07 E-value=0.17 Score=45.98 Aligned_cols=238 Identities=9% Similarity=-0.016 Sum_probs=116.8
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEe-------c-----cCCcccEEEEEEcccCCCCeEEEeecC
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-------V-----HSAAHGIVSVATGPSIGLNKVISQGRD 85 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (314)
...|.++...++|. |..|+..+-|.++|..+++...... . .-....|.++...+ ++ .|..|+.+
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g-~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FN-NIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS--SC-CEEEEEBS
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CC-CEEEEecC
Confidence 35688888888775 4456664458889987655332211 0 00114589998887 64 46677777
Q ss_pred CeEEEEeCCCCCCCCCCeeeee-----cc---eeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCC---C-CCC
Q 021291 86 GTVKCWDIENGGLSSNPSLTIK-----TN---SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL---C-DSK 153 (314)
Q Consensus 86 g~v~iwd~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 153 (314)
+-|..++..+..... +... .. ......+........-....+.....++..... ...+. . ...
T Consensus 333 ~Gl~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 333 GGINFISNAPPTFHT---WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV--AIYNKENRELLSN 407 (781)
T ss_dssp SCEEEECSSCCSCEE---EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEE--EECC-----CCCS
T ss_pred CeEEEeCCCCCccee---eccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCe--EEEccCCCCCCCc
Confidence 778899887654311 1000 00 001111111111111111112222222222111 11111 0 111
Q ss_pred ----ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeec
Q 021291 154 ----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (314)
Q Consensus 154 ----~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (314)
+...++|. +.+ |+.++-|..+|.++++.. .+.. . ......+.++. ..++ |. |..|+.
T Consensus 408 ~v~~i~~d~~g~-lWi--gt~~~Gl~~~~~~~~~~~-~~~~-------~--~~~~~~v~~i~-~d~~---g~--lwigt~ 468 (781)
T 3v9f_A 408 SVLCSLKDSEGN-LWF--GTYLGNISYYNTRLKKFQ-IIEL-------E--KNELLDVRVFY-EDKN---KK--IWIGTH 468 (781)
T ss_dssp BEEEEEECTTSC-EEE--EETTEEEEEECSSSCEEE-ECCS-------T--TTCCCCEEEEE-ECTT---SE--EEEEET
T ss_pred ceEEEEECCCCC-EEE--EeccCCEEEEcCCCCcEE-Eecc-------C--CCCCCeEEEEE-ECCC---CC--EEEEEC
Confidence 33334443 443 444467999998776532 2221 0 11123466655 5544 53 555555
Q ss_pred CCcEEEEEccCCCCceEeeecC-----CcceEEEEEeCCCCeEEEecCCCcEEEEecCCCee
Q 021291 230 DGSILVWDIRNPGIPLTAMKVH-----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTY 286 (314)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~ 286 (314)
+-|..||..+ ++........ ...|.++..+++|.+.+ |+.++-|..||.++++.
T Consensus 469 -~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 469 -AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLV 527 (781)
T ss_dssp -TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEE
T ss_pred -CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeE
Confidence 5688899876 4433222211 35799999999987544 44433477788776543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.04 E-value=0.12 Score=43.88 Aligned_cols=63 Identities=10% Similarity=-0.012 Sum_probs=41.7
Q ss_pred EEEEeecCCcEEEEEccCCCCceEeeecC------------------------CcceEEEEEeCC-CCeEEEecCCCcEE
Q 021291 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVH------------------------LEPVLCLSIDES-CNGGISGGADQKIV 277 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~h------------------------~~~v~~~~~~~~-~~~l~s~s~dg~i~ 277 (314)
++++-..++.|+.++. + + .+.++-+. -.....|+++++ +.++++=.....|+
T Consensus 393 lyVaD~~N~rIr~i~~-~-G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIr 469 (496)
T 3kya_A 393 FYFVDRLNFCVRKVTP-E-G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIR 469 (496)
T ss_dssp EEEEEGGGTEEEEECT-T-C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCEEEEEeC-C-C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 6666677888999984 3 4 34444332 023678999986 77777777788899
Q ss_pred EEecCCCeeeE
Q 021291 278 LYNLDHSTYVL 288 (314)
Q Consensus 278 iw~~~~~~~~~ 288 (314)
.++++....+.
T Consensus 470 ki~~~~~~~~~ 480 (496)
T 3kya_A 470 TISMEQEENVA 480 (496)
T ss_dssp EEEECCCC---
T ss_pred EEECCCCcccc
Confidence 99988765543
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.97 E-value=0.11 Score=42.13 Aligned_cols=52 Identities=12% Similarity=0.033 Sum_probs=34.8
Q ss_pred CcceEEEEEeCCCCeEE-EecCCCcEEEEecCCCeeeE---------eeeeeeecCC-Cceec
Q 021291 252 LEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTYVL---------FGIGFVCDQE-GNKFG 303 (314)
Q Consensus 252 ~~~v~~~~~~~~~~~l~-s~s~dg~i~iw~~~~~~~~~---------~~~~~~~~~~-~~~~~ 303 (314)
-..-+.++|+||++.|. +-+..+.|..|+++....+. ..-+++.+++ |....
T Consensus 220 l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 220 FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 34568999999997664 44567899999987432221 1244667774 77665
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.96 E-value=0.11 Score=42.14 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=47.6
Q ss_pred EEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCe-EEEEEe-ccCCcccEEEEEEcccCC---CCeEEEeec--
Q 021291 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-TVSSSW-VHSAAHGIVSVATGPSIG---LNKVISQGR-- 84 (314)
Q Consensus 12 ~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~-~~~~~~~v~~~~~~~~~~---~~~l~s~~~-- 84 (314)
..+-.--.....++|.|+|+++++ ..+|.|++++ .+++ .+..+. ..........|+++| + +..|+.+..
T Consensus 22 ~~va~~l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~p--df~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHP--EFPKKSWVYLYASYF 97 (354)
T ss_dssp EEEECSCSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEEEE
T ss_pred EEEeCCCCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCC--CCCcCCEEEEEEecc
Confidence 333333456789999999975554 5569999997 4555 222211 011224488999999 6 445544332
Q ss_pred --C----CeEEEEeCCC
Q 021291 85 --D----GTVKCWDIEN 95 (314)
Q Consensus 85 --d----g~v~iwd~~~ 95 (314)
+ ..|..|+...
T Consensus 98 ~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp CGGGCEEEEEEEEEECS
T ss_pred CCCCCcceEEEEEEECC
Confidence 2 4566666654
No 300
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.005 Score=49.50 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=44.0
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEccc-CCCCeEEEe-ecCCeEEEEeCCCCC
Q 021291 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS-IGLNKVISQ-GRDGTVKCWDIENGG 97 (314)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~-~~dg~v~iwd~~~~~ 97 (314)
.+++.++.||.|.-.|.++|+.+.+++.... .++....-... .++..++.. +.||.|..+|..++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~-~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF-QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS-CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc-CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 4788899999999999999999999876510 12322211110 022333333 689999999988773
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.75 E-value=0.41 Score=45.49 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=61.4
Q ss_pred CCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEcc
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (314)
+.+++++.| .+|++|++...+.+. ... .+-. ...+..+. .. |. ++++|..-..|.++..+
T Consensus 895 ~g~Lla~ig---~~l~vy~l~~~~~L~-~~~-------~~~~--~i~~~~l~-~~-----~~-~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 895 NGKLLASIN---STVRLYEWTTEKELR-TEC-------NHYN--NIMALYLK-TK-----GD-FILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp TTEEEEEET---TEEEEEEECTTSCEE-EEE-------EECC--CSCEEEEE-EE-----TT-EEEEEESSBCEEEEEEE
T ss_pred CCEEEEEcC---CEEEEEECCCCceEE-EEe-------eccc--cEEEEEEe-cc-----CC-EEEEEEhhheEEEEEEE
Confidence 345665333 789999998665443 110 1100 11122333 22 33 78899888888887665
Q ss_pred CCCCceEeee--cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCC
Q 021291 240 NPGIPLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 240 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
.....+..+. .+..+++++.|-.+. .++.+..+|.+.+...+.
T Consensus 955 ~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 955 PMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp TTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred cCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 4233333333 345678899884443 577788999999997765
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.62 E-value=0.19 Score=39.97 Aligned_cols=239 Identities=12% Similarity=0.131 Sum_probs=132.3
Q ss_pred EEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCe
Q 021291 24 VCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPS 103 (314)
Q Consensus 24 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 103 (314)
.-.+|..+.+|.=. ..++.|+|+++.+.+..+... +.|.-=.|-. + +.|+-.. +..|.-|+++...... .+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~---e~VvfWkWis--~-~~L~lVT-~taVyHWs~~~~s~P~-kv 142 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS--L-NTVALVT-DNAVYHWSMEGESQPV-KM 142 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS---SCEEEEEECS--S-SEEEEEE-SSEEEEEESSTTCCCE-EE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC---CccEEEEecC--C-CeEEEEc-CCcEEEEcccCCCCCc-ee
Confidence 44578777777654 578999999999998887765 3477777765 4 5666555 4589999997633111 02
Q ss_pred eeeecceeeEEEe--eeeecc--ccc---cccC---CCCcceeeccCCceeeecCCCCCC--ceeccCCC----ceEEEe
Q 021291 104 LTIKTNSYHFCKL--SLVKEP--YAN---AKQA---NEPKDCYEREVGETVDTDSLCDSK--DDVPAEGP----KYMAVA 167 (314)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~~~--~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~ 167 (314)
+..+..-.....+ ...... ... .... .+....+.. .+.....+++|.. ..+-.+|. .+++.+
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~--er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 220 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV--DRKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 220 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET--TTTEEEEECCSEEEEEEECCTTCSSCEEEEEEE
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEee--cccccceeeeeeeeeEEEecCCCCCCceEEEEE
Confidence 2222111111111 111100 000 0001 122222222 2334444555555 33333332 233322
Q ss_pred --ecCcCeEEEEecCCC---ce-----eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEE
Q 021291 168 --GEQLSEVEIWDLNTA---ER-----CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (314)
Q Consensus 168 --g~~d~~i~vwd~~~~---~~-----~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (314)
+...+++.+-++... .. ...+. --++.......++. .++.. | .++.-+.-|.|++||
T Consensus 221 ~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~--------fppea~~DFPVamq-vs~ky--g--viyviTK~G~ihlyD 287 (365)
T 2xzh_A 221 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF--------FPPEAQNDFPVAMQ-ISEKH--D--VVFLITKYGYIHLYD 287 (365)
T ss_dssp EEETTEEEEEEEECSSCCTTCCCCCCEEEEEC--------CCTTCTTCCEEEEE-EETTT--T--EEEEEETTSEEEEEE
T ss_pred EecCCCcEEEEEEcCCCCCCCCCcccccceee--------CCccccCCceEEEE-ecccC--C--EEEEEeCCcEEEEEE
Confidence 112257888887432 11 11111 01122344566666 66652 3 677777889999999
Q ss_pred ccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeee
Q 021291 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
+.+ +.++..-+-..++|..-+.+.+..-++.....|.|.--.++..+.+
T Consensus 288 leT-gt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 288 LET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp TTT-CCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred ccc-CcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 999 8888887777788877666555445666668888887777766544
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.43 E-value=0.13 Score=42.46 Aligned_cols=116 Identities=11% Similarity=0.109 Sum_probs=72.5
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCce------------eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCc
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER------------CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~------------~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~ 221 (314)
+..+|+|+.+. +.|. ..|.|-.+..+.. .+.+... .........+..+. |+|-+..+.
T Consensus 71 lvlSpsG~lLA-l~g~--~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~------~~~~~~~s~I~qVl-WHPl~~~ds 140 (452)
T 3pbp_A 71 VISSTSGDLLC-LFND--NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID------EEEVGPKSSIKKVL-FHPKSYRDS 140 (452)
T ss_dssp EEECTTSSEEE-EECS--SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG------GCC--CCCCEEEEE-ECTTBGGGC
T ss_pred EEECCCCCEEE-EecC--CeEEEEEecCccccCcccccccccceeEEEcC------CcccCCCCceeEEE-eccccCCCC
Confidence 56889997554 4564 6899888773321 1122210 00011245688887 999876555
Q ss_pred eEEEEeecCCcEEEEEccC-CCCceEeee---------cCCcceEEEEEeCCCCeEEE--ecCCCcEEEEec
Q 021291 222 VNVLAGYEDGSILVWDIRN-PGIPLTAMK---------VHLEPVLCLSIDESCNGGIS--GGADQKIVLYNL 281 (314)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~-~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s--~s~dg~i~iw~~ 281 (314)
.|++-..|+.|++||+.. ...|. .++ .....|.+++|.+++..|.. .+..|.|+-...
T Consensus 141 -~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlcP 210 (452)
T 3pbp_A 141 -CIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFYP 210 (452)
T ss_dssp -EEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred -eEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence 899999999999999985 22333 232 22357889999887766655 446677665443
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.40 E-value=0.28 Score=39.47 Aligned_cols=109 Identities=11% Similarity=0.201 Sum_probs=65.2
Q ss_pred eEEEeecC--cCeEEEEec--CCCceeeeecccccCCCCCcC--CCCCceeeeEEEe-cCCCCCCceEEEEeecCCcEEE
Q 021291 163 YMAVAGEQ--LSEVEIWDL--NTAERCTRLHQNSCGGSPNFS--SKGRGMCMAVQAY-LPSKSQGFVNVLAGYEDGSILV 235 (314)
Q Consensus 163 ~~~~~g~~--d~~i~vwd~--~~~~~~~~~~~~~~~~~~~h~--~~~~~~~~~~~~~-~p~~~~g~~~l~~g~~dg~i~v 235 (314)
+++++... +++|.+|++ .+++ +..+... .++ .. ...++.++.| +|. .+..++++...+|.+..
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~------~~pv~t~-~~~pyGlcly~~~~--~g~~yafV~~k~G~~~q 157 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP------DHPIATA-INEVYGFTLYHSQK--TGKYYAMVTGKEGEFEQ 157 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCC-EEECSCT------TSCEECC-CSSCCCEEEEECTT--TCCEEEEEECSSSEEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCc-eeecccc------ccCcCCC-CCCeeEEEEEecCC--CCcEEEEEECCCCeEEE
Confidence 34445554 588999966 3433 4433210 000 00 0233334313 453 25557888888999999
Q ss_pred EEccCC------CCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecC
Q 021291 236 WDIRNP------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (314)
Q Consensus 236 wd~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~ 282 (314)
|++... .+.++++.. ...+..+..++....|..+-.|.-|..++.+
T Consensus 158 ~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 158 YELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 998421 345666664 4578889999888888888888666555544
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.30 E-value=0.34 Score=40.05 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=56.0
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCe------------EEEEEeccC----CcccEEEEEEcccC-CCCeEEEe
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------------TVSSSWVHS----AAHGIVSVATGPSI-GLNKVISQ 82 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~------------~~~~~~~~~----~~~~v~~~~~~~~~-~~~~l~s~ 82 (314)
.|..+..+|+|++||..+.. .|.|-.+..+. ..+.+.... ...+|..+.|+|-. .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 68889999999999988665 78898887321 123333221 12569999999931 24589999
Q ss_pred ecCCeEEEEeCCCC
Q 021291 83 GRDGTVKCWDIENG 96 (314)
Q Consensus 83 ~~dg~v~iwd~~~~ 96 (314)
..|++|++||+...
T Consensus 146 tsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 146 KEDDTITMFDILNS 159 (452)
T ss_dssp ETTSCEEEEETTCT
T ss_pred ecCCEEEEEEcccC
Confidence 99999999999873
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.15 E-value=0.35 Score=38.01 Aligned_cols=65 Identities=12% Similarity=0.150 Sum_probs=35.8
Q ss_pred CCCEEEEec-CC-----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-----CeEEEEeCCCCC
Q 021291 29 TKPILFAGT-TG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-----GTVKCWDIENGG 97 (314)
Q Consensus 29 ~~~~l~s~~-~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~ 97 (314)
++.+++.|+ .+ ..+.+||..+.+....-........- +++. . ++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-ASVS-L--HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-E--TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cEEE-E--CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 445666676 32 36889998877543321111110111 2222 2 44677777755 358888888765
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.12 E-value=0.36 Score=37.95 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=35.4
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC-----eEEEEeCCCCC
Q 021291 29 TKPILFAGTTG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG-----TVKCWDIENGG 97 (314)
Q Consensus 29 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~ 97 (314)
++.+++.|+.+ ..+.+||..+.+....-........-..+.+ ++..++.|+.++ .+.+||+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 56667777754 3588899887654432221111111122222 446777777553 47778877654
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.99 E-value=0.45 Score=37.90 Aligned_cols=223 Identities=11% Similarity=0.071 Sum_probs=117.6
Q ss_pred cCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEe
Q 021291 37 TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKL 116 (314)
Q Consensus 37 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 116 (314)
+.+.+|.|-|+.++..+.+-.... -+.-.+| ..+.++.-. ..+++++|+++.+..+ .+.+.. ......+
T Consensus 46 ~~~~~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP--~~~ViALra-g~~LQiFnletK~klk--s~~~~e-~VvfWkW 114 (365)
T 2xzh_A 46 GEQAQVVIIDMNDPSNPIRRPISA-----DSAIMNP--ASKVIALKA-GKTLQIFNIEMKSKMK--AHTMTD-DVTFWKW 114 (365)
T ss_dssp TTEEEEEEEETTSTTSCEEEECCC-----SEEEECS--SSSEEEEEE-TTEEEEEETTTTEEEE--EEECSS-CEEEEEE
T ss_pred CCCCEEEEEECCCCCCcccccccc-----ceeeeCC--CccEEEEec-CCeEEEechHHhhhhc--ceecCC-ccEEEEe
Confidence 334478899998765443222111 1333477 656555444 6799999999986443 222221 1111111
Q ss_pred eeeeccccccccCCCCcceeeccCCceeeecCCCCCC--------ceeccCCCceEEEeec-----CcCeEEEEecCCCc
Q 021291 117 SLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--------DDVPAEGPKYMAVAGE-----QLSEVEIWDLNTAE 183 (314)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~-----~d~~i~vwd~~~~~ 183 (314)
-++.............|.+.....+...+..|.. ...+++.+-++++.-+ -.|.+.+|..+.+
T Consensus 115 ---is~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~- 190 (365)
T 2xzh_A 115 ---ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 190 (365)
T ss_dssp ---CSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-
T ss_pred ---cCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-
Confidence 1222333444455566666554444444443333 3345665544443211 2467889987643
Q ss_pred eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCc-eEEEEeec---CCcEEEEEccCC--CCce---Ee---ee--
Q 021291 184 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF-VNVLAGYE---DGSILVWDIRNP--GIPL---TA---MK-- 249 (314)
Q Consensus 184 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~-~~l~~g~~---dg~i~vwd~~~~--~~~~---~~---~~-- 249 (314)
..+.+. ||.. .- ..+..++.... .+++.+.. .+.++|-++..+ +.+. +. +-
T Consensus 191 ~sQ~ie--------Ghaa----~F---~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp 255 (365)
T 2xzh_A 191 VSQPIE--------GHAA----SF---AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 255 (365)
T ss_dssp EEEEEC--------CSEE----EE---EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT
T ss_pred ccceee--------eeee----ee---EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc
Confidence 334444 5521 11 11322221111 13333322 258999998643 2111 11 11
Q ss_pred -cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 250 -VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 250 -~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
+..+---++..++....+..-..-|.|++||++++..++.
T Consensus 256 ea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 256 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp TCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 1234456677787777788888899999999999999986
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.91 E-value=0.45 Score=37.31 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=33.4
Q ss_pred EEEEeecC-----CcEEEEEccCCCCceEeee---cCCcceEEEEEeCCCCeEEEecCC-----CcEEEEecCCCee
Q 021291 223 NVLAGYED-----GSILVWDIRNPGIPLTAMK---VHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTY 286 (314)
Q Consensus 223 ~l~~g~~d-----g~i~vwd~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~d-----g~i~iw~~~~~~~ 286 (314)
+++.|+.+ ..+.+||+.+ .+ -..+. ........+.+ +++.++.|+.+ ..+.+||+++.+-
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRT-DS-WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EEEEeCCCCCcccceEEEEeCCC-Cc-EEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 66677654 4689999886 32 12221 11111122222 55677777765 3578888887653
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.83 E-value=0.5 Score=37.19 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=37.4
Q ss_pred CCCEEEEecCC----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC------CeEEEEeCCCCC
Q 021291 29 TKPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD------GTVKCWDIENGG 97 (314)
Q Consensus 29 ~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~ 97 (314)
++.+++.|+.+ ..+.+||..+.+....-........-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777754 6788999888765433222211111222222 44677777765 457888887764
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.60 E-value=0.61 Score=36.58 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=33.2
Q ss_pred CCEEEEecCC----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC-----eEEEEeCCCCC
Q 021291 30 KPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG-----TVKCWDIENGG 97 (314)
Q Consensus 30 ~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~ 97 (314)
+.+++.|+.+ ..+.+||..+.+....-....... -.+++. - ++..++.|+.++ .+.+||..+.+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRC-RAGMVY-M--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEE-E--TTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccc-cceEEE-E--CCEEEEEeCcCCCccccceEEECCCCCc
Confidence 3455566643 358899988775433211111101 112222 2 446777777543 47777877654
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.42 E-value=0.78 Score=36.63 Aligned_cols=66 Identities=14% Similarity=0.092 Sum_probs=39.2
Q ss_pred eeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee---cCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK---VHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
.+.++. +.|+ +. +++++ .+|.| ++..+. ++--..+. .....+.++.|.+++. ++.++.+|.|.-++
T Consensus 251 ~~~~v~-~~~~---~~-~~~~g-~~g~i-~~S~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 251 GFLDLA-YRTP---NE-VWLAG-GAGAL-LCSQDG-GQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CEEEEE-ESSS---SC-EEEEE-STTCE-EEESST-TSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ceEEEE-ecCC---CE-EEEEe-CCCeE-EEeCCC-CcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 356676 7765 43 45544 46766 345443 44433333 2345678898976555 56667889776665
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.39 E-value=0.99 Score=37.56 Aligned_cols=240 Identities=11% Similarity=0.121 Sum_probs=132.9
Q ss_pred EEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCC
Q 021291 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNP 102 (314)
Q Consensus 23 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 102 (314)
+.-.+|..+.+|-=. ..++.|+|+++...+..+...+ .|.-=.|-. + +.|+-.+ +..|.-|+++...... .
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e---~VvfWkWis--~-~~l~lVT-~taVyHWsi~~~s~P~-k 140 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---DVTFWKWIS--L-NTVALVT-DNAVYHWSMEGESQPV-K 140 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS---CCCEEEEEE--T-TEEEEEC-SSEEEEEESSSSCCCE-E
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC---CceEEEecC--C-CeEEEEc-CCeeEEecccCCCCch-h
Confidence 345677777776654 5789999999999988877654 366667765 4 5666555 4589999997632111 0
Q ss_pred eeeeecceeeEEEeeeeecc----ccccc------cCCCCcceeeccCCceeeecCCCCCC--ceeccCCC----ceEEE
Q 021291 103 SLTIKTNSYHFCKLSLVKEP----YANAK------QANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGP----KYMAV 166 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~ 166 (314)
++..+..-.....++....+ ..... ...+.+..+.. .+.....+.+|.. ..+-.+|+ .+++.
T Consensus 141 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~--er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 218 (494)
T 1bpo_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV--DRKVSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (494)
T ss_dssp EEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEES--TTCCEEEECCSEEEEEEEECTTCSSEEEEEEE
T ss_pred heecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeec--cccccchheeeeeeeEEEecCCCCCCceEEEE
Confidence 22222111111111111110 00000 01122222222 2233444555555 33333332 23332
Q ss_pred eec--CcCeEEEEecCCC---ce-----eeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEE
Q 021291 167 AGE--QLSEVEIWDLNTA---ER-----CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (314)
Q Consensus 167 ~g~--~d~~i~vwd~~~~---~~-----~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (314)
+.. ..+++.|-++... .. ...+. --++.......++. .++.. | .++.-+.-|.|++|
T Consensus 219 a~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~--------fppe~~~DFPvamq-vs~ky--g--viyviTK~G~i~ly 285 (494)
T 1bpo_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF--------FPPEAQNDFPVAMQ-ISEKH--D--VVFLITKYGYIHLY 285 (494)
T ss_dssp EECSTTCCEEEEEECSCCCTTCCCCCCEEEECC--------CCTTSTTCCEEEEE-EETTT--T--EEEEEETTSEEEEE
T ss_pred EEecCCCcEEEEEEcCCCccCCCCccceeeeee--------CCcccccCceeEEE-ecccC--C--EEEEEecCceEEEE
Confidence 211 1267888887432 11 11111 01122345666776 77652 3 67777888999999
Q ss_pred EccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeee
Q 021291 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
|+.+ +.++..-.-..++|..-+.+....-++.....|.|.--.++....+
T Consensus 286 DleT-gt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 286 DLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp ETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred eccc-ceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 9999 8888877777788877777655555666678888887777766544
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.96 E-value=1.8 Score=38.15 Aligned_cols=202 Identities=6% Similarity=-0.097 Sum_probs=107.7
Q ss_pred CceeEEEEccC-CCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCC-eEEEeecCCeEEEEeCCCC
Q 021291 19 ASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 19 ~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~ 96 (314)
..+.+++|.+. +.++++-...+.|+.++.+.......+...- .....+++.+ .+. +.++-+..+.|.+.++...
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~--~~p~GlAvD~--~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI--AHPDGIAVDW--VARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC--CCcCceEEec--ccCcEEEEeCCCCcEEEEeCCCC
Confidence 34678899884 5455555567889999877543332332221 2366888876 444 4445455778988888754
Q ss_pred CCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEE
Q 021291 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (314)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~v 176 (314)
.. . .+......... .+++.|....++.+--+..+.|..
T Consensus 425 ~~-~--~l~~~~l~~P~---------------------------------------~iavdp~~G~ly~tD~g~~~~I~r 462 (619)
T 3s94_A 425 MR-K--ILISEDLEEPR---------------------------------------AIVLDPMVGYMYWTDWGEIPKIER 462 (619)
T ss_dssp SC-E--EEECTTCCSEE---------------------------------------EEEEETTTTEEEEEECSSSCEEEE
T ss_pred eE-E--EEEECCCCCee---------------------------------------eEEEEcCCCcEEEecCCCCCEEEE
Confidence 21 1 11000000000 056777655555432222356776
Q ss_pred EecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEee-ecCCcce
Q 021291 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-KVHLEPV 255 (314)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~-~~h~~~v 255 (314)
.++.... ...+.. . .-.....++ +++++ ++ +.++-...+.|..++++. .....+ ...-...
T Consensus 463 ~~~dG~~-~~~l~~-------~----~l~~P~Gla-lD~~~--~~-LY~aD~~~~~I~~~~~dG--~~~~~~~~~~l~~P 524 (619)
T 3s94_A 463 AALDGSD-RVVLVN-------T----SLGWPNGLA-LDYDE--GK-IYWGDAKTDKIEVMNTDG--TGRRVLVEDKIPHI 524 (619)
T ss_dssp EETTSCS-CEEEEC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEESSS--CCCEEEEECCCCSS
T ss_pred EccCCCc-cEEEEe-------C----CCCCCeeeE-EcccC--CE-EEEEECCCCEEEEEecCC--CceEEEeccCCCCc
Confidence 6665322 222221 1 122455666 88752 33 555556667899999874 222222 2222233
Q ss_pred EEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 256 LCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
.+|+...+ ..+++-...+.|...+..++.
T Consensus 525 ~glav~~~-~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 525 FGFTLLGD-YVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp CCEEEETT-EEEEECTTSSCEEEEESSSCC
T ss_pred EEEEEECC-EEEEeecCCCeEEEEEcCCCc
Confidence 45666655 444555566778777777763
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.83 E-value=1.5 Score=36.55 Aligned_cols=223 Identities=11% Similarity=0.083 Sum_probs=119.8
Q ss_pred cCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEe
Q 021291 37 TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKL 116 (314)
Q Consensus 37 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 116 (314)
+.+.+|.|-|+.++..+.+-... --+.-.+| ..+.++.=. ..++.|+|+++....+ .+.+... .....+
T Consensus 45 ~~~~~vvIiDl~~~~~~~rrpi~-----AdsAIMnP--~~~iiALra-g~~lQiFnle~K~klk--s~~~~e~-VvfWkW 113 (494)
T 1bpo_A 45 GEQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNP--ASKVIALKA-GKTLQIFNIEMKSKMK--AHTMTDD-VTFWKW 113 (494)
T ss_dssp TTCCEEEEEETTSTTSCEEEECC-----CSEEEECS--SSSCEEEEE-TTEEEEEETTTTEEEE--EEECSSC-CCEEEE
T ss_pred CCCCeEEEEECCCCCcceecccc-----cceeeeCC--CCcEEEEec-CCeEEEEchHHhhhhc--ceecCCC-ceEEEe
Confidence 34448999998876544322211 12444677 656665544 6799999999876443 2222221 111111
Q ss_pred eeeeccccccccCCCCcceeeccCCceeeecCCCCCC--------ceeccCCCceEEEeec-----CcCeEEEEecCCCc
Q 021291 117 SLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--------DDVPAEGPKYMAVAGE-----QLSEVEIWDLNTAE 183 (314)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~-----~d~~i~vwd~~~~~ 183 (314)
-++.............|.+.....+...+..|.. ...+++.+-++++.-+ -.|.+.+|..+.+
T Consensus 114 ---is~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~- 189 (494)
T 1bpo_A 114 ---ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK- 189 (494)
T ss_dssp ---EETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-
T ss_pred ---cCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-
Confidence 1222333444555666666554444444444333 3345666555443211 2467889987643
Q ss_pred eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCC-ceEEEEeec---CCcEEEEEccCC--CCc-e--Eeee-----
Q 021291 184 RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG-FVNVLAGYE---DGSILVWDIRNP--GIP-L--TAMK----- 249 (314)
Q Consensus 184 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g-~~~l~~g~~---dg~i~vwd~~~~--~~~-~--~~~~----- 249 (314)
..+.+. ||.. ... .+..++... ..+++.+.. .+.++|.++..+ +.+ . ....
T Consensus 190 ~sQ~ie--------Ghaa----~F~---~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp 254 (494)
T 1bpo_A 190 VSQPIE--------GHAA----SFA---QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 254 (494)
T ss_dssp CEEEEC--------CSEE----EEE---EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT
T ss_pred ccchhe--------eeee----eeE---EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc
Confidence 334444 5521 111 132221111 113333333 278999998653 111 1 1111
Q ss_pred -cCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 250 -VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 250 -~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.-.+--.++..++....+..-..-|.|++||++++..++.
T Consensus 255 e~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 255 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 1233456677788777888888999999999999999986
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.72 E-value=1.2 Score=35.05 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=34.7
Q ss_pred CCCEEEEecC----C-----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-----CeEEEEeCC
Q 021291 29 TKPILFAGTT----G-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-----GTVKCWDIE 94 (314)
Q Consensus 29 ~~~~l~s~~~----d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~ 94 (314)
++.+++.|+. + ..+.+||..+.+....-........-..+.+ ++..++.|+.+ ..+.+||+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI----DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE----TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE----CCEEEEEcCCCCCcccccEEEECCC
Confidence 5666777775 2 3588899887654332111111111122222 44666666643 357778877
Q ss_pred CCC
Q 021291 95 NGG 97 (314)
Q Consensus 95 ~~~ 97 (314)
+.+
T Consensus 146 ~~~ 148 (308)
T 1zgk_A 146 RDE 148 (308)
T ss_dssp TTE
T ss_pred CCe
Confidence 654
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.63 E-value=2.2 Score=37.64 Aligned_cols=206 Identities=9% Similarity=-0.032 Sum_probs=113.3
Q ss_pred CceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEec----cCCcccEEEEEEcccCCCCeE-EEeecCCeEEEEe
Q 021291 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWV----HSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWD 92 (314)
Q Consensus 19 ~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd 92 (314)
..+.+++|.+... ++.+=...+.|+.++.+.......+.. ......+..|++.. .++.| ++-+..+.|.+.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~--~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDI--YSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeec--cCCeEEEEcCCCCEEEEEE
Confidence 4578899998544 445545577898888764332222322 01113478999987 65544 4656678888888
Q ss_pred CCCCCCCCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcC
Q 021291 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (314)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (314)
+... ... .+......... .+++.|....++.+-.....
T Consensus 418 ~~G~-~~~--~l~~~~l~~Pr---------------------------------------~iavdp~~g~ly~tD~g~~~ 455 (628)
T 4a0p_A 418 LDGR-SVG--VVLKGEQDRPR---------------------------------------AVVVNPEKGYMYFTNLQERS 455 (628)
T ss_dssp TTSC-EEE--EEEECTTCCEE---------------------------------------EEEEETTTTEEEEEEEETTE
T ss_pred CCCC-eEE--EEEeCCCCcee---------------------------------------eEEEecCCCeEEEeecCCCC
Confidence 8643 111 10000000000 05677755555554333222
Q ss_pred -eEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeee-c
Q 021291 173 -EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-V 250 (314)
Q Consensus 173 -~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-~ 250 (314)
.|...++. +.....+.. . .-.....++ +++.. ++ +.++-...+.|...|++ +.....+. .
T Consensus 456 ~~I~r~~~d-G~~~~~l~~-------~----~l~~P~gla-~D~~~--~~-LYw~D~~~~~I~~~~~d--G~~r~~~~~~ 517 (628)
T 4a0p_A 456 PKIERAALD-GTEREVLFF-------S----GLSKPIALA-LDSRL--GK-LFWADSDLRRIESSDLS--GANRIVLEDS 517 (628)
T ss_dssp EEEEEEETT-SCSCEEEEC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETT--SCSCEEEECS
T ss_pred CeEEEEeCC-CCCcEEEEe-------c----cCCCccEEE-EeCCC--CE-EEEEeCCCCEEEEEeCC--CCceEEEEcC
Confidence 56666665 332333321 0 122346666 87762 22 55555667889999986 33344443 3
Q ss_pred CCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeee
Q 021291 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYV 287 (314)
Q Consensus 251 h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~ 287 (314)
......+|+... +..+++=...+.|...|..+++..
T Consensus 518 ~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 518 NILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp SCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCC
T ss_pred CCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCc
Confidence 334567888876 455566666778888888766543
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.56 E-value=1.3 Score=34.81 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCCEEEEecCC----CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec----C-----CeEEEEeCCC
Q 021291 29 TKPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR----D-----GTVKCWDIEN 95 (314)
Q Consensus 29 ~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----d-----g~v~iwd~~~ 95 (314)
++.+++.|+.+ ..+.+||..+.+....-........- +++. - ++..++.|+. + ..+.+||+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-V--GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-E--TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-E--CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 56677777642 36889998877644321111110111 2222 2 4466667665 2 3577888776
Q ss_pred CC
Q 021291 96 GG 97 (314)
Q Consensus 96 ~~ 97 (314)
.+
T Consensus 100 ~~ 101 (308)
T 1zgk_A 100 NQ 101 (308)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.23 E-value=1.6 Score=34.44 Aligned_cols=67 Identities=13% Similarity=0.198 Sum_probs=34.6
Q ss_pred ccCCCEEEEecC----C-------CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC--------Ce
Q 021291 27 HQTKPILFAGTT----G-------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--------GT 87 (314)
Q Consensus 27 ~~~~~~l~s~~~----d-------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--------g~ 87 (314)
..++.+++.|+. + ..+.+||..+.+....-..... ..-.+++.. ++..++.|+.+ ..
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP-RCLFGLGEA---LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC-EESCEEEEE---TTEEEEECCEESSTTCCBCCC
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc-hhceeEEEE---CCEEEEEeCCcCCCCCcccce
Confidence 346777777773 1 1277889887764322111111 001122222 34666666642 35
Q ss_pred EEEEeCCCCC
Q 021291 88 VKCWDIENGG 97 (314)
Q Consensus 88 v~iwd~~~~~ 97 (314)
+.+||+.+.+
T Consensus 119 ~~~~d~~~~~ 128 (315)
T 4asc_A 119 VMCYDRLSFK 128 (315)
T ss_dssp EEEEETTTTE
T ss_pred EEEECCCCCc
Confidence 7788887654
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.23 E-value=1.8 Score=35.00 Aligned_cols=61 Identities=23% Similarity=0.336 Sum_probs=36.9
Q ss_pred ceEEecCCCCceeEEEEccCCC-EEEEecCCCeEEEEeCCCCeEEEEEec-----cCCcccEEEEEEcc
Q 021291 10 PVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWV-----HSAAHGIVSVATGP 72 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~ 72 (314)
.+..+-..-.....|+|.|+|+ +++ +...|.|++++.. ++....+.. .........|+++|
T Consensus 9 ~~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~p 75 (353)
T 2g8s_A 9 NVEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAP 75 (353)
T ss_dssp EEEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECT
T ss_pred EEEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECC
Confidence 3344433345678999999998 555 4567999999853 432211111 11123478999998
No 321
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.45 E-value=2.5 Score=34.10 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=22.0
Q ss_pred EEEEEEcccCCCCeEEEeecCCeEEEEeCC
Q 021291 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (314)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 94 (314)
...|+|.| +++.|+.+...|.|++++..
T Consensus 20 P~~i~~~p--dG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 20 PWALAFLP--DNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp EEEEEECS--TTCCEEEEETTTEEEEEETT
T ss_pred cEEEEEcC--CCCEEEEEeCCceEEEEeCC
Confidence 68999999 98735555678999999853
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.36 E-value=2.3 Score=33.31 Aligned_cols=62 Identities=8% Similarity=0.017 Sum_probs=33.9
Q ss_pred EEEEecC--CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC----CeEEEEeCCCCC
Q 021291 32 ILFAGTT--GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD----GTVKCWDIENGG 97 (314)
Q Consensus 32 ~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~ 97 (314)
+++.|+. ...+.+||..+.+....-........-..+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW----DNVVYILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE----TTEEEEECCBSSSBCCEEEEEETTTTE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE----CCEEEEEeCCCCCCcceEEEEeCCCCe
Confidence 4555654 35789999888764432111111111122222 44677777754 567888887764
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.19 E-value=3.4 Score=34.77 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=21.6
Q ss_pred EEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
.+.|+|.| +++++++-...+.|.+++..++
T Consensus 29 P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 29 PHALLWGP--DNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp EEEEEECT--TSCEEEEETTTCEEEEECTTTC
T ss_pred ceEEEEcC--CCcEEEEEcCCCEEEEEECCCC
Confidence 68999999 9876666443357888876544
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.06 E-value=3 Score=33.77 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=44.5
Q ss_pred eeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc--eEeeecCCcceEEEEEeC-CCCeEEEecCC-CcEEEEec
Q 021291 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP--LTAMKVHLEPVLCLSIDE-SCNGGISGGAD-QKIVLYNL 281 (314)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d-g~i~iw~~ 281 (314)
....++ |+|| ++.++++-+..+.|+.|+++..+.. ...+ ......-.+++++ +|.+.+++..+ +.|..|+.
T Consensus 222 ~pNGia-~spD---g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 222 FANGIN-ISPD---GKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp SEEEEE-ECTT---SSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred ccCcce-ECCC---CCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 456666 9998 5535666667889999998743332 1223 2245667899998 59877666444 23444443
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.88 E-value=2.8 Score=33.04 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=34.5
Q ss_pred ccCCCEEEEecC----CC-------eEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC-------CeE
Q 021291 27 HQTKPILFAGTT----GG-------ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-------GTV 88 (314)
Q Consensus 27 ~~~~~~l~s~~~----dg-------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-------g~v 88 (314)
..++.+++.|+. ++ .+.+||..+.+....-..... ..-.+++.. ++..++.|+.+ ..+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLFGLGEV---DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCSCEEEEE---TTEEEEEEEEBTTTCCEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-ccccceEEE---CCEEEEEcCccCCCCcccceE
Confidence 346777777773 12 277888877654432111111 111122222 34666777654 247
Q ss_pred EEEeCCCCC
Q 021291 89 KCWDIENGG 97 (314)
Q Consensus 89 ~iwd~~~~~ 97 (314)
.+||+.+.+
T Consensus 130 ~~yd~~~~~ 138 (318)
T 2woz_A 130 LCYDPVAAK 138 (318)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCC
Confidence 778887664
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.80 E-value=3.1 Score=33.38 Aligned_cols=56 Identities=13% Similarity=-0.037 Sum_probs=26.9
Q ss_pred cEEEEEccCCC-CceEeeecCCcceEEEEEeCCCCeEEEecCCC------cEEEEecCCCeeeEe
Q 021291 232 SILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQ------KIVLYNLDHSTYVLF 289 (314)
Q Consensus 232 ~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg------~i~iw~~~~~~~~~~ 289 (314)
.+.+||+.+.. ..+..+......-.+ ..-+++.++.|+.++ .|.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 57789987521 122222211111122 223556777777543 355568887776554
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.54 E-value=3.1 Score=32.72 Aligned_cols=62 Identities=10% Similarity=0.036 Sum_probs=33.4
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeec----C-------CeEEEEeCCCCCC
Q 021291 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR----D-------GTVKCWDIENGGL 98 (314)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----d-------g~v~iwd~~~~~~ 98 (314)
+++.|+ ..+.+||..+++... ................. ++..++.|+. + ..+..||..+.+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 445566 479999999887543 22211001122222233 5577777773 1 1267788877643
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.30 E-value=0.44 Score=38.30 Aligned_cols=109 Identities=11% Similarity=0.135 Sum_probs=64.3
Q ss_pred eecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCC-CCCceEEEEe-ecCCcEEEEEccCCCCc
Q 021291 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK-SQGFVNVLAG-YEDGSILVWDIRNPGIP 244 (314)
Q Consensus 167 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~-~~g~~~l~~g-~~dg~i~vwd~~~~~~~ 244 (314)
.++.||.|.-+|..+|+..-++... . ....... -.|.. .++. .++.. +.||.|+.++..+ +..
T Consensus 15 v~t~dG~l~Ald~~tG~~~W~~~~~-------~----~~p~~~~--~~~~~~~~~~-~~vv~p~~dG~l~a~~~~~-G~~ 79 (339)
T 2be1_A 15 AADVEGGLHAVDRRNGHIIWSIEPE-------N----FQPLIEI--QEPSRLETYE-TLIIEPFGDGNIYYFNAHQ-GLQ 79 (339)
T ss_dssp EEETTSCEEEEETTTTEEEEEECGG-------G----SCCSEEC--CCSCTTTSSE-EEEECCSTTTEEEEEETTT-EEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCC-------c----cCCcEEe--cCCccccCCc-EEEEEECCCCEEEEEECCC-CcE
Confidence 4667999999999999998887731 0 0111111 01111 1133 34443 6899999999876 533
Q ss_pred eEeeec----CCcceEE---EEE-e----CCCCeEEEecCCCcEEEEecCCCeeeEee
Q 021291 245 LTAMKV----HLEPVLC---LSI-D----ESCNGGISGGADQKIVLYNLDHSTYVLFG 290 (314)
Q Consensus 245 ~~~~~~----h~~~v~~---~~~-~----~~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 290 (314)
...+.. ...++.. ... + ..+..+++|+.+|.+.-.|+.+|+.++..
T Consensus 80 ~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 80 KLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred EeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 332221 1222221 000 0 03346889999999999999999998874
No 329
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.29 E-value=2.9 Score=38.93 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=33.4
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEe
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW 57 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 57 (314)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777888888899999999999999999999988764
No 330
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.08 E-value=9.4 Score=37.19 Aligned_cols=247 Identities=11% Similarity=0.088 Sum_probs=120.3
Q ss_pred EEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCe
Q 021291 24 VCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPS 103 (314)
Q Consensus 24 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 103 (314)
.-.+|..+.+|.=. ..++.|+|+++...+..+... ..|.-=.|-. + +.|+-.+ +..|.-|++.......+ +
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~---e~VvfWkWis--~-~~l~lVT-~~aVyHW~~~~~s~P~k-~ 141 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS--L-NTVALVT-DNAVYHWSMEGESQPVK-M 141 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccC---CCceEEEecC--C-CeeEEEc-CCeEEEeccCCCCccHH-H
Confidence 34566666666544 678999999988777766554 3466667765 3 5555544 45899999975321110 1
Q ss_pred eeeecceeeEEEe----eeeeccccccc------cCCCCcceeeccCCceeeecCCCCCC--ceecc----CCCceEEEe
Q 021291 104 LTIKTNSYHFCKL----SLVKEPYANAK------QANEPKDCYEREVGETVDTDSLCDSK--DDVPA----EGPKYMAVA 167 (314)
Q Consensus 104 ~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~ 167 (314)
+..+..-.....+ +.........+ ...+.+..+.++ +.....+.||.. ..+-. ....+++.+
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e--r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc--cccchhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 2111111111111 11111110000 111222222222 233334455544 22222 222333321
Q ss_pred e--cCcCeEEEEecCCC-ceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCc
Q 021291 168 G--EQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (314)
Q Consensus 168 g--~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (314)
- ...+.+.|-++... .....+... .+...--++.......++. .++. .| .+..-+.-|.|++||+.+ +.+
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk-~~~~~~~~~~~~Dfpv~~~-vs~k--~g--~iy~itk~G~~~~~d~~t-~~~ 292 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKK-AVDVFFPPEAQNDFPVAMQ-ISEK--HD--VVFLITKYGYIHLYDLET-GTC 292 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccc-cccccCCcccccCcceEEE-eccc--cC--EEEEEecCceEEEEeccc-chh
Confidence 1 11267888877432 110111100 0000000111233455555 6654 23 677777889999999998 777
Q ss_pred eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeE
Q 021291 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVL 288 (314)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~ 288 (314)
+..-.-..++|...+.+....-++.....|.|.--.++....+-
T Consensus 293 i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 293 IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred hhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhh
Confidence 76655555666655554333334555577777766666655443
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.99 E-value=2.3 Score=31.78 Aligned_cols=108 Identities=7% Similarity=-0.072 Sum_probs=55.8
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcE
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (314)
++|+|+|. +.++ .+|.++-.+..+.....-+...... +... ...-.++. |.|+ |. +.++ .||.|
T Consensus 46 laf~P~G~-LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~I---G~~G--w~~F~a~~-fD~~---G~-LYav--~dG~i 109 (236)
T 1tl2_A 46 LFLSPGGE-LYGV---LNDKIYKGTPPTHDNDNWMGRAKKI---GNGG--WNQFQFLF-FDPN---GY-LYAV--SKDKL 109 (236)
T ss_dssp EEECTTSC-EEEE---ETTEEEEESCCCSTTCCHHHHCEEE---ECSC--GGGCSEEE-ECTT---SC-EEEE--ETTEE
T ss_pred EEECCCcc-EEEE---eCCeEEEECCCCCCcccccccccEe---cccc--cccceEEE-ECCC---CC-EEEe--CCCEE
Confidence 78999875 5654 2577777776552221111100000 0000 11134555 8887 54 3333 66999
Q ss_pred EEEEccCCCCc--e---Eeeec-CCcceEEEEEeCCCCeEEEecCCCcEEEE
Q 021291 234 LVWDIRNPGIP--L---TAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLY 279 (314)
Q Consensus 234 ~vwd~~~~~~~--~---~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~iw 279 (314)
+-++-.+.+.- + ..+.. -=..+..|.|+|+|.+.+.. |+.++-+
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 88775331211 0 11110 11367899999999865555 7775443
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.48 E-value=5.7 Score=33.42 Aligned_cols=72 Identities=10% Similarity=0.091 Sum_probs=44.8
Q ss_pred ceEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEE--EEecc----CCcccEEEEEEcccCC---CCeEE
Q 021291 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS--SSWVH----SAAHGIVSVATGPSIG---LNKVI 80 (314)
Q Consensus 10 ~~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~----~~~~~v~~~~~~~~~~---~~~l~ 80 (314)
.+..+-.--...+.|+|.|+|+++++-...+.|++++..+++... .+... ........|+|+| + +..|+
T Consensus 18 ~~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P--df~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP--DFKNNPYIY 95 (454)
T ss_dssp CEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT--TTTTSCEEE
T ss_pred EEEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC--CcCcCCEEE
Confidence 344444344567899999999987775554578888865554322 22110 1224578999998 5 55555
Q ss_pred Eee
Q 021291 81 SQG 83 (314)
Q Consensus 81 s~~ 83 (314)
.+.
T Consensus 96 v~~ 98 (454)
T 1cru_A 96 ISG 98 (454)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.47 E-value=1 Score=38.76 Aligned_cols=109 Identities=10% Similarity=0.105 Sum_probs=65.5
Q ss_pred ceeccCCCceEEEeecCcCeEEEEecCCCceeee--e-cccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC
Q 021291 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR--L-HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (314)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~vwd~~~~~~~~~--~-~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (314)
+.++|||+++++ +|-.+.++.++|.+....... + ...... .+... ..-.....+ |.++ |. ...+-..|
T Consensus 328 v~vsPDGkyi~v-~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~--~ae~e-~GlGPlHt~-Fd~~---G~-aYTtlfid 398 (638)
T 3sbq_A 328 CNTSSDGKYFIA-AGKLSPTCSMIAIDKLPDLFAGKLADPRDVI--VGEPE-LGLGPLHTT-FDGR---GN-AYTTLFID 398 (638)
T ss_dssp EEECTTSCEEEE-ECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE--EECCB-CCSCEEEEE-ECSS---SE-EEEEETTT
T ss_pred eeeCCCCCEEEE-cCCCCCeEEEEEeehhhhhhhccccCcccce--Eeecc-CCCcccEEE-ECCC---Cc-eEeeeeec
Confidence 889999998776 677789999999874321000 0 000000 01111 122344454 9887 53 67777899
Q ss_pred CcEEEEEccCC---------CCceEeeecCCcceEEEEE-----eCCCCeEEEec
Q 021291 231 GSILVWDIRNP---------GIPLTAMKVHLEPVLCLSI-----DESCNGGISGG 271 (314)
Q Consensus 231 g~i~vwd~~~~---------~~~~~~~~~h~~~v~~~~~-----~~~~~~l~s~s 271 (314)
..|.-|++... ...+..+..|-.+-...+- .++|++|++..
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 99999998741 1355666666554433332 67888888874
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.44 E-value=4.7 Score=32.46 Aligned_cols=31 Identities=23% Similarity=0.299 Sum_probs=24.3
Q ss_pred cEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
..+.|+|.| ++.++++--..|.|++++..++
T Consensus 33 ~P~~ia~~p--dG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 33 SPWGLAPLP--GGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp SEEEEEECT--TSCEEEEETTTCEEEEECTTTC
T ss_pred CceEEEEcC--CCcEEEEEecCCEEEEEECCCC
Confidence 378999999 9887666555899999986654
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.55 E-value=9.2 Score=34.20 Aligned_cols=68 Identities=10% Similarity=0.086 Sum_probs=36.2
Q ss_pred cCCCEEEEecCC----CeEEEEeCCCCeEEEEE-e-----ccCCcccEEEEEEcccCCCCeEEEeecCC------eEEEE
Q 021291 28 QTKPILFAGTTG----GELRIWDTVQHRTVSSS-W-----VHSAAHGIVSVATGPSIGLNKVISQGRDG------TVKCW 91 (314)
Q Consensus 28 ~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~-~-----~~~~~~~v~~~~~~~~~~~~~l~s~~~dg------~v~iw 91 (314)
.++.+++.|+.+ ..+.+||..+++....- . .......-..+.+.. ++..++.|+.++ .+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~--~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR--NNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT--TTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc--CCEEEEEcCCCCCCCccccEEEE
Confidence 466777778753 36888888776544332 1 111111123333432 336666666532 46777
Q ss_pred eCCCCC
Q 021291 92 DIENGG 97 (314)
Q Consensus 92 d~~~~~ 97 (314)
|+.+.+
T Consensus 474 d~~t~~ 479 (695)
T 2zwa_A 474 DMKTRE 479 (695)
T ss_dssp ETTTTE
T ss_pred eCCCCc
Confidence 776653
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.32 E-value=7 Score=38.04 Aligned_cols=178 Identities=11% Similarity=0.073 Sum_probs=92.4
Q ss_pred CCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCCCCCCeeeeecceeeEEEee
Q 021291 38 TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117 (314)
Q Consensus 38 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (314)
...+|.|-|+.++..+.+-... --+.-.+| ..+.++.= ...++.|+|+++....+ .+.+... ....
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~-----AdsAIMnP--~~~iiALr-ag~~lQiFnl~~k~klk--s~~~~e~-VvfW--- 111 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNP--ASKVIALK-AGKTLQIFNIEMKSKMK--AHTMTDD-VTFW--- 111 (1630)
T ss_pred CCceEEEEECCCCCCccccccc-----chhhccCC--CcceEEEe-cCCeEEEeehHHhhhhc--ccccCCC-ceEE---
Confidence 3447888888876544221111 12334566 54555543 36799999999876554 2222221 1111
Q ss_pred eeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEecCCC-ceeeeecccccCCC
Q 021291 118 LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGS 196 (314)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd~~~~-~~~~~~~~~~~~~~ 196 (314)
.|-.+ +.+.+++ +..|+-|++... .+...|.
T Consensus 112 -------------------------------------kWis~-~~l~lVT---~~aVyHW~~~~~s~P~k~fd------- 143 (1630)
T 1xi4_A 112 -------------------------------------KWISL-NTVALVT---DNAVYHWSMEGESQPVKMFD------- 143 (1630)
T ss_pred -------------------------------------EecCC-CeeEEEc---CCeEEEeccCCCCccHHHHh-------
Confidence 12222 2344434 367999999742 3444444
Q ss_pred CCcCCCCCceeeeEEEecCCCCCCceEEEEee------cCCcEEEEEccCCCCceEeeecCCcceEEEEEe--CC-CCeE
Q 021291 197 PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID--ES-CNGG 267 (314)
Q Consensus 197 ~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~l 267 (314)
.|..-...-+.... -+++ .+-.+++|= -.|.+.+|+.. .+.-+.+.||...-..+... +. ...+
T Consensus 144 -R~~~L~~~QIinY~-~d~~---~kW~~l~gi~~~~~~v~G~mQLyS~e--r~~sQ~iegha~~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 144 -RHSSLAGCQIINYR-TDAK---QKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLF 216 (1630)
T ss_pred -cchhcccCeeEEee-eCCC---CCeEEEEeeccCCCcccceeeeeecc--cccchhhhHhHhhhheeccCCCCCCceEE
Confidence 34332233444433 4444 442333332 45889999988 45556677887655555442 11 1222
Q ss_pred EEecC---CCcEEEEecCCC
Q 021291 268 ISGGA---DQKIVLYNLDHS 284 (314)
Q Consensus 268 ~s~s~---dg~i~iw~~~~~ 284 (314)
+-+.. .++++|-++...
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred EEEEecCCCceEEEEecCCC
Confidence 21111 268888888653
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.74 E-value=8.2 Score=31.08 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=50.5
Q ss_pred eEEecCCCCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEE--EEe--ccCCcccEEEEEEcccCC---CCeEEEe-
Q 021291 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS--SSW--VHSAAHGIVSVATGPSIG---LNKVISQ- 82 (314)
Q Consensus 11 ~~~l~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~--~~~~~~~v~~~~~~~~~~---~~~l~s~- 82 (314)
+.++-.--..-+.|+|.|||+++++--..|.|++++..+++... .+. ..........|+++| + ...|+..
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~P--df~~~g~lYv~y 101 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSP--DYASDHMVYAYF 101 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECT--THHHHCEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecc--ccccCCEEEEEE
Confidence 33444445667899999999988877668999999866555322 111 012224589999998 5 2333332
Q ss_pred --ecCCeEEEEeCCC
Q 021291 83 --GRDGTVKCWDIEN 95 (314)
Q Consensus 83 --~~dg~v~iwd~~~ 95 (314)
..++.|.-|....
T Consensus 102 t~~~~~~v~R~~~~~ 116 (347)
T 3das_A 102 TSASDNRIVRMLYDE 116 (347)
T ss_dssp ECSSSEEEEEEEBCT
T ss_pred ecCCCCEEEEEEeCC
Confidence 2344555555544
No 338
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.87 E-value=9.4 Score=30.72 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=29.7
Q ss_pred CceEEEEeecCCcEEEEEccCCCCc-----eEeeecCCcceEEEEEeCCCCeEEEec
Q 021291 220 GFVNVLAGYEDGSILVWDIRNPGIP-----LTAMKVHLEPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s 271 (314)
|. ++++....+.|...++...+.. ...+-.-...+..+++.|+|.++++..
T Consensus 278 G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 278 GD-LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TE-EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CE-EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 44 5555556677877777642221 112212235788999999987665543
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.47 E-value=9 Score=30.07 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=31.3
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeccC-CcccEEEEEEcccCCCCeEEEeec----CC-------eEEEEeCCCCC
Q 021291 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR----DG-------TVKCWDIENGG 97 (314)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~----dg-------~v~iwd~~~~~ 97 (314)
+++.|+. .+.+||..+.+... ..... .+..-.+++ .. ++..++.|+. ++ .+.+||..+.+
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~-~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIV-TQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEE-CS--SSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEE-EE--CCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 4555554 38899998887544 22111 111122333 33 5577777773 11 16677776654
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.12 E-value=17 Score=32.79 Aligned_cols=71 Identities=10% Similarity=0.144 Sum_probs=44.8
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEecc--CCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCC
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH--SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 95 (314)
...|.++.-..+| +|-.|+.+| +..||-.+ ...+... .....|.++.... + ..|..++.+| +..||..+
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~--~-g~lWigT~~G-l~~yd~~~ 91 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYS---TQQHFTYGENNNTRIYCGVIID--N-TYLYMGTDNG-ILVYNYRA 91 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSC---EEECSCTTSTTSSCEEEEEEET--T-TEEEEEETTE-EEEEETTT
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCc---eEEEEccCCCCCceEEEEEEcC--C-CcEEEEeCCC-eEEEeCCC
Confidence 4679999988888 455577788 66777432 1122111 1124588887766 5 4566666655 78999876
Q ss_pred CC
Q 021291 96 GG 97 (314)
Q Consensus 96 ~~ 97 (314)
.+
T Consensus 92 ~~ 93 (758)
T 3ott_A 92 DR 93 (758)
T ss_dssp TE
T ss_pred CE
Confidence 53
No 341
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.96 E-value=10 Score=30.10 Aligned_cols=67 Identities=12% Similarity=0.011 Sum_probs=37.1
Q ss_pred CCceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEecc--CCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH--SAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 18 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
...+.++.|.+++..+++ +.+|.| +...+.++.-..+... .....+.+|.|.+ + . ++.++.++.|..
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~-~-~~~~g~~g~i~~ 103 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--N-E-GWIVGEPPIMLH 103 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--T-E-EEEEEETTEEEE
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--C-e-EEEEECCCeEEE
Confidence 457899999877777775 456755 3333434322221111 1113588999876 3 3 444556665544
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=85.23 E-value=3.2 Score=30.99 Aligned_cols=89 Identities=10% Similarity=-0.136 Sum_probs=51.5
Q ss_pred eeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcc--------eEEEEEeCCCCeEEEecCCCcEE
Q 021291 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP--------VLCLSIDESCNGGISGGADQKIV 277 (314)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~s~s~dg~i~ 277 (314)
....++ |+|+ |. +.++ .+|.++-.+..+ ... ..+-+.... -..+.|+++|.+.++ .||.|+
T Consensus 42 ~~~~la-f~P~---G~-LYaV--~~G~Ly~~~~~t-~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iy 110 (236)
T 1tl2_A 42 NFKFLF-LSPG---GE-LYGV--LNDKIYKGTPPT-HDN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLY 110 (236)
T ss_dssp TCSEEE-ECTT---SC-EEEE--ETTEEEEESCCC-STT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEE
T ss_pred cceeEE-ECCC---cc-EEEE--eCCeEEEECCCC-CCc-ccccccccEecccccccceEEEECCCCCEEEe--CCCEEE
Confidence 344676 9997 65 3444 677766666543 111 111111222 367889999987666 669888
Q ss_pred EEecCCCe---------ee-----EeeeeeeecCCCceecee
Q 021291 278 LYNLDHST---------YV-----LFGIGFVCDQEGNKFGTT 305 (314)
Q Consensus 278 iw~~~~~~---------~~-----~~~~~~~~~~~~~~~~~~ 305 (314)
-++-.+.. .+ ..+..+.++|+|.+++..
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 77753311 11 013455678888877654
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.44 E-value=17 Score=30.61 Aligned_cols=114 Identities=10% Similarity=0.020 Sum_probs=54.7
Q ss_pred ceeccCCC-ceEEEeecCcCeEEEEecCCCc---eeeeecccccCCCCCcCCCCCceeeeEEEecCCCCC-CceEEEEee
Q 021291 154 DDVPAEGP-KYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ-GFVNVLAGY 228 (314)
Q Consensus 154 ~~~~~~~~-~~~~~~g~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~-g~~~l~~g~ 228 (314)
++|.|+|. ++++ + ...|.|++++..... .+..+... ...+.......-.+.++ |+|+-.. +..|++-..
T Consensus 19 ~a~~pdG~~rl~V-~-er~G~i~~~~~~g~~~~~~~~~~~~~---~~~g~~~~~e~Gllgia-~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 19 ALHSGDGSQRLFI-L-EKEGYVKILTPEGEIFKEPYLDIHKL---VQSGIKGGDERGLLSLA-FHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EECCSSSSCCEEE-E-ETTTEEEEECTTSCBCSSCSEECTTT---BCCCCSSSCCCSEEEEE-ECTTHHHHCEEEEEEEE
T ss_pred EEECCCCCeEEEE-E-eCCceEEEEeCCCCeeeeeecCCcce---eccCccccCCCcceeeE-eCCCCcCCCEEEEEEeC
Confidence 67889986 5664 3 346999999754221 12222210 00010001123456787 9985211 332333222
Q ss_pred cC-----------CcEEEEEccCC---------CCceEeee--cCCcceEEEEEeCCCCeEEEecCC
Q 021291 229 ED-----------GSILVWDIRNP---------GIPLTAMK--VHLEPVLCLSIDESCNGGISGGAD 273 (314)
Q Consensus 229 ~d-----------g~i~vwd~~~~---------~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~d 273 (314)
.. ..|.-|.+... .+.+..+. ........|+|.|||.+.++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 13444555321 11222222 112346789999999877766543
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.23 E-value=15 Score=34.22 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=31.3
Q ss_pred ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.+.+++..++..++++-+.|+++|+|++.+++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 466777788888999999999999999999988765
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.80 E-value=8 Score=33.45 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=49.7
Q ss_pred ecCCCCCCceEEEEeecCCcEEEEEccCC-----CC------c-eEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEe
Q 021291 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNP-----GI------P-LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (314)
Q Consensus 213 ~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-----~~------~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~ 280 (314)
.+|| |++++++|-.+.++.++|++.. .+ . +.+.. -.-.....+|+++|....|--.|..|.-|+
T Consensus 330 vsPD---Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 330 TSSD---GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp ECTT---SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred eCCC---CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 7777 7767888888999999998731 11 1 22222 234567889999997667777899999999
Q ss_pred cCCC
Q 021291 281 LDHS 284 (314)
Q Consensus 281 ~~~~ 284 (314)
++..
T Consensus 406 i~~a 409 (638)
T 3sbq_A 406 MEEA 409 (638)
T ss_dssp HHHH
T ss_pred ccHH
Confidence 9764
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.87 E-value=27 Score=31.48 Aligned_cols=200 Identities=12% Similarity=0.129 Sum_probs=99.2
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCCCC
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 98 (314)
..|.++....+| .|..|+.+| +..||..+.+... . .......|.++.. . + ..|..++.+ -|..+|..+++.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~-~-~~~~~~~i~~i~~-~--~-g~lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ-P-ETDFPTDVRTMAL-Q--G-DTLWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC-C-SCCCCSCEEEEEE-E--T-TEEEEEETT-EEEEEETTTCCE
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC-c-ccCCCceEEEEEe-c--C-CcEEEEcCC-cceeEeCCCCeE
Confidence 468888777666 566666666 7899987764332 1 1111133777654 3 4 345556655 688888876542
Q ss_pred CCCCeeeeecceeeEEEeeeeeccccccccCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeecCcCeEEEEe
Q 021291 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWD 178 (314)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~vwd 178 (314)
. .......... ...+.. +....+|. +.+ |+. +-|..||
T Consensus 134 ~-----~~~~~~~~l~-----------------~~~i~~----------------i~~d~~g~-lWi--gt~-~Gl~~~~ 171 (758)
T 3ott_A 134 T-----SFDTRRNGLP-----------------NNTIYS----------------IIRTKDNQ-IYV--GTY-NGLCRYI 171 (758)
T ss_dssp E-----EECHHHHCCS-----------------CSCEEE----------------EEECTTCC-EEE--EET-TEEEEEE
T ss_pred E-----EeccCCCCcC-----------------CCeEEE----------------EEEcCCCC-EEE--EeC-CCHhhCc
Confidence 1 1100000000 000000 11223443 443 332 3488888
Q ss_pred cCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecCCcEEEEEccCCCCceEeeecCCcceEEE
Q 021291 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL 258 (314)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 258 (314)
..+++.. .+..+ .........+.++. ..++ +. .|..|+. +-+..+|..+ ++...........|.++
T Consensus 172 ~~~~~~~-~~~~~------~~~~~~~~~i~~i~-~d~~---~~-~lWigt~-~Gl~~~~~~~-~~~~~~~~l~~~~i~~i 237 (758)
T 3ott_A 172 PSNGKFE-GIPLP------VHSSQSNLFVNSLL-EDTT---RQ-CVWIGTE-GYLFQYFPST-GQIKQTEAFHNNSIKSL 237 (758)
T ss_dssp TTTTEEE-EECCC------CCTTCSSCCEEEEE-EETT---TT-EEEEEEE-EEEEEEETTT-TEEEEEEEEEEEEEEEE
T ss_pred cCCCceE-EecCC------CccccccceeEEEE-EECC---CC-EEEEEEC-CCCeEEcCCC-CeEEeccCCCCCeEEEE
Confidence 8765432 22210 01000122355554 4443 33 4455554 4578888775 43221111123468888
Q ss_pred EEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 259 SIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 259 ~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
..+.+|.+.+ |+.+ -+.+++..+++
T Consensus 238 ~~d~~g~lWi-gT~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 238 ALDGNGDLLA-GTDN-GLYVYHNDTTP 262 (758)
T ss_dssp EECTTCCEEE-EETT-EEEEECCTTSC
T ss_pred EEcCCCCEEE-EeCC-ceeEEecCCCc
Confidence 8888887544 4444 47788876543
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.59 E-value=1.7 Score=41.45 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=33.3
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEe
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW 57 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 57 (314)
..+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 355667777788899999999999999999999988764
No 348
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.25 E-value=18 Score=29.10 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=32.4
Q ss_pred CceEEEEeecCCcEEEEEccCCCCce--Eee-ecCCcceEEEEEeCCCCeEEEec
Q 021291 220 GFVNVLAGYEDGSILVWDIRNPGIPL--TAM-KVHLEPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~--~~~-~~h~~~v~~~~~~~~~~~l~s~s 271 (314)
|. ++++....+.|...++...+... ..+ .+-...+..+++.|+|.++++..
T Consensus 277 G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 277 GW-LLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TE-EEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred Cc-EEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 54 66666667788888887422322 122 22245788999999997666653
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.85 E-value=33 Score=30.63 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=38.3
Q ss_pred CCCEEEEecCC------CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC--eEEEEeCCCCC
Q 021291 29 TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGG 97 (314)
Q Consensus 29 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~ 97 (314)
++.+++.|+.+ ..+.+||..+.+....-..... ..-.+++... ++..++.|+.++ .+.+||+.+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~--~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLP--DGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECT--TSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEc--CCEEEEECCCCCCCCEEEEECCCCc
Confidence 66677777653 3578899887654332111111 1112333323 557788887654 68899988764
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.72 E-value=7.2 Score=37.19 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=30.0
Q ss_pred ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.+.+++..++..++++-+.|+++|||++.+++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 344556677888999999999999999999998775
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.31 E-value=4.4 Score=36.10 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.2
Q ss_pred CceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEec
Q 021291 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV 58 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 58 (314)
..|.++.+ +..+|++-+.|.++|+|++.+++++.....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34665555 467999999999999999999999887765
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.91 E-value=15 Score=32.14 Aligned_cols=58 Identities=5% Similarity=0.034 Sum_probs=41.5
Q ss_pred eEEEEccCCCEEEEecCC------------CeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEe
Q 021291 22 TDVCFHQTKPILFAGTTG------------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (314)
Q Consensus 22 ~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (314)
--|+|+|.|++++.-..+ ..+.+.+..+++..+-+..+.. ..++.++|+| |++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g-aE~TG~~fsp--Dg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-CEVTGISFSP--DQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT-CEEEEEEECT--TSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC-ccCcCeeECC--CCCEEEEE
Confidence 458899999866653321 3466677777887777776654 5699999999 88777654
No 353
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=73.77 E-value=9.7 Score=32.82 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=44.8
Q ss_pred CceeEEEEccC--CCEEEEecCCCeEEEEeCCCC----eEEEEEeccCCcccEE-EEEEcccCCCCeEEEeecCCeEEE
Q 021291 19 ASVTDVCFHQT--KPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIV-SVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 19 ~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
...++++.... ...++.|+.+|.|.-..+... ..+..+.......+|. .|.+++ +...|+.++.++.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~--~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI--NQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECT--TSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEcc--CCCeEEEEecccccee
Confidence 35777777653 346788999998765544322 2334444333224585 899999 8888998887765544
No 354
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=72.16 E-value=28 Score=30.90 Aligned_cols=81 Identities=11% Similarity=0.180 Sum_probs=49.4
Q ss_pred CCceEEecCCCCceeEEEEcc----CC--CEEEEecCCCeEE-EEeCCCC-------eEEEEEeccCCcccEEEEEEccc
Q 021291 8 PDPVAVLRGHRASVTDVCFHQ----TK--PILFAGTTGGELR-IWDTVQH-------RTVSSSWVHSAAHGIVSVATGPS 73 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~----~~--~~l~s~~~dg~v~-iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~ 73 (314)
.+|+....+.....+.|+.+. ++ ..++.|+.+|.|. +.....+ ..+..++......+|..|.+++
T Consensus 401 ~~Pll~~~~~~~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~- 479 (667)
T 4gz8_A 401 NRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST- 479 (667)
T ss_dssp GSCSEEECSSSCCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET-
T ss_pred CCceEEEcCcccceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC-
Confidence 344444444444456666542 34 3678899999875 3322211 1233444444446799999999
Q ss_pred CCCCeEEEeecCCeEEE
Q 021291 74 IGLNKVISQGRDGTVKC 90 (314)
Q Consensus 74 ~~~~~l~s~~~dg~v~i 90 (314)
+.+.|+.++.++.++|
T Consensus 480 -~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 480 -KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp -TTTEEEEEBSSCEEEE
T ss_pred -CCCEEEEEECCEEEEE
Confidence 8899999998876655
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.39 E-value=40 Score=27.48 Aligned_cols=119 Identities=7% Similarity=0.025 Sum_probs=61.2
Q ss_pred EEEeecCcCeEEEEecCCCceeeeecccccCCC------CCcCCCCCceeeeEEEecCCCCCCceEEEEeecCC-cEEEE
Q 021291 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS------PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SILVW 236 (314)
Q Consensus 164 ~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg-~i~vw 236 (314)
+.++-+..+.|.|+|+.+++..+.......... .|..-.....+..++ .+|+..+|...|.-....+ .++--
T Consensus 173 aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIa-Lsp~~~~~~~~LYf~plss~~ly~V 251 (381)
T 3q6k_A 173 VYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGIT-LGDRDSEGNRPAYYLAGSAIKVYSV 251 (381)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEE-ECCCCTTSCCEEEEEESSCSEEEEE
T ss_pred EEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEE-ecCCcCCCCeEEEEEECCCCcEEEE
Confidence 333444567899999998886655431100000 000000123466676 8887544322454444433 33333
Q ss_pred E---ccCC--CCceEeeecC--CcceEEEEEe-CCCCeEEEecCCCcEEEEecCC
Q 021291 237 D---IRNP--GIPLTAMKVH--LEPVLCLSID-ESCNGGISGGADQKIVLYNLDH 283 (314)
Q Consensus 237 d---~~~~--~~~~~~~~~h--~~~v~~~~~~-~~~~~l~s~s~dg~i~iw~~~~ 283 (314)
. +++. ...+..+..- ...-..++++ .+|.++++--....|..|+..+
T Consensus 252 ~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 252 NTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 2 1221 1122222211 1233456776 7888788888888999999876
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.30 E-value=44 Score=29.07 Aligned_cols=62 Identities=6% Similarity=0.026 Sum_probs=42.4
Q ss_pred CceeEEEEccCCCEEE-EecC-----------CCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEee
Q 021291 19 ASVTDVCFHQTKPILF-AGTT-----------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~-s~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (314)
.....|.|.++|.+.+ +=.. ...|..++..+++....+..... ..++.++|+| |++.|+.+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-aEpnGiafSP--D~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-CEVTGISFSP--DQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-CEEEEEEECT--TSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-ccccCCEECC--CCCEEEEEE
Confidence 3456799999998777 3211 22577777777877666654432 4589999999 888877654
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.42 E-value=45 Score=26.46 Aligned_cols=22 Identities=9% Similarity=-0.096 Sum_probs=15.3
Q ss_pred CCceEEEeecCcCeEEEEecCC
Q 021291 160 GPKYMAVAGEQLSEVEIWDLNT 181 (314)
Q Consensus 160 ~~~~~~~~g~~d~~i~vwd~~~ 181 (314)
+..++++.|.....+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTS
T ss_pred CCEEEEEeCcCCCeEEEEcccc
Confidence 3456666665556799999864
No 358
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=66.92 E-value=28 Score=29.62 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=48.3
Q ss_pred CCceEEecCCCCceeEEEEcc----CC--CEEEEecCCCeEEEEeCC-CCe-------EEEEEeccCCcccEEEEEEccc
Q 021291 8 PDPVAVLRGHRASVTDVCFHQ----TK--PILFAGTTGGELRIWDTV-QHR-------TVSSSWVHSAAHGIVSVATGPS 73 (314)
Q Consensus 8 ~~~~~~l~~h~~~v~~~~~~~----~~--~~l~s~~~dg~v~iwd~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~ 73 (314)
.+++....+-.-..++|+... ++ ..++.|+.+|.|.-.-+. .+. .+..+.......+|..|.+++
T Consensus 393 ~~Pll~~~~~~~~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~- 471 (495)
T 1q47_A 393 NRPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST- 471 (495)
T ss_dssp GSCSEEESSSSSCEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-
T ss_pred cccEEEecCCccceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-
Confidence 345444433222567777654 23 357789999977543332 211 223444332235699999999
Q ss_pred CCCCeEEEeecCCeEEE
Q 021291 74 IGLNKVISQGRDGTVKC 90 (314)
Q Consensus 74 ~~~~~l~s~~~dg~v~i 90 (314)
+...|+.++.++.++|
T Consensus 472 -~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 472 -KQQQLYIGSTAGVAQL 487 (495)
T ss_dssp -TTTEEEEEBSSCEEEE
T ss_pred -CCCEEEEEECCeEEEE
Confidence 8889999998876655
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.55 E-value=9.5 Score=34.01 Aligned_cols=34 Identities=12% Similarity=0.053 Sum_probs=27.4
Q ss_pred ceEEEEEeCCCCeEEEecCCCcEEEEecCCCeeeEe
Q 021291 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTYVLF 289 (314)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~~~~~ 289 (314)
.|.++.++ ..++++-+.|.++|+|++++++.+..
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 45555544 56899999999999999999987765
No 360
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=65.09 E-value=18 Score=31.05 Aligned_cols=81 Identities=15% Similarity=0.199 Sum_probs=49.0
Q ss_pred CCCCCceEEecCCCCceeEEEEcc-CC-CEEEEecCCCeEEEEeCC-C--CeEEEEEeccCCcccEE-EEEEcccCCCCe
Q 021291 5 PPPPDPVAVLRGHRASVTDVCFHQ-TK-PILFAGTTGGELRIWDTV-Q--HRTVSSSWVHSAAHGIV-SVATGPSIGLNK 78 (314)
Q Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~~~-~~-~~l~s~~~dg~v~iwd~~-~--~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~ 78 (314)
|...+|+....+ ...+.|+... ++ ..++.|+.+|.|.-.-+. . ...+..+... ...+|. .|.+++ +...
T Consensus 375 p~~~~Pll~~~~--~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~-~~~pi~~~l~l~~--~~~~ 449 (528)
T 3ol2_B 375 PLEATPILEWPG--IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQ-QGSAVSRDLTFDG--TFEH 449 (528)
T ss_dssp CEECCCSEEETT--CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESS-TTSCCCSCCEECT--TSSE
T ss_pred cccccceEEecC--CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccC-CCCcceeeEEEec--CCCE
Confidence 333444444433 3477777765 33 466789999988744433 2 1223344432 224574 899988 7788
Q ss_pred EEEeecCCeEEE
Q 021291 79 VISQGRDGTVKC 90 (314)
Q Consensus 79 l~s~~~dg~v~i 90 (314)
|+.++.++.++|
T Consensus 450 Lyv~s~~~V~~v 461 (528)
T 3ol2_B 450 LYVMTQSTLLKV 461 (528)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEeCCEEEEE
Confidence 888888876665
No 361
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=61.35 E-value=25 Score=31.27 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=43.9
Q ss_pred ceeEEEEcc--CCCEEEEecCCCeEEEEeCCC----CeEEEEEeccCCcccE-EEEEEcccCCCCeEEEeecCCeEEE
Q 021291 20 SVTDVCFHQ--TKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGI-VSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 20 ~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
..++++... +...++.|+.+|.|.-.-+.. ...+..+.......+| ..|.+++ +...|+.++.++.+++
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~--~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI--NQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECT--TSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcC--CCCEEEEEecCEEEEE
Confidence 456666655 334678899999887544432 2234444333222456 6899998 7788888888776665
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=57.95 E-value=1.1e+02 Score=27.57 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=34.4
Q ss_pred cCCcEEEEEccCCC------CceEe-ee-cCCcceEEEEEeCCCCeEEEecCCCc--EEEEecCCCe
Q 021291 229 EDGSILVWDIRNPG------IPLTA-MK-VHLEPVLCLSIDESCNGGISGGADQK--IVLYNLDHST 285 (314)
Q Consensus 229 ~dg~i~vwd~~~~~------~~~~~-~~-~h~~~v~~~~~~~~~~~l~s~s~dg~--i~iw~~~~~~ 285 (314)
..+.|.+.|+.++. ..... +. .....+..+.+..+ .++++...++. +.++++.+++
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 46789999987621 12233 22 22346778888876 35666666764 6677766553
No 363
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=55.24 E-value=66 Score=27.87 Aligned_cols=83 Identities=11% Similarity=0.081 Sum_probs=50.5
Q ss_pred CCCceEEecCCCCceeEEEEcc----C--CCEEEEecCCCeEE-EEeCCC-------CeEEEEEeccC---------Ccc
Q 021291 7 PPDPVAVLRGHRASVTDVCFHQ----T--KPILFAGTTGGELR-IWDTVQ-------HRTVSSSWVHS---------AAH 63 (314)
Q Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~----~--~~~l~s~~~dg~v~-iwd~~~-------~~~~~~~~~~~---------~~~ 63 (314)
..+|+..-.+..-..+.|+... + -..++.|+.+|.|. +..... ...+..++... ...
T Consensus 391 ~~~Pll~~~~~~y~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~ 470 (565)
T 3oky_B 391 INRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDK 470 (565)
T ss_dssp GGSCSEEECSSSSCEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCC
T ss_pred cceeEEEEcCCccceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCC
Confidence 3456555554444567888775 2 24678899999875 443221 11233333211 124
Q ss_pred cEEEEEEcccCCCCeEEEeecCCeEEEE
Q 021291 64 GIVSVATGPSIGLNKVISQGRDGTVKCW 91 (314)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw 91 (314)
+|..|.+++ +...|+.++.++.++|-
T Consensus 471 pI~~L~ls~--~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 471 RIMGMQLDR--ASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCEEEEEG--GGTEEEEECSSCEEEEE
T ss_pred ceEEEEEcC--CCCEEEEEecCeEEEee
Confidence 588999998 77889999888777663
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.54 E-value=81 Score=24.28 Aligned_cols=53 Identities=13% Similarity=0.277 Sum_probs=31.8
Q ss_pred cCCcEEEEEccCCCCceEeeecCCcceEEEEEeCCCCeEEEecCCCcEEEEecCCCe
Q 021291 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (314)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~iw~~~~~~ 285 (314)
.||.|+.|-....+++-.... -...|..|+.......+++ ||.|..|-.....
T Consensus 196 ~~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~~g 248 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTTVPTE-ALSGVSAIASGEWYSLALK---NGKVIAWGSSRTA 248 (282)
T ss_dssp ETTEEEEEECCTTSTTCCCGG-GGSSCCEEEECSSCEEEEE---TTEEEEESTTCCC
T ss_pred ECCeEEEEECCCCCCCCCCcc-cCCCceEEEcCCCEEEEEE---CCEEEEecCCCCc
Confidence 599999998765343321111 1245777776555443333 8999999665543
No 365
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=47.21 E-value=1e+02 Score=24.09 Aligned_cols=215 Identities=7% Similarity=0.016 Sum_probs=101.3
Q ss_pred ccCCCEEEEe--cCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecC--------------CeEEE
Q 021291 27 HQTKPILFAG--TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--------------GTVKC 90 (314)
Q Consensus 27 ~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--------------g~v~i 90 (314)
+.++..|+-. ..++.|...+.+... ...+... .+--+++ +++.|+-+... ..|+.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~------~~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND------TAMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE------EEEEEEE--CSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC------ceeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 3455555543 235667777754333 3333221 1234466 77887766543 36777
Q ss_pred EeCCCCCCCCCCeeeeecceeeEEEeeeeeccccccc-cCCCCcceeeccCCceeeecCCCCCCceeccCCCceEEEeec
Q 021291 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (314)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 169 (314)
.++...+.. .+..... ..+++......... .......++.+.....-...+..+...+++++++.++.+. .
T Consensus 93 i~~dg~~~~-----~l~~~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~-~ 164 (302)
T 3s25_A 93 IKRNGHGST-----VLDPDPC--IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNN-P 164 (302)
T ss_dssp EETTSCCCE-----EEECSCE--EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCCCCSEEETTEEEEEC-T
T ss_pred EeCCCCcce-----EeecCCc--cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCceEeeEECCEEEEEe-C
Confidence 777766421 1111111 13334333222222 1123333443332211111111111256788998877643 3
Q ss_pred CcCeEEEEecCCCceeeeecccccCCCCCcCCCCCceeeeEEEecCCCCCCceEEEEeecC-CcEEEEEccCCCCceEee
Q 021291 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAM 248 (314)
Q Consensus 170 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~ 248 (314)
....|.+-++..+.....+. + ... .. +.|+ +..+..+...+ ..|..-+++. .....+
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~--------~-------~~~-~~-~~P~---g~~iy~t~~~~~~~I~~~~ldG--~~~~~L 222 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYD--------C-------NCY-KP-VVLD---DTNVYYMDVNRDNAIVHVNINN--PNPVVL 222 (302)
T ss_dssp TTCCEEEEETTTTEEEEEEC--------S-------CEE-EE-EEEE---TTEEEEEEGGGTTEEEEECSSS--CCCEEC
T ss_pred CCceEEEEECCCCCEEEEeC--------C-------Ccc-ce-eeec---CCEEEEEEcCCCcEEEEEECCC--CCeEEE
Confidence 45788888887665433332 1 111 12 5576 44233343332 3566666663 333444
Q ss_pred ecCCcceEEEEEeCCCCeEEEe--cCCCcEEEEecCCC
Q 021291 249 KVHLEPVLCLSIDESCNGGISG--GADQKIVLYNLDHS 284 (314)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~l~s~--s~dg~i~iw~~~~~ 284 (314)
.. ..+. .|+|++.+|.-+ +..+.|..-+++..
T Consensus 223 t~--~~~~--~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 223 TE--ANIE--HYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp SC--SCEE--EEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred eC--CCcc--eEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 32 2332 366677676543 23456666666643
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=42.48 E-value=97 Score=26.35 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=37.7
Q ss_pred EEEEeecCCcEEEEEccCCC-------CceEeeec--CCcceEEEEEeCCCCeEEEecCCCcEEE
Q 021291 223 NVLAGYEDGSILVWDIRNPG-------IPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVL 278 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~-------~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~dg~i~i 278 (314)
.+..|+.+|.|+=.-+.... ..+.++.. ...+|..|.++++..+|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 67888999987544332111 13334442 3578999999999999999988876655
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.98 E-value=1.3e+02 Score=26.28 Aligned_cols=61 Identities=15% Similarity=0.001 Sum_probs=37.7
Q ss_pred eeeeEEEecCCCCCCceEEEEeec-----------CCcEEEEEccCCCCceEeeecC-CcceEEEEEeCCCCeEEEec
Q 021291 206 MCMAVQAYLPSKSQGFVNVLAGYE-----------DGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISGG 271 (314)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~-----------dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s 271 (314)
..-.+. |.++ |.++|.+-.. ...|..++..+ ++....+.+. ...++.++|+||++.|+..-
T Consensus 477 sPDnL~-fd~~---G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLG-FDKA---GRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEE-ECTT---CCEEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceE-ECCC---CCEEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345565 8887 6644444321 22566666655 5555555443 35789999999999886653
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.41 E-value=1.1e+02 Score=26.74 Aligned_cols=38 Identities=18% Similarity=-0.014 Sum_probs=26.3
Q ss_pred cEEEEEccCCCCceEeeecC-CcceEEEEEeCCCCeEEEe
Q 021291 232 SILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISG 270 (314)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 270 (314)
.+.+.+..+ ++....+.++ ...++.++|+||++.|+..
T Consensus 510 ~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 355555555 5655555554 3579999999999888665
No 369
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.95 E-value=1.5e+02 Score=24.23 Aligned_cols=80 Identities=11% Similarity=0.094 Sum_probs=50.6
Q ss_pred CceeEEEEccCCCEEE--EecC-------------CCeEEEEeCCCC--eEEEEEeccC----CcccEEEEEEc-ccCC-
Q 021291 19 ASVTDVCFHQTKPILF--AGTT-------------GGELRIWDTVQH--RTVSSSWVHS----AAHGIVSVATG-PSIG- 75 (314)
Q Consensus 19 ~~v~~~~~~~~~~~l~--s~~~-------------dg~v~iwd~~~~--~~~~~~~~~~----~~~~v~~~~~~-~~~~- 75 (314)
-.|..+...+++++-+ +|-. --.|.+||+.++ +.++++.... ....+..+.+. ...+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577777777665433 2311 126889999999 9988886532 12457888887 2101
Q ss_pred ---CCeEEEee-cCCeEEEEeCCCCCC
Q 021291 76 ---LNKVISQG-RDGTVKCWDIENGGL 98 (314)
Q Consensus 76 ---~~~l~s~~-~dg~v~iwd~~~~~~ 98 (314)
..+.+.+. ..+-|.++|+.+++.
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~s 193 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDS 193 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcE
Confidence 23444333 467899999998864
No 370
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=34.67 E-value=1.4e+02 Score=26.15 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=43.3
Q ss_pred ceeEEEEc----cCC---CEEEEecCCCeEEEEeC-CCC-----eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCC
Q 021291 20 SVTDVCFH----QTK---PILFAGTTGGELRIWDT-VQH-----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (314)
Q Consensus 20 ~v~~~~~~----~~~---~~l~s~~~dg~v~iwd~-~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (314)
..+.++.. .++ ..++.|+.+|.|.-.-+ ..+ -.+..+.......+|..|.+++ +...|+.++.++
T Consensus 363 ~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~--~~~~LyV~s~~~ 440 (590)
T 3nvq_A 363 HYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDA--ERRKLYVSSQWE 440 (590)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEET--TTTEEEEECSSE
T ss_pred cEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcC--CCCEEEEEecce
Confidence 45666654 244 46788999998764332 222 1223343322335699999998 778899888887
Q ss_pred eEEEE
Q 021291 87 TVKCW 91 (314)
Q Consensus 87 ~v~iw 91 (314)
.++|-
T Consensus 441 V~qVP 445 (590)
T 3nvq_A 441 VSQVP 445 (590)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 66653
No 371
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=34.43 E-value=1.2e+02 Score=26.92 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=36.9
Q ss_pred EEEEeecCCcEEEE-EccCCCCceEeee--cCCcceEEEEEeCCC--CeEEEecCCCcEEE
Q 021291 223 NVLAGYEDGSILVW-DIRNPGIPLTAMK--VHLEPVLCLSIDESC--NGGISGGADQKIVL 278 (314)
Q Consensus 223 ~l~~g~~dg~i~vw-d~~~~~~~~~~~~--~h~~~v~~~~~~~~~--~~l~s~s~dg~i~i 278 (314)
.++.|+.+|.|+=. ........+.++. ....+|..|.++++. .+|..++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67888889987433 4433122233332 235689999998887 88888888876665
No 372
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.95 E-value=1.8e+02 Score=25.83 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=36.7
Q ss_pred EEEEeecCCcEE-EEEccCCC-C-----ceEeee--cCCcceEEEEEeCCCCeEEEecCCCcEEE
Q 021291 223 NVLAGYEDGSIL-VWDIRNPG-I-----PLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVL 278 (314)
Q Consensus 223 ~l~~g~~dg~i~-vwd~~~~~-~-----~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~i 278 (314)
.+..|+.+|.|+ +....... . .+.++. ....+|..|.++++...|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 677888999875 33222101 1 223333 34568999999999999999988876665
No 373
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=26.36 E-value=2.2e+02 Score=21.79 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=38.3
Q ss_pred ceeEEEEccCCCEEEEecCCCeEEEEeCCCCeEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEEEeCCCC
Q 021291 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (314)
Q Consensus 20 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 96 (314)
.|..++..... .++. . ||.|..|-....-.+..-.... ..|..++... . ..++. . ||.|..|-....
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~--~~i~~ia~G~--~-hs~~l-~-~G~v~~wG~n~~ 91 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQ--SGVDAIAAGN--Y-HSLAL-K-DGEVIAWGGNED 91 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGG--SCCCEEEECS--S-EEEEE-E-TTEEEEEECCTT
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCC--CCEEEEEeCC--C-EEEEE-E-CCEEEEeeCCCC
Confidence 57777765433 3333 4 8999999765422111100111 3477887765 3 33333 4 899999987654
No 374
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=26.13 E-value=2.5e+02 Score=24.57 Aligned_cols=56 Identities=7% Similarity=-0.021 Sum_probs=37.2
Q ss_pred EEEEeecCCcEEEEEccCCCC---c--eEeee--cCCcceEEEEEeCCCCeEEEecCCCcEEE
Q 021291 223 NVLAGYEDGSILVWDIRNPGI---P--LTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVL 278 (314)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~---~--~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~i 278 (314)
.+..|+.+|.|+-.-...... . +.++. ....+|..|.++++...|..++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 678899999876443322121 1 22232 24568999999998888988888876665
No 375
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=24.26 E-value=3.2e+02 Score=22.92 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=33.6
Q ss_pred CceeEEEEccCCC-EEEEecCCCeEEEEeCCCCe---EEEEEec--c-----CCcccEEEEEEcc
Q 021291 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHR---TVSSSWV--H-----SAAHGIVSVATGP 72 (314)
Q Consensus 19 ~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~---~~~~~~~--~-----~~~~~v~~~~~~~ 72 (314)
..-+.|+|.|||. .|+.+...|.|++++..... .+..+.. . ........|+|+|
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P 78 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP 78 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC
Confidence 4557899999985 45555778999999754221 2222210 0 0124578999998
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.22 E-value=1.5e+02 Score=25.60 Aligned_cols=57 Identities=12% Similarity=0.043 Sum_probs=38.2
Q ss_pred eEEEEeecCCcEEEEEccCCCC---ceEeee--cCCcceE-EEEEeCCCCeEEEecCCCcEEE
Q 021291 222 VNVLAGYEDGSILVWDIRNPGI---PLTAMK--VHLEPVL-CLSIDESCNGGISGGADQKIVL 278 (314)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~~---~~~~~~--~h~~~v~-~~~~~~~~~~l~s~s~dg~i~i 278 (314)
..+..|+.+|.|+-..+..... .+.++. ....+|. .|.++++..+|..++.++.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3678889999876655543121 233333 2246785 8999999999999888776655
No 377
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=20.25 E-value=93 Score=26.65 Aligned_cols=70 Identities=13% Similarity=0.114 Sum_probs=37.7
Q ss_pred CCceeEEEEccCC--CEEEEecCCCeEEEEeCCC-C---eEEEEEeccCCcccEEEEEEcccCCCCeEEEeecCCeEEE
Q 021291 18 RASVTDVCFHQTK--PILFAGTTGGELRIWDTVQ-H---RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (314)
Q Consensus 18 ~~~v~~~~~~~~~--~~l~s~~~dg~v~iwd~~~-~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 90 (314)
.-.+++|+..+.+ ..++.|+.||.|.-.-+.. + ..+..+.......+|.. .... +++.|+.++.++.++|
T Consensus 404 ~~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~~-~l~~--~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 404 PVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQR-DVSR--LGDHLLFASGDQVFQV 479 (527)
T ss_dssp TCCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBCS-CCEE--ETTEEEEEETTEEEEE
T ss_pred ceEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceeeh-hccc--CCCEEEEEECCEEEEE
Confidence 3457888887743 3678899999876543322 1 12222322222233532 2233 3467777777765554
Done!