BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021295
(314 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 213/317 (67%), Positives = 244/317 (76%), Gaps = 23/317 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKT QPRGFGF+TYADPSVVDKVIEDTHIINGKQVEIKRTIP+GAVGSKDFKTKKIF
Sbjct: 77 MKDRKTAQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPRGAVGSKDFKTKKIF 136
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPS+V EDEF+DFF ++G+V+++QIMRDHST+RSRGFGFITFD+E AVDDLL+ GNK
Sbjct: 137 VGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNK 196
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
++ AG QVE+KKAEPKKPN P PS +RYN+ + +Y SG+G+AY G G
Sbjct: 197 IDFAGTQVEIKKAEPKKPNPPTPSSKRYNDSRSSYSSGYGEAYD------------GFGG 244
Query: 181 GGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-F 239
G GGYRSS AY R G YGGY G EFGGYGGY G MG YRG+P SLG++GRYGG F
Sbjct: 245 SYGAAGGYRSSAAYAGRSGAYGGY--GSEFGGYGGYAGAMGPYRGDP-SLGFAGRYGGSF 301
Query: 240 NRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPS--GYDIGLGSSYGGSSGGAFFGSR 297
+RGYD+ G YGG +ESYG YG GGG G GYD L YGG+SGG+F+GSR
Sbjct: 302 SRGYDLGG-YGGASESYGAYGAGAAAGGGSSAAGAYQGGYDASLAGGYGGASGGSFYGSR 360
Query: 298 GGYGGAGGSSRYHPYGR 314
GGYG RYHPYGR
Sbjct: 361 GGYGAG----RYHPYGR 373
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T++ RGFGFIT+ VD ++
Sbjct: 46 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIED 105
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 106 THIIN--GKQVEIKRTIPR 122
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 204/262 (77%), Gaps = 20/262 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYAD SVVD+VI+DTH+INGKQVEIKRTIPKGA+G+KDFKTKKIF
Sbjct: 2060 MKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIF 2119
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP++V E+EFKDFF Q+G+V++HQIMRDHSTSRSRGFGF+TFDTEQAVDDLL++GNK
Sbjct: 2120 VGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNK 2179
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
LELAGAQVE+KKAEPKKPN P P RRY++ +P +G GFGDAY G G
Sbjct: 2180 LELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRPGFGGGFGDAYA------------GFGG 2227
Query: 181 GGGGGGGYRSSGAYGVRGGGYG-------GYGVGGEFGGYGGYGGGMGAYRGEPSSLGYS 233
G G YRS GAYG R Y G G GG G GGG+G YRGEP SLGYS
Sbjct: 2228 SSFGNGPYRSGGAYGSRASAYAGYGGSEFGGYGGYGGGGSSGGGGGIGTYRGEPPSLGYS 2287
Query: 234 GRYGG-FNRGYDVTGDYGGLNE 254
GRYGG FNRGYD+ G +GG +E
Sbjct: 2288 GRYGGSFNRGYDLGGSHGGPSE 2309
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 40 IKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
++RTI + +++ + +KIF+GG+ +F F ++G++ + IM+D T + RG
Sbjct: 2011 VRRTIHETPYYTREGRRRKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRG 2070
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
FGF+T+ VD ++ + + G QVE+K+ PK
Sbjct: 2071 FGFVTYADLSVVDQVIQDTHVIN--GKQVEIKRTIPK 2105
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 201/322 (62%), Positives = 230/322 (71%), Gaps = 25/322 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTG PRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG+ S+DFKTKKIF
Sbjct: 1953 MKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIF 2012
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+SV+EDEF+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+
Sbjct: 2013 VGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNR 2072
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
LE+AG+QVE+KKAEPKK N P +R+++ +P+Y +GDAY G G
Sbjct: 2073 LEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY-------------GEFG 2119
Query: 181 GGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-F 239
GGG GG +R+ G YG RGGGYGGYG G GGMGAYR +P S+GYS RYG F
Sbjct: 2120 GGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDP-SMGYSARYGASF 2178
Query: 240 NRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGG-------SSGGA 292
+RGYD G YGG +ESYG Y G GGY G YD+G+G+ Y S G
Sbjct: 2179 SRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAG---SYDMGMGTGYAAGGRGSFYGSRGG 2235
Query: 293 FFGSRGGYGGAGGSSRYHPYGR 314
G G+ S RYHPYGR
Sbjct: 2236 GGGGGYDGAGSAPSGRYHPYGR 2257
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P +F F +G++ + IM+D T RGFGF+T+ VD ++
Sbjct: 1922 KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED 1981
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 1982 THIIN--GKQVEIKRTIPK 1998
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 200/318 (62%), Positives = 230/318 (72%), Gaps = 23/318 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS--KDFKTKK 58
MKDRKTGQPRGFGF+TYADPSVVD VIEDTHIINGKQVEIKRTIP+GA GS KDF+TKK
Sbjct: 76 MKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPRGAAGSNSKDFRTKK 135
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDEF+DFF ++G+V++HQIMRDHST+RSRGFGFIT+D+E+AVDDLL+ G
Sbjct: 136 IFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVG 195
Query: 119 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG 178
NK+E AGAQVE+KKAEPKKPN P PS +RYN+ + +YG G G G+ G
Sbjct: 196 NKIEFAGAQVEIKKAEPKKPNPPAPSSKRYNDSRSSYGGG-------------YGDGYDG 242
Query: 179 SGGGGGGGGYRSSGAYGVRG--GGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 236
GG G GGYRS GAYG RG G YGG+ G EFGGYGGY MG YRG+PS
Sbjct: 243 FGGNFGMGGYRSGGAYGGRGSAGAYGGF--GSEFGGYGGYASAMGPYRGDPSLGYAGRYG 300
Query: 237 GGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGS 296
GG+ RG G S G GVGGG S YD LG YGG +GG+F+G+
Sbjct: 301 GGYGRG---YDLGGYGGPSDGYGAYGGVGGGSSGSAYGSSYDASLGGGYGGPAGGSFYGT 357
Query: 297 RGGYGGAGGSSRYHPYGR 314
RGGY GA G+ RYHPYGR
Sbjct: 358 RGGYAGA-GTGRYHPYGR 374
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T + RGFGFIT+ VD ++
Sbjct: 45 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 104
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 105 THIIN--GKQVEIKRTIPR 121
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 291 bits (744), Expect = 4e-76, Method: Composition-based stats.
Identities = 134/163 (82%), Positives = 151/163 (92%), Gaps = 4/163 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYADPSVVD+VI+D+H+INGKQVEIKRTIPKGA+G++DFKTKKIF
Sbjct: 1959 MKDRKTGQPRGFGFVTYADPSVVDQVIQDSHVINGKQVEIKRTIPKGAIGARDFKTKKIF 2018
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP++V E EFK+FFMQ+G+V EHQIMRDHST+RSRGFGFITFDTEQAVDDLLAKGNK
Sbjct: 2019 VGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNK 2078
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAY 163
LELAG QVE+KKAEPKKPN P PS +RYN+ +P GFGDAY
Sbjct: 2079 LELAGGQVEIKKAEPKKPNPPLPSSKRYNDSRP----GFGDAY 2117
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 40 IKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
++RTI + ++ + +KIF+GG+ +F F ++G++ + IM+D T + RG
Sbjct: 1910 VRRTIDETPFYKREARRRKIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRG 1969
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
FGF+T+ VD ++ + + G QVE+K+ PK
Sbjct: 1970 FGFVTYADPSVVDQVIQDSHVIN--GKQVEIKRTIPK 2004
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 281 bits (720), Expect = 2e-73, Method: Composition-based stats.
Identities = 189/316 (59%), Positives = 222/316 (70%), Gaps = 21/316 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGF+TYADPSVVDKVIED HIINGKQVEIKRTIP+GAVGSKDF+TKKIF
Sbjct: 2008 MKDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRTKKIF 2067
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPS+V EDEF+DFF ++G+V++HQIMRDHST+RSRGFGFITFD+E+AVDDLL+ GNK
Sbjct: 2068 VGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNK 2127
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
++ AG+QVE+KKAEPKKP+ PS +R+N+ G+GD Y G+GG GGG+
Sbjct: 2128 IDFAGSQVEIKKAEPKKPSSAPPSSKRHNDSRSSYSSGGYGDTYDGFGGSFGMGGGYRSG 2187
Query: 180 GGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG- 238
G GGG G G G GYGGY GE G YRG+ SLGY+GRYGG
Sbjct: 2188 GAYGGGRGGAYGGFGSEFG-GYGGY--AGEMG----------PYRGD-LSLGYAGRYGGN 2233
Query: 239 FNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGSRG 298
F+RGYD+ G YGG +E+YG YG G GGG G G S G + SR
Sbjct: 2234 FSRGYDL-GGYGGPSENYGAYGAGGGSSGGGGAYQSGYDGNLGGGYGGASGGPFYGSSRA 2292
Query: 299 GYGGAGGSSRYHPYGR 314
GY + RYHPYGR
Sbjct: 2293 GY----SAGRYHPYGR 2304
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ KIF+GG+ +F F ++G++ + IM+D T + RGFGFIT+ VD +
Sbjct: 1974 QNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKV 2033
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
+ + + G QVE+K+ P+
Sbjct: 2034 IEDPHIIN--GKQVEIKRTIPR 2053
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/230 (70%), Positives = 186/230 (80%), Gaps = 17/230 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--SKDFKTKK 58
MKDRKTGQPRGFGF+TYADPSVVD VIEDTHIINGKQVEIKRTIP+GAVG SKDF+TKK
Sbjct: 74 MKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPRGAVGSNSKDFRTKK 133
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDEF+DFF ++G+V++HQIMRDHST+RSRGFGFIT+D+E+AVDDLL+ G
Sbjct: 134 IFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVG 193
Query: 119 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG 178
NK+E AGAQVE+KKAEPKKPN P PS +RYN+ + +YG G G + G
Sbjct: 194 NKIEFAGAQVEIKKAEPKKPNPPAPSSKRYNDSRSSYGGG-------------YGDAYDG 240
Query: 179 SGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GG G GGYRS GAYG RG YGG+ G EFGGYGGY G MG YRG+PS
Sbjct: 241 FGGNFGMGGYRSGGAYGGRGSAYGGF--GSEFGGYGGYAGAMGPYRGDPS 288
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T + RGFGFIT+ VD ++
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 103 THIIN--GKQVEIKRTIPR 119
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 166/202 (82%), Gaps = 12/202 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYAD SVVD+VI+DTH+INGKQVEIKRTIPKGA+G+KDFKTKKIF
Sbjct: 73 MKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIF 132
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP++V E+EFKDFF Q+G+V++HQIMRDHSTSRSRGFGF+TFDTEQAVDDLL++GNK
Sbjct: 133 VGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNK 192
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
LELAGAQVE+KKAEPKKPN P P RRY++ +P +G GFGDAY G G
Sbjct: 193 LELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRPGFGGGFGDAYA------------GFGG 240
Query: 181 GGGGGGGYRSSGAYGVRGGGYG 202
G G YRS GAYG R Y
Sbjct: 241 SSFGNGPYRSGGAYGSRASAYA 262
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 42 KIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQD 101
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 102 THVIN--GKQVEIKRTIPK 118
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 203/257 (78%), Gaps = 16/257 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGF+TYADPSVVDKVIE+ H+INGKQVEIKRTIP+GAVGSKDF+TKKIF
Sbjct: 74 MKDRKTGQPRGFGFITYADPSVVDKVIEEPHVINGKQVEIKRTIPRGAVGSKDFRTKKIF 133
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPS+V EDEF+DFF ++G+V++HQIMRDHST+RSRGFGFITF++E+AVDDLL+ GNK
Sbjct: 134 VGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNK 193
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
++ AGAQVE+KKAEPKKPN PS +RYN+ G+GDAY G+GG GGG+
Sbjct: 194 IDFAGAQVEIKKAEPKKPNSAPPSSKRYNDSRSSYSSGGYGDAYDGFGGSFGMGGGYRSG 253
Query: 180 GGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG- 238
G GGG G + G + EFGGYGGY G MG YRG+P SLGY+GRYGG
Sbjct: 254 GAYGGGRGSGAYGGH------------ASEFGGYGGYAGAMGPYRGDP-SLGYAGRYGGS 300
Query: 239 FNRGYDVTGDYGGLNES 255
F+RGYD+ G YGG +E+
Sbjct: 301 FSRGYDLGG-YGGPSEN 316
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T + RGFGFIT+ VD ++ +
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE 102
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 103 PHVIN--GKQVEIKRTIPR 119
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/245 (69%), Positives = 194/245 (79%), Gaps = 15/245 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTG PRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG+ S+DFKTKKIF
Sbjct: 38 MKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIF 97
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+SV+EDEF+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+
Sbjct: 98 VGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNR 157
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
LE+AG+QVE+KKAEPKK N P +R+++ +P+Y +GDAY G G
Sbjct: 158 LEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY-------------GEFG 204
Query: 181 GGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-F 239
GGG GG +R+ G YG RGGGYGGYG G GGMGAYR +P S+GYS RYG F
Sbjct: 205 GGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDP-SMGYSARYGASF 263
Query: 240 NRGYD 244
+RGYD
Sbjct: 264 SRGYD 268
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+KIFVGG+P +F F +G++ + IM+D T RGFGF+T+ VD ++
Sbjct: 5 CRKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI 64
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 65 EDTHIIN--GKQVEIKRTIPK 83
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/239 (58%), Positives = 172/239 (71%), Gaps = 17/239 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR T +PRGFGF+T+ADP+VVD+VIED H+INGK VEIKRTIPKGA KDFKTKKIF
Sbjct: 46 MKDRYTQKPRGFGFITFADPAVVDRVIEDEHVINGKLVEIKRTIPKGAAPLKDFKTKKIF 105
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGN 119
VGG+PS++ EDEFK+FF +FG V EH+I+RDH+T+RSRGFGFI FD E+ VDDLLA KGN
Sbjct: 106 VGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGN 165
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
++L G+QVE+KKAEPKKP+ QP + P+ G + D+Y G+G GG F
Sbjct: 166 MIDLNGSQVEIKKAEPKKPS-NQPPRSLDSEPR---GRPYADSYDGFGSSYNYGGSF--- 218
Query: 180 GGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFG-GYGGYGGGMGAYRGEPSSLGYSGRYG 237
G YRS G++G R GGY G++G GY YGG + YRGEPS YS RYG
Sbjct: 219 ------GPYRSPGSFGARPGGYNSASGPGDYGSGYATYGGALVGYRGEPSL--YSSRYG 269
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + FK+ F ++GD+ + IM+D T + RGFGFITF VD ++
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIE- 73
Query: 118 GNKLELAGAQVEVKKAEPK 136
++ + G VE+K+ PK
Sbjct: 74 -DEHVINGKLVEIKRTIPK 91
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/238 (57%), Positives = 166/238 (69%), Gaps = 18/238 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR T +PRGFGF+T+ADP+VVD+VIED H+INGK VEIKRTIPKGA KDFKTKKIF
Sbjct: 46 MKDRYTQKPRGFGFITFADPTVVDRVIEDEHVINGKPVEIKRTIPKGAAPLKDFKTKKIF 105
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGN 119
VGG+PS++ EDEFK+FF +FG V EH+I+RDH+T+RSRGFGFI FD E+AVDDLL KGN
Sbjct: 106 VGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGN 165
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
++L G+QVE+KKAEPKKP+ QP + P+ G + D+Y G+G GG F
Sbjct: 166 MIDLNGSQVEIKKAEPKKPS-NQPPRSLDSEPR---GRPYADSYDGFGSSYNYGGSF--- 218
Query: 180 GGGGGGGGYRSSGAYGVRGGGY-GGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 236
G YRS ++G R Y YG G GY YGG + YR EPS YS RY
Sbjct: 219 ------GPYRSPRSFGARPSSYSSAYGPGDYGSGYATYGGALVGYR-EPSL--YSSRY 267
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + FK+ F ++GD+ + IM+D T + RGFGFITF VD ++
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVIE- 73
Query: 118 GNKLELAGAQVEVKKAEPK 136
++ + G VE+K+ PK
Sbjct: 74 -DEHVINGKPVEIKRTIPK 91
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/147 (77%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYAD SVVDKVI+D HII GKQVEIKRTIP+G++ S DFKTKKIF
Sbjct: 74 MKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIF 133
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPSSV++DEFK+FFMQFG+++EHQIMRDHST RSRGFGF+T+++E VD LLAKGN+
Sbjct: 134 VGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNR 193
Query: 121 LELAGAQVEVKKAEPKKPN-LPQPSYR 146
+EL+G QVE+KKAEPKKPN + PS R
Sbjct: 194 IELSGTQVEIKKAEPKKPNSVTTPSKR 220
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ EF F ++G++ + IM+D T + RGFGF+T+ VD ++ +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI-Q 101
Query: 118 GNKLELAGAQVEVKKAEPK 136
N + + G QVE+K+ P+
Sbjct: 102 DNHI-IIGKQVEIKRTIPR 119
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/147 (76%), Positives = 133/147 (90%), Gaps = 1/147 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYAD SVVDKVI+D HII GKQVEIKRTIP+G++ S DFKTKKIF
Sbjct: 74 MKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIF 133
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+SV++DEFK+FFMQFG+++EHQIMRDHST RSRGFGF+T+++E VD LLAKGN+
Sbjct: 134 VGGIPASVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNR 193
Query: 121 LELAGAQVEVKKAEPKKPN-LPQPSYR 146
+EL+G QVE+KKAEPKKPN + PS R
Sbjct: 194 IELSGTQVEIKKAEPKKPNSVTTPSKR 220
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ EF F ++G++ + IM+D T + RGFGF+T+ VD ++ +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI-Q 101
Query: 118 GNKLELAGAQVEVKKAEPK 136
N + + G QVE+K+ P+
Sbjct: 102 DNHI-IIGKQVEIKRTIPR 119
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/128 (87%), Positives = 121/128 (94%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDRKTGQPRGFGFVTYADPSVVD+VI+DTHIINGKQVEIKRTIPKG VGSKDF+T+KIF
Sbjct: 40 MKDRKTGQPRGFGFVTYADPSVVDQVIQDTHIINGKQVEIKRTIPKGVVGSKDFRTRKIF 99
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+ V EDEF +FF QFG+V EHQIMRDHST+RSRGFGFITFDTEQAVDDLLA+GNK
Sbjct: 100 VGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLARGNK 159
Query: 121 LELAGAQV 128
LELAG QV
Sbjct: 160 LELAGTQV 167
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 9 KIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQD 68
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 69 THIIN--GKQVEIKRTIPK 85
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 154/216 (71%), Gaps = 11/216 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV--GSKDFKTKK 58
MKDR T QPRGFGF+TY+DP+VVDKVIED H+INGKQVEIKRTIPKG+V SKDFKTKK
Sbjct: 57 MKDRHTSQPRGFGFITYSDPAVVDKVIEDNHVINGKQVEIKRTIPKGSVQSSSKDFKTKK 116
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGG+PS++ EDEFK FF ++G V +HQIM DH T RSRGFGFI F +EQ VDDLLA G
Sbjct: 117 IFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANG 176
Query: 119 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD--AYGGYGGGGFAGGGF 176
N ++LAG++VE+KKAEPKK + P N + AY SG D + YGG A G +
Sbjct: 177 NMVDLAGSKVEIKKAEPKKSSNAPPPPVHVRNARSAYDSGSRDHPSADNYGGMASAYGNY 236
Query: 177 GGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGG 212
GGG G YRS +G R YGG G+FGG
Sbjct: 237 ----RGGGFGPYRSDTGFGARLSSYGGV---GDFGG 265
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P + F F Q+G++ + IM+D TS+ RGFGFIT+ VD ++
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 86 NHVIN--GKQVEIKRTIPK 102
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/322 (51%), Positives = 204/322 (63%), Gaps = 25/322 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS--KDFKTKK 58
MK++ T QPRGFGF+TYADP+VVD V+ED+H+INGKQVEIKRTIPK ++ S +DFKTKK
Sbjct: 54 MKNKHTSQPRGFGFITYADPAVVDHVMEDSHVINGKQVEIKRTIPKDSMQSNPRDFKTKK 113
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGG+PS++ ED+FKDFF ++G V +HQIMRDH T RSRGFGF+ F +EQ VDDLLA G
Sbjct: 114 IFVGGLPSTLTEDDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANG 173
Query: 119 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG 178
N ++LAG++VE+KKAEPKK + P PS ++ + AY D G GG AGG
Sbjct: 174 NMIDLAGSKVEIKKAEPKKSSNPPPS--GGSDSRSAYSRDSRDRPSGNDHGGLAGG--YN 229
Query: 179 SGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG 238
S GGG G YR+ GA+G G G GVG G YG Y G+G Y G SS GY R+
Sbjct: 230 SFNGGGFGPYRNLGAFG--GSLGGHGGVGDYHGRYGRYYAGLGGYEGM-SSFGYPSRFAP 286
Query: 239 FNRGYDVTGDYGGLNESYGGY-------GGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGG 291
+ G+D G Y G N + GY G G G YD LG GS+
Sbjct: 287 YGGGFD--GPYAGGN--FSGYRRGGDESFGGPGSSSFGGGMYGGPYDPALGGYGPGSTPD 342
Query: 292 AFFGSRGGYGGAGGSSRYHPYG 313
+RG +GGA G RYHPYG
Sbjct: 343 M---NRGSFGGASG--RYHPYG 359
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P F+ F Q+G++ + IM++ TS+ RGFGFIT+ VD ++
Sbjct: 23 KIFVGGLPRDTTPAVFQKHFGQYGEIIDSVIMKNKHTSQPRGFGFITYADPAVVDHVMED 82
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 83 SHVIN--GKQVEIKRTIPK 99
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/158 (70%), Positives = 134/158 (84%), Gaps = 8/158 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGF+TYADPSVVD+VIEDTH+INGKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+PS+V EDEFK+FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++++KGN
Sbjct: 111 VGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 158
+++AG QVE+KKAEPKK + P P+ PAYGS
Sbjct: 171 IDMAGTQVEIKKAEPKKASNPPPA--------PAYGSN 200
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++GD+ + IM+D T + RGFGFIT+ VD ++
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/243 (56%), Positives = 166/243 (68%), Gaps = 26/243 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+PRGFGF+TY DPSVVD VI + HIIN KQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 47 MKDRHTGRPRGFGFITYEDPSVVDTVIAENHIINDKQVEIKRTIPKGSAESKDFKTKKIF 106
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+++ EDEFK+FF +FG V E++I+RDH + RSRGFGFI FD EQ VD+LLA+GN+
Sbjct: 107 VGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNR 166
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS-----GFGDAYGGYGG--GGFAG 173
++ G QVE+KKAEPKKP+ P + PAYGS G+GD+YGG+G GF
Sbjct: 167 TDMMGTQVEIKKAEPKKPSNPASA--------PAYGSDSRGRGYGDSYGGFGNSYSGFGS 218
Query: 174 GGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYS 233
G FG + YRS +G R G YG G G G YRG+P SLGYS
Sbjct: 219 GSFGPA-------SYRS---FGARFGEYGYGGGEFGGRYGDFGGSDFGGYRGDP-SLGYS 267
Query: 234 GRY 236
R+
Sbjct: 268 SRF 270
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ ++F +F ++G++ + IM+D T R RGFGFIT++ VD ++A+
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + QVE+K+ PK
Sbjct: 76 NHIIN--DKQVEIKRTIPK 92
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/158 (70%), Positives = 134/158 (84%), Gaps = 8/158 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGF+TYADPSVVD+VIEDTH+INGKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+PS+V EDEFK+FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++++KGN
Sbjct: 111 VGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 158
+++AG QVE+KKAEPKK + P P+ PAYGS
Sbjct: 171 IDMAGTQVEIKKAEPKKASNPPPA--------PAYGSN 200
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++GD+ + IM+D T + RGFGFIT+ VD ++
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 174/239 (72%), Gaps = 19/239 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR T +PRGFGF+T+ADP+VVD+VIED H+INGK+VEIKRTIPKGA KDFKTKKIF
Sbjct: 47 MKDRFTQKPRGFGFITFADPAVVDRVIEDNHVINGKEVEIKRTIPKGAAPLKDFKTKKIF 106
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGN 119
VGG+PS++ EDEFK+FF +FG V EH+I+RDHST+RSRGFGF+ FD E+ VD+LLA KGN
Sbjct: 107 VGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGN 166
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGG 178
++L G+QVE+KKAEPKKP+ P +R +++ P+ G D Y G G GG F
Sbjct: 167 MIDLNGSQVEIKKAEPKKPS--NPPHRSFDSEPR---GRPHADGYDGLGNSYNYGGSF-- 219
Query: 179 SGGGGGGGGYRSSGAYGVRGGGY-GGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 236
G YRS G++G R GGY YG G GYG YGG +G YRGE SSL YS R+
Sbjct: 220 -------GPYRSPGSFGTRPGGYSSSYGPGDYGSGYGAYGGALGGYRGE-SSL-YSSRF 269
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+P FK++F ++G++ + IM+D T + RGFGFITF + AV D + +
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITF-ADPAVVDRVIE 74
Query: 118 GNKLELAGAQVEVKKAEPK 136
N + + G +VE+K+ PK
Sbjct: 75 DNHV-INGKEVEIKRTIPK 92
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/326 (53%), Positives = 205/326 (62%), Gaps = 40/326 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGFVTYADPSVVD VIEDTH+INGKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+PS+V EDEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN
Sbjct: 111 VGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD---AYGGYGGGGFAGGGFG 177
+++AG QVE+KKAEPKK + P + S FG A G G G +G
Sbjct: 171 IDMAGTQVEIKKAEPKKAS------------NPPHVSAFGSNSRARSFSDGFGGFGSSYG 218
Query: 178 GSGGGGGGGGYRSS---GAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSG 234
G G YR++ G+ GGYG G G +G YRG+P SLGYS
Sbjct: 219 SYDSGFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGGYRGDP-SLGYSS 277
Query: 235 RYG------GFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGS 288
R+G + G G YG ESYG YGGSG SGYD G G+SYGG+
Sbjct: 278 RFGPYGGGFSGSYGGSGLGGYGQGGESYGNYGGSGYA---------SGYDSGAGASYGGA 328
Query: 289 SGGAFFGSRGGYGGAGGSSRYHPYGR 314
G G GG GSSRYHPY R
Sbjct: 329 GGLY------GRGGYSGSSRYHPYAR 348
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 132/158 (83%), Gaps = 8/158 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGF+TYADPSVVDKVIEDTH+I+GKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPSSV EDEFK FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++L+ GN
Sbjct: 111 VGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 158
+++AG QVE+KKAEPKK + P P+ P+YGS
Sbjct: 171 IDMAGTQVEIKKAEPKKASNPPPA--------PSYGSN 200
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IM+D T + RGFGFIT+ VD ++
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIH--GKQVEIKRTIPK 96
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 143/247 (57%), Positives = 173/247 (70%), Gaps = 18/247 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGFVTYADPSV+DKVI+D HI++GK VEIKRTIP+G SK KTKK+F
Sbjct: 74 MKDRLTGQPRGFGFVTYADPSVIDKVIQDKHILDGKTVEIKRTIPRGN-SSKAPKTKKVF 132
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+S+ EDEFKD+F +FG V EHQIM+D +T RSRGFGFITF+TEQAV++++++G
Sbjct: 133 VGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRM 192
Query: 121 LELAGAQVEVKKAEPKKPNLPQ--PSYRRYNNPK--PAYGSGFGDAYGGYGGGGFAGGGF 176
LEL G QVE+KKAEPKKP LP P Y + P P GFGD+Y G+GG G+
Sbjct: 193 LELGGKQVEIKKAEPKKP-LPDAGPIYGVDSRPPYIPGGVGGFGDSYNGFGGAGY----- 246
Query: 177 GGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 236
G YRS+G YG R GG+ GYG GYGGY GG E +S GY GR
Sbjct: 247 -------GSNPYRSAGGYGDRPGGFAGYGGPDYGRGYGGYSGGSLGSYTEDASRGYGGRA 299
Query: 237 GGFNRGY 243
G ++ G+
Sbjct: 300 GSYSEGF 306
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ S F F ++G++ + IM+D T + RGFGF+T+ +D ++
Sbjct: 43 KIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQ- 101
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K L G VE+K+ P+
Sbjct: 102 -DKHILDGKTVEIKRTIPR 119
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 127/141 (90%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGFVTYADPSVVD VIEDTH+INGKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+PS+V EDEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN
Sbjct: 111 VGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLP 141
+++AG QVE+KKAEPKK + P
Sbjct: 171 IDMAGTQVEIKKAEPKKASNP 191
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 137/174 (78%), Gaps = 13/174 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+PRGFGF+TY DPSVVD VI + HIIN KQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 47 MKDRHTGRPRGFGFITYEDPSVVDTVIAEYHIINDKQVEIKRTIPKGSAESKDFKTKKIF 106
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+++ EDEFK+FF +FG V E++I+RDH + RSRGFGFI FD EQ VD+LLA+GN+
Sbjct: 107 VGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNR 166
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS-----GFGDAYGGYGGG 169
+++ G QVE+KKAEPKKP+ P + PAYGS G+GD+YGG+G
Sbjct: 167 IDMMGTQVEIKKAEPKKPSNPASA--------PAYGSDSRGRGYGDSYGGFGNS 212
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ ++F +F ++G++ + IM+D T R RGFGFIT++ VD ++A+
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + QVE+K+ PK
Sbjct: 76 YHIIN--DKQVEIKRTIPK 92
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/329 (50%), Positives = 204/329 (62%), Gaps = 36/329 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T QPRGFGF+TY++P+VVD+V++D H NGKQVEIKRTIPK +V SKDFKTKKIF
Sbjct: 55 MRDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIF 114
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P ++ ED+FK FF ++G V +HQIMRDH T RSRGFGFI F ++Q VDDLLA GN
Sbjct: 115 VGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNM 174
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
++LAGA+VE+KKAEPKK + P PS ++GS AYG G +G +GG
Sbjct: 175 IDLAGAKVEIKKAEPKKSSNPPPS---------SHGSASRSAYGRDSRGHSSGNDYGGLA 225
Query: 181 GG------GGGGGYRSSGAYGVRGGGYGGYGVGGEFG-GYGGYGGGMGAYRGEPSSLGYS 233
GG G YR+ G YG GG GYG GE+G YG Y G+G G S GY+
Sbjct: 226 NAYSNYNSGGFGPYRNHGVYG--GGSLSGYGGIGEYGVQYGRYYPGLGG-SGSMPSFGYA 282
Query: 234 GRYGGFNRGYDVTGDYGGLNESYGGYGGS--------GVGGGGGYGGGPSGYDIGLGSSY 285
R G + G+D G Y G N S GG GG YGG + YD LG
Sbjct: 283 SRVGPYGGGFD--GPYAGGNLSGYRRGGDESFGGLSSSSFGGAMYGG--AAYDPALG--- 335
Query: 286 GGSSGGAFFGSRGGYGGAGGSSRYHPYGR 314
G +SG SRG AGGS RY+PYGR
Sbjct: 336 GYASGSTPERSRGNL--AGGSGRYNPYGR 362
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P E +F F Q+G++ + IMRD TS+ RGFGFIT+ VD ++
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVM-- 81
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ E G QVE+K+ PK
Sbjct: 82 DDIHEFNGKQVEIKRTIPK 100
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 172/327 (52%), Positives = 204/327 (62%), Gaps = 32/327 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--SKDFKTKK 58
M+DR TGQPRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKGA G SKD KTKK
Sbjct: 51 MRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKK 110
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDE KDFF ++G+V EHQ++RDH T+RSRGFGF+ FD+E+ VD+LL+KG
Sbjct: 111 IFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKG 170
Query: 119 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS-----GFGDAYGGYGGGGFAG 173
N +++A QVE+KKAEPKK N P+YGS D+Y YG
Sbjct: 171 NMIDMADTQVEIKKAEPKK---------SLNRSPPSYGSHPRGRSSNDSYASYG----GP 217
Query: 174 GGFGGSGGGGGGGGYRSSG---AYGVRGGGYGGYGVGGEF--GGYGGYGGGMGAYRGEPS 228
G G G G RS G + G GYG VG EF G GG +G YR EP
Sbjct: 218 YGGFDGGYGHPPGPIRSHGGPASRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEP- 276
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGS 288
LGYS R+G + G+ G G +Y GY G G GGYGG G+ G
Sbjct: 277 PLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGGGEGYGGYGGP-----GYGGAYESGG 331
Query: 289 SGGAFFGSRGGYG-GAGGSSRYHPYGR 314
GG++ G+ G YG G SSRYHPY R
Sbjct: 332 PGGSYEGAGGPYGRGYSSSSRYHPYAR 358
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IMRD T + RGFGFITF VD ++
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 205/338 (60%), Gaps = 52/338 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGFVTYADPSVVD VIEDTH+INGKQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 36 MKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIF 95
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+PS+V EDEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN
Sbjct: 96 VGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNM 155
Query: 121 LELAGAQ------------VEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD---AYGG 165
+++AG Q VE+KKAEPKK + P + S FG A
Sbjct: 156 IDMAGTQVSILQWSPRNKHVEIKKAEPKKAS------------NPPHVSAFGSNSRARSF 203
Query: 166 YGGGGFAGGGFGGSGGGGGGGGYRSS---GAYGVRGGGYGGYGVGGEFGGYGGYGGGMGA 222
G G G +G G G YR++ G+ GGYG G G +G
Sbjct: 204 SDGFGGFGSSYGSYDSGFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGG 263
Query: 223 YRGEPSSLGYSGRYG------GFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSG 276
YRG+P SLGYS R+G + G G YG ESYG YGGSG SG
Sbjct: 264 YRGDP-SLGYSSRFGPYGGGFSGSYGGSGLGGYGQGGESYGNYGGSGYA---------SG 313
Query: 277 YDIGLGSSYGGSSGGAFFGSRGGYGGAGGSSRYHPYGR 314
YD G G+SYGG+ G G GG GSSRYHPY R
Sbjct: 314 YDSGAGASYGGAGGLY------GRGGYSGSSRYHPYAR 345
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 5 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 64
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 65 THVIN--GKQVEIKRTIPK 81
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 145/194 (74%), Gaps = 11/194 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+PRGFGF+TY+DP+VVD VI +THIIN KQVEIKRTIPKG+ SKDFKTKKIF
Sbjct: 47 MKDRHTGRPRGFGFITYSDPTVVDTVIAETHIINDKQVEIKRTIPKGSAESKDFKTKKIF 106
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+S+NEDEFK FF ++G V + +I+RDH + RSRGFGFI FD E VD++L++GN
Sbjct: 107 VGGIPTSMNEDEFKGFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSEGNM 166
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG--GGFAGGGFGG 178
+++ G QVE+KKAEPKKP+ P S Y + + G G+ D+YGG+G F GGFG
Sbjct: 167 IDMLGTQVEIKKAEPKKPSNPASSGHGYGS--ESRGRGYSDSYGGFGNSYSSFGSGGFGP 224
Query: 179 SGGGGGGGGYRSSG 192
+ YRSSG
Sbjct: 225 A-------SYRSSG 231
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ ++F +F ++G++ + IM+D T R RGFGFIT+ VD ++A+
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAE 75
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + QVE+K+ PK
Sbjct: 76 THIIN--DKQVEIKRTIPK 92
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 143/203 (70%), Gaps = 15/203 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR T +PRGFGF+T++DP++VD+VIED H+I+GKQVEIKRTIPKGA KDFKTKKIF
Sbjct: 46 MKDRYTQKPRGFGFITFSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIF 105
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGN 119
VGG+ S++ +DEFKDFF +FG V EH+I+RDHST++SRGFGFI FD E+ VD+LLA KGN
Sbjct: 106 VGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLAKKGN 165
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
++L G QVE+KKAEPKKP+ P S+ N P+ D Y G+
Sbjct: 166 MIDLDGTQVEIKKAEPKKPSNPPHSFD--NKPR---SRPHADGYDGFN---------SSY 211
Query: 180 GGGGGGGGYRSSGAYGVRGGGYG 202
GG YRS G++G R Y
Sbjct: 212 SYGGSLAPYRSPGSFGARPSSYA 234
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + FK++F ++G++ + IM+D T + RGFGFITF VD ++
Sbjct: 15 KIFIGGLSKETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIED 74
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G QVE+K+ PK
Sbjct: 75 NHVID--GKQVEIKRTIPK 91
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/247 (53%), Positives = 165/247 (66%), Gaps = 14/247 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS--KDFKTKK 58
MK+++T QPRGFGF+TY+DP+VVDKV+EDTH+INGKQVEIKRTIPK + S KDF+TKK
Sbjct: 55 MKNKQTSQPRGFGFITYSDPAVVDKVMEDTHVINGKQVEIKRTIPKDYMKSNPKDFRTKK 114
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGG+P + ED+FKDFF ++G V EHQIMRDH T RSRGFGF+ F++E+ VDDLLA G
Sbjct: 115 IFVGGLPPILTEDDFKDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDDLLANG 174
Query: 119 NKLELAGAQVEVKKAEPKK-PNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
N ++LAG++VE+KKAEPKK NLP + ++ + AYG D G GG A
Sbjct: 175 NMIDLAGSKVEIKKAEPKKSSNLPTST---GSDSRSAYGRDCRDRPSGDDRGGLADA--Y 229
Query: 178 GSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYG 237
S GG G YR+ G + GG Y YG Y +G Y G SS GY R+G
Sbjct: 230 SSYNSGGFGPYRNHGGFVGGYGGVRDY-----HERYGHYYPELGGYEGM-SSFGYPSRFG 283
Query: 238 GFNRGYD 244
+ G D
Sbjct: 284 PYGGGLD 290
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P F+ F +G + + IM++ TS+ RGFGFIT+ VD ++
Sbjct: 24 KIFVGGLPRDTTLATFQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVMED 83
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 84 THVIN--GKQVEIKRTIPK 100
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 135/182 (74%), Gaps = 20/182 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG PRGFGFVTYADPSVVDKVI+D H I+GK VEIKRTIP+G +K KTKKIF
Sbjct: 83 MKDRATGNPRGFGFVTYADPSVVDKVIKDKHFIDGKMVEIKRTIPRGNAATKGPKTKKIF 142
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+S+ EDEFKD+F +FG V EHQIM+DH T RSRGFGF+TFD+E+AV+++L+ G
Sbjct: 143 VGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKM 202
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYG-----------SGFGDAYGGYGGG 169
EL G QVE+KKAEPKK LP+ P+PAYG G+GDAYGG G G
Sbjct: 203 CELGGKQVEIKKAEPKK-ALPE--------PEPAYGMDGRPPFIPGARGYGDAYGGVGAG 253
Query: 170 GF 171
+
Sbjct: 254 DY 255
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + F +F ++G++ + IM+D +T RGFGF+T+ VD ++
Sbjct: 52 KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIK- 110
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE+K+ P+
Sbjct: 111 -DKHFIDGKMVEIKRTIPR 128
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 149/212 (70%), Gaps = 18/212 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR+TG+PRGFGF+TYADPSVVD+VI++THIINGKQVEIKRTIP+G+ S DFKT+KIF
Sbjct: 50 MKDRQTGRPRGFGFITYADPSVVDEVIQETHIINGKQVEIKRTIPRGSSQSNDFKTRKIF 109
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI +SV+EDEFK+FF ++G V EH+I+ DH T RSRGFGFI FD EQ VDDLL GN
Sbjct: 110 VGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNM 169
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNP--KPAYGSGFGDAYGGYGGGGFAGGG--- 175
+++ G QVE+KKAEPKK + +NP P++G GD+ GF+G G
Sbjct: 170 IDMEGTQVEIKKAEPKKSS---------SNPGRAPSFG---GDSRMQMYNDGFSGYGSDP 217
Query: 176 -FGGSGGGGGGGGYRSSGAYGVRGGGYGGYGV 206
G GG G YR+ G R G YGG +
Sbjct: 218 YSGLGSGGYGPASYRALGGIDSRLGDYGGVLI 249
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ N D F +F ++G++ + +M+D T R RGFGFIT+ VD+++ +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 79 THIIN--GKQVEIKRTIPR 95
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/141 (68%), Positives = 123/141 (87%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+PRGFGF+TYADPSVVD+VI++ H++NGKQVEIKRTIPKG+ + DFKTKKIF
Sbjct: 50 MKDRHTGRPRGFGFITYADPSVVDQVIQENHVVNGKQVEIKRTIPKGSSQANDFKTKKIF 109
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+SV+EDE K+FF ++G V EH+I+RDH+T RSRGFGFI FD+E+ VD++LA GN
Sbjct: 110 VGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNM 169
Query: 121 LELAGAQVEVKKAEPKKPNLP 141
+++ G QVE+KKAEPKK + P
Sbjct: 170 IDMGGTQVEIKKAEPKKSSNP 190
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + F +F ++G++ + IM+D T R RGFGFIT+ VD ++ +
Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 79 NHVVN--GKQVEIKRTIPK 95
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 119/137 (86%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR+TG+PRGFGF+TYADPSVVD+VI++THIINGKQVEIKRTIP+G+ S DFKT+KIF
Sbjct: 50 MKDRQTGRPRGFGFITYADPSVVDEVIQETHIINGKQVEIKRTIPRGSSQSNDFKTRKIF 109
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI +SV+EDEFK+FF ++G V EH+I+ DH T RSRGFGFI FD EQ VDDLL GN
Sbjct: 110 VGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNM 169
Query: 121 LELAGAQVEVKKAEPKK 137
+++ G QVE+KKAEPKK
Sbjct: 170 IDMEGTQVEIKKAEPKK 186
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ N D F +F ++G++ + +M+D T R RGFGFIT+ VD+++ +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ P+
Sbjct: 79 THIIN--GKQVEIKRTIPR 95
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 134/175 (76%), Gaps = 6/175 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGFVTYAD SVVDKVIED HI++G+ VEIKRTIP+G SK KTKKIF
Sbjct: 78 MKDRHTGQPRGFGFVTYADASVVDKVIEDKHILDGRTVEIKRTIPRGNT-SKGPKTKKIF 136
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP+++ EDEFKD+F +FG V EHQIM+D ST RSRGFGFITFD+EQ V++++++G
Sbjct: 137 VGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKM 196
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS----GFGDAYGGYGGGGF 171
+EL G QVE+KKAEPKKP+ +N +P Y GF D+Y G+ G G+
Sbjct: 197 IELGGKQVEIKKAEPKKPSSDAGPVHGIDN-RPPYIPGGVGGFRDSYSGFEGAGY 250
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ S F F ++G++ + IM+D T + RGFGF+T+ VD ++
Sbjct: 47 KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIE- 105
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K L G VE+K+ P+
Sbjct: 106 -DKHILDGRTVEIKRTIPR 123
>gi|449463368|ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
Length = 347
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/158 (70%), Positives = 131/158 (82%), Gaps = 8/158 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TGQPRGFGF+TYADPSVVDKVIEDTH+INGKQVEIKRTIPKG SKDFKTKKIF
Sbjct: 51 MKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIPS+V EDEFK FF ++G + EHQI+RDH T+RSRGFGFI F+ E+ VD++L+KGN
Sbjct: 111 VGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNM 170
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 158
++++G QVE+KKAEPKK + P P+ PAYGS
Sbjct: 171 IDMSGTQVEIKKAEPKKSSNPLPA--------PAYGSN 200
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +F F +G++ + IM+D T + RGFGFIT+ VD ++
Sbjct: 20 KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 117/134 (87%), Gaps = 2/134 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--SKDFKTKK 58
M+DR TGQPRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKGA G SKD KTKK
Sbjct: 51 MRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKK 110
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDE KDFF ++G+V EHQ++RDH T+RSRGFGF+ FD+E+ VD+LL+KG
Sbjct: 111 IFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKG 170
Query: 119 NKLELAGAQVEVKK 132
N +++A QV + K
Sbjct: 171 NMIDMADTQVSLYK 184
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IMRD T + RGFGFITF VD ++
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 117/134 (87%), Gaps = 2/134 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--SKDFKTKK 58
M+DR TGQPRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKGA G SKD KTKK
Sbjct: 51 MRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKK 110
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDE KDFF ++G+V EHQ++RDH T+RSRGFGF+ FD+E+ VD+LL+KG
Sbjct: 111 IFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKG 170
Query: 119 NKLELAGAQVEVKK 132
N +++A QV + K
Sbjct: 171 NMIDMADTQVSLYK 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IMRD T + RGFGFITF VD ++
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 THVIN--GKQVEIKRTIPK 96
>gi|297829856|ref|XP_002882810.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328650|gb|EFH59069.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 231
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 115/130 (88%), Gaps = 2/130 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--SKDFKTKK 58
M+DR TGQPRGFGF+T+ADPSVVDKVIED HIINGKQVEIKRTIPKGA G SKDFKTKK
Sbjct: 51 MRDRHTGQPRGFGFITFADPSVVDKVIEDNHIINGKQVEIKRTIPKGAGGNQSKDFKTKK 110
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGIPS+V EDE KDFF ++G+V EHQ++RDH T+RSRGFGF+ FD+E+ VD+LL+KG
Sbjct: 111 IFVGGIPSTVTEDELKDFFSKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKG 170
Query: 119 NKLELAGAQV 128
N +++A QV
Sbjct: 171 NMIDMADTQV 180
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IMRD T + RGFGFITF VD ++
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 80 NHIIN--GKQVEIKRTIPK 96
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 119/146 (81%), Gaps = 8/146 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR T +PRGFGF+T+ADP+VVD+VIED H+INGK+VEIKRTIPKGA KDFKTKKIF
Sbjct: 47 MKDRFTQKPRGFGFITFADPAVVDRVIEDNHVINGKEVEIKRTIPKGAAPLKDFKTKKIF 106
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGN 119
VGG+PS++ EDEFK+FF +FG V EH+I+RDHST+RSRGFGF+ FD E+ VD+LLA KGN
Sbjct: 107 VGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGN 166
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSY 145
++L G+Q +P+LP P +
Sbjct: 167 MIDLNGSQAT-------RPSLPSPCH 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+P FK++F ++G++ + IM+D T + RGFGFITF VD ++
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIED 75
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G +VE+K+ PK
Sbjct: 76 NHVIN--GKEVEIKRTIPK 92
>gi|224061254|ref|XP_002300392.1| predicted protein [Populus trichocarpa]
gi|222847650|gb|EEE85197.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 115/131 (87%), Gaps = 1/131 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQ-VEIKRTIPKGAVGSKDFKTKKI 59
MKDR TGQPRGFGF+TYADPSVVDKVIEDTH+INGKQ VEIKRTIPKG+ SKDFKTKKI
Sbjct: 51 MKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQQVEIKRTIPKGSGQSKDFKTKKI 110
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIPSSV EDEF++FF + G V EHQI+RDH T+RSRGFGFI FD+E+ VD++L+ GN
Sbjct: 111 FVGGIPSSVTEDEFQNFFSKHGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMLSNGN 170
Query: 120 KLELAGAQVEV 130
+++AG QV +
Sbjct: 171 MIDMAGTQVSL 181
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ F F ++G++ + IM+D T + RGFGFIT+ VD ++
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + QVE+K+ PK
Sbjct: 80 THVIN-GKQQVEIKRTIPK 97
>gi|413925207|gb|AFW65139.1| hypothetical protein ZEAMMB73_790427, partial [Zea mays]
Length = 221
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 113/133 (84%), Gaps = 2/133 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV--GSKDFKTKK 58
MKDR T QPRGFGF+TY+DP+VVDKVIED H+INGKQVEIKRTIPKG+V SKDFKTKK
Sbjct: 57 MKDRHTSQPRGFGFITYSDPAVVDKVIEDNHVINGKQVEIKRTIPKGSVQSSSKDFKTKK 116
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGG+PS++ EDEFK FF ++G V +HQIM DH T RSRGFGFI F +EQ VDDLLA G
Sbjct: 117 IFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANG 176
Query: 119 NKLELAGAQVEVK 131
N ++LAG++V +K
Sbjct: 177 NMVDLAGSKVSLK 189
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P + F F Q+G++ + IM+D TS+ RGFGFIT+ VD ++
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G QVE+K+ PK
Sbjct: 86 NHVIN--GKQVEIKRTIPK 102
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 141/206 (68%), Gaps = 22/206 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+PRGFGF+TYAD SVVD+VI++ HIIN KQVEIKRTIPKGA + DFKTKKIF
Sbjct: 50 MKDRHTGRPRGFGFITYADASVVDQVIQENHIINDKQVEIKRTIPKGASQTNDFKTKKIF 109
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN- 119
VGGIP++V+EDE K FF + G+V EH+I+RDH+T RSRGFGF+ FD+++AVD+LLA GN
Sbjct: 110 VGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNM 169
Query: 120 -----------------KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP-AYGSGFG- 160
K+E A VE+KKAEPKK + ++ + +Y GFG
Sbjct: 170 IDMDDTQVSLVRLFMVFKIETGDATVEIKKAEPKKSSNSSSFPSFGSDSRARSYNGGFGG 229
Query: 161 --DAYGGYGGGGFAGGGFGGSGGGGG 184
D+YG + GGG+ + GG GG
Sbjct: 230 FDDSYGSFPGGGYGPASYRSLGGIGG 255
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +EF +F ++G++ + IM+D T R RGFGFIT+ VD ++ +
Sbjct: 19 KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + QVE+K+ PK
Sbjct: 79 NHIIN--DKQVEIKRTIPK 95
>gi|215712318|dbj|BAG94445.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 382
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 108/128 (84%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T QPRGFGF+TY++P+VVD+V++D H NGKQVEIKRTIPK +V SKDFKTKKIF
Sbjct: 1 MRDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIF 60
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P ++ ED+FK FF ++G V +HQIMRDH T RSRGFGFI F ++Q VDDLLA GN
Sbjct: 61 VGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNM 120
Query: 121 LELAGAQV 128
++LAGA++
Sbjct: 121 IDLAGAKL 128
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 108/128 (84%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T QPRGFGF+TY++P+VVD+V++D H NGKQVEIKRTIPK +V SKDFKTKKIF
Sbjct: 55 MRDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIF 114
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P ++ ED+FK FF ++G V +HQIMRDH T RSRGFGFI F ++Q VDDLLA GN
Sbjct: 115 VGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNM 174
Query: 121 LELAGAQV 128
++LAGA++
Sbjct: 175 IDLAGAKL 182
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P E +F F Q+G++ + IMRD TS+ RGFGFIT+ VD ++
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVM-- 81
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ E G QVE+K+ PK
Sbjct: 82 DDIHEFNGKQVEIKRTIPK 100
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKI
Sbjct: 131 MKDKHTRMPRGFGFVTFSDPSVLDRVLEDAHVIDGRTVEVKRTVPKEEMSSKDGPKTKKI 190
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIPSS+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 191 FVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGR 250
Query: 120 KLELAGAQVEVKKAEPKKP 138
+L G QVE+KKAEPKKP
Sbjct: 251 MHDLGGKQVEIKKAEPKKP 269
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 100 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 159
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ PK+
Sbjct: 160 AHVID--GRTVEVKRTVPKE 177
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKI
Sbjct: 132 MKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKI 191
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 192 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGR 251
Query: 120 KLELAGAQVEVKKAEPKKP 138
+L G QVE+KKAEPKKP
Sbjct: 252 MHDLGGKQVEIKKAEPKKP 270
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ PK+
Sbjct: 161 EHVID--GRTVEVKRTVPKE 178
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKI
Sbjct: 132 MKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKI 191
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 192 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGR 251
Query: 120 KLELAGAQVEVKKAEPKKP 138
+L G QVE+KKAEPKKP
Sbjct: 252 MHDLGGKQVEIKKAEPKKP 270
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ PK+
Sbjct: 161 EHVID--GRTVEVKRTVPKE 178
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 211 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKI 270
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PSS+ EDE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 271 FVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 330
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 331 MRDLGGKQVEIKKAEPKK 348
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 180 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 239
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 240 EHVID--GRTVEVKRTVPRE 257
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 146 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKI 205
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P S+ EDE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G
Sbjct: 206 FIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGR 265
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 266 MRDLGGKQVEIKKAEPKK 283
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 115 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 174
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ--PSYRR 147
+ ++ G VEVK+ P++ + + P R+
Sbjct: 175 DHVID--GRTVEVKRTVPREEMITKDGPKTRK 204
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 87 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREEMNTKDGPKTRKI 146
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P+S+ EDE KD F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 147 FIGGLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 206
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 207 MRDLGGKQVEIKKAEPKK 224
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 116 EHVID--GRTVEVKRTVPRE 133
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 112/139 (80%), Gaps = 2/139 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKI
Sbjct: 125 MKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPK-ELSSKDGPKTKKI 183
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 184 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGR 243
Query: 120 KLELAGAQVEVKKAEPKKP 138
+L G QVE+KKAEPKKP
Sbjct: 244 MHDLGGKQVEIKKAEPKKP 262
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ PK+
Sbjct: 154 EHVID--GRTVEVKRTVPKE 171
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 111/138 (80%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 88 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMTTKDGPKTRKI 147
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P S+ EDE KD F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 148 FIGGLPPSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 207
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 208 MRDLGGKQVEIKKAEPKK 225
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 57 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 116
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 117 DHVID--GRTVEVKRTVPRE 134
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV++D H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 123 MKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKTRKI 182
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G
Sbjct: 183 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGR 242
Query: 120 KLELAGAQVEVKKAEPKKP 138
+LAG QVE+KKAEPKKP
Sbjct: 243 MHDLAGKQVEIKKAEPKKP 261
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 152 EHTID--GRTVEVKRTVPRE 169
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 87 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKI 146
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P S+ EDE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G
Sbjct: 147 FIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGR 206
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 207 MRDLGGKQVEIKKAEPKK 224
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ--PSYRR 147
+ ++ G VEVK+ P++ + + P R+
Sbjct: 116 DHVID--GRTVEVKRTVPREEMITKDGPKTRK 145
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 98 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKI 157
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PSS+ EDE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 158 FVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 217
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 218 MRDLGGKQVEIKKAEPKK 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 127 EHVID--GRTVEVKRTVPRE 144
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 98 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKI 157
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PSS+ EDE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 158 FVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 217
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 218 MRDLGGKQVEIKKAEPKK 235
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 127 EHVID--GRTVEVKRTVPRE 144
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV++D H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 60 MKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKTRKI 119
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G
Sbjct: 120 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGR 179
Query: 120 KLELAGAQVEVKKAEPKKP 138
+LAG QVE+KKAEPKKP
Sbjct: 180 MHDLAGKQVEIKKAEPKKP 198
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 89 EHTID--GRTVEVKRTVPRE 106
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 87 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKI 146
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P S+ EDE KD F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 147 FIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGR 206
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 207 MRDLGGKQVEIKKAEPKK 224
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ--PSYRR 147
+ ++ G VEVK+ P++ + + P R+
Sbjct: 116 DHVID--GRTVEVKRTVPREEMITKDGPKTRK 145
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV++D H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 1 MKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKTRKI 60
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G
Sbjct: 61 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGR 120
Query: 120 KLELAGAQVEVKKAEPKKP 138
+LAG QVE+KKAEPKKP
Sbjct: 121 MHDLAGKQVEIKKAEPKKP 139
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 69 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKTRKI 128
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+P S+ EDE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G
Sbjct: 129 FIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGR 188
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 189 MRDLGGKQVEIKKAEPKK 206
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 38 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 97
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ--PSYRRY---NNPKPAYGSGFGDAYGGYGG 168
+ ++ G VEVK+ P++ + + P R+ P D + YG
Sbjct: 98 DHVID--GRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGN 151
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 97 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKI 156
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+P+S++ED+ +D F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 157 FVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGR 216
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 217 MRDLGGKQVEIKKAEPKK 234
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 125
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 126 EHNID--GRTVEVKRTVPRE 143
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H I+G+ VE+KRT+P+ + +KD KT+KI
Sbjct: 115 MKDKHTKMPRGFGFVTFSDPSVIDRVLEDEHTIDGRTVEVKRTVPREEMSTKDGPKTRKI 174
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP+S+ E + K+ F +G V+EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 175 FVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGR 234
Query: 120 KLELAGAQVEVKKAEPKKP 138
+L G QVE+K+AEPKKP
Sbjct: 235 MHDLGGKQVEIKRAEPKKP 253
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLED 143
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 144 EHTID--GRTVEVKRTVPRE 161
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 94 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKI 153
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PS++ ED+ +D F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 154 FVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGR 213
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 214 MRDLGGKQVEIKKAEPKK 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 123 EHNID--GRTVEVKRTVPRE 140
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 94 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKI 153
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PS++ ED+ +D F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 154 FVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGR 213
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 214 MRDLGGKQVEIKKAEPKK 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 123 EHNID--GRTVEVKRTVPRE 140
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+DKV+ED H I+G+ VE+KRT+P+ + SKD KT+KI
Sbjct: 77 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKI 136
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+P+S++ED+ +D F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G
Sbjct: 137 FVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGR 196
Query: 120 KLELAGAQVEVKKAEPKK 137
+L G QVE+KKAEPKK
Sbjct: 197 MRDLGGKQVEIKKAEPKK 214
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 106 EHNID--GRTVEVKRTVPRE 123
>gi|261488392|emb|CBH19571.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 188
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 98/119 (82%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T QPRGFGF+TY++P+VVD+V++D H NGKQVEIKRTIPK +V SKDFKTKKIF
Sbjct: 55 MRDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIF 114
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
VGG+P + ED+FK FF ++G V +HQIMRDH T RSRGFGFI F ++Q VDDLLA G
Sbjct: 115 VGGLPQAQAEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGK 173
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P E +F F Q+G++ + IMRD TS+ RGFGFIT+ VD ++
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ E G QVE+K+ PK
Sbjct: 84 IH--EFNGKQVEIKRTIPK 100
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 107/132 (81%), Gaps = 2/132 (1%)
Query: 8 QPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKIFVGGIPS 66
PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKIFVGGIP
Sbjct: 1 MPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPK-ELSSKDGPKTKKIFVGGIPP 59
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 126
S+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 60 SLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGK 119
Query: 127 QVEVKKAEPKKP 138
QVE+KKAEPKKP
Sbjct: 120 QVEIKKAEPKKP 131
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED--THIINGKQVEIKRTIPK 46
M D TG+ RGFGFVT+ V++V+ + H + GKQVEIK+ PK
Sbjct: 82 MLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK 129
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
M DR TG+PRGFGF+T+ADP+V DKV+E+ H+I+G+ VE+K+T+P+ + + KT+KI
Sbjct: 83 MMDRHTGRPRGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPREGMEVRGVSKTRKI 142
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIPSS+ EDE KD+F +G + E+QIM DH T RSRGFGF+TF +E AV+ L ++G
Sbjct: 143 FVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGK 202
Query: 120 KLELAGAQVEVKKAEPKK 137
EL G VE+KKAEPK+
Sbjct: 203 THELGGKLVEIKKAEPKR 220
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +E+ F ++F +G++ + IM D T R RGFGFITF D +L +
Sbjct: 52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 111
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVKK P++
Sbjct: 112 DHVID--GRAVEVKKTVPRE 129
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG-SKDFKTKKI 59
MKDR TG PRGFGFVT+ADP V DKV+ D H+I+G+ VE K+++P+ + SK KTKKI
Sbjct: 33 MKDRSTGHPRGFGFVTFADPDVCDKVVLDKHVIDGRTVEAKKSVPRENLATSKGPKTKKI 92
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ++EFK +F FG V EHQIM+DHST RSRGFGF+TFD+EQ V+D+LA G
Sbjct: 93 FVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGK 152
Query: 120 KLELAGAQV 128
ELAG QV
Sbjct: 153 LHELAGKQV 161
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + D + F ++G++ + IM+D ST RGFGF+TF D ++
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVL- 60
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+K + G VE KK+ P++ NL
Sbjct: 61 -DKHVIDGRTVEAKKSVPRE-NL 81
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
M DR TG+PRGFGF+T+ADP+V DKV+E+ H+I+G+ VE+K+T+P+ + + KT+KI
Sbjct: 231 MMDRHTGRPRGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPREGMEVRGVSKTRKI 290
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIPSS+ EDE KD+F +G + E+QIM DH T RSRGFGF+TF +E AV+ L ++G
Sbjct: 291 FVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGK 350
Query: 120 KLELAGAQVEVKKAEPKK 137
EL G VE+KKAEPK+
Sbjct: 351 THELGGKLVEIKKAEPKR 368
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+G D +K+FVGGI +E+ F ++F +G++ + IM D T R RGFGFITF
Sbjct: 191 MGESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADP 250
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
D +L + + ++ G VEVKK P++
Sbjct: 251 AVADKVLEEDHVID--GRAVEVKKTVPRE 277
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 144/240 (60%), Gaps = 23/240 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
M D+ TG+PRGFGFVT+ DP++ D V++ HII+G+ VE+KRT+P+ + K +TKKI
Sbjct: 455 MIDKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKI 514
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP + E+EFKD+F FG + EHQIM D+ T RSRGFGFITF+ E +V+++ +
Sbjct: 515 FVGGIPPGLTEEEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDR 574
Query: 120 KLELAGAQVEVKKAEPKK------PNLPQPS----YR---RYNNPKPAYGSGFG--DAYG 164
EL G QVE+KKA PK+ N Q S YR Y++ G+ FG D Y
Sbjct: 575 IHELGGKQVEIKKAVPKRVAYDFNSNSGQTSGYDMYRCGGLYDD---IIGTDFGPYDLYA 631
Query: 165 GYGGGGFAGGGFGGS--GGGGGGGGYRSSGAYGVRGGGYG--GYGVGGEFGGYGGYGGGM 220
YGG G F G+ G G G +G YG+ G G GYG+ G GY G GG M
Sbjct: 632 PYGGFGVNYASFYGAYNYGFGYGASMYMNGRYGMNGYGTPSVGYGINGYGKGYEGNGGSM 691
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED F+D+F ++G++ + IM D T R RGFGF+TF + A+ D++ K
Sbjct: 424 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTF-CDPAIADMVLK 482
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + + G VEVK+ P+
Sbjct: 483 IDHI-IDGRAVEVKRTVPR 500
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-GAVGSKDFKTKKI 59
MKDR TG PRGFGFVT+ADP+V D V+ D H+I+G+ VE K+++P+ SK KTKKI
Sbjct: 33 MKDRSTGHPRGFGFVTFADPAVCDNVVLDKHVIDGRTVEAKKSVPRENMAASKGPKTKKI 92
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ++EFK +F FG V EHQIM+DHST RSRGFGF+TFD+EQ V+D+LA G
Sbjct: 93 FVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGK 152
Query: 120 KLELAGAQV 128
EL G QV
Sbjct: 153 MHELGGKQV 161
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + D + F ++G++ + IM+D ST RGFGF+TF D+++
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL- 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + G VE KK+ P++
Sbjct: 61 -DKHVIDGRTVEAKKSVPRE 79
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 142/243 (58%), Gaps = 28/243 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
M D+ TG+PRGFGFVT+ DP++ D V++ HII+G+ VE+KRT+P+ + K +TKKI
Sbjct: 453 MIDKHTGRPRGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKI 512
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP + E EFKD+F FG + EHQIM D+ T RSRGFGFITF+ E +VD++ +
Sbjct: 513 FVGGIPPGLTEVEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDR 572
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPS-----------YR---RYNNPKPAYGSGFG--DAY 163
EL G QVE+KKA PKK S YR Y++ G+ FG D Y
Sbjct: 573 IHELGGKQVEIKKAVPKKVAYDFNSNSGHTSSGYDMYRCGGLYDD---IIGTDFGPYDLY 629
Query: 164 GGYGGGGFAGGGFGGS--GGGGGGGGYRSSGAYGVRGGGYG----GYGVGGEFGGYGGYG 217
YGG G F G+ G G G +G YG+ GYG GYG+ G GY G G
Sbjct: 630 APYGGFGGNYASFYGAYNYGFGFGASMYMNGRYGM--NGYGAPSVGYGINGYGKGYEGNG 687
Query: 218 GGM 220
G M
Sbjct: 688 GSM 690
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED F D+F ++G++ + IM D T R RGFGF+TF + A+ D++ K
Sbjct: 422 KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTF-CDPAIADMVLK 480
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + + G VEVK+ P+
Sbjct: 481 IDHI-IDGRAVEVKRTVPR 498
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-GAVGSKDFKTKKI 59
MKDR TG PRGFGFVT+ADP+V D V+ D H+I+G+ VE K+++P+ SK KTKKI
Sbjct: 33 MKDRSTGHPRGFGFVTFADPAVCDNVVLDKHVIDGRTVEAKKSVPRENMAASKGPKTKKI 92
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ++EFK +F FG V EHQIM+DHST RSRGFGF+TFD EQ V+D+LA G
Sbjct: 93 FVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVEDILAHGK 152
Query: 120 KLELAGAQV 128
EL G QV
Sbjct: 153 MHELGGKQV 161
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + D + F ++G++ + IM+D ST RGFGF+TF D+++
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL- 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + G VE KK+ P++
Sbjct: 61 -DKHVIDGRTVEAKKSVPRE 79
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 122/179 (68%), Gaps = 8/179 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-DFKTKKI 59
M+DR +G+PRGFGFVT+AD + D+V+E+ HII+ + VE+KRT+P+ + K + +KI
Sbjct: 111 MRDRHSGRPRGFGFVTFADLAAADRVLEEDHIIDDRAVEVKRTVPREEMEVKGVVRARKI 170
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP ++ EDE ++F +G++ EHQIM DH T RSRGFGF+TF+TE +V+ + + G
Sbjct: 171 FVGGIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGR 230
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG 178
EL G +VE+KKA PK+ S +Y+ +GF + GGYG G +GG +GG
Sbjct: 231 THELGGKRVEIKKAVPKRNGGDYGSSGKYH-------TGFSNGAGGYGAGHNSGGLYGG 282
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
S D K+FVGGI E+ F +F +FG++ + IMRD + R RGFGF+TF A
Sbjct: 73 SSDSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAA 132
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKK 137
D +L + + ++ VEVK+ P++
Sbjct: 133 ADRVLEEDHIID--DRAVEVKRTVPRE 157
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 104/143 (72%), Gaps = 9/143 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M DR TG PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G KD
Sbjct: 98 MTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRG---DKDTDIKAVS 154
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
KT+KIFVGG+P + EDE K++F +GD+ EHQIM DH T RSRGFGF+TF TE +VD L
Sbjct: 155 KTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRL 214
Query: 115 LAKGNKLELAGAQVEVKKAEPKK 137
+ G EL QVE+K+AEPK+
Sbjct: 215 FSDGKVHELGDKQVEIKRAEPKR 237
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + F ++F +FG+V + IM D T RGFGF+TF + +L +
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ +V++K+ P+
Sbjct: 127 DHVID--DRKVDLKRTLPR 143
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 104/143 (72%), Gaps = 9/143 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M DR TG PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G KD
Sbjct: 121 MTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRG---DKDTDIKAVS 177
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
KT+KIFVGG+P + EDE K++F +GD+ EHQIM DH T RSRGFGF+TF TE +VD L
Sbjct: 178 KTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRL 237
Query: 115 LAKGNKLELAGAQVEVKKAEPKK 137
+ G EL QVE+K+AEPK+
Sbjct: 238 FSDGKVHELGDKQVEIKRAEPKR 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+FVGG+ + F ++F +FG+V + IM D T RGFGF+TF + +L
Sbjct: 88 VRKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVL 147
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
+ + ++ +V++K+ P+
Sbjct: 148 EEDHVID--DRKVDLKRTLPR 166
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 102/129 (79%), Gaps = 2/129 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKI 59
MKD+ T PRGFGFVT++DPSV+D+V+ED H+I+G+ VE+KRT+PK + SKD KTKKI
Sbjct: 125 MKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPK-ELSSKDGPKTKKI 183
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ ED+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G
Sbjct: 184 FVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGR 243
Query: 120 KLELAGAQV 128
+L G QV
Sbjct: 244 MHDLGGKQV 252
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ PK+
Sbjct: 154 EHVID--GRTVEVKRTVPKE 171
>gi|297813735|ref|XP_002874751.1| hypothetical protein ARALYDRAFT_911599 [Arabidopsis lyrata subsp.
lyrata]
gi|297320588|gb|EFH51010.1| hypothetical protein ARALYDRAFT_911599 [Arabidopsis lyrata subsp.
lyrata]
Length = 111
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 89/99 (89%)
Query: 8 QPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSS 67
P FGFVTYAD SVVDKVI+D HII GKQ+EIKRTIP+G++ S D KTKKIFVGGIPSS
Sbjct: 12 MPSRFGFVTYADSSVVDKVIQDNHIIIGKQIEIKRTIPRGSMRSNDIKTKKIFVGGIPSS 71
Query: 68 VNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
V++DEFK+FFMQFG+++EHQIMRDHST RSRGFGF+T++
Sbjct: 72 VDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYE 110
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 167/320 (52%), Gaps = 44/320 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-DFKTKKI 59
M ++ +G+PRGFGFVT+A+ +V D+V+ H I+ + VE+KRT+P+ V FKTKKI
Sbjct: 72 MTNKLSGRPRGFGFVTFANSAVADEVLAQEHTIDHRVVEVKRTVPREDVDVTGVFKTKKI 131
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGI +DE +++F +G+V E QIM DH+T RSRGFGF+TFD E +V+ + + G
Sbjct: 132 FVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGK 191
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ G QVE+K+AEPK+ + N + +YG GFG
Sbjct: 192 IHEIGGKQVEIKRAEPKRSGVDYC-----NTSRKSYG------------------GFGNE 228
Query: 180 GGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGGF 239
G GG R+ +G RGG Y G G+ G +G + G GG A G
Sbjct: 229 MDGHGGNSSRNRN-HGKRGGQYTGSGMNGAYGHFDGSFGGSAATVYGGYCGYGYEFGYG- 286
Query: 240 NRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGY-DI---GLGSSYGGSSGGAFFG 295
G +GGYG + G GGYG G + Y D+ G S+ GS G +
Sbjct: 287 -----------GPMYCFGGYGLNSYGNPGGYGSGITSYGDVNAYGRAGSFNGS--GGYDS 333
Query: 296 SRGGYGGAGGSS-RYHPYGR 314
S+ G G ++ RYHPY +
Sbjct: 334 SKVAEKGDGPTTGRYHPYWK 353
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 37 QVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSR 96
V++ K + +D + K+FVGGI +++ F ++F ++G+V + IM + + R
Sbjct: 20 NVDVNDEHVKPSFNRRDSFSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGR 79
Query: 97 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
RGFGF+TF D++LA+ + ++ VEVK+ P++
Sbjct: 80 PRGFGFVTFANSAVADEVLAQEHTID--HRVVEVKRTVPRE 118
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 128/243 (52%), Gaps = 39/243 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
M+D+ TG+PRGFGFV ++DPS++D+V++D H I+G+QVE KR + + +
Sbjct: 38 MRDKTTGRPRGFGFVVFSDPSLLDQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNS 97
Query: 54 ---------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
F+TKKIFVGG+PS++ ED F+ +F +G V + IM D +T R RGFGFIT
Sbjct: 98 GRSSGGSGYFRTKKIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFIT 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYG 164
FD E AVD +L K EL G VEVK+A PK N GSG Y
Sbjct: 158 FDNEDAVDRVLYKSFH-ELNGKLVEVKRALPKDANP---------------GSGGRAGYQ 201
Query: 165 GYGGGGFAGGGFGGSGGGG-------GGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYG 217
YG G F G G GG+ Y V G GYGG G +G YG YG
Sbjct: 202 NYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSVSGYGYGGPNSGVPYGSYGSYG 261
Query: 218 GGM 220
GM
Sbjct: 262 VGM 264
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E++ +D+F QFG+V + IMRD +T R RGFGF+ F +D +L
Sbjct: 7 KLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + G QVE K+A ++
Sbjct: 66 -DKHTIDGRQVEAKRALSRE 84
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 103/141 (73%), Gaps = 10/141 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKT---- 56
MKD+ T PRGFGFVT++DPSV+DKV+ED H+I+G RT+ + GS K
Sbjct: 207 MKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDG------RTLKGQSQGSNVIKDGPRP 260
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+PSS+ EDE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ +++
Sbjct: 261 RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVIS 320
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+G +L G QVE+KKAEPKK
Sbjct: 321 EGRMRDLGGKQVEIKKAEPKK 341
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E+ F F ++G + + IM+D T RGFGF+TF +D +L
Sbjct: 176 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 235
Query: 118 GNKLE 122
+ ++
Sbjct: 236 EHVID 240
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-GAVGSKDFKTKKI 59
M+DR +G PRGFGFVT+AD V D+V+ D H+++G+ VE KR+IP+ + K KTKKI
Sbjct: 33 MRDRSSGNPRGFGFVTFADSDVCDRVLRDKHVLDGRTVECKRSIPRESMLVVKGPKTKKI 92
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ E+EFK +F FG+V EHQIM+DH+T RSRGFGFI FD+EQ V+D+L+ G
Sbjct: 93 FVGGIPPSITEEEFKAYFSSFGNVIEHQIMQDHNTGRSRGFGFIVFDSEQTVEDVLSHGR 152
Query: 120 KLELAGAQV 128
EL G QV
Sbjct: 153 MHELGGKQV 161
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ ++ + F ++G++ + IMRD S+ RGFGF+TF D +L
Sbjct: 2 KIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLR- 60
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+K L G VE K++ P++ L
Sbjct: 61 -DKHVLDGRTVECKRSIPRESML 82
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 98/128 (76%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M DR +G+PRGFGFVT+ADP V D+V+E+ H+I+G+ VE+KRT+P+ + + +TKKIF
Sbjct: 32 MTDRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPREDMEVRVTRTKKIF 91
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP S+ EDE K++F +G + +HQIM DH T RSRGFGF+TFD+E AV+ + ++G
Sbjct: 92 VGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRT 151
Query: 121 LELAGAQV 128
EL G QV
Sbjct: 152 HELGGKQV 159
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ F ++F ++G+V + IM D + R RGFGF+TF D +L +
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 61 DHVID--GRAVEVKRTVPRE 78
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 98/128 (76%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M DR +G+PRGFGFVT+ADP V D+V+E+ H+I+G+ VE+KRT+P+ + + +TKKIF
Sbjct: 17 MTDRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPREDMEVRVTRTKKIF 76
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGIP S+ EDE K++F +G + +HQIM DH T RSRGFGF+TFD+E AV+ + ++G
Sbjct: 77 VGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRT 136
Query: 121 LELAGAQV 128
EL G QV
Sbjct: 137 HELGGKQV 144
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
F ++F ++G+V + IM D + R RGFGF+TF D +L + + ++ G VEVK+
Sbjct: 1 FTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEEDHVID--GRAVEVKR 58
Query: 133 AEPKK 137
P++
Sbjct: 59 TVPRE 63
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-DFKTKKI 59
M DR +G+PRGFGFVT+ADP+V D+V+E+ H+I+G+ VE+KRT+P+ + K +TKKI
Sbjct: 32 MTDRHSGRPRGFGFVTFADPAVADRVLEEDHVIDGRAVEVKRTVPREDMDVKGVTRTKKI 91
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIP S+ EDE K++F +G + +HQIM DH T RSRGFGF+TFD E AV+ + ++G
Sbjct: 92 FVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGR 151
Query: 120 KLELAGAQV 128
EL G QV
Sbjct: 152 THELGGKQV 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ F ++F ++G+V + IM D + R RGFGF+TF D +L +
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVADRVLEE 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VEVK+ P++
Sbjct: 61 DHVID--GRAVEVKRTVPRE 78
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 144/266 (54%), Gaps = 43/266 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADPS ++VI D HII+G+ VE K+ +P+ + +
Sbjct: 38 MRDRTTGRARGFGFVVFADPSAAERVIMDKHIIDGRTVEAKKAVPRDDQQTINRQSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+PS++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYG------SGFGDA 162
+AVD +L K EL G VEVK+A PK+ + P P+ +P Y SGF ++
Sbjct: 158 EAVDRVLYKTFH-ELNGKMVEVKRAVPKELS-PGPT----RSPLIGYNYGLNRTSGFLNS 211
Query: 163 YGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG----GYGGYGVG--------GEF 210
Y GF GG G G R S R G G GYG+G +
Sbjct: 212 Y----AQGFNMNPIGGYGVRMDG---RFSPLTSARSGFSPFGSSGYGMGVNLDLGLNPSY 264
Query: 211 GGYGGYGGGMGAYRGEPSSLGYSGRY 236
GG YGG +G R P + G S RY
Sbjct: 265 GGTSSYGGSLGYARMSPFNNGNSNRY 290
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +++ K++F ++G+V E IMRD +T R+RGFGF+ F A + ++
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHIIDGRTVEAKKAVPR 83
>gi|297850158|ref|XP_002892960.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
gi|297338802|gb|EFH69219.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 102/141 (72%), Gaps = 13/141 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFK----T 56
M DR TG PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G + D K T
Sbjct: 91 MTDRITGNPRGFGFVTFADSAVAEKVLEEEHVIDDRKVDLKRTVPRGDRDT-DIKAVSKT 149
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+P + EDE K++F +GD+ EHQIM DH T RSRGFGF+TF TE +VD L
Sbjct: 150 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRL-- 207
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ A+V++K+AEPK+
Sbjct: 208 ------FSDAKVDIKRAEPKR 222
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ F ++F +FG+V + IM D T RGFGF+TF + +L +
Sbjct: 60 KLFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 119
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ +V++K+ P+
Sbjct: 120 EHVID--DRKVDLKRTVPR 136
>gi|147804734|emb|CAN67089.1| hypothetical protein VITISV_033546 [Vitis vinifera]
Length = 145
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
M DR TG+PRGFGF+T+ADP+V DKV+E+ H+I+G+ VE+K+T+P+ + + KT+KI
Sbjct: 1 MMDRHTGRPRGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPREGMEVRGVSKTRKI 60
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGIPSS+ EDE KD+F +G + E+QIM DH T RSRGFGF+TF +E AV+ L ++G
Sbjct: 61 FVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGK 120
Query: 120 KLELAGAQVEVK 131
EL G V ++
Sbjct: 121 THELGGKLVTLR 132
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 24/179 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADPSV ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 44 MRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 103
Query: 55 -------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
+TKKIFVGG+PSS+ E EFK++F QFG + + +M DH+T R RGFG
Sbjct: 104 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFG 163
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
FITFD+E++VD +L K EL G VEVK+A PK+ + P+ +P YG+ +G
Sbjct: 164 FITFDSEESVDMVLHKTFH-ELNGKMVEVKRAVPKELSSTTPN----RSPLIGYGNNYG 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F ++GD+ E IMRD +T R+RGFGFI F + ++
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM- 71
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGG 170
+K + G VE KKA P+ Q +R+ +P ++GG GGG
Sbjct: 72 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASPMHL----ISPSHGGNGGGA 116
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 24/179 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADPSV ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 47 MRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 106
Query: 55 -------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
+TKKIFVGG+PSS+ E EFK++F QFG + + +M DH+T R RGFG
Sbjct: 107 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFG 166
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
FITFD+E++VD +L K EL G VEVK+A PK+ + P+ +P YG+ +G
Sbjct: 167 FITFDSEESVDMVLHKTFH-ELNGKMVEVKRAVPKELSSTTPN----RSPLIGYGNNYG 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F ++GD+ E IMRD +T R+RGFGFI F + ++
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM- 74
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+K + G VE KKA P+ Q +R+ +P ++GG GGG F
Sbjct: 75 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASPMHL----ISPSHGGNGGGARTKKIFV 126
Query: 178 G 178
G
Sbjct: 127 G 127
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-------------- 46
MKDR TG+ RGFGFV +ADPSV ++V+ + H+I+G+ VE K+ +P+
Sbjct: 1 MKDRTTGRARGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSH 60
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
G+ +TKKIFVGG+ S+V E +FK++F QFG + + +M DH+T R RGFGFIT+D
Sbjct: 61 GSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 120
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+E+AV+ +L K EL G VEVK+A PK + P PS
Sbjct: 121 SEEAVEKVLHKTFH-ELNGKMVEVKRAVPKDLS-PSPS 156
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 24/179 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADPSV ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 44 MRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 103
Query: 55 -------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
+TKKIFVGG+PSS+ E EFK++F QFG + + +M DH+T R RGFG
Sbjct: 104 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFG 163
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
FITFD+E++VD +L K EL G +EVK+A PK+ + P+ +P YG+ +G
Sbjct: 164 FITFDSEESVDMVLHKTFH-ELNGKMIEVKRAVPKELSSTTPN----RSPLIGYGNNYG 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F ++GD+ E IMRD +T R+RGFGFI F + ++
Sbjct: 13 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM- 71
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGG 170
+K + G VE KKA P+ Q +R+ +P ++GG GGG
Sbjct: 72 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASPMHL----ISPSHGGNGGGA 116
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADPSV ++VI D HII+G+ VE K+ +P+ + +
Sbjct: 38 MRDRVTGRARGFGFVVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQNINRQSGSAH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+PS++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 ASPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 158 EAVDRVLYKTFH-ELNGKMVEVKRAVPKE 185
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ KD+F ++G+V E IMRD T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHIIDGRTVEAKKAVPR 83
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 112/179 (62%), Gaps = 24/179 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADPSV ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 40 MRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 99
Query: 55 -------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
+TKKIFVGG+PSS+ E EFK++F QFG + + +M DH+T R RGFG
Sbjct: 100 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFG 159
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
FITFD+E++VD +L K EL G VEVK+A PK+ + P+ +P YG+ +G
Sbjct: 160 FITFDSEESVDMVLHKTFH-ELNGKMVEVKRAVPKELSSTTPN----RSPLIGYGNNYG 213
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F ++GD+ E IMRD +T R+RGFGFI F + ++
Sbjct: 9 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM- 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+K + G VE KKA P+ Q +R+ +P ++GG GGG F
Sbjct: 68 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASPMHL----ISPSHGGNGGGARTKKIFV 119
Query: 178 G 178
G
Sbjct: 120 G 120
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 162/320 (50%), Gaps = 43/320 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV +ADP+V ++VI++ H I+G+ VE K+ +PK ++ S++
Sbjct: 38 MKDRTTGRARGFGFVVFADPAVAERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+++E
Sbjct: 98 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGSG 158
+AVD +L K EL G VEVK+A PK+ + P P R N+ AY G
Sbjct: 158 EAVDKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPIRSQLGGFNYGLSRVNSFLSAYNQG 215
Query: 159 FG-DAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYG 217
+ GGYG G F S GG + ++ YG RG G F GY
Sbjct: 216 YAPSTVGGYGVR--MDGRFSLSQSYGGSANFNNNLNYG-RGLNPYYIGNTNRFNSTIGYD 272
Query: 218 GGMG--------AYRGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGG 269
GG G A R + G SG G + ++ GG YG G+ V
Sbjct: 273 GGNGGNSSFFSSATRNLWGAFGNSGTSWGSSL---ISAQVGG----YGRNSGTSVAPTSS 325
Query: 270 YGGGPSGYDIGLGSSYGGSS 289
Y SGYD L Y G S
Sbjct: 326 YAASNSGYDGALAEFYSGGS 345
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED KD+F +G+V E IM+D +T R+RGFGF+ F + AV + + K
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA PK
Sbjct: 66 -EKHNIDGRMVEAKKAVPK 83
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 20/163 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADPSV ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 47 MRDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMH 106
Query: 55 -------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
+TKKIFVGG+PSS+ E EFK++F QFG + + +M DH+T R RGFG
Sbjct: 107 LISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFG 166
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
FITFD+E++VD +L K EL G VEVK+A PK+ + P+
Sbjct: 167 FITFDSEESVDMVLHKTFH-ELNGKMVEVKRAVPKELSSTTPN 208
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F ++GD+ E IMRD +T R+RGFGFI F + ++
Sbjct: 16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM- 74
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+K + G VE KKA P+ Q +R+ +P ++GG GGG F
Sbjct: 75 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASPMHL----ISPSHGGNGGGARTKKIFV 126
Query: 178 G 178
G
Sbjct: 127 G 127
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 120/190 (63%), Gaps = 25/190 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +ADP+V ++VI D H+I+G+ VE K+ +P+ + +++
Sbjct: 38 MRDRTTGRARGFGFVVFADPAVAERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V +++FK +F QFG++ + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTDNDFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGSG 158
AVD +L K EL G VEVK+A PK+ + P PS R NN AY G
Sbjct: 158 DAVDRVLHKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLIGYNYGLSRTNNFLNAYAQG 215
Query: 159 FG-DAYGGYG 167
+ ++ GG+G
Sbjct: 216 YNMNSVGGFG 225
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K++F ++G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIV- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRTVEAKKAVPR 83
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 99/155 (63%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
MKD+ TG+PRGFGFV +ADP+V+D V++D H I+G+ VE KR + + +
Sbjct: 38 MKDKTTGRPRGFGFVVFADPAVLDMVLQDKHTIDGRMVEAKRALSREEQQTNARAGNLNP 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ +TKKIFVGG+P ++ ED F+ +F FG V + IM D ST R RGFGFI+
Sbjct: 98 ARNTSGGGNIRTKKIFVGGLPPTLTEDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFIS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L + +L G QVEVK+A PK+ N
Sbjct: 158 FDTEDAVDRVLQRSFH-DLNGKQVEVKRALPKEAN 191
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E++ +D+F Q+GDV + +M+D +T R RGFGF+ F + AV D++ +
Sbjct: 7 KLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVF-ADPAVLDMVLQ 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPA 154
+K + G VE K+A ++ Q + R N PA
Sbjct: 66 -DKHTIDGRMVEAKRALSRE---EQQTNARAGNLNPA 98
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 105/156 (67%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG-------AVGSKD 53
MKDR TG+ RGFGF+ +ADPSV D+VI + H I+G+ VE KR +P+ GS +
Sbjct: 38 MKDRTTGRGRGFGFIVFADPSVADRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSIN 97
Query: 54 F-----KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EFK++F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 VSPGPGRTRKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AV+ +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EAVEKVLIKTFH-ELNGKMVEVKRAVPKELS-PGPS 191
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED K++F +GDV E IM+D +T R RGFGFI F D ++ +
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
K + G VE K+A P+
Sbjct: 67 --KHNIDGRMVEAKRAVPRN 84
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 16/158 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-------------- 46
MKDR TG+ RGFGFV +ADPSV ++V+ + H+I+G+ VE K+ +P+
Sbjct: 77 MKDRTTGRARGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQNVFTRSNSSSH 136
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
G+ +TKKIFVGG+ S+V E +FK++F QFG + + +M DH+T R RGFGFIT+D
Sbjct: 137 GSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 196
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+E+AV+ +L K EL G VEVK+A PK + P PS
Sbjct: 197 SEEAVEKVLHKTFH-ELNGKMVEVKRAVPKDLS-PSPS 232
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED + +F FGDV E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 106 KHVID--GRTVEAKKAVPR 122
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------------GA 48
M+DR TG+ RGFGFV + DPSV ++VI D HII+G+ VE K+ +P+
Sbjct: 72 MRDRVTGRARGFGFVVFGDPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQNINRQSGSAH 131
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
V +TKKIFVGG+PS++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 132 VSPGPGRTKKIFVGGLPSTITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 191
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AVD +L K EL G VEVK+A PK+ + P PS
Sbjct: 192 EAVDRVLYKTFH-ELNGKMVEVKRAVPKELS-PGPS 225
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K++F ++G+V E IMRD T R+RGFGF+ F + ++
Sbjct: 41 KLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIM- 99
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 100 -DKHIIDGRTVEAKKAVPR 117
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 108/157 (68%), Gaps = 15/157 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-----------GAV 49
MKDR TG+ RGFGFV +ADP+V ++VI++ H I+G+ VE K+ +P+ G++
Sbjct: 38 MKDRTTGRARGFGFVVFADPAVAERVIKEKHSIDGRMVEAKKAVPRDDQNILNRNSGGSI 97
Query: 50 GSKDF--KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
S +TKKIFVGG+ S+V E++FK++F QFG + + +M DH+T R RGFGFITFD+
Sbjct: 98 HSSPGPGRTKKIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
E+AVD +L + EL G VEVK+A PK+ + P PS
Sbjct: 158 EEAVDKVLMRTFH-ELNGKMVEVKRAVPKELS-PGPS 192
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K +F FG+V E IM+D +T R+RGFGF+ F + AV + + K
Sbjct: 7 KLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHSIDGRMVEAKKAVPR 83
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 118/191 (61%), Gaps = 22/191 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV ++DP+V ++VI D HII+G+ VE K+ +P+ + +
Sbjct: 38 MRDRATGRARGFGFVVFSDPAVAERVIIDKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQ 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+PS++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS------YRRY--NNPKPAYGSGFG 160
+AVD +L K EL G VEVK+A PK+ + P P+ Y Y N+ +Y + +G
Sbjct: 158 EAVDRVLYKTFH-ELNGKMVEVKRAVPKELS-PGPTRSPLIGYNNYSLNSRASSYLNNYG 215
Query: 161 DAYGGYGGGGF 171
Y GGF
Sbjct: 216 QGYSMSPIGGF 226
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K++F +G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVII- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHIIDGRTVEAKKAVPR 83
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 152/298 (51%), Gaps = 43/298 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
M+DR TG+ RGFGF+ +A+P V ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFIVFAEPGVAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSI 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K N EL G VEVK+A PK+ + P P R PA G + +
Sbjct: 158 DAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPVAR-----SPAGGQNYAISRVHNFL 210
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GF G + GG G R G +G+ G G+ G GYG GM G S
Sbjct: 211 NGFNQ---GYNPNPIGGYGMRVDGRFGLLSGARNGFSSFGP-----GYGMGMNVEAGMNS 262
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYG 286
+ G + + LN S G GS GG G P GY +GL G
Sbjct: 263 NFGVNSNF---------------LNNSNGRQIGSYYNGGSNRLGSPIGY-VGLNDDSG 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +E+ +++F +FG+V E IMRD +T R+RGFGFI F E V + +
Sbjct: 7 KLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVF-AEPGVAERVTM 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 100/149 (67%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADPS ++VI D HII+G+ VE K+ +P+ + +
Sbjct: 38 MRDRTTGRARGFGFVVFADPSAAERVIMDKHIIDGRTVEAKKAVPRDDQQTINRQTGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+PS++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 158 EAVDRVLYKTFH-ELNGKMVEVKRAVPKE 185
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +++ K++F ++G+V E IMRD +T R+RGFGF+ F A + ++
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHIIDGRTVEAKKAVPR 83
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 17/153 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADP V ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 38 MRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIH 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+TKKIFVGG+PSS+ E+EFK++F QFG + + +M DH+T R RGFGFIT
Sbjct: 98 LMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFIT 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
FD++ AVD +L K EL G VEVK+A PK+
Sbjct: 158 FDSDDAVDRVLHKTFH-ELNGKLVEVKRAVPKE 189
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +D+F +GDV E IMRD +T R+RGFGFI F + ++
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNP 151
+K + G VE KKA P+ Q +R+ +P
Sbjct: 66 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASP 95
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 17/153 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADP V ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 38 MRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIH 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+TKKIFVGG+PSS+ E+EFK++F QFG + + +M DH+T R RGFGFIT
Sbjct: 98 LMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFIT 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
FD++ AVD +L K EL G VEVK+A PK+
Sbjct: 158 FDSDDAVDRVLHKTFH-ELNGKLVEVKRAVPKE 189
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +D+F +GDV E IMRD +T R+RGFGFI F + ++
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNP 151
+K + G VE KKA P+ Q +R+ +P
Sbjct: 66 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASP 95
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 17/153 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADP V ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 38 MRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIH 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+TKKIFVGG+PSS+ E+EFK++F QFG + + +M DH+T R RGFGFIT
Sbjct: 98 LMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFIT 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
FD++ AVD +L K EL G VEVK+A PK+
Sbjct: 158 FDSDDAVDRVLHKTFH-ELNGKLVEVKRAVPKE 189
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +D+F +GDV E IMRD +T R+RGFGFI F + ++
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNP 151
+K + G VE KKA P+ Q +R+ +P
Sbjct: 66 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASP 95
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 14/158 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
M+DR TG+ RGFGF+ +ADP+V ++VI + H+I+G+ VE K+ +P+ SK
Sbjct: 38 MRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSTH 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+VNE +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPSRTKKIFVGGLASTVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+AVD L K EL G VEVK+A PK+ + P PS R
Sbjct: 158 EAVDKALFKTFH-ELNGKMVEVKRAVPKELS-PGPSMR 193
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +++F ++G+V E IMRD +T R+RGFGFI F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHMID--GRMVEAKKAVPR 83
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 117/211 (55%), Gaps = 35/211 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------------GA 48
MKDR T + RGFGFV +ADP++ D+V+ D H I+G+ VE K+ IP+
Sbjct: 38 MKDRTTRRARGFGFVVFADPAIADRVVLDKHTIDGRTVEAKKAIPRDDQQHMNRNSNIAH 97
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ +V E++F+ +F QFG + + +M DHST R RGFGFIT+D+E
Sbjct: 98 APPSQVRTKKIFVGGLAPTVTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD +L K +L G VEVK+A PK+ +P PA GG+G
Sbjct: 158 DAVDQVLQK-TFHDLNGKMVEVKRAVPKEL-----------SPSPAR-----TPIGGFGV 200
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGA--YGVR 197
G G F G G GY SS A YGVR
Sbjct: 201 AGNRGNNF----NIGYGQGYNSSPAVGYGVR 227
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D + K+F+GGI ED KD+F +FG+V E IM+D +T R+RGFGF+ F D
Sbjct: 2 DSEKGKLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIAD 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ +K + G VE KKA P+
Sbjct: 62 RVVL--DKHTIDGRTVEAKKAIPR 83
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Query: 26 VIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQ 84
V+ED H+I+G+ VE+KRT+PK + SKD KTKKIFVGGIP S+ ED+ K+ F +G V
Sbjct: 94 VLEDEHVIDGRTVEVKRTVPK-ELSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVV 152
Query: 85 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKP 138
EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G QVE+KKAEPKKP
Sbjct: 153 EHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKP 206
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED--THIINGKQVEIKRTIPK 46
M D TG+ RGFGFVT+ V++V+ + H + GKQVEIK+ PK
Sbjct: 157 MLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK 204
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ TG+PRGFGFV +ADPS++D+V+++ HII+G+ VE KR + + +
Sbjct: 38 MRDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNS 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ KTKKIFVGG+P +++E+ F+ +F FG V + +M D ST R RGFGF++
Sbjct: 98 ARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L K +L G QVEVK+A PK N
Sbjct: 158 FDTEDAVDRVLYK-TFHDLNGKQVEVKRALPKDAN 191
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED+ K++F +G+V + +MRD +T R RGFGF+ F +D +L +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 118 GNKLELAGAQVEVKKA 133
K + G VE K+A
Sbjct: 67 --KHIIDGRTVEAKRA 80
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ TG+PRGFGFV +ADPS++D+V+++ HII+G+ VE KR + + +
Sbjct: 38 MRDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNS 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ KTKKIFVGG+P +++E+ F+ +F FG V + +M D ST R RGFGF++
Sbjct: 98 ARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L K +L G QVEVK+A PK N
Sbjct: 158 FDTEDAVDRVLYK-TFHDLNGKQVEVKRALPKDAN 191
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED+ K++F +G+V + +MRD +T R RGFGF+ F +D +L +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 118 GNKLELAGAQVEVKKA 133
K + G VE K+A
Sbjct: 67 --KHIIDGRTVEAKRA 80
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%), Gaps = 8/143 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
MKDR TG+ RGFGFV + DPSV D+VI++ H I+G+ VE KR +P+ +
Sbjct: 38 MKDRTTGRARGFGFVVFGDPSVADRVIQEKHTIDGRAVEAKRVVPRDEQQNVQRTSNMAG 97
Query: 55 -KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+TKKIFVGG+ +V ED+F+ +F QFG++ + +M DH+T R RGFGFIT+D+E AVD
Sbjct: 98 PRTKKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDK 157
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
+L + +L VEVK+A PK
Sbjct: 158 VLQQ-TFHQLKEKTVEVKRAIPK 179
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GGI +ED KD+F +G V + IM+D +T R+RGFGF+ F D ++ +
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE K+ P+
Sbjct: 67 KHTID--GRAVEAKRVVPR 83
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 119/190 (62%), Gaps = 25/190 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +ADP V ++VI + H+++G+ VE K+ +P+ + S++
Sbjct: 38 MRDRVTGRARGFGFVVFADPIVAERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E++FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGSG 158
+AVD +L K EL G VEVK+A PK+ + P PS R NN AY G
Sbjct: 158 EAVDRVLHKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLMGYNYGLTRANNFLNAYAQG 215
Query: 159 FG-DAYGGYG 167
+ ++ GG+G
Sbjct: 216 YNMNSIGGFG 225
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K++F ++G+V E IMRD T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHVVD--GRTVEAKKAVPR 83
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 166/312 (53%), Gaps = 51/312 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGF+ +ADPSV D+VI++ H I+G+ VE KR IP+ + S++
Sbjct: 38 MKDRTTGRARGFGFIVFADPSVADRVIKEKHNIDGRMVEAKRAIPRDDQNIPSRNSVSSM 97
Query: 55 -------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
T+KIFVGG+ S+V E +FK++F QFG + + +M DH+T R RGFGFIT+D+
Sbjct: 98 HGSPGPDHTRKIFVGGLASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGS 157
++AVD +L K EL G VEVK+A PK+ + P P+ R N+ Y
Sbjct: 158 DEAVDKVLTKTFH-ELNGKMVEVKRAVPKELS-PGPTRSPLSGYSYGLSRVNSLLNGYSQ 215
Query: 158 GF-GDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGA-----YGVRGGGYGGYGVGGEFG 211
G+ ++ GGYG G + S G GGY + G+ + YG G
Sbjct: 216 GYPPNSVGGYGLR--MDGRY--SPVTVGRGGYPTIGSGHGMGINLEPTMSPTYGASTNLG 271
Query: 212 GYGGYGGGMGAY-----RGEPSSLGYSGRYGG-------FNRGYDVTGDYGGLNESYGGY 259
G GY GM +Y S +GY R GG F+R ++ G+ GGLN S G Y
Sbjct: 272 GNLGYPRGMNSYYIGNTNRLVSPIGYDSRNGGDTSFFSSFSR--NLWGN-GGLNHS-GNY 327
Query: 260 GGSGVGGGGGYG 271
GGS G G G
Sbjct: 328 GGSTAQVGSGSG 339
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI NE+ K++F FGDV E IM+D +T R+RGFGFI F D ++ +
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE 66
Query: 118 GNKLELAGAQVEVKKAEPK-KPNLPQ 142
K + G VE K+A P+ N+P
Sbjct: 67 --KHNIDGRMVEAKRAIPRDDQNIPS 90
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV +ADP+V ++VI++ H I+G+ VE K+ +PK ++ S++
Sbjct: 38 MKDRTTGRARGFGFVVFADPAVAERVIKEKHNIDGRMVEAKKAVPKDDQSILSRNSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+++E
Sbjct: 98 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 158 EAVDKVLLKTFH-ELNGKMVEVKRAVPKE 185
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED KD+F +G+V E IM+D +T R+RGFGF+ F + AV + + K
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA PK
Sbjct: 66 -EKHNIDGRMVEAKKAVPK 83
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 17/153 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADP V ++VI D HII+G+ VE K+ +P+ V +
Sbjct: 38 MRDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIH 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+TKKIFVGG+PSS+ E+EFK++F QFG + + +M DH+T R RGFGFIT
Sbjct: 98 LMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFIT 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
FD++ AVD +L K EL G VEVK+A PK+
Sbjct: 158 FDSDDAVDRVLHKTFH-ELNGKLVEVKRAVPKE 189
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +D+F +GDV E IMRD +T R+RGFGFI F + ++
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNP 151
+K + G VE KKA P+ Q +R+ +P
Sbjct: 66 -DKHIIDGRTVEAKKAVPRD---DQQVLKRHASP 95
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 97/136 (71%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+DR+TG+PRGFGFVT+ +P+ D V+ED H+I+G+Q++ K+++P+ K +K+F
Sbjct: 41 MRDRQTGRPRGFGFVTFTEPAAADAVVEDVHVIDGRQIDAKKSVPQ----EMKPKARKVF 96
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ ED+F+++F QFG+V E QIM+DH + RSRGFGF+TF + + + + A G
Sbjct: 97 VGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTM 156
Query: 121 LELAGAQVEVKKAEPK 136
+L G +VEVK A PK
Sbjct: 157 HDLGGKKVEVKPATPK 172
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+ K+F+GG+ E++ +D F ++G + E +MRD T R RGFGF+TF A D ++
Sbjct: 8 SAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVV 67
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ ++ G Q++ KK+ P++
Sbjct: 68 EDVHVID--GRQIDAKKSVPQE 87
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 135/252 (53%), Gaps = 33/252 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK---GAVGSKDF--- 54
+KDR TG+ RGFGFV +ADP+V + VI + H I+G+ VE K+ +P+ V +
Sbjct: 38 LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
+T+KIFVGG+PSSV E +FK +F QFG + +M DH+T R RGFGFIT+D
Sbjct: 98 QGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAY 155
+E+AV+ +L K EL G VEVK+A PK+ + P PS R NN Y
Sbjct: 158 SEEAVEKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNILNGY 215
Query: 156 GSGFGD-AYGGYG---GGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFG 211
GF A GGYG G F+ G G SG GY + + G G+ G F
Sbjct: 216 AQGFNPAAVGGYGLRMDGRFSPVGAGRSGFANFSSGYGMNVNF--EQGLPTGFTGGTNFN 273
Query: 212 GYGGYGGGMGAY 223
G YG GM Y
Sbjct: 274 GNVDYGRGMSPY 285
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRLVEAKKAVPR 83
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-----------GAV 49
M+DR TG+ RGFGF+ +ADP+V ++VI + H+I+G+ VE K+ +P+ A
Sbjct: 38 MRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSAH 97
Query: 50 GSK-DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
GS +TKKIFVGG+ S+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPSRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
AVD L K EL G VEVK+A PK+ + P PS R
Sbjct: 158 DAVDKALFKTFH-ELNGKMVEVKRAVPKELS-PGPSMR 193
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +++F ++G+V E IMRD +T R+RGFGFI F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHMID--GRMVEAKKAVPR 83
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 18/154 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGF+ +ADP V ++VI + HII+G+ VE K+ +P+ V +
Sbjct: 38 MRDRATGRARGFGFIVFADPCVSERVIMEKHIIDGRTVEAKKAVPRDDQQVLKRHASPIQ 97
Query: 55 -----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+TKKIFVGG+PSS+ E+EFK++F QFG + + +M DH+T R RGFGFI
Sbjct: 98 LMSPVHGGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFI 157
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
TFD++ AVD +L K EL G VEVK+A PK+
Sbjct: 158 TFDSDDAVDRVLHKTFH-ELNGKLVEVKRAVPKE 190
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +D+F +GDV E IMRD +T R+RGFGFI F + ++ +
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNP 151
+ ++ G VE KKA P+ Q +R+ +P
Sbjct: 67 KHIID--GRTVEAKKAVPRD---DQQVLKRHASP 95
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +ADP+V ++V D H+I+G+ VE K+ +P+ ++ SK
Sbjct: 43 MRDRSTGRARGFGFVVFADPAVAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSI 102
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PS+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 103 GSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 162
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
AVD L K EL G VEVK+A PK+ + P P R
Sbjct: 163 DAVDKALHKSFH-ELNGKMVEVKRAVPKEQS-PGPVVR 198
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +D+F +FG+V E IMRD ST R+RGFGF+ F + AV + +
Sbjct: 12 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVF-ADPAVAERVTM 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 71 -DKHMIDGRMVEAKKAVPR 88
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-------------G 47
MKDR TG+ RGFGFV +ADP+V ++V+ + H+I+G+ VE K+ +P+
Sbjct: 38 MKDRATGRARGFGFVVFADPAVAERVVMEKHLIDGRNVEAKKAVPREDQNILNRNSSSSI 97
Query: 48 AVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
+TKKIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+
Sbjct: 98 HGSPSPARTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYN 149
E+AVD +L K EL G VEVK+A PK+ + P P+ + N
Sbjct: 158 EEAVDKVLHKTFH-ELNGKMVEVKRAVPKELS-PGPTRTQLN 197
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +++F FG+V E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VE KKA P++
Sbjct: 67 KHLID--GRNVEAKKAVPRE 84
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 28/193 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK---GAVGSKDF--- 54
+KDR TG+ RGFGFV +ADP+V + VI + H I+G+ VE K+ +P+ V +
Sbjct: 38 LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
+T+KIFVGG+PSSV E +FK +F QFG + +M DH+T R RGFGFIT+D
Sbjct: 98 QGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAY 155
+E+AV+ +L K EL G VEVK+A PK+ + P PS R NN Y
Sbjct: 158 SEEAVEKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGY 215
Query: 156 GSGFGD-AYGGYG 167
GF A GGYG
Sbjct: 216 AQGFNPAAVGGYG 228
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRLVEAKKAVPR 83
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +ADP+V ++V D H+I+G+ VE K+ +P+ ++ SK
Sbjct: 45 MRDRSTGRARGFGFVVFADPAVAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSI 104
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PS+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 105 GSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 164
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
AVD L K EL G VEVK+A PK+ + P P R
Sbjct: 165 DAVDKALHKSFH-ELNGKMVEVKRAVPKEQS-PGPVVR 200
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +D+F +FG+V E IMRD ST R+RGFGF+ F + AV + +
Sbjct: 14 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVF-ADPAVAERVTM 72
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 73 -DKHMIDGRMVEAKKAVPR 90
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 28/193 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK---GAVGSKDF--- 54
+KDR TG+ RGFGFV +ADP+V + VI + H I+G+ VE K+ +P+ V +
Sbjct: 38 LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
+T+KIFVGG+PSSV E +FK +F QFG + +M DH+T R RGFGFIT+D
Sbjct: 98 QGSPSGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAY 155
+E+AV+ +L K EL G VEVK+A PK+ + P PS R NN Y
Sbjct: 158 SEEAVEKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGY 215
Query: 156 GSGFGD-AYGGYG 167
GF A GGYG
Sbjct: 216 AQGFNPAAVGGYG 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRLVEAKKAVPR 83
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 28/193 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK---GAVGSKDF--- 54
+KDR TG+ RGFGFV +ADP+V + VI + H I+G+ VE K+ +P+ V +
Sbjct: 38 LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
+T+KIFVGG+PSSV E +FK +F QFG + +M DH+T R RGFGFIT+D
Sbjct: 98 QGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAY 155
+E+AV+ +L K EL G VEVK+A PK+ + P PS R NN Y
Sbjct: 158 SEEAVEKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGY 215
Query: 156 GSGFGD-AYGGYG 167
GF A GGYG
Sbjct: 216 AQGFNPAAVGGYG 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRLVEAKKAVPR 83
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 28/193 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK---GAVGSKDF--- 54
+KDR TG+ RGFGFV +ADP+V + VI + H I+G+ VE K+ +P+ V +
Sbjct: 38 LKDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSI 97
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
+T+KIFVGG+PSSV E +FK +F QFG + +M DH+T R RGFGFIT+D
Sbjct: 98 QGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYD 157
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAY 155
+E+AV+ +L K EL G VEVK+A PK+ + P PS R NN Y
Sbjct: 158 SEEAVEKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGY 215
Query: 156 GSGFGD-AYGGYG 167
GF A GGYG
Sbjct: 216 AQGFNPAAVGGYG 228
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRLVEAKKAVPR 83
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 103/156 (66%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADP+V ++V+ D H+I+G+ VE K+ +P+ +
Sbjct: 38 MRDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AV+ +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EAVERVLHKTFH-ELNGKMVEVKRAVPKE-HSPGPS 191
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED K++F +G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRTVEAKKAVPR 83
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-----------GAV 49
M+DR TG+ RGFGF+ +ADP+V ++VI + H+I+G+ VE K+ +P+ A
Sbjct: 38 MRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAH 97
Query: 50 GSK-DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
GS +TKKIFVGG+ S+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPSRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
AVD L K EL G VEVK+A PK+ + P PS R
Sbjct: 158 DAVDKALFKTFH-ELNGKMVEVKRAVPKELS-PGPSMR 193
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +++F ++G+V E IMRD +T R+RGFGFI F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHMID--GRMVEAKKAVPR 83
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 103/156 (66%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADP+V ++V+ D H+I+G+ VE K+ +P+ +
Sbjct: 38 MRDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AV+ +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EAVERVLHKTFH-ELNGKMVEVKRAVPKE-HSPGPS 191
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED K++F +G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRTVEAKKAVPR 83
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 100/149 (67%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
MKDR TG+ RGFGFV +ADP+V ++V+ + H+I+G+ VE K+ +P+ + +
Sbjct: 38 MKDRATGRARGFGFVVFADPAVAERVVMEKHLIDGRNVEAKKAVPREDQNTLNKNSSSVN 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPARTKKIFVGGLASTVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 158 EAVDRVLHKTFH-ELNGKMVEVKRAVPKE 185
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED K++F FG+V E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VE KKA P++
Sbjct: 67 KHLID--GRNVEAKKAVPRE 84
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 28/201 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFK----- 55
M+D+ TG+ RGFGF+ +++P+ VD+V++D H I+G+QVE+KR +P+ K
Sbjct: 38 MRDKMTGRARGFGFIGFSEPTAVDRVLQDKHTIDGRQVELKRAVPREEHQRNAQKSGSNV 97
Query: 56 -----TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
TKKIFVGG+ +V ED+FK +F QFG + + +M DH + R RGFGFITFD+E+A
Sbjct: 98 GAGPRTKKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEA 157
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKK-----------PNLP--QPSYRRYNNPKPAYGS 157
VD ++ K N EL VEVK+A PK+ P P P RY P+P G
Sbjct: 158 VDKVVMK-NFHELHDKTVEVKRALPKEMSPGSARARSSPAGPYGNPQNSRYGAPQPPAGR 216
Query: 158 G----FGDAYGGYGGGGFAGG 174
G +G G + GG+ G
Sbjct: 217 GGYPPYGAVQGYFPAGGYVTG 237
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D + K+F+GGI E+ K++F +GDV E IMRD T R+RGFGFI F AVD
Sbjct: 2 DTEQGKVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVD 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+L +K + G QVE+K+A P++
Sbjct: 62 RVLQ--DKHTIDGRQVELKRAVPRE 84
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV + DP+V D V+++ H I+G+ VE K+ +P+ V S+
Sbjct: 21 MKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIH 80
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 81 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 140
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 141 EAVDQVLLKTFH-ELNGKMVEVKRAVPKE 168
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 70 EDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE 129
+D +++F +G+V+E IM+D +T R+RGFGF+ F + AV D++ + K + G VE
Sbjct: 2 KDGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVADIVVQ-EKHNIDGRMVE 59
Query: 130 VKKAEPK 136
KKA P+
Sbjct: 60 AKKAVPR 66
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 106/157 (67%), Gaps = 15/157 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV ++DPS+ ++VI++ H I+G+ VE K+ +P+ + S++
Sbjct: 38 MKDRTTGRARGFGFVVFSDPSIAERVIKEKHSIDGRMVEAKKAVPRDDQNMLSRNSGGSI 97
Query: 55 -------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
+TKKIFVGG+ S+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+
Sbjct: 98 HGSPGPGRTKKIFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
E+AVD +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EEAVDKVLMKTFH-ELNGKMVEVKRAVPKELS-PGPS 192
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ KD+F FG+V E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 67 --KHSIDGRMVEAKKAVPR 83
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 25/190 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD +V ++VI + H+I+G+ VE K+ +P+ + S+
Sbjct: 38 MRDRATGRARGFGFVVFADLTVAERVIMEKHVIDGRTVEAKKAVPRDDQHILSRSISNIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E+EFK +F Q+G + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGSG 158
+AVD +L K EL G VEVK+A PK+ + P PS R NN +Y G
Sbjct: 158 EAVDRVLHKTFH-ELNGKMVEVKRAVPKELS-PGPSRSPLMGYNHGLTRANNFLNSYAQG 215
Query: 159 FG-DAYGGYG 167
+ + GG+G
Sbjct: 216 YNMSSVGGFG 225
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ K++F ++G+V E IMRD +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHVID--GRTVEAKKAVPR 83
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV ++DP+V + VI++ H I+G+ VE K+ +P+ + S++
Sbjct: 38 MKDRTTGRARGFGFVVFSDPAVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AVD +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EAVDKVLLK-TFHELNGKMVEVKRAVPKELS-PGPS 191
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ +++F +G+V E IM+D +T R+RGFGF+ F ++ AV +++ K
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVF-SDPAVAEIVIK 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRMVEAKKAVPR 83
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV + DP+V D V+++ H I+G+ VE K+ +P+ V S+
Sbjct: 38 MKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+AVD +L K EL G VEVK+A PK+
Sbjct: 158 EAVDQVLLKTFH-ELNGKMVEVKRAVPKE 185
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ +++F +G+V+E IM+D +T R+RGFGF+ F + AV D++ +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVADIVVQ 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRMVEAKKAVPR 83
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 18/156 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ T +PRGFGFV ++DPSV+D+V++D H I+GK VE KR + + +
Sbjct: 38 MRDKITSRPRGFGFVVFSDPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG 97
Query: 53 ---------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ +TKKIFVGG+P ++ E+ FK++F +G V + +M D +T R RGFGFI
Sbjct: 98 RNSGGSGGGNMRTKKIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFI 157
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
+FDTE+AVD +L K +L G QVEVK+A PK N
Sbjct: 158 SFDTEEAVDRVLHK-TFHDLNGKQVEVKRALPKDAN 192
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED+ KD+F +G+V +MRD TSR RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + G VE K+A ++
Sbjct: 66 -DKHTIDGKTVEAKRALSRE 84
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 99/152 (65%), Gaps = 17/152 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
MKDR TG+ RGFGFV ++DPS+VD +++ H I+G+ VE K+ +P+ +
Sbjct: 38 MKDRLTGRARGFGFVVFSDPSIVDIALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNN 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+TKKIFVGG+P+++ E++FK++F QFG++ + +M DH+T R RGFGFI+
Sbjct: 98 DSQGYGGGSVRTKKIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFIS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
FD+E AV+ +L K +L VEVK+A PK
Sbjct: 158 FDSEDAVESVLQKSFH-QLNEKLVEVKRALPK 188
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D KIF+GGI +E+ +D+F ++G+V + IM+D T R+RGFGF+ F VD
Sbjct: 2 DSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVD 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
+A K + G VE KKA P+
Sbjct: 62 --IALQEKHTIDGRAVEAKKAVPR 83
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 26 VIEDTHIINGKQVEIKRTIPKGAVGSKD-FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQ 84
V+ED H I+G+ VE+KRT+P+ + +KD KT+KIFVGGIP+S+ E + K+ F +G V+
Sbjct: 84 VLEDEHTIDGRTVEVKRTVPREEMSTKDGPKTRKIFVGGIPTSLTEGKLKEHFSSYGKVE 143
Query: 85 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKP 138
EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G QVE+K+AEPKKP
Sbjct: 144 EHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPKKP 197
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED--THIINGKQVEIKRTIPK 46
M D TG+ RGFGFVT+ V++V+ + H + GKQVEIKR PK
Sbjct: 148 MVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPK 195
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 97/149 (65%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGFV +ADP V ++VI D H+I+G+ VE K+ +PK +
Sbjct: 38 MRDRTTGRARGFGFVVFADPGVAERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E +F+ +F QFG + + +M DHST R RGFGFIT+D+E
Sbjct: 98 GSPSSGRTKKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+ VD +L K EL G VEVK+A PK+
Sbjct: 158 ECVDRVLHKTFH-ELNGKMVEVKRAIPKE 185
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F +G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVIL- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA PK
Sbjct: 66 -DKHVIDGRTVEAKKAVPK 83
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI---------------- 44
M+D+ TG+PRGFGFV +ADP+++D+V++D H I+G+ VE K+ +
Sbjct: 38 MRDKTTGRPRGFGFVVFADPNILDRVLQDKHTIDGRTVEAKKALSREEQQTNARSGNLNP 97
Query: 45 PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
P+ + + +TKKIFVGG+P ++ +DEF+ +F +G V + IM D +T R RGFGFI+
Sbjct: 98 PRNSGSGGNIRTKKIFVGGLPPALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFIS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FD E AVD +L K +L G QVEVK+A PK N
Sbjct: 158 FDNEDAVDRVLHK-TFHDLNGKQVEVKRALPKDAN 191
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI ED+ KD+F+Q+GDV + +MRD +T R RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
+K + G VE KKA ++ Q + R N P SG G
Sbjct: 66 -DKHTIDGRTVEAKKALSRE---EQQTNARSGNLNPPRNSGSG 104
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 19/157 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG----AVGSK---- 52
M+++ TG+PRGFGFV +ADP+++D+V+ED H+I+G+ V+ K+ + +V S+
Sbjct: 38 MREKNTGKPRGFGFVVFADPNILDRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNS 97
Query: 53 ----------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
+ +TKKIFVGG+P ++ E++F+ +F +G V + +M D +T R RGFGF
Sbjct: 98 NSGMNSENGGNIRTKKIFVGGLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGF 157
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
I+FDTE+AVD +L K +L G QVEVK+A PK N
Sbjct: 158 ISFDTEEAVDRVLHKSFH-DLNGKQVEVKRALPKDAN 193
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI ED+ K+ F +GDV +MR+ +T + RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE- 65
Query: 118 GNKLELAGAQVEVKKA 133
+K + G V+ KKA
Sbjct: 66 -DKHVIDGRTVDAKKA 80
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 105/156 (67%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
MKDR TG+ RGFGFV ++DP++ + VI++ H I+G+ VE K+ +P+ + S++
Sbjct: 38 MKDRTTGRARGFGFVVFSDPAIAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+AVD +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EAVDKVLLKTFH-ELNGKMVEVKRAVPKELS-PGPS 191
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ +++F +G+V E IM+D +T R+RGFGF+ F ++ A+ +++ K
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVF-SDPAIAEIVIK 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 66 -EKHNIDGRMVEAKKAVPR 83
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ TG+PRGFGFV +ADPSV+D V+++ H I+G+ VE KR + + +
Sbjct: 38 MRDKTTGRPRGFGFVVFADPSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTG 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+FKTKKIFVGG+PS++ E+ F+ +F +G V + +M D +T R RGFGFI+
Sbjct: 98 RSSSGMGGNFKTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFIS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L K +L G VEVK+A PK N
Sbjct: 158 FDTEDAVDRVLHK-TFHDLNGKLVEVKRALPKDAN 191
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGIP E++ K++F Q+GDV + IMRD +T R RGFGF+ F +D +L +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 118 GNKLELAGAQVEVKKA 133
K + G VE K+A
Sbjct: 67 --KHTIDGRTVEAKRA 80
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 157/304 (51%), Gaps = 38/304 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD + ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIG 97
Query: 55 -----KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 SPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSED 157
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGG 169
AVD L K N EL G VEVK+A PK+ + P P R PA G + +
Sbjct: 158 AVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPIAR-----SPAGGQNYAMSRVHNFLN 210
Query: 170 GFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYG---GYGGGMGAYRGE 226
GF G + GG G R G YG+ G G+ G GYG GGM AY G
Sbjct: 211 GFNQ---GYNPNPLGGYGMRVDGRYGLLTGARNGFSSFGP--GYGMGMNAEGGMSAYFGA 265
Query: 227 PSSLGYS--GRYGG--FNRGYDVTGD---YGGLNESYGGYGGS---GVGGGG--GYGGGP 274
S S GR G FN + G Y GLN+ G S V G G Y G P
Sbjct: 266 SSGFANSSNGRQIGSYFNSSSNRLGSPIGYVGLNDDSGSILSSMSRNVWGNGNLNYTGNP 325
Query: 275 SGYD 278
+ +
Sbjct: 326 TNTN 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED + +F +FG+V E IMRD +T R+RGFGF+ F + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTL- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 104/157 (66%), Gaps = 19/157 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG----AVGSK---- 52
M+++ TG+PRGFGFV +ADP+++D+V+ED H+I+G+ V+ K+ + +V S+
Sbjct: 38 MREKNTGKPRGFGFVVFADPNILDRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNS 97
Query: 53 ----------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
+ +TKKIFVGG+P ++ E++F+ +F +G+V + +M D +T R RGFGF
Sbjct: 98 NSGMNSGNGGNIRTKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGF 157
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
I+FDTE AVD +L K +L G QVEVK+A PK N
Sbjct: 158 ISFDTEDAVDRVLHKSFH-DLNGKQVEVKRALPKDAN 193
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI ED+ K+ F +GDV +MR+ +T + RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE- 65
Query: 118 GNKLELAGAQVEVKKA 133
+K + G V+ KKA
Sbjct: 66 -DKHVIDGRTVDAKKA 80
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 157/304 (51%), Gaps = 38/304 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD + ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIG 97
Query: 55 -----KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 SPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSED 157
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGG 169
AVD L K N EL G VEVK+A PK+ + P P R PA G + +
Sbjct: 158 AVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPIAR-----SPAGGQNYAMSRVHNFLN 210
Query: 170 GFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYG---GYGGGMGAYRGE 226
GF G + GG G R G YG+ G G+ G GYG GGM AY G
Sbjct: 211 GFNQ---GYNPNPLGGYGMRVDGRYGLLTGARNGFSSFGP--GYGMGMNAEGGMSAYFGA 265
Query: 227 PSSLGYS--GRYGG--FNRGYDVTGD---YGGLNESYGGYGGS---GVGGGG--GYGGGP 274
S S GR G FN + G Y GLN+ G S V G G Y G P
Sbjct: 266 SSGFANSSNGRQIGSYFNSSSNRLGSPIGYVGLNDDSGSILSSMSRNVWGNGNLNYTGNP 325
Query: 275 SGYD 278
+ +
Sbjct: 326 TNTN 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED + +F +FG+V E IMRD +T R+RGFGF+ F + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTL- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 100/159 (62%), Gaps = 15/159 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKDF 54
MKDR TG+ RGFGFV +ADP+V ++V+ + H I+G+ VE K+ +P+ S
Sbjct: 38 MKDRTTGRARGFGFVVFADPAVTERVVTEKHTIDGRMVEAKKAVPRDDHQFLNKNSSSSI 97
Query: 55 K-------TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
TKKIFVGG+ S++ E +FK +F QFG + + +M DH+T R RGFGFIT+D+
Sbjct: 98 HGSPVPGHTKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
E AVD +L EL G VEVK+A PK+P+ P P R
Sbjct: 158 EDAVDKVLLNAFH-ELNGKMVEVKRAVPKEPS-PGPIMR 194
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED + +F FG+V E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHTID--GRMVEAKKAVPR 83
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 130/233 (55%), Gaps = 26/233 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD + ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQSIASKNNSSIG 97
Query: 55 -----KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 SPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSED 157
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGG 169
AVD L K N EL G VEVK+A PK+ + P P R PA G + +
Sbjct: 158 AVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPIAR-----SPAGGQNYAMSRVHNFLN 210
Query: 170 GFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGA 222
GF G + GG G R G YG+ G G+ G GYG GM A
Sbjct: 211 GFNQ---GYNPNPLGGYGMRVDGRYGLLTGARNGFSSFGP-----GYGMGMNA 255
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED + +F +FG+V E IMRD +T R+RGFGF+ F + +
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTL- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 149/298 (50%), Gaps = 43/298 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
M+DR TG+ RGFGF+ +A+ V ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFIVFAEAGVAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSI 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K N EL G VEVK+A PK+ + P P R PA G +
Sbjct: 158 DAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPVAR-----SPAGGQNLAISRVHNFL 210
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GF G + GG G R G +G+ G G+ G YG GM G +
Sbjct: 211 NGFNQ---GYNPNPIGGYGMRVDGRFGLLSGARNGFSSFGP-----SYGMGMNVETGMNA 262
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYG 286
+ G + + LN S G GS GG G P GY +GL G
Sbjct: 263 NFGANSSF---------------LNNSNGRQMGSYYNGGSNRLGSPIGY-VGLNDDSG 304
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +D+F +FG+V E IMRD +T R+RGFGFI F E V + +
Sbjct: 7 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVF-AEAGVAERVTM 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 127/235 (54%), Gaps = 28/235 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD +V ++V D H I+G+ VE K+ +P+ ++ SK
Sbjct: 39 MRDRSTGRARGFGFVVFADAAVAERVTMDKHTIDGRMVEAKKAVPRDDHSIVSKSNGSST 98
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PSSV E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 99 GSPGPGRTRKIFVGGLPSSVTEADFRRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSE 158
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K EL G VEVK+A PK+ + P P R P G G Y
Sbjct: 159 DAVDKALHKSFH-ELNGKMVEVKRAVPKEQS-PGPVVR-----SPV---GVGQNYATNRV 208
Query: 169 GGFAGG-GFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGA 222
F G G + GG G R G YG+ G G+ G GYG GM
Sbjct: 209 HSFLNGFNQGYNPNPIGGYGMRVDGRYGLLSGARNGFSSFGP-----GYGMGMNV 258
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD ST R+RGFGF+ F + AV + +
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVF-ADAAVAERVTM 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 67 -DKHTIDGRMVEAKKAVPR 84
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 149/298 (50%), Gaps = 43/298 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
M+DR TG+ RGFGF+ +A+ V ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 61 MRDRNTGRARGFGFIVFAEAGVAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSI 120
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 121 GSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSE 180
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K N EL G VEVK+A PK+ + P P R PA G +
Sbjct: 181 DAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPVAR-----SPAGGQNLAISRVHNFL 233
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GF G + GG G R G +G+ G G+ G YG GM G +
Sbjct: 234 NGFNQ---GYNPNPIGGYGMRVDGRFGLLSGARNGFSSFGP-----SYGMGMNVETGMNA 285
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYG 286
+ G + + LN S G GS GG G P GY +GL G
Sbjct: 286 NFGANSSF---------------LNNSNGRQMGSYYNGGSNRLGSPIGY-VGLNDDSG 327
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +D+F +FG+V E IMRD +T R+RGFGFI F E V + +
Sbjct: 30 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVF-AEAGVAERVTM 88
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 89 -DKHMIDGRMVEAKKAVPR 106
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 20/155 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIP--KGAVGSKDFKT-- 56
MKD+ +GQPRGFGFVT+AD +V+D+V+E++H I+G+ VE+KR IP K A G D ++
Sbjct: 134 MKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSG 193
Query: 57 --------------KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
KK+FVGG+P SV E +F+ +F +FG + + +M D T RSRGFGF
Sbjct: 194 AHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGF 253
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+TF+ E AV ++++K + EL G VE+K+AEPK+
Sbjct: 254 VTFEEEGAVAEVISKTH--ELHGKVVEIKRAEPKE 286
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ +D F ++G + + +M+D + + RGFGF+TF +D +L +
Sbjct: 103 KLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEE 162
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
+ ++ G VEVK+A P+ PS
Sbjct: 163 SHTID--GRTVEVKRAIPRDKTASGPS 187
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 165/341 (48%), Gaps = 52/341 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
MKDR TG+ RGFGFV +ADP+V ++V+ HII+GK VE K+ +P+ V +K
Sbjct: 38 MKDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQ 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+KKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI++D+E
Sbjct: 98 GSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
+AVD +L K EL G VEVK A PK ++ + R N ++G+ +
Sbjct: 158 EAVDKVLQKTFH-ELNGKMVEVKLAVPK--DMALNTMRNQMNVN-SFGTSRISSLLNEYT 213
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG--GYG-GYGVGGEF--GGYGGYGGGMGAY 223
GF+ G G R S A G RGG +G GYG+ F YG G
Sbjct: 214 QGFSPSPISGYGVKPE---VRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG 270
Query: 224 RGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLG- 282
G P S GY+ G F G ES GG+ VG G P + G G
Sbjct: 271 FGRPFSPGYAASLGRF----------GSQMES----GGASVGNGSVLNAAPKNHLWGNGG 316
Query: 283 -----------SSYGGSSGGAFFGSRGGYGGAGGSSR--YH 310
SS+ G+SG + GS G G +R YH
Sbjct: 317 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTAARARSSYH 357
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ ++ K+F+GGI +ED +D+F FG+V E IM+D +T R+RGFGF+ F +
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVLLKHIID--GKIVEAKKAVPR 83
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 165/341 (48%), Gaps = 52/341 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
MKDR TG+ RGFGFV +ADP+V ++V+ HII+GK VE K+ +P+ V +K
Sbjct: 38 MKDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQ 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+KKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI++D+E
Sbjct: 98 GSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
+AVD +L K EL G VEVK A PK ++ + R N ++G+ +
Sbjct: 158 EAVDKVLQKTFH-ELNGKMVEVKLAVPK--DMALNTMRNQMNVN-SFGTSRISSLLNEYT 213
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG--GYG-GYGVGGEF--GGYGGYGGGMGAY 223
GF+ G G R S A G RGG +G GYG+ F YG G
Sbjct: 214 QGFSPSPISGYGVKPE---VRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG 270
Query: 224 RGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLG- 282
G P S GY+ G F G ES GG+ VG G P + G G
Sbjct: 271 FGRPFSPGYAASLGRF----------GSQMES----GGASVGNGSVLNAAPKNHLWGNGG 316
Query: 283 -----------SSYGGSSGGAFFGSRGGYGGAGGSSR--YH 310
SS+ G+SG + GS G G +R YH
Sbjct: 317 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYH 357
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ ++ K+F+GGI +ED +D+F FG+V E IM+D +T R+RGFGF+ F +
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVLLKHIID--GKIVEAKKAVPR 83
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ TG+PRGFGFV +ADPS++D+V+++ HII+G+ VE KR + + +
Sbjct: 38 MRDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNS 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ KTKKIFVGG+P +++E+ F+ +F FG V + +M D ST R RGFGF++
Sbjct: 98 ARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L K +L G QVEVK+A PK N
Sbjct: 158 FDTEDAVDRVLYKTFH-DLNGKQVEVKRALPKDAN 191
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED+ K++F +G+V + +MRD +T R RGFGF+ F +D +L +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ G VE K+A ++
Sbjct: 67 KHIID--GRTVEAKRALSRE 84
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 151/298 (50%), Gaps = 43/298 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV + D V ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFTDAGVAERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSI 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K N EL G VEVK+A PK+ + P P+ R PA G + +
Sbjct: 158 DAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPAAR-----SPAGGQNYAMSRVHSFL 210
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GF G + GG G R G YG+ G G+ G GYG GM + G +
Sbjct: 211 NGFNQ---GYNPNPIGGYGMRVDGRYGLLTGARNGFSSFGP-----GYGMGMNSESGMNA 262
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYG 286
+ G + + +N S G GS G G P GY +GL G
Sbjct: 263 NFGANSSF---------------VNNSNGRQIGSFYNGSSNRLGSPIGY-VGLNDDSG 304
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD +T R+RGFGF+ F T+ V + +
Sbjct: 7 KLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVF-TDAGVAERVTM 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 165/333 (49%), Gaps = 36/333 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
MKDR TG+ RGFGFV +ADP V ++V+ HII+GK VE K+ +P+ AV +K
Sbjct: 38 MKDRATGRARGFGFVVFADPIVAERVVLLKHIIDGKIVEAKKAVPRDDHAVFNKSNSSLQ 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
TKKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI++D+E
Sbjct: 98 GSPGPSTTKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD +L K EL G VEVK A PK+ L + R N ++GS
Sbjct: 158 DAVDKVLQKTFH-ELNGKMVEVKLAVPKEMALN--TMRNQMNVN-SFGSSRISTLLNEYT 213
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG--GYG-GYGVGGEF--GGYGGYGGGMGAY 223
GF+ G G R S A G RGG +G GYG+ F YG G
Sbjct: 214 QGFSPSPISGYGVKPE---VRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG 270
Query: 224 RGEPSSLGYS---GRYGG-FNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDI 279
G P S GY+ GRYG G G+ LN + + G GG G P
Sbjct: 271 FGRPFSPGYAASLGRYGSQMETGGASVGNSSVLNAATKNHLW-GNGGLGYMSNSPISR-- 327
Query: 280 GLGSSYGGSSGGAFFGSRGGYGG--AGGSSRYH 310
SS+ G+SG + GS G G A G S YH
Sbjct: 328 ---SSFSGNSGTSSLGSIGDNWGTAARGRSSYH 357
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ ++ K+F+GGI +ED +++F FG+V E IM+D +T R+RGFGF+ F +
Sbjct: 2 EMESCKLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVLLKHIID--GKIVEAKKAVPR 83
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 15/157 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG-------AVGSKD 53
MKDR TG+ RGFGFV +AD +V ++VI + H I+G+ VE K+ +P+ + GS
Sbjct: 38 MKDRTTGRARGFGFVVFADAAVAERVIMEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSI 97
Query: 54 F------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
+T+KIFVGG+ S+V E +F+ +F Q+G + + +M DH+T R RGFGFIT+D+
Sbjct: 98 HGSPGPGRTRKIFVGGLASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDS 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
E+AVD +L K EL G VEVK+A PK+ + P PS
Sbjct: 158 EEAVDKVLMKTFH-ELNGKMVEVKRAVPKELS-PGPS 192
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NE+ K++F FG+V E IM+D +T R+RGFGF+ F + ++ +
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
K + G VE KKA P+
Sbjct: 67 --KHNIDGRMVEAKKAVPR 83
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 151/298 (50%), Gaps = 43/298 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV + D V ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFTDAGVAERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSI 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K N EL G VEVK+A PK+ + P P+ R PA G + +
Sbjct: 158 DAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPAAR-----SPAGGQNYAMSRVHSFL 210
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 228
GF G + GG G R G YG+ G G+ G GYG GM + G +
Sbjct: 211 NGFNQ---GYNPNPIGGYGMRVDGRYGLLTGARNGFSSFGP-----GYGMGMNSESGMNA 262
Query: 229 SLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYG 286
+ G + + +N S G GS G G P GY +GL G
Sbjct: 263 NFGANSSF---------------VNNSNGRQIGSFYNGSSNRLGSPIGY-VGLNDDSG 304
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD +T R+RGFGF+ F T+ V + +
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVF-TDAGVAERVTM 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 18/156 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ T +PRGFGFV ++DPSV+D+V++D H I+GK VE KR + + +
Sbjct: 38 MRDKITSRPRGFGFVVFSDPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNG 97
Query: 53 ---------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ +TKK FVGG+P ++ E+ FK++F +G V + +M D +T R RGFGFI
Sbjct: 98 RNSGGSGGGNMRTKKXFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFI 157
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
+FDTE+AVD +L K +L G QVEVK+A PK N
Sbjct: 158 SFDTEEAVDRVLHK-TFHDLNGKQVEVKRALPKDAN 192
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED+ KD+F +G+V +MRD TSR RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + G VE K+A ++
Sbjct: 66 -DKHTIDGKTVEAKRALSRE 84
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 165/341 (48%), Gaps = 52/341 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
MKDR TG+ RGFGFV +ADP+V ++V+ HII+GK VE K+ +P+ V +K
Sbjct: 38 MKDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQ 97
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+KKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI++D+E
Sbjct: 98 GSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
+AVD +L K EL G VEVK A PK ++ + R N ++G+ +
Sbjct: 158 EAVDKVLQKTFH-ELNGKMVEVKLAVPK--DMALNTMRNQMNVN-SFGTSRISSLLNEYT 213
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG--GYG-GYGVGGEF--GGYGGYGGGMGAY 223
GF+ G G R S A G RGG +G GYG+ F YG G
Sbjct: 214 QGFSPSPISGYGVKPE---VRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGG 270
Query: 224 RGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLG- 282
G P S GY+ G F G ES GG+ VG G P + G G
Sbjct: 271 FGRPFSPGYAASLGRF----------GSQMES----GGASVGNGSVLNAAPKNHLWGNGG 316
Query: 283 -----------SSYGGSSGGAFFGSRGGYGGAGGSSR--YH 310
SS+ G+SG + GS G G +R YH
Sbjct: 317 LGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARSSYH 357
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ ++ K+F+GGI +ED +D+F FG+V E IM+D +T R+RGFGF+ F +
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVLLKHIID--GKIVEAKKAVPR 83
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD + ++V D H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFADSGIAERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSI 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
AVD L K N EL G VEVK+A PK+
Sbjct: 158 DAVDKALHK-NFHELNGKMVEVKRAVPKE 185
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD +T R+RGFGF+ F + +
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRMVEAKKAVPR 83
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 96/136 (70%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFGFV +ADP V D+V++D H INGK VE K+ +P+ + + KIF
Sbjct: 38 MKDRTTGRGRGFGFVVFADPDVADRVVQDKHSINGKLVEAKKAVPRD-----EHQNAKIF 92
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +V+E+EFK +F QFG++ + +M DH+T R RGFGFITFD+E+AVD +L K
Sbjct: 93 VGGLAPNVSEEEFKQYFEQFGNITDIVVMYDHATQRPRGFGFITFDSEEAVDSVLQKTFH 152
Query: 121 LELAGAQVEVKKAEPK 136
EL VEVK+A PK
Sbjct: 153 -ELKDKMVEVKRAVPK 167
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ +++ K++F +GDV E IM+D +T R RGFGF+ F D ++
Sbjct: 7 KIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRVVQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKK-------------PNLPQPSYRRY 148
+K + G VE KKA P+ PN+ + +++Y
Sbjct: 66 -DKHSINGKLVEAKKAVPRDEHQNAKIFVGGLAPNVSEEEFKQY 108
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 22/160 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKD- 53
M+D+ TG+PRGFGFV YADP+ VD + + H ++G+ V++KR + + AV
Sbjct: 38 MRDKLTGRPRGFGFVVYADPAAVDAALLEPHTLDGRTVDVKRALSREEQQASKAVNPSTG 97
Query: 54 --------------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
+TKKIFVGG+PSS+ +DEF+ +F FG V + +M D +T R RG
Sbjct: 98 RNTGGGGGGNDASGTRTKKIFVGGLPSSLTDDEFRQYFQTFGAVTDVVVMYDQTTQRPRG 157
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FGFITFD+E AVD +L K +L G VEVK+A P++ N
Sbjct: 158 FGFITFDSEDAVDRVLHK-TFHDLGGKMVEVKRALPREAN 196
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ + F FG+V + +MRD T R RGFGF+ + AVD L +
Sbjct: 7 KLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLE 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 12/148 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD + ++V + H+I+G+ VE K+ +P+ ++ SK+
Sbjct: 38 MRDRNTGRARGFGFVVFADSGIAERVTMEKHMIDGRMVEAKKAVPRDDQSIASKNNSSIG 97
Query: 55 -----KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
+T+KIFVGG+ S+V E EF+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 SPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSED 157
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKK 137
AVD L K N EL G VEVK+A PK+
Sbjct: 158 AVDKALHK-NFHELNGKMVEVKRAVPKE 184
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FGDV E IMRD +T R+RGFGF+ F + + +
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTME 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 67 KHMID--GRMVEAKKAVPR 83
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 22/160 (13%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+D+ TG+PRGFGFV +ADP+VVD+ ++D H ++G+ V++KR + + +
Sbjct: 38 MRDKTTGRPRGFGFVVFADPAVVDRALQDPHTLDGRTVDVKRALSREEQQASKAANPSGG 97
Query: 55 ---------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
+TKKIFVGG+PS++ ED F+ +F FG V + +M D +T R RG
Sbjct: 98 RNTGGGNGGGDANGARTKKIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRG 157
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FGFITFD+E AVD +L K +L G VEVK+A P++ N
Sbjct: 158 FGFITFDSEDAVDHVLQK-TFHDLGGKLVEVKRALPREAN 196
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ + F +G+V + +MRD +T R RGFGF+ F VD L
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRALQD 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 129/235 (54%), Gaps = 28/235 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD +V ++V + H+I+G+ VE K+ +P+ ++ +K
Sbjct: 39 MRDRSTGRARGFGFVVFADAAVAERVTTEKHMIDGRMVEAKKAVPRDDHSIVTKSNASSI 98
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PS+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 99 GSPGPGRTRKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 158
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
AVD L K EL G VEVK+A PK+ + P P+ R P G G Y
Sbjct: 159 DAVDKALHKSFH-ELNGKMVEVKRAVPKEQS-PGPAAR-----SPV---GVGQNYAMNRV 208
Query: 169 GGFAGG-GFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGA 222
F G G + GG G R G YG+ G G+ G GYG GM
Sbjct: 209 HSFLNGFNQGYNPNPIGGYGIRVDGRYGLISGARNGFSSFGP-----GYGMGMNV 258
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD ST R+RGFGF+ F + + +
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTE 67
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 68 KHMID--GRMVEAKKAVPR 84
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD +V ++V + H+I+G+ VE K+ +P+ ++ SK
Sbjct: 40 MRDRSTGRARGFGFVVFADATVAERVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSI 99
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PS+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 100 GSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 159
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
AVD L K EL G VEVKKA PK+
Sbjct: 160 DAVDKALHKSFH-ELNGKMVEVKKAVPKE 187
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD ST R+RGFGF+ F + + +
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 69 KHMID--GRMVEAKKAVPR 85
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 131/241 (54%), Gaps = 35/241 (14%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +ADP+V ++V+ D H+I+G+ VE K+ +P+ + +++
Sbjct: 38 MRDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+TKKIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 98 GSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG 168
+AV+ +L K EL G VEVK+A PK+ ++P P+ G YG
Sbjct: 158 EAVERVLHKTFH-ELNGKMVEVKRAVPKE-----------HSPGPSRSPLVGYNYGLGRN 205
Query: 169 GGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFG----GYGGYGGGMGAYR 224
F G G S G+YG+R G G G G GYG GM +
Sbjct: 206 NNFL-------NNYGQGYNMSSVGSYGIRMDGRFNPVASGRSGFPPFGAPGYGMGMNLEQ 258
Query: 225 G 225
G
Sbjct: 259 G 259
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED K++F +G+V E IMRD +T R+RGFGF+ F + ++
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM- 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+K + G VE KKA P+
Sbjct: 66 -DKHMIDGRTVEAKKAVPR 83
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDF---- 54
M+DR TG+ RGFGFV +AD +V ++V + H+I+G+ VE K+ +P+ ++ SK
Sbjct: 40 MRDRSTGRARGFGFVVFADATVAERVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSI 99
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+T+KIFVGG+PS+V E +F+ +F QFG + + +M DH+T R RGFGFIT+D+E
Sbjct: 100 GSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSE 159
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
AVD L K EL G VEVKKA PK+
Sbjct: 160 DAVDKALHKSFH-ELNGKMVEVKKAVPKE 187
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED +++F +FG+V E IMRD ST R+RGFGF+ F + + +
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 69 KHMID--GRMVEAKKAVPR 85
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 136/262 (51%), Gaps = 32/262 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKDFKT-- 56
MKDR TG+ RGFGF+ ++DP V ++V+ H+I+GK VE K+ +P+ V +K + T
Sbjct: 38 MKDRATGRARGFGFLVFSDPIVAERVVFLRHVIDGKLVEAKKAVPRDDHVVLNKSYNTSL 97
Query: 57 ---------KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 107
KKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI+F++
Sbjct: 98 QGSPGPANSKKIFVGGLASSVTEAEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFES 157
Query: 108 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYG 167
E AVD +L + EL G VEVK A PK+ L P + N + FG +
Sbjct: 158 EDAVDKVLQRTFH-ELNGKMVEVKLAVPKEMAL-NPIRNQMN------VNSFGSSRISAL 209
Query: 168 GGGFAGGGFGGS--GGGGGGGGYRSSGAYGVRGGGYG----GYGVGGEF--GGYGGYGGG 219
GF S G G R S G RGGG+ GYG+ F +G G
Sbjct: 210 LMNEYTQGFSPSPISGYGVKPEVRYSPGLGNRGGGFSPFGHGYGIELNFEPDQSQNFGSG 269
Query: 220 MGAYRGEPSSLGYS---GRYGG 238
A G P S GY+ GRYG
Sbjct: 270 SSAGFGRPLSPGYAPSLGRYGS 291
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ ++ K+F+GGI ED +++F FG+V E IM+D +T R+RGFGF+ F +
Sbjct: 2 EMESCKLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVFLRHVID--GKLVEAKKAVPR 83
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 105/155 (67%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKDF 54
M+D+ TG+PRGFGFV ++DPSV+D+V++D H I+ ++V++KR + + G G+ +
Sbjct: 38 MRDKLTGRPRGFGFVIFSDPSVLDRVLQDKHNIDTREVDVKRAMSREEQQVSGRTGNLNT 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
KTKKIFVGG+P ++ ++EF+ +F +G V + IM D +T+R RGFGF++
Sbjct: 98 SRSSGGDSFNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FD+E AVD +L K +L+G QVEVK+A PK N
Sbjct: 158 FDSEDAVDRVLHKTFH-DLSGKQVEVKRALPKDAN 191
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +ED+ ++ F +G+V + +MRD T R RGFGF+ F +D +L
Sbjct: 7 KLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+K + +V+VK+A ++
Sbjct: 66 -DKHNIDTREVDVKRAMSRE 84
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 105/155 (67%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKDF 54
M+D+ TG+PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + + G G+ +
Sbjct: 38 MRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNT 97
Query: 55 ----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
KTKKIFVGG+P ++ ++EF+ +F +G V + IM D +T+R RGFGF++
Sbjct: 98 SRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FD+E AVD +L K +L+G QVEVK+A PK N
Sbjct: 158 FDSEDAVDSVLHKTFH-DLSGKQVEVKRALPKDAN 191
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI +ED+ ++ F +G+V + +MRD T R RGFGF+ F +D +L +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ +V+VK+A ++
Sbjct: 67 KHSIDT--REVDVKRAMSRE 84
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD--------F 54
D+ TG+PRGFGFV +ADP + DKVI H I+ ++VE K+ +PK +
Sbjct: 40 DKHTGRPRGFGFVVFADPIIADKVISVQHTIDRREVEAKKALPKDESPVRKEEQAASGGH 99
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+TKK+FVGG+ ++V+ED F+ +F +FG V + +M DH R RGFGFITF E++VD +
Sbjct: 100 RTKKVFVGGLAATVDEDTFRAYFEEFGLVDDAVVMFDHENKRPRGFGFITFADEESVDAV 159
Query: 115 LAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAY 163
A+G + Q+E+K+A P+ P P ++ +P A+ G AY
Sbjct: 160 FARGTIQTIHDKQIEIKRAVPRDSMPPSPRALQHRSPM-AHHPGVPPAY 207
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + + +F +G VQE + D T R RGFGF+ F D +++
Sbjct: 7 KVFIGGLSWETTDQKLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFADPIIADKVISV 66
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ +VE KKA PK
Sbjct: 67 QHTID--RREVEAKKALPK 83
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE--DTHIINGKQVEIKRTIPKGAV 49
M D + +PRGFGF+T+AD VD V I+ KQ+EIKR +P+ ++
Sbjct: 134 MFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHDKQIEIKRAVPRDSM 184
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 103/155 (66%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI------PKGAVG---- 50
M+++ TG+PRGFGFV ++DP+V+D+V++D H I+ + V++KR + P G G
Sbjct: 38 MREKATGRPRGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGNFNA 97
Query: 51 SKDF------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
S++F +TKKIFVGG+P ++ DEF+ +F +G V + IM D +T R RGFGF++
Sbjct: 98 SRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FD+E +VD +L K +L G QVEVK+A PK N
Sbjct: 158 FDSEDSVDLVLHKTFH-DLNGKQVEVKRALPKDAN 191
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F FG+V + +MR+ +T R RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLP 141
+K + V+VK+A ++ P
Sbjct: 66 -DKHHIDNRDVDVKRAMSREEQSP 88
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 103/155 (66%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI------PKGAVG---- 50
M+++ TG+PRGFGFV ++DP+V+D+V++D H I+ + V++KR + P G G
Sbjct: 38 MREKATGRPRGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNA 97
Query: 51 SKDF------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
S++F +TKKIFVGG+P ++ DEF+ +F +G V + IM D +T R RGFGF++
Sbjct: 98 SRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FD+E +VD +L K +L G QVEVK+A PK N
Sbjct: 158 FDSEDSVDLVLHKTFH-DLNGKQVEVKRALPKDAN 191
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E+ +++F FG+V + +MR+ +T R RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ- 65
Query: 118 GNKLELAGAQVEVKKAEPKKPNLP 141
+K + V+VK+A ++ P
Sbjct: 66 -DKHHIDNRDVDVKRAMSREEQSP 88
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 103/156 (66%), Gaps = 14/156 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-----------GAV 49
M+DR TG+ RGFGFV +ADP +V+ + H+I+G+ VE K+ +P+ G +
Sbjct: 36 MRDRATGRARGFGFVVFADPVAAARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGIL 95
Query: 50 GSK-DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
GS +TKKIFVGG+ S+V E +FK +F QFG + + +M DH+T R RGFGFIT+++E
Sbjct: 96 GSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 155
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
++V+ +L K EL G VEVK+A PK+ + P P+
Sbjct: 156 ESVEKVLYKTFH-ELNGKMVEVKRAVPKESS-PVPN 189
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +ED +++F FG+V E IMRD +T R+RGFGF+ F A ++ +
Sbjct: 5 KLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE 64
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 65 KHVID--GRTVEAKKAVPR 81
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 13/152 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG--AVGSKD----- 53
MKDR TG+ RGFGF+ +ADP+V ++V+ H+I+GK VE K+ +P+ V ++
Sbjct: 37 MKDRATGRARGFGFLVFADPTVAERVVLIRHVIDGKIVEAKKAVPRDDHVVLNRSSSSLQ 96
Query: 54 -----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+KKIFVGG+ SSV E EFK +F QFG + + +M DH T R RGFGFI+F++E
Sbjct: 97 GSPGPATSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESE 156
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNL 140
+AVD +L + EL G VEVK A PK+ L
Sbjct: 157 EAVDRVLQRTFH-ELNGKMVEVKLAVPKEMAL 187
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+ K+F+GGI ED +++F FG+V E IM+D +T R+RGFGF+ F + ++
Sbjct: 4 SCKLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERVV 63
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
+ ++ G VE KKA P+
Sbjct: 64 LIRHVID--GKIVEAKKAVPR 82
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 99/163 (60%), Gaps = 25/163 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKDF 54
M+D+ TG+PRGFGFV YADP+ VD +++ H ++G+ V++KR + + AV
Sbjct: 38 MRDKLTGRPRGFGFVVYADPASVDAALQEPHTLDGRTVDVKRALSREEQQATKAVNPSAG 97
Query: 55 ------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSR 96
+TKKIFVGG+PSS+ ++EF+ +F FG V + +M D +T R
Sbjct: 98 RNAGGGGGGGGGGDAGGARTKKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQR 157
Query: 97 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
RGFGFITFD+E AVD +L K +L G VEVK+A P++ N
Sbjct: 158 PRGFGFITFDSEDAVDRVLHK-TFHDLGGKMVEVKRALPREAN 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ ++ F FG+V + +MRD T R RGFGF+ + +VD L +
Sbjct: 7 KLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQE 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 25/163 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+D+ TG+PRGFGFV +ADP+ VD+ ++D H ++G+ V++KR + + +
Sbjct: 38 MRDKITGRPRGFGFVVFADPAAVDRALQDPHTLDGRTVDVKRALSREEQQASKAANPSGG 97
Query: 55 ------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSR 96
+TKKIFVGG+PS++ ED F+ +F FG V + +M D +T R
Sbjct: 98 RNSGGGGGGGGGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQR 157
Query: 97 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
RGFGFITFD+E AVD +L K +L G VEVK+A P++ N
Sbjct: 158 PRGFGFITFDSEDAVDRVLQK-TFHDLGGKLVEVKRALPREAN 199
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ + F +G+V + +MRD T R RGFGF+ F AVD L
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQD 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 102/147 (69%), Gaps = 9/147 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG-----AVGSK--- 52
MKD+ TG+PRGFGFV +ADPSV+D+V++DTH I+G+ V+ ++T + A +
Sbjct: 38 MKDKTTGRPRGFGFVVFADPSVLDRVLQDTHTIDGRTVKEQQTNARAGNLNPARNTSSGG 97
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ +TKKIFVGG+P ++ +D F+ +F FG V + IM D ST R RGFGFI+FD+E AVD
Sbjct: 98 NIRTKKIFVGGLPPTLTDDGFRQYFEAFGLVTDVVIMYDQSTQRPRGFGFISFDSEDAVD 157
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPN 139
+L + +L G QVEVK+A PK+ N
Sbjct: 158 RVLQRTFH-DLNGKQVEVKRALPKEAN 183
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E++ ++F Q+GDV + +M+D +T R RGFGF+ F +D +L
Sbjct: 7 KLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDRVLQD 66
Query: 118 GNKLE 122
+ ++
Sbjct: 67 THTID 71
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
MKDR TG+ RGFGF+ +ADP+V ++V+ H+I+GK VE K+ +P+ S
Sbjct: 38 MKDRSTGRARGFGFLVFADPNVAERVVLLRHVIDGKLVEAKKAVPRDDHKSNSSLQGSSP 97
Query: 54 --FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 111
+KKIFVGG+ SSV E EFK +F QFG + + +M D T R RGFGFI++++E AV
Sbjct: 98 GPANSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAV 157
Query: 112 DDLLAKGNKLELAGAQVEVKKAEPKKP 138
D +L + EL G VEVK A PK P
Sbjct: 158 DRVLRRTFH-ELNGKMVEVKLAVPKDP 183
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D ++ K+F+GGI ED +D+F FG+V E IM+D ST R+RGFGF+ F +
Sbjct: 2 DMESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAE 61
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ + ++ G VE KKA P+
Sbjct: 62 RVVLLRHVID--GKLVEAKKAVPR 83
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 5/140 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV-GSKDFKTKKI 59
M+D+ TG+PRGFGFV ++DPSV+D V+ D H I+G+ V I +P + G TKKI
Sbjct: 38 MRDKTTGRPRGFGFVVFSDPSVLDPVLHDKHTIDGRTVII---LPLSLLWGLSCIGTKKI 94
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+PS+V ED F+ +F +G V + +M D T R RGFGFITFD+E AVD++L K
Sbjct: 95 FVGGLPSTVTEDGFRQYFQSYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQKTF 154
Query: 120 KLELAGAQVEVKKAEPKKPN 139
EL G VEVK+A PK N
Sbjct: 155 H-ELNGKLVEVKRALPKDAN 173
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI ED +D F Q+G+V + IMRD +T R RGFGF+ F +D +L
Sbjct: 7 KLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLDPVLHD 66
Query: 118 GNKLE 122
+ ++
Sbjct: 67 KHTID 71
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 17/155 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
M+D+ TG+PRGFGFV +ADPSV+D V+++ H I+G+ VE KR + + +
Sbjct: 38 MRDKTTGRPRGFGFVVFADPSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTG 97
Query: 53 --------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+FKTKKIFVGG+PS++ E+ F+ +F +G V + +M D +T R RGFGFI+
Sbjct: 98 RSSSGMGGNFKTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFIS 157
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
FDTE AVD +L K +L G VEVK+A PK N
Sbjct: 158 FDTEDAVDRVLHKTFH-DLNGKLVEVKRALPKDAN 191
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGIP E++ K++F Q+GDV + IMRD +T R RGFGF+ F +D +L +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 118 GNKLELAGAQVEVKKA 133
+ ++ G VE K+A
Sbjct: 67 KHTID--GRTVEAKRA 80
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 28/172 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQ--------------VEIKRTIPK 46
M+DR TG+ RGFGF+ +ADP+V ++VI + H+I+G+ VE K+ +P+
Sbjct: 38 MRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMIHDDDDGVLDPSMVVEAKKAVPR 97
Query: 47 -----------GAVGSK-DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHST 94
A GS +TKKIFVGG+ S+V E +F+ +F QFG + + +M DH+T
Sbjct: 98 DDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNT 157
Query: 95 SRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
R RGFGFIT+D+E AVD L K EL G VEVK+A PK+ + P PS R
Sbjct: 158 QRPRGFGFITYDSEDAVDKALFKTFH-ELNGKMVEVKRAVPKELS-PGPSMR 207
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +++F ++G+V E IMRD +T R+RGFGFI F + ++ +
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 118 GNKLE------------LAGAQVEVKKAEPK 136
+ ++ VE KKA P+
Sbjct: 67 KHMIDGRMIHDDDDGVLDPSMVVEAKKAVPR 97
>gi|449489576|ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats.
Identities = 99/201 (49%), Positives = 121/201 (60%), Gaps = 26/201 (12%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
F+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+LE+AG+QVE+KK
Sbjct: 1525 FRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK 1584
Query: 133 AEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGG------------------ 174
AEPKK N P +R+++ +P+Y +GDAYG +GGGG+ G
Sbjct: 1585 AEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYG 1644
Query: 175 ----GFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEF-GGYGGYGGGMGAYR--GEP 227
G G GG G YR + G + G +F GGYGG GAY G P
Sbjct: 1645 GNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAP 1704
Query: 228 SSLGYSGRYG-GFNRGYDVTG 247
S+ GY+G Y G GY G
Sbjct: 1705 STGGYAGSYDMGMGTGYAAGG 1725
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 87 VGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV++ L++
Sbjct: 87 VGGVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSR--P 144
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVKKA+P+
Sbjct: 145 LAICGKPIEVKKAQPR 160
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 11/161 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ + S VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 218 MKDTATGRSRGFGFLTFENASSVDEVVKTQHILDGKVIDPKRAIPREEQD----KTGKIF 273
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+DT AV D + +
Sbjct: 274 VGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAV-DRVCQNKF 332
Query: 121 LELAGAQVEVKKAEP------KKPNLPQPSYRRYNNPKPAY 155
+E G Q+E+K+AEP K+P + QP + +NP Y
Sbjct: 333 IEFKGKQIEIKRAEPRQLQKQKQPQMTQPMGQNMSNPMQQY 373
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 45 PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
PK K+F+GG+ E+ +D+F ++G V E +IM+D +T RSRGFGF+T
Sbjct: 174 PKAIKADLSRDINKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLT 233
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F+ +VD+++ + L+ G ++ K+A P++
Sbjct: 234 FENASSVDEVVKTQHILD--GKVIDPKRAIPRE 264
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 87 VGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 143 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 198
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 199 VGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 256
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 257 LEILGKPIEVKKAQPR 272
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 172 EHYLD--GKIIDPKRAIPR 188
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 131 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 186
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 187 VGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 244
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 245 LEILGKPIEVKKAQPR 260
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 160 EHYLD--GKIIDPKRAIPR 176
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 35/173 (20%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
M+D+ TG+PRGFGFV ++DPS VD + D H ++G+ V++KR + + +
Sbjct: 38 MRDKLTGRPRGFGFVVFSDPSSVDAALVDPHTLDGRTVDVKRALSREEQQAAKAANPSAG 97
Query: 54 ---------------------------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEH 86
+TKKIFVGG+PS++ EDEF+ +F +G V +
Sbjct: 98 GRHASGGGGGGGGAGGGGGGGGGDAGGARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDV 157
Query: 87 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
+M D +T R RGFGFITFD E AVD +L K +L+G VEVK+A P++ N
Sbjct: 158 VVMYDQNTQRPRGFGFITFDAEDAVDRVLHK-TFHDLSGKMVEVKRALPREAN 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ +D F +GDV + +MRD T R RGFGF+ F +VD L
Sbjct: 7 KLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAALVD 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 87 VGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 115 MIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQPRGNLRDED 167
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 143 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 198
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 199 VGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 256
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 257 LEILGKPIEVKKAQPR 272
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 172 EHYLD--GKIIDPKRAIPR 188
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 92/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP VD+VI+ HI++GK ++ KR I A +D K KIF
Sbjct: 118 MRDNNTGKSRGFGFLTFKDPKSVDEVIKTDHILDGKLIDPKRAI---AREEQD-KVGKIF 173
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE +F DFF QFG + + Q+M D T RSRGFGFIT+D+ AVD + NK
Sbjct: 174 VGGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV--NK 231
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 232 YLTLKGKSMEVKRAEPR 248
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E ++F ++G+V +H IMRD++T +SRGFGF+TF ++VD+++
Sbjct: 87 KMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIKT 146
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 147 DHILD--GKLIDPKRA 160
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 42 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 97
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 98 VGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ--P 155
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 156 LEILGKPIEVKKAQPR 171
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 71 EHYLD--GKIIDPKRAIPR 87
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 126 MIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQPRGNLRDED 178
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 142 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 197
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 198 VGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 255
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 256 LEILGKTIEVKKAQPR 271
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + K++F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 171 EHYLD--GKIIDPKRAIPR 187
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV 49
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G +
Sbjct: 226 MIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVKKAQPRGNL 274
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ DP VD+VI+ HI++GK ++ KR I A +D K KIF
Sbjct: 195 MKDASTGRSRGFGFLTFKDPRAVDEVIKKDHILDGKLIDPKRAI---AREEQD-KVGKIF 250
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE +F DFF QFG + + Q+M D T RSRGFGFIT+D+ +AVD + NK
Sbjct: 251 VGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCV--NK 308
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 309 YLTLKGKAMEVKRAEPR 325
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ +F ++G++ ++ IM+D ST RSRGFGF+TF +AVD+++ K
Sbjct: 164 KMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKK 223
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 224 DHILD--GKLIDPKRA 237
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGF FVT++DP V+ V+ H ++GK ++ KR IP+ + KT+K F
Sbjct: 31 MRDGASGRSRGFAFVTFSDPKSVNAVMVREHFLDGKIIDPKRAIPR----PEQSKTQKCF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P +V +D FK F QFG V + +M D T R RGFGF+TF+ + V++ LA
Sbjct: 87 VGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTFENDDGVENTLAH-QP 145
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG-------FGDAYGGYGGGGFAG 173
L L G Q+EVK+A+ + P + R+++ PA GS +G + G AG
Sbjct: 146 LLLDGKQIEVKRAQSRGQPQPNAAPNRFSS-DPARGSNAQAPLRMWGSSPAAASMPGMAG 204
Query: 174 GGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGG 208
S G G + G R G G GG
Sbjct: 205 MAAMPSMAGMASGAM-APATDGARSPATGAMGAGG 238
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ +E+ + +F QFG V +MRD ++ RSRGF F+TF ++V+ ++ +
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVRE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HFLD--GKIIDPKRAIPR 76
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 99/144 (68%), Gaps = 5/144 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG---SKDFKT 56
MK+ +TG+ RGFGFVT+ DPS V V+ + H+++ +Q++ K+ P+ S +
Sbjct: 40 MKNPQTGKSRGFGFVTFKDPSCVKTVLANQPHVLDSRQIDPKQCNPRSMNKGGKSAENSK 99
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+PS++ EDE K+ F +FG+VQ+ IM D RSRGFGF+TFD E++V+ +++
Sbjct: 100 RKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEKVIS 159
Query: 117 KGNKLELAGAQVEVKKAEPKKPNL 140
+ + + + G QVE K+A+P++ L
Sbjct: 160 Q-HYVPVKGKQVECKRAQPREMKL 182
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ +F ++G+V + +M++ T +SRGFGF+TF V +LA
Sbjct: 9 KIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLAN 68
Query: 118 GNKLELAGAQVEVKKAEPKKPN 139
+ L Q++ K+ P+ N
Sbjct: 69 QPHV-LDSRQIDPKQCNPRSMN 89
>gi|224129580|ref|XP_002320621.1| predicted protein [Populus trichocarpa]
gi|222861394|gb|EEE98936.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK--DFKTKK 58
M+D+ TG+PRGFGFV ++DPS++D V++D H I+G+ V + +F+T K
Sbjct: 35 MRDKTTGRPRGFGFVVFSDPSLLDPVLQDKHTIDGRSVMTLSPFSSNSSNFLFCNFRTNK 94
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGG+P ++ ED F+ +F +G V + +M D T R RGFGFITFDTE AVD++L K
Sbjct: 95 IFVGGLPPTLMEDAFRQYFQSYGHVCDVVLMYDQQTQRPRGFGFITFDTEDAVDNVLQKT 154
Query: 119 NKLELAGAQVEVKKAEPKKPN 139
EL G VEVK+A PK N
Sbjct: 155 FH-ELNGKLVEVKRALPKDAN 174
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E+ +D F +G+V + IMRD +T R RGFGF+ F +D +L
Sbjct: 4 KLFIGGIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSLLDPVLQD 63
Query: 118 GNKLE 122
+ ++
Sbjct: 64 KHTID 68
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 144 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 199
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 200 VGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ--P 257
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 258 LEILGKPIEVKKAQPR 273
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 173 EHYLD--GKIIDPKRAIPR 189
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 228 MIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQPRGNLRDED 280
>gi|302785051|ref|XP_002974297.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
gi|302807955|ref|XP_002985671.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300146580|gb|EFJ13249.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300157895|gb|EFJ24519.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
Length = 187
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 94/151 (62%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS--------- 51
MKDR TG+ RGFGFV++ADPS D + + H ING+ VE K+ +P+ +
Sbjct: 38 MKDRNTGRARGFGFVSFADPSAADMAVAEKHTINGRLVEAKKAVPRDEQQTIPRSSISSG 97
Query: 52 ------KDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
+TKKIFVGG+ S+V E+EF+ +F QFG + + +M DH+T R RGFGFITF
Sbjct: 98 GQSPGGGQGRTKKIFVGGLASTVTEEEFRGYFEQFGTISDAVVMYDHTTQRPRGFGFITF 157
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
D+E +V+ +L K EL VEVK+A P+
Sbjct: 158 DSEDSVEAVLMKSFH-ELKDKMVEVKRAVPR 187
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ +D+F ++G++ E IM+D +T R+RGFGF++F A D +A
Sbjct: 7 KLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAAD--MAV 64
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQP 143
K + G VE KKA P+ P
Sbjct: 65 AEKHTINGRLVEAKKAVPRDEQQTIP 90
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 87 VGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS--GP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEICGKPIEVKKAQPR 160
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 95/136 (69%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ +PS VD+V++ HI++GK ++ KR+IP+ + KT KIF
Sbjct: 228 MKDGATGRSRGFGFLTFENPSSVDEVVKTQHILDGKVIDPKRSIPR----EEQDKTGKIF 283
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF+DFF Q+G + + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 284 VGGIGTDVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSGDAV-DRVCQNKY 342
Query: 121 LELAGAQVEVKKAEPK 136
+E G Q+E+K+AEP+
Sbjct: 343 IEFKGKQIEIKRAEPR 358
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+P A SKD K+F+GG+ ED K++F ++G+V E +IM+D +T RSRGFGF+
Sbjct: 185 VPVKADISKD--NCKMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFL 242
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
TF+ +VD+++ + L+ G ++ K++ P++
Sbjct: 243 TFENPSSVDEVVKTQHILD--GKVIDPKRSIPRE 274
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 144 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 199
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 200 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSR--P 257
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 258 LEILGKSIEVKKAQPR 273
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 173 EHYLD--GKIIDPKRAIPR 189
>gi|334188244|ref|NP_001190485.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008158|gb|AED95541.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 453
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 165/363 (45%), Gaps = 74/363 (20%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGK----------------------QV 38
MKDR TG+ RGFGFV +ADP+V ++V+ HII+GK V
Sbjct: 38 MKDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVV 97
Query: 39 EIKRTIPKG--AVGSKD----------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEH 86
E K+ +P+ V +K +KKIFVGG+ SSV E EFK +F QFG + +
Sbjct: 98 EAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDV 157
Query: 87 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+M DH T R RGFGFI++D+E+AVD +L K EL G VEVK A PK ++ + R
Sbjct: 158 VVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFH-ELNGKMVEVKLAVPK--DMALNTMR 214
Query: 147 RYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGG--GYG-G 203
N ++G+ + GF+ G G R S A G RGG +G G
Sbjct: 215 NQMNVN-SFGTSRISSLLNEYTQGFSPSPISGYGVKPE---VRYSPAVGNRGGFSPFGHG 270
Query: 204 YGVGGEF--GGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGG 261
YG+ F YG G G P S GY+ G F G ES GG
Sbjct: 271 YGIELNFEPNQTQNYGSGSSGGFGRPFSPGYAASLGRF----------GSQMES----GG 316
Query: 262 SGVGGGGGYGGGPSGYDIGLG------------SSYGGSSGGAFFGSRGGYGGAGGSSR- 308
+ VG G P + G G SS+ G+SG + GS G G +R
Sbjct: 317 ASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGMSSLGSIGDNWGTVARARS 376
Query: 309 -YH 310
YH
Sbjct: 377 SYH 379
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF------- 105
+ ++ K+F+GGI +ED +D+F FG+V E IM+D +T R+RGFGF+ F
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 106 ---------DTEQAVDDL----LAKGNKLELAGAQVEVKKAEPK 136
D + VD + L + +K VE KKA P+
Sbjct: 62 RVVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPR 105
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 96/136 (70%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD +G+ RGFGF+T+ +PS VD+V++ HI++GK ++ KR+IP+ + KT KIF
Sbjct: 189 MKDPNSGRSRGFGFLTFEEPSSVDEVVKTQHILDGKVIDPKRSIPR----EEQDKTGKIF 244
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF Q+G + + Q+M D T RSRGFGF+T+D+ +AV D + +
Sbjct: 245 VGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAV-DRVCQNKY 303
Query: 121 LELAGAQVEVKKAEPK 136
++ G Q+E+K+AEP+
Sbjct: 304 IDFKGKQIEIKRAEPR 319
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D ++ RSRGFGF+TF+ +VD+++
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVKT 217
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K++ P++
Sbjct: 218 QHILD--GKVIDPKRSIPRE 235
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 92/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ DP VD+VI+ HI++GK ++ KR I A +D K KIF
Sbjct: 192 MKDNNTGKSRGFGFLTFRDPKSVDEVIKTDHILDGKLIDPKRAI---AREEQD-KVGKIF 247
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE EF DFF QFG + + Q+M D + RSRGFGFITFD+ AVD + NK
Sbjct: 248 VGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTV--NK 305
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 306 FLTLKGKAMEVKRAEPR 322
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+T K+F+GG+ E+ +F +FG+V ++ IM+D++T +SRGFGF+TF ++VD++
Sbjct: 158 ETGKMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEV 217
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ + L+ G ++ K+A
Sbjct: 218 IKTDHILD--GKLIDPKRA 234
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 13/148 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV----------- 49
M+DR TG+ RGFGFV ++DP+ D+V+ D H I+G+ V + R V
Sbjct: 38 MRDRTTGRARGFGFVVFSDPNCADRVLLDKHTIDGR-VAVPRDEQHSVVKANGSAVAGPG 96
Query: 50 GSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
G KTKKIFVGG+ S+V ED+F+ +F QFG + + +M DH+T R RGFGFITFDTE+
Sbjct: 97 GHASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEE 156
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKK 137
AVD++L K EL VEVK+A PK+
Sbjct: 157 AVDNVLHKTFH-ELKEKMVEVKRAVPKE 183
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ KD+F +G+V E IMRD +T R+RGFGF+ F D +L
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD 66
Query: 118 GNKLE 122
+ ++
Sbjct: 67 KHTID 71
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 92/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V++VI+ HI++GK ++ KR I A +D K KIF
Sbjct: 193 MRDNATGKSRGFGFLTFKDPKSVEEVIKRDHILDGKLIDPKRAI---AREEQD-KVGKIF 248
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE EF DFF QFG + + Q+M D T RSRGFGFIT+D+ AVD + NK
Sbjct: 249 VGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV--NK 306
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 307 YLTLKGKSMEVKRAEPR 323
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ +E D+F QFG+V ++ IMRD++T +SRGFGF+TF ++V++++ +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR 221
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 222 DHILD--GKLIDPKRA 235
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 87 VGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS--GP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEICGKPIEVKKAQPR 160
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ D + VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 188 MKDNNTGRSRGFGFLTFEDATSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 243
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF+DFF Q+G + + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 244 VGGIGADVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQNKF 302
Query: 121 LELAGAQVEVKKAEPK 136
+E G Q+E+K+AEP+
Sbjct: 303 IEFKGKQIEIKRAEPR 318
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 45 PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
P A SKD + K+F+GG+ E+ +D+F ++G V E +IM+D++T RSRGFGF+T
Sbjct: 146 PVKADLSKD--SCKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLT 203
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F+ +VD+++ + L+ G ++ K+A P++
Sbjct: 204 FEDATSVDEVVKTQHILD--GKVIDPKRAIPRE 234
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 87 VGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKTIEVKKAQPR 160
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + K++F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV 49
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G +
Sbjct: 115 MIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVKKAQPRGNL 163
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 92/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V++VI+ HI++GK ++ KR I A +D K KIF
Sbjct: 193 MRDNATGKSRGFGFLTFKDPKSVEEVIKRDHILDGKLIDPKRAI---AREEQD-KVGKIF 248
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE EF DFF QFG + + Q+M D T RSRGFGFIT+D+ AVD + NK
Sbjct: 249 VGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV--NK 306
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 307 YLTLKGKSMEVKRAEPR 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ +E D+F QFG+V ++ IMRD++T +SRGFGF+TF ++V++++ +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKR 221
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 222 DHILD--GKLIDPKRA 235
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 140 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 195
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 196 VGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS--GP 253
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 254 LEICGKPIEVKKAQPR 269
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 169 EHYLD--GKIIDPKRAIPR 185
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 58 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 113
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 114 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSR--P 171
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 172 LEILGKSIEVKKAQPR 187
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 87 EHYLD--GKIIDPKRAIPR 103
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 42 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 97
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 98 VGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 155
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVKKA+P+
Sbjct: 156 LAICGKPIEVKKAQPR 171
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+ +K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+
Sbjct: 7 WLIRKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNT 66
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
++ K + L+ G ++ K+A P+
Sbjct: 67 VMVKEHYLD--GKIIDPKRAIPR 87
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 93/138 (67%), Gaps = 5/138 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M++ TG+ RGFGF+T+A+P VD+V++ H+++GK ++ KR IP+ KT KIF
Sbjct: 160 MRESSTGRSRGFGFLTFAEPRSVDEVVKTEHVLDGKVIDPKRAIPRDEQD----KTGKIF 215
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF +FG + + Q+M D T RSRGFGF+TFD AV D + +G
Sbjct: 216 VGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAV-DRVCQGRY 274
Query: 121 LELAGAQVEVKKAEPKKP 138
L+ G Q+EVK+AEP+ P
Sbjct: 275 LDFNGRQIEVKRAEPRGP 292
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ +E+ K++F +FG+V +H IMR+ ST RSRGFGF+TF ++VD+++
Sbjct: 129 KMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVKT 188
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 189 EHVLD--GKVIDPKRAIPR 205
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 95/136 (69%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ PS VD+V++ HI++GK ++ KR+IP+ + KT KIF
Sbjct: 126 MKDSNTGRSRGFGFLTFEHPSSVDEVVKTQHILDGKVIDPKRSIPR----EEQDKTGKIF 181
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF Q+G++ + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 182 VGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQSKY 240
Query: 121 LELAGAQVEVKKAEPK 136
+E G Q+E+K+A+P+
Sbjct: 241 IEFKGKQIEIKRAQPR 256
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ +D+F ++G V + +IM+D +T RSRGFGF+TF+ +VD+++
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K++ P++
Sbjct: 155 QHILD--GKVIDPKRSIPRE 172
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 140 MRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 195
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ NE +FK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 196 VGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS--GP 253
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 254 LEICGKPIEVKKAQPR 269
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 169 EHYLD--GKIIDPKRAIPR 185
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT++DP+ V+ VI+ TH ++ K+V+ K PK + KTKKI
Sbjct: 53 MRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGI +S E K FF ++G V+E +M D +T+R RGFGF+ FD E+ VD + + +
Sbjct: 113 FVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEE-H 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQ 142
EL G VEVKKA+PK+ +PQ
Sbjct: 172 FHELDGKLVEVKKAQPKEVMMPQ 194
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D + +F QFG+V+E IMRD +T RSRGFGF+TF V+ ++ +
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQP 143
G E+ +V+ K A PK+ + P+P
Sbjct: 82 GTH-EVDKKKVDPKVAFPKR-SHPKP 105
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 87 VGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKAIEVKKAQPR 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 115 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 173
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 174 KRGF----RDDRFKD 184
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT++DP+ V+ VI+ TH ++ K+V+ K PK + KTKKI
Sbjct: 53 MRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGI +S E K FF ++G V+E +M D +T+R RGFGF+ FD E+ VD + + +
Sbjct: 113 FVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDS-VCEEH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQ 142
EL G VEVKKA+PK+ +PQ
Sbjct: 172 FHELDGKLVEVKKAQPKEVMMPQ 194
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D + +F QFG+V+E IMRD +T RSRGFGF+TF V+ ++ +
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPA 154
G +V+ KK +PK ++ + ++PKP
Sbjct: 82 GTH------EVDKKKVDPKV------AFPKRSHPKPV 106
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 190 MRDGPSGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 245
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +E+EFK+FFMQFG V + +M D T R RGFGF+TFD E AV DL +
Sbjct: 246 VGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGFGFVTFDNEAAV-DLALQHPD 304
Query: 121 LELAGAQVEVKKAEPK 136
L + +EVKKA+P+
Sbjct: 305 LRIRDKPIEVKKAQPR 320
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +D+F QFG+V E +MRD + RSRGFGF+TF + V+ ++ K
Sbjct: 159 KMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMVK 218
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 219 EHYLD--GKIIDPKRAIPR 235
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKGAVGSKDFK 55
M D++TG+PRGFGFVT+ + + VD ++ + I K +E+K+ P+G ++F+
Sbjct: 274 MIDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQPRGNARERNFE 329
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+A+ S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 240 MRDNATGRSRGFGFLTFAEASSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 295
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+DT AV D + +
Sbjct: 296 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAV-DRVCENKF 354
Query: 121 LELAGAQVEVKKAEPK 136
+E G ++E+K+AEP+
Sbjct: 355 IEFKGKRIEIKRAEPR 370
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED KD+F ++G V + +IMRD++T RSRGFGF+TF +VD+++
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVKT 268
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 269 QHILD--GKVIDPKRAIPRE 286
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 137 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRD----EQEKTSKIF 192
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 193 VGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 250
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVKKA+P+
Sbjct: 251 LAICGKPIEVKKAQPR 266
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 166 EHYLD--GKIIDPKRAIPR 182
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 137 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRD----EQEKTSKIF 192
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK+FF QFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 193 VGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR--P 250
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVKKA+P+
Sbjct: 251 LAICGKPIEVKKAQPR 266
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 166 EHYLD--GKIIDPKRAIPR 182
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 10/158 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+++AD S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 203 MRDGTTGRSRGFGFLSFADASSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 258
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF ++G + + Q+M D T RSRGFGFIT+D+ AV D + +
Sbjct: 259 VGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAV-DRVCQNKF 317
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 158
+E G ++E+K+AEP+ Q +R NP P SG
Sbjct: 318 IEFKGKRIEIKRAEPR-----QVQKQRTTNPSPTTQSG 350
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V E +IMRD +T RSRGFGF++F +VD+++
Sbjct: 172 KMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVVKT 231
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 232 QHILD--GKVIDPKRAIPRE 249
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 87 VGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKAIEVKKAQPR 160
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 115 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 173
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 174 KRGF----RDDRFKD 184
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--- 57
M+D+ TG PRGFGFVT+ D+ H ++G+QVE K+ +PK ++ TK
Sbjct: 82 MRDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVPKAEYITRSQVTKPTR 141
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P S E++F ++F + G V E IM DH T SRGFGF+TF +E V+ + +
Sbjct: 142 KIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQ 201
Query: 118 GNKLELAGAQVEVKKAEPK 136
E+ G VEVKKAEPK
Sbjct: 202 SQH-EIKGKIVEVKKAEPK 219
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 34 NGKQVEIKRTIPKGAVGSK------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQ 87
+ KQ + K +I AV ++ KIFVGG+ E+ + +F +G V +
Sbjct: 21 SNKQSKEKTSIESNAVRAEHSDPGNQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCV 80
Query: 88 IMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
IMRD T RGFGF+TF+ E++ D K + EL G QVE KKA PK
Sbjct: 81 IMRDKHTGHPRGFGFVTFEKEESADRAATK--RHELDGRQVEAKKAVPK 127
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT++DP+ V+ VI+ TH ++ K+V+ K PK + KTKKI
Sbjct: 53 MRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGGI +S E K FF ++G V+E +M D +T+R RGFGF+ FD E+ VD + + +
Sbjct: 113 FVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDS-VCEEH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQ 142
EL G VEVKKA+PK+ +PQ
Sbjct: 172 FHELDGKLVEVKKAQPKEVMMPQ 194
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D + +F QFG+V+E IMRD +T RSRGFGF+TF V+ ++ +
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPA 154
G +V+ KK +PK ++ + ++PKP
Sbjct: 82 GTH------EVDKKKVDPKV------AFPKRSHPKPV 106
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 90/143 (62%), Gaps = 8/143 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV------GSKDF 54
MKD+ TG PRGFGF+ + D +V+D+++ H I+GK V++KR +PK S+
Sbjct: 180 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPA 239
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+T KIFVGG+ +V EF+ +F FG V + +M D T RSRGFGF+TF + V D+
Sbjct: 240 ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDI 299
Query: 115 LAKGNKLELAGAQVEVKKAEPKK 137
+ + E+ G VEVK+AEPK+
Sbjct: 300 MMGTH--EINGKMVEVKRAEPKE 320
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E+ + F ++G + + +M+D T RGFGFI F+ +D++L++
Sbjct: 149 KLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQ 208
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+K++ G V+VK+A PK P PS R
Sbjct: 209 EHKID--GKVVDVKRAVPKS-EAPGPSSR 234
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 148 MRDGSTGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 203
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKDFF QFG V + +M D T R RGFGF+TF++E VD LA+ +
Sbjct: 204 VGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLAQ--E 261
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 262 LEIHGKPIEVKKAQPR 277
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +++F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 117 KMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMVK 176
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 177 EHYLD--GKIIDPKRAIPR 193
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ + S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 196 MKDNNTGRSRGFGFLTFENASSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 251
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF Q+G + + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 252 VGGIGADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQSKY 310
Query: 121 LELAGAQVEVKKAEPK 136
+E G Q+E+K+AEP+
Sbjct: 311 IEFKGKQIEIKRAEPR 326
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 34 NGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHS 93
N Q ++K + K + K+F+GG+ ED +D+F ++G V E +IM+D++
Sbjct: 149 NDSQRKVKADLSKDSC--------KMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNN 200
Query: 94 TSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
T RSRGFGF+TF+ +VD+++ + L+ G ++ K+A P++
Sbjct: 201 TGRSRGFGFLTFENASSVDEVVKTQHILD--GKVIDPKRAIPRE 242
>gi|384248222|gb|EIE21707.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 128
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T +PRGFGF+T D ++ + TH+++G+Q++ KR++P+ S+ K +K+F
Sbjct: 5 MRDKYTNRPRGFGFLTLDDEDAAAQICQGTHVLDGRQIDAKRSLPQ----SQKPKLRKLF 60
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ ED FK++F QFGD+ E QIM+DH++ RSRGFGFIT++ E+A++ + AKG
Sbjct: 61 VGGLAPETTEDNFKEYFGQFGDITEAQIMQDHTSGRSRGFGFITYEDEEAIEKVFAKGRM 120
Query: 121 LELAGAQV 128
ELAG V
Sbjct: 121 HELAGKNV 128
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 85 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP--KKPNL 140
E IMRD T+R RGFGF+T D E A + +G + L G Q++ K++ P +KP L
Sbjct: 1 EQIIMRDKYTNRPRGFGFLTLDDEDAAAQ-ICQGTHV-LDGRQIDAKRSLPQSQKPKL 56
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 94/136 (69%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ +PS VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 189 MKDTNTGRSRGFGFLTFDEPSSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 244
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF Q+G + + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 245 VGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQNKF 303
Query: 121 LELAGAQVEVKKAEPK 136
++ G ++E+K+AEP+
Sbjct: 304 IDFKGKKIEIKRAEPR 319
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 43 TIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
T P A S+D K+F+GG+ ED +D+F ++G V + +IM+D +T RSRGFGF
Sbjct: 145 TNPVKADLSRDIC--KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGF 202
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+TFD +VD+++ + L+ G ++ K+A P++
Sbjct: 203 LTFDEPSSVDEVVKTQHILD--GKVIDPKRAIPRE 235
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 92/138 (66%), Gaps = 9/138 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF-KTKKI 59
MKD TG+ RGFGF+T+ DPS VD VI+ HI++GK ++ PK A+ +D + KI
Sbjct: 203 MKDNATGRSRGFGFLTFKDPSAVDVVIKQDHILDGKLID-----PKRAISREDQDRVGKI 257
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GGI V+E+EF DFF +FG + + Q+M D T RSRGFGFITFD+ AVD + N
Sbjct: 258 FIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCV--N 315
Query: 120 K-LELAGAQVEVKKAEPK 136
K L L G +EVK+A P+
Sbjct: 316 KFLTLKGKAMEVKRAAPR 333
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ ++F +FG++ ++ IM+D++T RSRGFGF+TF AVD ++ +
Sbjct: 172 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 231
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 232 DHILD--GKLIDPKRA 245
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV------GSKDFKT 56
+R G+PRGFGFV + P V DKV+ H I+ ++VE K+ +PK GS +T
Sbjct: 41 NRNNGRPRGFGFVVFESPEVADKVVATKHTIDRREVEAKKAVPKEETPEEKQQGSAPQRT 100
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KKIFVGG+ SV+E + + F QFG V++ +M DH R RGFGF+TF E AVD + +
Sbjct: 101 KKIFVGGLAPSVDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVDRVFS 160
Query: 117 KGNKLELAGAQVEVKKAEPKKPNLPQPSYRRY 148
G +A +EVK A P+ +P P+ R +
Sbjct: 161 HGAVQTIADKPIEVKAAVPRD-QMP-PTLRMH 190
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D ++ K+F+GG+ ++ + +F FG V+E + + + R RGFGF+ F++ + D
Sbjct: 3 DKQSAKVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVAD 62
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++A + ++ +VE KKA PK+
Sbjct: 63 KVVATKHTID--RREVEAKKAVPKE 85
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED--THIINGKQVEIKRTIPKGAV 49
M D + +PRGFGFVT+A+ VD+V I K +E+K +P+ +
Sbjct: 133 MYDHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAVPRDQM 183
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 215 MRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 270
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKDFF QFG V + +M D T R RGFGF+TF++E V+ LA+
Sbjct: 271 VGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARD-- 328
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 329 LEIHGKLIEVKKAQPR 344
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 28 EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQ 87
E + +G+ ++T+ A +F K+F+GG+ ++ +D+F QFG+V E
Sbjct: 156 EPAQVTSGRWSNQEQTLRPIATSLVEFS--KMFIGGLNWETTDESLRDYFSQFGEVIECT 213
Query: 88 IMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+MRD +T RSRGFGF+TF + V+ ++ K + L+ G ++ K+A P+
Sbjct: 214 VMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLD--GKIIDPKRAIPR 260
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 91/137 (66%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D VD VI+ H+++GK ++ KR I A +D K KIF
Sbjct: 31 MRDSATGKSRGFGFLTFKDTKSVDAVIQGDHVLDGKLIDPKRAI---AREEQD-KVGKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE EF DFF QFG + + Q+M D T RSRGFGFITFD+ +AVD + NK
Sbjct: 87 VGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTV--NK 144
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 145 FLTLKGKSMEVKRAEPR 161
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ E ++F +FG+V +H IMRD +T +SRGFGF+TF ++VD ++ +G
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVI-QG 59
Query: 119 NKLELAGAQVEVKKA 133
+ + L G ++ K+A
Sbjct: 60 DHV-LDGKLIDPKRA 73
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 91/137 (66%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D VD VI+ H+++GK ++ KR I A +D K KIF
Sbjct: 31 MRDSATGKSRGFGFLTFKDTKSVDAVIQGDHVLDGKLIDPKRAI---AREEQD-KVGKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI VNE EF DFF QFG + + Q+M D T RSRGFGFITFD+ +AVD + NK
Sbjct: 87 VGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTV--NK 144
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 145 FLTLKGKSMEVKRAEPR 161
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ E ++F +FG+V +H IMRD +T +SRGFGF+TF ++VD ++ +G
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVI-QG 59
Query: 119 NKLELAGAQVEVKKA 133
+ + L G ++ K+A
Sbjct: 60 DHV-LDGKLIDPKRA 73
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 151 MRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 206
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKDFF QFG V + +M D T R RGFGF+TF++E V+ LA+
Sbjct: 207 VGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARD-- 264
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 265 LEIHGKLIEVKKAQPR 280
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 120 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK 179
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 180 EHYLD--GKIIDPKRAIPR 196
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D + R RGFGF+TFD+E AV+ L+
Sbjct: 87 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS--GP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG 47
M D+ +G+PRGFGFVT+ + V+ + I GK +E+K+ P+G
Sbjct: 115 MIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQPRG 161
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 137 MRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPR----EEQERTSKIF 192
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F +FF QFG V + +M D T R RGFGF+TFD + AVD L
Sbjct: 193 VGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRA--P 250
Query: 121 LELAGAQVEVKKAEPK 136
L++ G Q+EVK+A+P+
Sbjct: 251 LQILGKQIEVKRAQPR 266
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ K++F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 166 EHYLD--GKIIDPKRAIPRE 183
>gi|452824817|gb|EME31817.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 345
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK-- 58
M+D+ TG PRGFGFVT+ D SV D V +HI++G+QVE K+ +PK V +K+ TK
Sbjct: 63 MRDKYTGHPRGFGFVTFQDDSVADLVASLSHILDGRQVEAKKAVPKAEVSTKNETTKTTK 122
Query: 59 -IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+FVGGI SS ++++F +F +FG V + IM DH T +SRGFGFITF + +AVD +
Sbjct: 123 KLFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQT 182
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ + G VEVK AEPK ++
Sbjct: 183 PRHV-IKGKVVEVKVAEPKHQSV 204
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED + +F +G+V + IMRD T RGFGF+TF + +V DL+A
Sbjct: 32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQ-DDSVADLVAS 90
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + L G QVE KKA PK
Sbjct: 91 LSHI-LDGRQVEAKKAVPK 108
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP VV+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKVVNTVMVKEHTLDGKLIDPKRAIPR----DEQERTAKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ ++D+F +FF +FG+V + +M D T R RGFGF+TFD+E AVD L +
Sbjct: 87 VGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLE--SP 144
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 145 LAICGKNIEVKRAQPR 160
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ K++F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HTLD--GKLIDPKRAIPR 76
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+A S VD+V++ TH+++GK ++ KR IPK + KT KIF
Sbjct: 138 MKDNATGRSRGFGFLTFASSSSVDEVLKKTHVLDGKLIDPKRAIPK----EEQDKTGKIF 193
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ V E EF ++F QFG++ + Q+M D T RSRG+GF+T+D+ AV D + +
Sbjct: 194 VGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAV-DRVTQNKY 252
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAY 155
+ G +E+K+AEP+ SY P+ Y
Sbjct: 253 VLFHGKNMEIKRAEPRNQQKAGSSYSNIGQPQQTY 287
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 37 QVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSR 96
Q + + T+ + + SKD K+F+GG+ E+ K++F QFGDV + IM+D++T R
Sbjct: 89 QRQFQDTV-RADIQSKD--QGKMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGR 145
Query: 97 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
SRGFGF+TF + +VD++L K + L+ G ++ K+A PK+
Sbjct: 146 SRGFGFLTFASSSSVDEVLKKTHVLD--GKLIDPKRAIPKE 184
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP VV+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 257 MRDSATGRSRGFGFLTFKDPKVVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 312
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ L K
Sbjct: 313 VGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL--NAK 370
Query: 121 LELAGAQVEVKKAEPK 136
LEL G +EVKKA+P+
Sbjct: 371 LELHGKPIEVKKAQPR 386
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KK+F+GG+ ++ +++F QFG+V E +MRD +T RSRGFGF+TF + V+ ++
Sbjct: 225 KKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMV 284
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K+A P+
Sbjct: 285 KEHYLD--GKIIDPKRAIPR 302
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 9/139 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGK---QVEIKRTIPKGAVGSKDFKTK 57
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK +++ KR IP+ + +T
Sbjct: 31 MRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKILYKIDPKRAIPR----DEQERTS 86
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 87 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 146
Query: 118 GNKLELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 147 --PLEIHGKAIEVKKAQPR 163
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 119 NKLE-LAGAQVEVKKAEPK 136
+ L+ +++ K+A P+
Sbjct: 61 HYLDGKILYKIDPKRAIPR 79
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 118 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 176
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 177 KRGF----RDDRFKD 187
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
Query: 9 PRG-FGFVTYADPSVVDKVIEDT--HIINGKQVEIKRTIPKGA-----VGSKDFKTKKIF 60
PRG FGFVT+AD + + + ++D H I G++VE+KR + KG G+ +F +KKIF
Sbjct: 44 PRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIF 103
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ S++ E+EFK++F +FG + + +M D +T R RGFGFITF++E++V+ ++ + N
Sbjct: 104 VGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVM-QNNF 162
Query: 121 LELAGAQVEVKKAEPKK 137
EL G +VEVK+A PK+
Sbjct: 163 YELNGKRVEVKRAVPKE 179
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D T +PRGFGF+T+ V+ V+++ + +NGK+VE+KR +PK A
Sbjct: 132 MHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKEA 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ E +D+F ++G V E I RD + GFGF+TF ++ L
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G +VEVK+A K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 10/154 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+++AD S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 195 MRDGTTGRSRGFGFLSFADASSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 250
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+D+ AV D + +
Sbjct: 251 VGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAV-DRVCQNKF 309
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPA 154
+E G ++E+K+AEP+ Q +R N P
Sbjct: 310 IEFKGKRIEIKRAEPR-----QVQKQRTTNASPT 338
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G+V E +IMRD +T RSRGFGF++F +VD+++
Sbjct: 164 KMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVVKT 223
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 224 QHILD--GKVIDPKRAIPRE 241
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
Query: 9 PRG-FGFVTYADPSVVDKVIEDT--HIINGKQVEIKRTIPKGA-----VGSKDFKTKKIF 60
PRG FGFVT+AD + + + ++D H I G++VE+KR + KG G+ +F +KKIF
Sbjct: 44 PRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIF 103
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ S++ E+EFK++F +FG + + +M D +T R RGFGFITF++E++V+ ++ + N
Sbjct: 104 VGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVM-QNNF 162
Query: 121 LELAGAQVEVKKAEPKK 137
EL G +VEVK+A PK+
Sbjct: 163 YELNGKRVEVKRAVPKE 179
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D T +PRGFGF+T+ V+ V+++ + +NGK+VE+KR +PK A
Sbjct: 132 MHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKEA 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ E +D+F ++G V E I RD + GFGF+TF ++ L
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G +VEVK+A K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP VD+VI+ HI++GK ++ KR I A +D + KIF
Sbjct: 204 MRDSATGRSRGFGFLTFEDPKSVDEVIKVDHILDGKLIDPKRAI---AREEQD-RVGKIF 259
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V E EF DFF Q+G + + Q+M D T RSRGFGFIT+D+ AVD + NK
Sbjct: 260 VGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRSRGFGFITYDSPDAVDRVTV--NK 317
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+AEP+
Sbjct: 318 YLSLKGRAMEVKRAEPR 334
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E+ +D+F ++G+V ++ IMRD +T RSRGFGF+TF+ ++VD+++
Sbjct: 173 KMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIKV 232
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 233 DHILD--GKLIDPKRA 246
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD + AV+ L++
Sbjct: 87 VGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSR--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ +D+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 58 MRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLDGKIIDPKRAIPR----EEQERTSKIF 113
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F +FF FG V + +M D T R RGFGF+TFD + AVD L +
Sbjct: 114 VGGVSQEATEEDFTNFFKSFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRQ--P 171
Query: 121 LELAGAQVEVKKAEPK 136
L++ G +EVK+A+P+
Sbjct: 172 LQILGKPIEVKRAQPR 187
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
+ KD+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K + L+ G ++
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLD--GKIIDP 97
Query: 131 KKAEPKK 137
K+A P++
Sbjct: 98 KRAIPRE 104
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ DP+ VDKV+ ++ H ++GK+++ K PK A KTKK+
Sbjct: 62 MRDPATKRARGFGFITFTDPASVDKVLAQELHELDGKKIDPKVAFPKKAQSKMIIKTKKV 121
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ K++F Q+G V++ +M D +T R RGFGFITFD + V D + + +
Sbjct: 122 FIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDD-VSDKVCEIH 180
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 181 FHEINGKMVECKKAQPKEVMLP 202
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +VD +LA+
Sbjct: 31 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLAQ 90
Query: 118 GNKLELAGAQVEVKKAEPKK 137
EL G +++ K A PKK
Sbjct: 91 ELH-ELDGKKIDPKVAFPKK 109
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 29 MRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 84
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD + AV+ L++
Sbjct: 85 VGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSR--P 142
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 143 LEILGKPIEVKKAQPR 158
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 64 IPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 123
I S++ + +D+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K + L+
Sbjct: 4 INPSLHIESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLD- 62
Query: 124 AGAQVEVKKAEPK 136
G ++ K+A P+
Sbjct: 63 -GKIIDPKRAIPR 74
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSATGRSRGFGFLTFKDPKTVNTVMVKEHFLDGKIIDPKRAIPR----DEQEKTAKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F+ FF QFG V + +M D T R RGFGF+TFD++ AV+ L + +
Sbjct: 87 VGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCL-EYHP 145
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVK+A+P+
Sbjct: 146 LEILGKPIEVKRAQPR 161
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HFLD--GKIIDPKRAIPR 76
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT-KK 58
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H+++G+ ++ K P+ K + K
Sbjct: 45 MKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYPK 104
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ + AVD +A+
Sbjct: 105 VFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE- 163
Query: 119 NKLELAGAQVEVKKAEPKKPN 139
+ + L+G QVE+KKAEP+ N
Sbjct: 164 HFVNLSGKQVEIKKAEPRDSN 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V+ +L
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G + L G ++ K P+ P+
Sbjct: 74 GPHV-LDGRTIDPKPCNPRTLQKPK 97
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ADP+ V+KV+ D H ++GK+++ K PK A KTKK+
Sbjct: 76 MRDPATKRARGFGFITFADPASVEKVLAHDQHELDGKKIDPKVAFPKRAQPKMIIKTKKV 135
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ +++F Q+G V++ +M D +T R RGFGFITFD + V D + + +
Sbjct: 136 FIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDD-VSDKVCEIH 194
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 195 FHEINGKMVECKKAQPKEVMLP 216
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +V+ +LA
Sbjct: 45 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAH 104
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL G +++ K A PK+
Sbjct: 105 -DQHELDGKKIDPKVAFPKR 123
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
Query: 9 PRG-FGFVTYADPSVVDKVIEDT--HIINGKQVEIKRTIPKGA-----VGSKDFKTKKIF 60
PRG FGFVT+AD + + + ++D H I G++VE+KR + KG G+ +F +KKIF
Sbjct: 44 PRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIF 103
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ S++ E+EFK++F +FG + + +M D +T R RGFGFITF++E++V+ ++ + N
Sbjct: 104 VGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVM-QNNF 162
Query: 121 LELAGAQVEVKKAEPKK 137
EL G +VEVK+A PK+
Sbjct: 163 YELNGKRVEVKRAVPKE 179
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D T +PRGFGF+T+ V+ V+++ + +NGK+VE+KR +PK A
Sbjct: 132 MHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKEA 180
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ E +D+F ++G V E I RD + GFGF+TF ++ L
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G +VEVK+A K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 191 MKDTNTGRSRGFGFLTFDSSSSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF Q+G + + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ G ++E+K+AEP+
Sbjct: 306 IDFKGKKIEIKRAEPR 321
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +D+F ++G V + +IM+D +T RSRGFGF+TFD+ +VD+++
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 220 QHILD--GKVIDPKRAIPRE 237
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V V+ H ++GK ++ KR IP+ + KT K+F
Sbjct: 152 MRDSTTGRSRGFGFLTFKDPKCVQVVMSKEHHLDGKIIDPKRAIPR----EEQEKTAKMF 207
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P+ E+EF+DFF QFG V + +M D T R RGFGF+TF+ E AV++ +++
Sbjct: 208 VGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPY- 266
Query: 121 LELAGAQVEVKKAEPK 136
+ + G VEVK+A PK
Sbjct: 267 ITIHGKPVEVKRATPK 282
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +D+F QFG+V + +MRD +T RSRGFGF+TF + V +++K
Sbjct: 121 KMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSK 180
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 181 EHHLD--GKIIDPKRAIPRE 198
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT-KK 58
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H+++G+ ++ K P+ K + K
Sbjct: 45 MKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYPK 104
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ + AVD +A+
Sbjct: 105 VFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAE- 163
Query: 119 NKLELAGAQVEVKKAEPKKPN 139
+ + L+G QVE+KKAEP+ N
Sbjct: 164 HFVNLSGKQVEIKKAEPRDSN 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V+ +L
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G + L G ++ K P+ P+
Sbjct: 74 GPHV-LDGRTIDPKPCNPRTLQKPK 97
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK++FMQFG V + +M D T R RGFGF+TFD+E AVD L +
Sbjct: 87 VGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACL--DSP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKD+F QFG V + +M D T R RGFGF+TF++E VD L+
Sbjct: 87 VGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLSTS-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HFLD--GKIIDPKRAIPR 76
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + VD + + I+GK +E+K+ P+G + ++
Sbjct: 115 MMDKDTGRPRGFGFVTFESEAGVDACLSTSLEIHGKPIEVKKAQPRGNLREEE 167
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 139 MRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPR----EEQERTSKIF 194
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F +FF QFG V + +M D T R RGFGF+TFD + AVD L +G
Sbjct: 195 VGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATL-RG-P 252
Query: 121 LELAGAQVEVKKAEPK 136
L++ G Q+EVK+A+P+
Sbjct: 253 LQILGKQIEVKRAQPR 268
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED K +F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 167
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 168 EHYLD--GKIIDPKRAIPRE 185
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 92/139 (66%), Gaps = 11/139 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--K 58
MKD TG+ RGFGF+T+ DPS VD VI+ HI++GK ++ KR I S++ + + K
Sbjct: 225 MKDNATGRSRGFGFLTFKDPSAVDVVIKQDHILDGKLIDPKRAI------SREDQDRVGK 278
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IF+GGI V+E EF +FF +FG + + Q+M D T RSRGFGFITFD+ AVD +
Sbjct: 279 IFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCV-- 336
Query: 119 NK-LELAGAQVEVKKAEPK 136
NK L L G +EVK+A P+
Sbjct: 337 NKYLTLKGKAMEVKRAAPR 355
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ ++F +FG++ ++ IM+D++T RSRGFGF+TF AVD ++ +
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 253
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 254 DHILD--GKLIDPKRA 267
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+DR+T +PRGFGF+T+ DP+ ++H I+G+Q++ K ++P G G + ++KKIF
Sbjct: 93 MRDRQTRRPRGFGFITFTDPAAAQAACAESHTIDGRQIDAKPSVPHGE-GGQQPRSKKIF 151
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + K +F Q+G V E +M DH++ RSRGFGF+TF E +V+ + A G
Sbjct: 152 VGGLAPDTEDVHLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFAAGQM 211
Query: 121 LELAGAQVEVKKAEPK 136
EL G QVEVK A PK
Sbjct: 212 HELGGKQVEVKSATPK 227
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
K+F+GG+ E++ K++F+++G+V + +MRD T R RGFGFITF
Sbjct: 62 KLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITF 109
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 92/139 (66%), Gaps = 11/139 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--K 58
MKD TG+ RGFGF+T+ DP+ VD +++D HI++GK ++ KR I SK+ + K K
Sbjct: 175 MKDNATGRSRGFGFLTFKDPASVDALLKDRHILDGKLIDPKRAI------SKEDQEKVGK 228
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IF+GGI V E EF +FF QFG + + Q+M D T RSRGFGFIT+D+ AVD +
Sbjct: 229 IFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDRVCV-- 286
Query: 119 NK-LELAGAQVEVKKAEPK 136
NK L L G +EVK+A P+
Sbjct: 287 NKYLTLKGKAMEVKRAAPR 305
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K F+GG+ E++ + F ++G++ ++ IM+D++T RSRGFGF+TF +VD LL
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 204 RHILD--GKLIDPKRA 217
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGF+TY P+ VD+V + ++ + GK +E+KR P+G
Sbjct: 259 MIDKDTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKRAAPRG 306
>gi|224067168|ref|XP_002302389.1| predicted protein [Populus trichocarpa]
gi|222844115|gb|EEE81662.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 15/143 (10%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG--------SKD 53
KD+ T PRGFGFV ++DPS + ++D H+I G RT+ +G +K+
Sbjct: 36 KDKITKFPRGFGFVVFSDPSSAARALQDNHVILG------RTVTSNGLGMNSDNSTSAKN 89
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+TKKIFVGG+ SS+ E++FK++F QFG + +M+D T+R RGFGF+TFD+E++VD
Sbjct: 90 NRTKKIFVGGLASSLTEEQFKNYFEQFGRTVDVVVMQDSLTNRPRGFGFVTFDSEESVDK 149
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
+L G+ EL G +VEVKKA PK
Sbjct: 150 VLLIGSH-ELNGKRVEVKKAVPK 171
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPK 46
M+D T +PRGFGFVT+ VDKV+ +H +NGK+VE+K+ +PK
Sbjct: 125 MQDSLTNRPRGFGFVTFDSEESVDKVLLIGSHELNGKRVEVKKAVPK 171
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
K+FVGGI +E+ +++F ++G V +D T RGFGF+ F
Sbjct: 4 KLFVGGISRETSEETLRNYFSKYGVVSHSLTAKDKITKFPRGFGFVVF 51
>gi|242069255|ref|XP_002449904.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
gi|241935747|gb|EES08892.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
Length = 450
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 113/220 (51%), Gaps = 39/220 (17%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+DR TG+ RGFGF+ +ADP+V VI + H+I+G+ VE K+ I + S +
Sbjct: 38 MRDRATGRSRGFGFIMFADPAVAKHVIMEKHMIDGRMVEAKKAIARDDHHSLNNIHGSAH 97
Query: 55 ------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
KKIFVGG+ S+V +++ F QFG + + ++ DH T R RGFGFIT+D+E
Sbjct: 98 GLQRPKHRKKIFVGGLASNVTKEDVIKHFKQFGTIIDVVVVYDHHTQRPRGFGFITYDSE 157
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS---------------------YRR 147
AV L K + +L G VEVK+A K+P+ P PS Y +
Sbjct: 158 DAVHRALIKTFQ-KLKGKMVEVKRAIRKEPS-PIPSMCSPINGFNYVTGRANSFLNGYTQ 215
Query: 148 YNNPKPA--YGSGFGDAYGGYGGGGFAGG--GFGGSGGGG 183
+ N P YG + +G GG G FGGS G G
Sbjct: 216 HYNMSPLGGYGMRMDECFGLLSGGNTNNGYPSFGGSHGIG 255
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI NED +F ++G+V+E +MRD +T RSRGFGFI F ++ +
Sbjct: 7 KLFIGGISWDTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFADPAVAKHVIME 66
Query: 118 GNKLELAGAQVEVKKA 133
+ ++ G VE KKA
Sbjct: 67 KHMID--GRMVEAKKA 80
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 186 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 241
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D + R RGFGF+TFD+E AV+ L+
Sbjct: 242 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS--GP 299
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 300 LEILGKPIEVKKAQPR 315
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+
Sbjct: 150 DDAPDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVN 209
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
++ K + L+ G ++ K+A P+
Sbjct: 210 TVMVKEHYLD--GKIIDPKRAIPR 231
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ +G+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 270 MIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQPRGNMRDED 322
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ S VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 202 MKDNNTGKSRGFGFLTFEKSSSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 257
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GGI + V EF++FF ++G++ + Q+M D T RSRGFGF+T+D+ AV D + +
Sbjct: 258 IGGIGADVRPKEFEEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQHKF 316
Query: 121 LELAGAQVEVKKAEPK 136
+E G Q+E+K+A+P+
Sbjct: 317 IEFKGKQIEIKRAQPR 332
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
SKD + K+F+GG+ ED +D+F ++G+V + +IM+D++T +SRGFGF+TF+ +
Sbjct: 166 SKD--SCKMFIGGLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTFEKSSS 223
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKK 137
VD+++ + L+ G ++ K+A P++
Sbjct: 224 VDEVVKTQHILD--GKVIDPKRAIPRE 248
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 79 MRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 134
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKD+F QFG V + +M D T R RGFGF+TF++E+ VD L
Sbjct: 135 VGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLK--TH 192
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 193 LEIHGKPIEVKKAQPR 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ +
Sbjct: 45 RDTKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIV 104
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
+ K + L+ G ++ K+A P+
Sbjct: 105 MVKEHFLD--GKIIDPKRAIPR 124
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 91/137 (66%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ DP+ VD VI++ HI++GK ++ KR I A +D + KIF
Sbjct: 236 MKDNATGRSRGFGFLTFKDPASVDAVIKEEHILDGKLIDPKRAI---AREDQD-RVGKIF 291
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V E EF +FF +FG + + Q+M D T RSRGFGFIT+D+ AVD + NK
Sbjct: 292 VGGIDPMVTEREFNEFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCV--NK 349
Query: 121 -LELAGAQVEVKKAEPK 136
L L G +EVK+A P+
Sbjct: 350 YLTLKGKAMEVKRAAPR 366
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ + F ++G+V ++ IM+D++T RSRGFGF+TF +VD ++ +
Sbjct: 205 KMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVIKE 264
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 265 EHILD--GKLIDPKRA 278
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGF+TY P VDKV + ++ + GK +E+KR P+G
Sbjct: 320 MIDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKRAAPRG 367
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 93/137 (67%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ + VD+V++ H+++GK ++ KR IP+ KT KIF
Sbjct: 185 MRDNATGRSRGFGFLTFTKTASVDEVLKKQHVLDGKLIDPKRAIPREEQD----KTGKIF 240
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V E++F D+F QFG + + Q+M D T RSRGFGF+T+D+ AVD + A NK
Sbjct: 241 VGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCA--NK 298
Query: 121 -LELAGAQVEVKKAEPK 136
+ L G +E+K+AEP+
Sbjct: 299 YVPLKGRSMEIKRAEPR 315
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ +++F QFGD+ + IMRD++T RSRGFGF+TF +VD++L K
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKK 213
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 214 QHVLD--GKLIDPKRAIPRE 231
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGFVTY P VD+V + ++ + G+ +EIKR P+
Sbjct: 269 MIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAEPRN 316
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFKD+F QFG V + +M D T R RGFGF+TF++E V+ L+
Sbjct: 87 VGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSTS-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HFLD--GKIIDPKRAIPR 76
>gi|255585793|ref|XP_002533576.1| RNA binding protein, putative [Ricinus communis]
gi|223526553|gb|EEF28811.1| RNA binding protein, putative [Ricinus communis]
Length = 284
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-------- 52
+ D++TG RGFGFVT+ D S D D H I GK+V++K P+ +
Sbjct: 38 VMDKETGSSRGFGFVTFEDHSAADTAFRDQHFILGKKVDVKWATPRNPCHNSQEQNTIDP 97
Query: 53 ------------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGF 100
+ +TKKIFVGG+P ++ +EFKDFF FG V++ +M + T RSRGF
Sbjct: 98 IQSNGDENDNRIELRTKKIFVGGLPHDISNEEFKDFFSTFGTVRDAVVMYNGVTGRSRGF 157
Query: 101 GFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 160
GF+TFD+E + D +L + +L Q+EVK A+P+ N Q P YGS
Sbjct: 158 GFVTFDSEDSADTVL-RNKYYQLKDCQIEVKMAKPRSENDKQSQSHNQMVPYYLYGSEIP 216
Query: 161 DAYGGYGGGGFAGGGFGGSG-----GGGGGGGYRSSGAYGVRG 198
Y A F G Y S+GAY +
Sbjct: 217 SLYLVLADDRQATPPFININGYNYYGPNSMFRYYSNGAYYINN 259
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S + D F ++G V+E I+ D T SRGFGF+TF+ A D A
Sbjct: 7 KLFVGGLNSKTDGDYLNLHFSKYGQVKETLIVMDKETGSSRGFGFVTFEDHSAAD--TAF 64
Query: 118 GNKLELAGAQVEVKKAEPKKP 138
++ + G +V+VK A P+ P
Sbjct: 65 RDQHFILGKKVDVKWATPRNP 85
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 71 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 130
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 131 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 189
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 190 FHEINNKMVECKKAQPKEVMLP 211
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 99
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 100 GTH-ELDGKKVDPKVAFPRR 118
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 421 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 476
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E VD LA
Sbjct: 477 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLA--TP 534
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 535 LEIHGKPIEVKKAQPR 550
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
T+K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++
Sbjct: 388 TRKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNIVM 447
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K+A P+
Sbjct: 448 VKEHYLD--GKIIDPKRAIPR 466
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ PS VD+V++ HI++GK ++ KR+IPK + K KIF
Sbjct: 229 MKDGATGRSRGFGFLTFEHPSSVDEVVKTQHILDGKVIDPKRSIPK----EEQDKIGKIF 284
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI + V EF++FF QFG + + Q+M D T RSRGFGFIT+D+ AVD + +
Sbjct: 285 VGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDK-VCQNKY 343
Query: 121 LELAGAQVEVKKAE 134
++ G Q+EVK+A+
Sbjct: 344 IDFKGKQIEVKRAQ 357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
SKD + K+F+GG+ ED +++F ++G+V E +IM+D +T RSRGFGF+TF+ +
Sbjct: 193 SKD--SCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSS 250
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKK 137
VD+++ + L+ G ++ K++ PK+
Sbjct: 251 VDEVVKTQHILD--GKVIDPKRSIPKE 275
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 61 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 120
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 179
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 180 FHEINNKMVECKKAQPKEVMLP 201
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 90 GTH-ELDGKKVDPKVAFPRR 108
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ +P V++V+ H ++GK ++ KR IP+ + KT K+F
Sbjct: 195 MRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPR----EEQEKTAKMF 250
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+P E+EF++FF QFG V + +M D T R RGFGF+T++ E AV+ +++
Sbjct: 251 VGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQP-Y 309
Query: 121 LELAGAQVEVKKAEPK 136
+ + G VEVK+A PK
Sbjct: 310 ITIHGKPVEVKRATPK 325
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ +D +D+F QFG+V + +MRD +T RSRGFGF+TF + V+++++K
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 224 EHHLD--GKIIDPKRAIPRE 241
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 75 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 134
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 135 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 193
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 194 FHEINNKMVECKKAQPKEVMLP 215
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 104 GTH-ELDGKKVDPKVAFPRR 122
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 61 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 120
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 179
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 180 FHEINNKMVECKKAQPKEVMLP 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 90 GTH-ELDGKKVDPKVAFPRR 108
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 62 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 121
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 122 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 180
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 181 FHEINNKMVECKKAQPKEVMLP 202
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 90
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 91 GTH-ELDGKKVDPKVAFPRR 109
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 75 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 134
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 135 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 193
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 194 FHEINNKMVECKKAQPKEVMLP 215
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 104 GTH-ELDGKKVDPKVAFPRR 122
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 11/139 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--K 58
MKD TG+ RGFGF+T+ D VD +++D H+++GK ++ KR I SK+ + K K
Sbjct: 194 MKDSATGRSRGFGFLTFEDAKSVDALLKDRHVLDGKLIDPKRAI------SKEDQEKVGK 247
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGI V E+EF +FF QFG + + Q+M D T RSRGFGF+T+D+ AVD +
Sbjct: 248 IFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV-- 305
Query: 119 NK-LELAGAQVEVKKAEPK 136
NK L L G +EVK+A P+
Sbjct: 306 NKYLTLKGKAMEVKRAAPR 324
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
++K F+GG+ E+ F ++G++ ++ IM+D +T RSRGFGF+TF+ ++VD LL
Sbjct: 161 SRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALL 220
Query: 116 AKGNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 221 KDRHVLD--GKLIDPKRA 236
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGFVTY P+ VDKV + ++ + GK +E+KR P+G
Sbjct: 278 MIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRG 325
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 88/143 (61%), Gaps = 13/143 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGK-------QVEIKRTIPKGAVGSKD 53
M+D +G+ RGFGF+T+ DP V+ V+ H ++ + +++ KR IP+ +
Sbjct: 31 MRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDARSFADQLYKIDPKRAIPR----DEQ 86
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+T KIFVGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV+
Sbjct: 87 ERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEA 146
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
L+ LE+ G +EVKKA+P+
Sbjct: 147 TLSV--PLEIHGKAIEVKKAQPR 167
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ ++ K +PK+
Sbjct: 61 HYLDARSFADQLYKIDPKR 79
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 122 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 180
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 181 KRGF----RDDRFKD 191
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNVVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E VD L+
Sbjct: 87 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLSAN-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F Q+G+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 61 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 120
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 179
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 180 FHEINNKMVECKKAQPKEVMLP 201
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 90 GTH-ELDGKKVDPKVAFPRR 108
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 73 MRDSATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 128
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFK++F QFG V + +M D T R RGFGF+TF++E V+ L+ +
Sbjct: 129 VGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFLTFESEAGVEACLS--TE 186
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 187 LEIHGKAIEVKKAQPR 202
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVK 101
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 102 EHYLD--GKIIDPKRAIPR 118
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 11/139 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--K 58
MKD TG+ RGFGF+T+ D VD +++D H+++GK ++ KR I SK+ + K K
Sbjct: 194 MKDSATGRSRGFGFLTFEDAKSVDALLKDRHVLDGKLIDPKRAI------SKEDQEKVGK 247
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGI V E+EF +FF QFG + + Q+M D T RSRGFGF+T+D+ AVD +
Sbjct: 248 IFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV-- 305
Query: 119 NK-LELAGAQVEVKKAEPK 136
NK L L G +EVK+A P+
Sbjct: 306 NKYLTLKGKAMEVKRAAPR 324
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
++K F+GG+ E+ F ++G++ ++ IM+D +T RSRGFGF+TF+ ++VD LL
Sbjct: 161 SRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALL 220
Query: 116 AKGNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 221 KDRHVLD--GKLIDPKRA 236
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGFVTY P+ VDKV + ++ + GK +E+KR P+G
Sbjct: 278 MIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRG 325
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 93/155 (60%), Gaps = 15/155 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGA----VGSKD-- 53
MKD+ T Q RGFGFV + DP+ V V+E H ++G+ ++ K P+G V +KD
Sbjct: 43 MKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKVRTKDGW 102
Query: 54 -------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
K+KKIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 103 KGSKADSNKSKKIFVGGIPHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 141
EQ+VD + + ++ G +VEVKKAEP+ N P
Sbjct: 163 AEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSNAP 196
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ +++F Q+G+V + IM+D +T++SRGFGF+ F V +L +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-E 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 71 TKPHNLDGRNIDPKPCTPR 89
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ + KT KIF
Sbjct: 162 MKDPNTGRSRGFGFLSFDAPSSVDEVVKTQHILDGKVIDPKRAIPR----EEQDKTGKIF 217
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + V EF+++F Q+G + + Q+M D T RSRGFGF+T+D+ A + + +
Sbjct: 218 VGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEK-VCESRY 276
Query: 121 LELAGAQVEVKKAEPK 136
E G Q+E+K+AEP+
Sbjct: 277 REFKGKQIEIKRAEPR 292
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G+V E +IM+D +T RSRGFGF++FD +VD+++
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 191 QHILD--GKVIDPKRAIPRE 208
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDAKTVNTVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L++
Sbjct: 87 VGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ--P 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + V+ + I GK +E+K+ P+G + ++
Sbjct: 115 MIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQPRGNMREEE 167
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ TH ++GK+V+ K P+ A +TKKI
Sbjct: 61 MKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKI 120
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 179
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 180 FHEINNKMVECKKAQPKEVMLP 201
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F ++GD+ E +M+D +T RSRGFGF+TF +VD +L +
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +V+ K A P++
Sbjct: 90 GTH-ELDGKKVDPKVAFPRR 108
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D+ T + RGFGF+T+ DP+ V+KV+ + H ++ K+++ K PK + K +TKKI
Sbjct: 53 MRDQATKRSRGFGFITFRDPASVEKVLAQAAHELDQKKIDPKVAFPKRS-HPKVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ D+ K+ F Q+G V+E Q+M D T+R RGFGF+TFD+E VD + + +
Sbjct: 112 FVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDK-ICEIH 170
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 171 FHEVNSKMVECKKAQPKE 188
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ D +++F +FG+V E +MRD +T RSRGFGFITF +V+ +LA+
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
EL +++ K A PK+
Sbjct: 82 AAH-ELDQKKIDPKVAFPKR 100
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 134 MRDGATGRSRGFGFLTFRDPKTVNIVMVKEHYLDGKIIDPKRAIPR----EEQEKTAKIF 189
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FF QFG V + +M D T R RGFGF+TFD E AVD L
Sbjct: 190 VGGVSQEATEQDFKSFFEQFGRVIDATLMMDKDTGRPRGFGFVTFDGEAAVDACLQ--GP 247
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 248 LAILGKPIEVKRAQPR 263
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK 162
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 163 EHYLD--GKIIDPKRAIPRE 180
>gi|261488362|emb|CBH19556.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 156
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 69/83 (83%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D+ T QPRGFG +TY++P+VVD+V++D H NGKQVEIKRTIPK +V SKDFKTKKIF
Sbjct: 55 MRDKHTSQPRGFGVITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIF 114
Query: 61 VGGIPSSVNEDEFKDFFMQFGDV 83
VGG+P + ED+FK FF ++G V
Sbjct: 115 VGGLPQAQAEDDFKHFFQKYGPV 137
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+P E +F F Q+G++ + IMRD TS+ RGFG IT+ VD ++
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGVITYSNPAVVDRVMDD 83
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ E G QVE+K+ PK
Sbjct: 84 IH--EFNGKQVEIKRTIPK 100
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ S VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 225 MKDNATGRSRGFGFLTFELSSSVDEVVKTQHILDGKVIDPKRAIPREEQD----KTGKIF 280
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+D+ +AV D + +
Sbjct: 281 VGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAV-DRVCQNKY 339
Query: 121 LELAGAQVEVKKAEPK 136
++ G Q+E+K+A P+
Sbjct: 340 IDFKGKQIEIKRAAPR 355
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED+ KD+F ++G+V + +IM+D++T RSRGFGF+TF+ +VD+++
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 254 QHILD--GKVIDPKRAIPRE 271
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 11/139 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTK--K 58
MKD TG+ RGFGF+T+ D VD +++D H+++GK ++ KR I SK+ + K K
Sbjct: 218 MKDSATGRSRGFGFLTFEDAKSVDALLKDRHVLDGKLIDPKRAI------SKEDQEKVGK 271
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
IFVGGI V E+EF +FF QFG + + Q+M D T RSRGFGF+T+D+ AVD +
Sbjct: 272 IFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV-- 329
Query: 119 NK-LELAGAQVEVKKAEPK 136
NK L L G +EVK+A P+
Sbjct: 330 NKYLTLKGKAMEVKRAAPR 348
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
++K F+GG+ E+ F ++G++ ++ IM+D +T RSRGFGF+TF+ ++VD LL
Sbjct: 185 SRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALL 244
Query: 116 AKGNKLELAGAQVEVKKA 133
+ L+ G ++ K+A
Sbjct: 245 KDRHVLD--GKLIDPKRA 260
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG 47
M D+ TG+ RGFGFVTY P+ VDKV + ++ + GK +E+KR P+G
Sbjct: 302 MIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRG 349
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 154 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 209
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ LA K
Sbjct: 210 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAA--K 267
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 268 LEIHGKPIEVKKAQPR 283
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 123 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK 182
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 183 EHYLD--GKIIDPKRAIPR 199
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ADP+ VDKV+ TH ++GK+++ K P+ +TKKI
Sbjct: 54 MKDPTTRRSRGFGFITFADPASVDKVLAQGTHELDGKKIDPKVAFPRRTHPKMVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K++F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 114 FVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 173 FHEINNKMVECKKAQPKEVMLP 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +++F ++GD+ E +M+D +T RSRGFGFITF +VD +LA+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +++ K A P++
Sbjct: 83 GTH-ELDGKKIDPKVAFPRR 101
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDHFSGKSRGFGFLTFRDPKCVNAVMAKEHYLDGKIIDPKRAIPR----EEQDKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ S V E+++K FF Q+G V + Q+M D + R RGFGF+TFD+EQA++ +LA+
Sbjct: 87 VGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAMNTILAQP-L 145
Query: 121 LELAGAQVEVKKAE 134
L L +EVK+AE
Sbjct: 146 LILKDKPIEVKRAE 159
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ ++F QFG+V E +MRDH + +SRGFGF+TF + V+ ++AK
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAKE 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 61 HYLD--GKIIDPKRAIPRE 77
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK +FMQFG V + +M D T R RGFGF+TFD+E AV+ L
Sbjct: 87 VGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLE--GP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEILGKPIEVKKAQPR 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 200 MRDGPTGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 255
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +F+++F QFG V + +M D T R RGFGF+TFD+E AV++ L
Sbjct: 256 VGGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENAL-NCPT 314
Query: 121 LELAGAQVEVKKAEPK 136
L + +EVKKA+P+
Sbjct: 315 LAILDKPIEVKKAQPR 330
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 48 AVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
A GS K K+F+GG+ ++ K++F Q+G+V E +MRD T RSRGFGF+TF
Sbjct: 158 ATGSPAIKEDGKMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFK 217
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ V+ ++ K + L+ G ++ K+A P+
Sbjct: 218 DPKTVNIVMVKEHYLD--GKIIDPKRAIPR 245
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ DP+ VDKV+ TH ++GK+++ K P+ A +TKKI
Sbjct: 154 MKDPATRRSRGFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKI 213
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 214 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 272
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 273 FHEINNKMVECKKAQPKEVMLP 294
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +++F ++GD+ E +M+D +T RSRGFGFITF +VD +LA+
Sbjct: 123 KMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQ 182
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +++ K A P++
Sbjct: 183 GTH-ELDGKKIDPKVAFPRR 201
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGF F+T+ D VD+V++ H+++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDTATGRSRGFAFLTFKDSKSVDEVLKQKHVLDGKLIDPKRAIPR----EEQDKTGKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF D+F QFGD+ + Q+M D T +SRG+GF+T+D+ AV + +
Sbjct: 87 VGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAV-ARVTRNKY 145
Query: 121 LELAGAQVEVKKAEPK 136
+ G Q+E+KKAEP+
Sbjct: 146 VMFHGRQMEIKKAEPR 161
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ +E+ +F QFG+V E IMRD +T RSRGF F+TF ++VD++L +
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDEVLKQK 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 61 HVLD--GKLIDPKRAIPRE 77
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ADP+ VDKV+ H ++GK+++ K P+ +TKKI
Sbjct: 54 MKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K++F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 114 FVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 173 FHEINNKMVECKKAQPKEVMLP 194
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +++F ++GD+ E +M+D +T RSRGFGFITF +VD +LA+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
GN EL G +++ K A P++
Sbjct: 83 GNH-ELDGKKIDPKVAFPRR 101
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFK-TKK 58
MK+ ++G+ RGFGFVT+ADP+ V V+++ H+++G+ ++ K P+ K K
Sbjct: 51 MKNTESGRSRGFGFVTFADPTNVGVVLQNGPHVLDGRTIDPKPCNPRTLSKPKRNNGYPK 110
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+PS+V E + + FFM++G V E IM D +SRGFGF++F+ E AV+ +A
Sbjct: 111 VFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVAD- 169
Query: 119 NKLELAGAQVEVKKAEPK 136
+ + L G QVE+KKAEP+
Sbjct: 170 HFVNLHGKQVEIKKAEPR 187
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++GDV + +M++ + RSRGFGF+TF V +L
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G + L G ++ K P+ + P+
Sbjct: 80 GPHV-LDGRTIDPKPCNPRTLSKPK 103
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 148 MRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 203
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+DFF QFG V + +M D T R RGFGF+TF++E VD+ ++
Sbjct: 204 VGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCISI--P 261
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVK+A+P+
Sbjct: 262 LEIHGKPIEVKRAQPR 277
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 176
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 177 EHYLD--GKIIDPKRAIPR 193
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + VD I I+GK +E+KR P+G + ++ K+
Sbjct: 232 MMDKDTGRPRGFGFVTFESEAGVDNCISIPLEIHGKPIEVKRAQPRGNLREEEEAAKR 289
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 94/140 (67%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFK---T 56
MK+ ++G+ RGFGFVT++DP+ V+ V+++ H ++G+ ++ K P+ K K
Sbjct: 47 MKNAESGRSRGFGFVTFSDPANVNTVLQNGPHTLDGRTIDPKPCNPRTLQKPK--KGGGY 104
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E++VD ++
Sbjct: 105 PKVFLGGLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVS 164
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+KKAEP+
Sbjct: 165 E-HFVNLNGKQVEIKKAEPR 183
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +D + FF ++G+V + +M++ + RSRGFGF+TF V+ +L
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 76 GPHT-LDGRTIDPKPCNPRTLQKPK 99
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV----GSKDFKT 56
MKD+ TGQPRGFGFVT+AD + +D+V+++TH ++G+ VE+KR IP+ GS +
Sbjct: 50 MKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRSVEVKRAIPREKTAPGGGS---RL 106
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
KKIFVGG+ +V E +F+ +F +FG + + +M D T RSRGFGFITF+ E
Sbjct: 107 KKIFVGGLAPTVTEQDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEE 158
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED + F ++G + + +M+D T + RGFGF+TF A+D +L +
Sbjct: 19 KLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGFGFVTFADATAIDRVLDE 78
Query: 118 GNKLELAGAQVEVKKAEPKKPNLP 141
+ L+ G VEVK+A P++ P
Sbjct: 79 THTLD--GRSVEVKRAIPREKTAP 100
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+T+ S VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 154 MKDPATGRSRGFGFLTFESASSVDEVVKTQHILDGKVIDPKRAIPREEQD----KTGKIF 209
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+DT AVD + NK
Sbjct: 210 VGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQ--NK 267
Query: 121 -LELAGAQVEVKKAEPK 136
++ G ++E+K+A P+
Sbjct: 268 FIDFKGRKIEIKRAAPR 284
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
Query: 42 RTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
RT+ A SKD + K+F+GG+ ED +D+F ++G V+E +IM+D +T RSRGFG
Sbjct: 111 RTV--KADLSKD--SCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFG 166
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F+TF++ +VD+++ + L+ G ++ K+A P++
Sbjct: 167 FLTFESASSVDEVVKTQHILD--GKVIDPKRAIPRE 200
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P+ VDKV++ H ++GK+++ K PK ++ KTKKI
Sbjct: 143 MKDPVTQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPKNRPKTQSNKTKKI 202
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 203 FVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 261
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 262 FHTIKNKKVECKKAQPKEAVAP 283
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ ++F FG V + IM+D T RSRGFGFITF +VD +L
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 172 PIH-TLDGKKIDPKHATPK 189
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 186 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRD----EQERTSKIF 241
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D + R RGFGF+TFD+E AV+ L+
Sbjct: 242 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS--GP 299
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 300 LEILGKPIEVKKAQPR 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 215 EHYLD--GKIIDPKRAIPR 231
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ +G+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 270 MIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQPRGNMRDED 322
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 134 MRDGASGRSRGFGFLTFKDARTVNVVMVKEHYLDGKIIDPKRAIPR----DEQERTSKIF 189
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +E +FK++FMQFG V + +M D T R RGFGF+TFD+E AVD +
Sbjct: 190 VGGVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACI--NIP 247
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 248 LEILGKPIEVKKAQPR 263
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK 162
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 163 EHYLD--GKIIDPKRAIPR 179
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ TG+PRGFGFVT+ + VD I I GK +E+K+ P+G V ++
Sbjct: 218 MMDKDTGRPRGFGFVTFDSEAAVDACINIPLEILGKPIEVKKAQPRGNVREEE 270
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT--- 56
MK+ +TG+ RGFGFVT+ADP VD+ +E+ H ++G+ ++ K P+ K +T
Sbjct: 50 MKNNETGRSRGFGFVTFADPDNVDRALENGPHTLDGRTIDPKPCNPRSLHKPK--RTGGY 107
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+P ++ E + + FF ++G+V E IM D +SRGFGF++F+ E AV+ A
Sbjct: 108 PKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATA 167
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + ++G QVE+KKAEP+
Sbjct: 168 E-HFVNISGKQVEIKKAEPR 186
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
A D + K+FVGG+ ++ + +F ++G+V + +M+++ T RSRGFGF+TF
Sbjct: 8 NAAELDDHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFA 67
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
VD L G L G ++ K P+ + P+
Sbjct: 68 DPDNVDRALENGPHT-LDGRTIDPKPCNPRSLHKPK 102
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 194 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 249
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 250 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 308
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 309 IDFKDRKIEIKRAEPR 324
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 163 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 222
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 223 QHILD--GKVIDPKRAIPR 239
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 19/163 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
M + +G+ RGFGFVT+ ++ V+ I++GK+V+ K+ P+ + S +
Sbjct: 68 MVEANSGRSRGFGFVTFVSHDALEAVLASKQIVDGKEVDCKKACPREVMNSNNGALPKAA 127
Query: 54 ----FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
F+T KIFVGG+P NE EF+++F +FG V E +M D +T++ RGFGFITF++
Sbjct: 128 QVGVFRTDKIFVGGLPDLTNE-EFREYFEKFGTVLEATLMVDKNTNKPRGFGFITFESPS 186
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKK-------PNLPQPSY 145
V++++ + N+ L G VEVKKA P++ N+P P +
Sbjct: 187 VVNEVIRRYNEHTLKGKWVEVKKATPRESFTKNSGKNMPSPVH 229
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+ SK K IFVGG+ ++ + F +G++ + +M + ++ RSRGFGF+TF +
Sbjct: 28 MASKVGKICHIFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGFVTFVSH 87
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
A++ +LA +K + G +V+ KKA P++
Sbjct: 88 DALEAVLA--SKQIVDGKEVDCKKACPRE 114
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ADP+ VDKV+ H ++GK+++ K P+ +TKKI
Sbjct: 54 MKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K++F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 114 FVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 173 FHEINNKMVECKKAQPKEVMLP 194
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +++F ++GD+ E +M+D +T RSRGFGFITF +VD +LA+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
GN EL G +++ K A P++
Sbjct: 83 GNH-ELDGKKIDPKVAFPRR 101
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 119 MRDSATGRSRGFGFLTFRDPKCVNIVMVKEHYLDGKIIDPKRAIPR----EEQERTSKIF 174
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F FF QFG V + +M D T R RGFGF+TFD + AVD L KG
Sbjct: 175 VGGVSQEATEEDFTAFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATL-KG-P 232
Query: 121 LELAGAQVEVKKAEPK 136
L++ G +EVK+A+P+
Sbjct: 233 LQILGKPIEVKRAQPR 248
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+P V + + +K+F+GG+ ED K +F QFG+V E +MRD +T RSRGFGF+
Sbjct: 75 VPLNQVNANS-QCRKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFL 133
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
TF + V+ ++ K + L+ G ++ K+A P++
Sbjct: 134 TFRDPKCVNIVMVKEHYLD--GKIIDPKRAIPRE 165
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D++TG+PRGFGFVT+ + VD ++ I GK +E+KR P+G + D
Sbjct: 203 MMDKETGRPRGFGFVTFDGDAAVDATLKGPLQILGKPIEVKRAQPRGNMRDDD 255
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ L+
Sbjct: 87 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSAN-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT+ADP+ V+KV+ + H ++GK+++ K PK A +TKK+
Sbjct: 54 MKDPTTRRSRGFGFVTFADPASVEKVLANGPHELDGKKIDPKIAFPKRAHPKMVTRTKKV 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K++F QFG +++ +M D T+R RGFGF+TF+ E VD + + +
Sbjct: 114 FVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDK-VCEVH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ +P
Sbjct: 173 FHEINNKMVECKKAQPKEVMMP 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +++F +FG++ E +M+D +T RSRGFGF+TF +V+ +LA
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +++ K A PK+
Sbjct: 83 GPH-ELDGKKIDPKIAFPKR 101
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT K+F
Sbjct: 31 MRDSSTGRSRGFGFLTFKDPKCVNTVMVKEHYLDGKIIDPKRAIPR----EEQEKTAKMF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ EDEF++FF FG V + +M D T R RGFGF+TF+++ AV++ +++
Sbjct: 87 VGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQP-Y 145
Query: 121 LELAGAQVEVKKAEPK 136
L + Q+EVK+A PK
Sbjct: 146 LAIHDKQIEVKRATPK 161
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + +F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 61 HYLD--GKIIDPKRAIPRE 77
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKGAVGSK 52
M D+ TG+PRGFGFVT+ + V+ + ++ I+ KQ+E+KR PKG + +
Sbjct: 115 MIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRATPKGNIKER 167
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P+ VDKV++ H ++GK+++ K PK ++ KTKKI
Sbjct: 214 MKDPVTQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPKNRPKTQSNKTKKI 273
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 274 FVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 332
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 333 FHTIKNKKVECKKAQPKE 350
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ ++F FG V + IM+D T RSRGFGFITF +VD +L
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 243 PIH-TLDGKKIDPKHATPK 260
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD+ T Q RGFGFV + DP+ V V+E H ++G+ ++ K P+G K
Sbjct: 43 MKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGW 102
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
K+KKIFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF+
Sbjct: 103 KGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFE 162
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 141
EQ+VD + + ++ G +VEVKKAEP+ P
Sbjct: 163 AEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAP 196
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ +++F Q+G+V + IM+D +T++SRGFGF+ F V +L +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-E 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 71 TKPHNLDGRNIDPKPCTPR 89
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 91 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 150 FHEINNKMVECKKAQPKEVMFP 171
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 HH-ELDSKTIDPKVAFPRR 78
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 98 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 157
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 158 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 216
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 217 FHEINNKMVECKKAQPKEVMFP 238
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++
Sbjct: 80 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDP 138
Query: 131 KKAEPKK 137
K A P++
Sbjct: 139 KVAFPRR 145
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 95/143 (66%), Gaps = 8/143 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFKTK-- 57
MK+ +TG+ RGFGF+T+ADP+ V V+++T HI++ + ++ K P+ + ++
Sbjct: 52 MKNPETGRSRGFGFITFADPNNVGLVLQNTPHILDNRTIDPKPCNPRAEMVRAPRRSMGT 111
Query: 58 ----KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
K+F+GG+PS++ E + ++FF Q+G V E IM D +SRGFGF+TF++E++VD
Sbjct: 112 GNGYKVFLGGLPSNLTETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDR 171
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
+ + + + G QVE+KKAEP+
Sbjct: 172 CTGE-HYVSINGKQVEIKKAEPR 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ D +F Q+G+V + +M++ T RSRGFGFITF V +L
Sbjct: 21 KMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVLQN 80
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L ++ K P+
Sbjct: 81 TPHI-LDNRTIDPKPCNPR 98
>gi|189210886|ref|XP_001941774.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977867|gb|EDU44493.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 442
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 14/148 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI-----------PKGAV 49
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK V TI PK A+
Sbjct: 1 MRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIVCKPSTITKLPANANEIDPKRAI 60
Query: 50 GSKDF-KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
++ +T KIFVGG+ E++F +FF QFG V + +M D T R RGFGF+TFD +
Sbjct: 61 PREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGD 120
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPK 136
AVD L + L++ G Q+EVK+A+P+
Sbjct: 121 AAVDATLRE--PLQILGKQIEVKRAQPR 146
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ LA
Sbjct: 87 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAAN-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 133 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHQLDGKLIDPKRAIPR----DEQERTAKIF 188
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK+FFM+FG V + +M D T R RGFGF+TFD + AV+ L
Sbjct: 189 VGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAVERTLE--GP 246
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 247 LSILGKPIEVKRAQPR 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K++F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 118 GNKLELAGAQVEVKKAEPK 136
++L+ G ++ K+A P+
Sbjct: 162 EHQLD--GKLIDPKRAIPR 178
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD +G+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 261 MKDANSGRSRGFGFLSFEHPSSVDEVVKSQHILDGKVIDPKRAIPREEQD----KTGKIF 316
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGFIT+D+ +AV D + +
Sbjct: 317 VGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAV-DRVCQNKY 375
Query: 121 LELAGAQVEVKKAEPK 136
++ Q+E+K+A P+
Sbjct: 376 IQFKDKQIEIKRAAPR 391
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E++ KD+F ++G+V + +IM+D ++ RSRGFGF++F+ +VD+++
Sbjct: 230 KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEVVKS 289
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 290 QHILD--GKVIDPKRAIPRE 307
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|315050188|ref|XP_003174468.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
gi|311339783|gb|EFQ98985.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
Length = 552
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 19/153 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTI---------------- 44
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK V + +I
Sbjct: 73 MRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIVWLAPSISGPLLGYFADREYKID 132
Query: 45 PKGAVG-SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
PK A+ + +T KIFVGG+ E EFK FFMQFG V + +M D T R RGFGF+
Sbjct: 133 PKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFV 192
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
TFD+E AV+ L+ LE+ G +EVKKA+P+
Sbjct: 193 TFDSEAAVEATLSV--PLEIHGKAIEVKKAQPR 223
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 66 SSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 122
SSV E +++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++ K + L+
Sbjct: 50 SSVAEKRSREYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLD 106
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 178 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 236
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 237 KRGF----RDDRFKD 247
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 186 MRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRD----EQERTSKIF 241
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK FFMQFG V + +M D + R RGFGF+TFD+E AV+ L+
Sbjct: 242 VGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLS--GP 299
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 300 LEILGKPIEVKKAQPR 315
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+VQE +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 215 EHYLD--GKIIDPKRAIPR 231
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D+ +G+PRGFGFVT+ + V+ + I GK +E+K+ P+G + +D
Sbjct: 270 MIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQPRGNMREED 322
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD+ T Q RGFGFV + DP+ V V+E H ++G+ ++ K P+G K
Sbjct: 43 MKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGW 102
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
K+KKIFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF+
Sbjct: 103 KGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 141
EQ+VD + + ++ G +VEVKKAEP+ P
Sbjct: 163 AEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAP 196
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ +++F Q+G+V + IM+D +T++SRGFGF+ F V +L +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-E 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 71 TKPHNLDGRNIDPKPCTPR 89
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ DP+ VDKV+ TH ++GK+++ K P+ A +TKKI
Sbjct: 18 MKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRRAHPKMVTRTKKI 77
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 78 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 136
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 137 FHEINNKMVECKKAQPKEVMLP 158
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+D+F +FG++ E +M+D +T RSRGFGFITF +VD +LA G EL G +++ K
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTH-ELDGKKIDPKV 60
Query: 133 AEPKK 137
A P++
Sbjct: 61 AFPRR 65
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 144 MRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 199
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E VD +
Sbjct: 200 VGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI--NVP 257
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 258 LEIHGKPIEVKKAQPR 273
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 43 TIPKGAVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
T P G V K K+F+GG+ + +D+F QFG+V E +MRD S+ RSRGFG
Sbjct: 97 TPPYGTVHKASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFG 156
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
F+TF + V+ ++ K + L+ G ++ K+A P+
Sbjct: 157 FLTFKDPKTVNIVMVKEHFLD--GKIIDPKRAIPR 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + VD I I+GK +E+K+ P+G + ++ +K+
Sbjct: 228 MMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASKR 285
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 91 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 150 FHEINNKMVECKKAQPKEVMFP 171
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 HH-ELDSKTIDPKVAFPRR 78
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 91 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 150 FHEINNKMVECKKAQPKEVMFP 171
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 HH-ELDSKTIDPKVAFPRR 78
>gi|148683899|gb|EDL15846.1| Musashi homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 296
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 3 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 62
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 63 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 121
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 122 FHEINNKMVECKKAQPKEVMFP 143
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 87 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+MRD +T RSRGFGF+TF +VD +L + + EL ++ K A P++
Sbjct: 1 MVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVAFPRR 50
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 46 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 101
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ L+
Sbjct: 102 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSAN-- 159
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 160 LEIHGKPIEVKKAQPR 175
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ + +D+F FG+V E +MRD +T RSRGFGF+TF + V+ ++
Sbjct: 14 RKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV 73
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K+A P+
Sbjct: 74 KEHYLD--GKIIDPKRAIPR 91
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 178 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 233
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 234 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 292
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 293 IDFKDRKIEIKRAEPR 308
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 147 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 206
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 207 QHILD--GKVIDPKRAIPR 223
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|149053819|gb|EDM05636.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 296
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 3 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 62
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 63 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 121
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 122 FHEINNKMVECKKAQPKEVMFP 143
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 87 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+MRD +T RSRGFGF+TF +VD +L + + EL ++ K A P++
Sbjct: 1 MVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVAFPRR 50
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 91 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 150 FHEINNKMVECKKAQPKEVMFP 171
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 HH-ELDSKTIDPKVAFPRR 78
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 33 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 92
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 93 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 151
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 152 FHEINNKMVECKKAQPKEVMFP 173
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 62 PHH-ELDSKTIDPKVAFPRR 80
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 20/154 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA-VGSKDF---- 54
MK+++TG+ RGFGFVT+ D VD V+ H I+G+QV+ K PK A G KD
Sbjct: 73 MKNQQTGKSRGFGFVTFNDAQCVDTVLSAAPHTIDGRQVDAKPCNPKAANKGPKDGGGRI 132
Query: 55 ------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
K KKIF+GG+P+ V+ED ++FF ++G V + IM D +SRGFGF
Sbjct: 133 HGGGGGGGGGGDKDKKIFMGGLPN-VDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGF 191
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+TF++E AVD + A+ + + + G QVE K+AEP+
Sbjct: 192 LTFESEDAVDQVCAE-HFININGKQVECKRAEPR 224
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
K KK+F+GG+ ++D +FF Q+G+V + +M++ T +SRGFGF+TF+ Q VD +
Sbjct: 39 KKKKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTV 98
Query: 115 LAKGNKLELAGAQVEVKKAEPKKPN 139
L+ + G QV+ K PK N
Sbjct: 99 LSAAPHT-IDGRQVDAKPCNPKAAN 122
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 32 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 91
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 92 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 150
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 151 FHEINNKMVECKKAQPKEVMFP 172
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 PHH-ELDSKTIDPKVAFPRR 79
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+ K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L
Sbjct: 16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ + EL ++ K A P++
Sbjct: 76 GQPHH-ELDSKTIDPKVAFPRR 96
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT--- 56
MK+ +TG+ RGFGFVT+ADP V++ +E+ H ++G+ ++ K P+ K +T
Sbjct: 51 MKNNETGRSRGFGFVTFADPENVERALENGPHTLDGRTIDPKPCNPRSLHKPK--RTGGY 108
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+P ++ E + + FF ++G+V E IM D +SRGFGF++F+ E AV+ A
Sbjct: 109 PKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATA 168
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + ++G QVE+KKAEP+
Sbjct: 169 E-HFVNISGKQVEIKKAEPR 187
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
A D + K+FVGG+ ++ + +F ++G+V + +M+++ T RSRGFGF+TF
Sbjct: 9 NAAELDDHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFA 68
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
+ V+ L G L G ++ K P+ + P+
Sbjct: 69 DPENVERALENGPHT-LDGRTIDPKPCNPRSLHKPK 103
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 171 FHEINNKMVECKKAQPKEVMFP 192
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 81 PHH-ELDSKTIDPKVAFPRR 99
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 193 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 248
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 249 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 307
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 308 IDFKDRKIEIKRAEPR 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 221
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 222 QHILD--GKVIDPKRAIPR 238
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ DPS VDKV+ + H ++GK+++ K PK KTKK+
Sbjct: 77 MRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKV 136
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ K +F +G V++ +M D +T R RGFGF+TFD+++ V D + + +
Sbjct: 137 FIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDE-VADKVCEIH 195
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 196 FHEINGKMVECKKAQPKEVMLP 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +VD +L
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVL-N 104
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL G +++ K A PK+
Sbjct: 105 NREHELDGKKIDPKVAFPKR 124
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 40 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 99
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 100 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 158
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 159 FHEINNKMVECKKAQPKEVMFP 180
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++ K
Sbjct: 24 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKV 82
Query: 133 AEPKK 137
A P++
Sbjct: 83 AFPRR 87
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 91 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 150 FHEINNKMVECKKAQPKEVMFP 171
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 61 HH-ELDSKTIDPKVAFPRR 78
>gi|384250217|gb|EIE23697.1| hypothetical protein COCSUDRAFT_8654, partial [Coccomyxa
subellipsoidea C-169]
Length = 175
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 7/135 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-----GAV--GSKDFK 55
DR TG+PRGFGFV + DP+V DKV+ H I+ ++VE K+ +PK G V S +
Sbjct: 41 DRHTGRPRGFGFVVFEDPAVADKVVSLQHTIDRREVEAKKAVPKEEHPSGRVLDSSNPQR 100
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
TKKIFVGG+ SV+E+ K +F +FG+V++ +M DH R RGFGFITF TE+AVD +
Sbjct: 101 TKKIFVGGLAPSVDENVLKGYFERFGEVEDAVVMYDHDNKRPRGFGFITFSTEEAVDGVF 160
Query: 116 AKGNKLELAGAQVEV 130
+ G L +E+
Sbjct: 161 SGGTMQTLHDKPIEI 175
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++++ + FF FG V E + D T R RGFGF+ F+ D +++
Sbjct: 8 KVFVGGLSWETSDEKLRAFFENFGTVLEAFVSYDRHTGRPRGFGFVVFEDPAVADKVVSL 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP 153
+ ++ +VE KKA PK+ + PS R ++ P
Sbjct: 68 QHTID--RREVEAKKAVPKEEH---PSGRVLDSSNP 98
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 91/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT--- 56
MK+ +TG+ RGFGFVT+ADP VD+ +E+ H ++G+ ++ K P+ K +T
Sbjct: 44 MKNNETGRSRGFGFVTFADPENVDRALENGPHTLDGRTIDPKPCNPRSQHKPK--RTGGY 101
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+P ++ E + + FF ++G+V E IM D +SRGFGF++F+ E AV +
Sbjct: 102 PKVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAV-ERAT 160
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + ++G QVEVKKAEP+
Sbjct: 161 TDHFVHISGKQVEVKKAEPR 180
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D + K+FVGG+ + + +F ++G+V + +M+++ T RSRGFGF+TF + VD
Sbjct: 8 DHEKGKLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVD 67
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
L G L G ++ K P+ + P+
Sbjct: 68 RALENGPHT-LDGRTIDPKPCNPRSQHKPK 96
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 20 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 79
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 80 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 138
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 139 FHEINNKMVECKKAQPKEVMFP 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDP 60
Query: 131 KKAEPKK 137
K A P++
Sbjct: 61 KVAFPRR 67
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+ K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L
Sbjct: 16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ + EL ++ K A P++
Sbjct: 76 GQPHH-ELDSKTIDPKVAFPRR 96
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 20 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 79
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 80 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 138
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 139 FHEINNKMVECKKAQPKEVMFP 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDP 60
Query: 131 KKAEPKK 137
K A P++
Sbjct: 61 KVAFPRR 67
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 21 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 80
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 81 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 139
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 140 FHEINNKMVECKKAQPKEVMFP 161
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++
Sbjct: 3 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDP 61
Query: 131 KKAEPKK 137
K A P++
Sbjct: 62 KVAFPRR 68
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+ K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L
Sbjct: 16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ + EL ++ K A P++
Sbjct: 76 GQPHH-ELDSKTIDPKVAFPRR 96
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD+ T Q RGFGFV + DP+ V V+E H ++G+ ++ K P+G K
Sbjct: 43 MKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGW 102
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
K+KKIFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF+
Sbjct: 103 KGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 141
EQ+VD + + ++ G +VEVKKAEP+ P
Sbjct: 163 AEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAP 196
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ +++F Q+G+V + IM+D +T++SRGFGF+ F V +L +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-E 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 71 TKPHNLDGRNIDPKPCTPR 89
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 35 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 94
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 95 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 153
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 154 YINLNGKQVEIKKAEPR 170
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 4 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 63
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 64 GPHT-LDGRTIDPKPCNPRTLQKPK 87
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 5/140 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGA---VGSKDFKT 56
M K GQ +GFGFVT+ADP+ VD V E H + GK ++ KR +G+ +G D +T
Sbjct: 39 MDKDKPGQNKGFGFVTFADPACVDDVTNEKNHNLEGKGLDCKRCKARGSEKRMGPGDQRT 98
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KK+FVGGI +++ + F G+V++ IM D T + RGFGF+T D+E+AV+ L+
Sbjct: 99 KKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLV- 157
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + LEL G +E+KKA+PK
Sbjct: 158 RMHHLELKGKSMEIKKAQPK 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS-RSRGFGFITFDTEQAVDDLLA 116
KIFVGG+ + + D F+ +F +FG + + +M D +++GFGF+TF VDD+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ N L G ++ K+ + +
Sbjct: 67 EKNH-NLEGKGLDCKRCKAR 85
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVTY DP+ VD +E+ HI++ K V+ K P+ A +TKKI
Sbjct: 57 MKDPTTKRSRGFGFVTYKDPASVDTCLENGPHILDNKTVDPKVAFPRKAQPKMVTRTKKI 116
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K++F Q+G +++ +M D +T+R RGFGF+TF+ E VD + + +
Sbjct: 117 FVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDK-VCEIH 175
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 176 FHEINKKMVECKKAQPKEVMLP 197
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD F +FG+++E +M+D +T RSRGFGF+T+ +VD L
Sbjct: 26 KMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVDTCLEN 85
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G + L V+ K A P+K
Sbjct: 86 GPHI-LDNKTVDPKVAFPRK 104
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 246
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 247 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 305
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 306 IDFKDRKIEIKRAEPR 321
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 220 QHILD--GKVIDPKRAIPR 236
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 48 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 107
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 108 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 166
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 167 FHEINNKMVECKKAQPKEVMFP 188
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K + S + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L
Sbjct: 15 SKNVLSVDXSSQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 74
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ + EL ++ K A P++
Sbjct: 75 GQPHH-ELDSKTIDPKVAFPRR 95
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 36 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 95
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 96 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 154
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 155 YINLNGKQVEIKKAEPR 171
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FV G+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 5 KLFVYGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 64
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 65 GPHT-LDGRTIDPKPCNPRTLQKPK 88
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ DPS VDKV+ H ++GK+++ K PK KTKK+
Sbjct: 66 MRDPATKRARGFGFITFVDPSSVDKVLHARDHELDGKKIDPKVAFPKRTQAKLVTKTKKV 125
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ K +F +G V++ +M D +T R RGFGF+TFD+++ V D + + +
Sbjct: 126 FIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDE-VADKVCEIH 184
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 185 FHEINGKMVECKKAQPKEVMLP 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +VD +L
Sbjct: 35 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHA 94
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL G +++ K A PK+
Sbjct: 95 RDH-ELDGKKIDPKVAFPKR 113
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F Q+G V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 152 MRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 207
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFK++F QFG V + +M D T R RGFGF+TF+ E VD +
Sbjct: 208 VGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI--NVP 265
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 266 LEIHGKPIEVKKAQPR 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 180
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 181 EHFLD--GKIIDPKRAIPR 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + + VD I I+GK +E+K+ P+G + ++ +++
Sbjct: 236 MMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASRR 293
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F Q+G V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 38 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 97
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 98 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 156
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 157 YINLNGKQVEIKKAEPR 173
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 67 GPHT-LDGRTIDPKPCNPRTLQKPK 90
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 135 MRDGATGRSRGFGFLTFKDPKNVNTVMVKEHSLDGKLIDPKRAIPR----DEQERTAKIF 190
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FKDFFM+FG V + +M D T R RGFGF+TFD+E AV+ L
Sbjct: 191 VGGVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAVERTLE--GP 248
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 249 LAILGKPIEVKRAQPR 264
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K +F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK 163
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 164 EHSLD--GKLIDPKRAIPR 180
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 68 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 127
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 128 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 186
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 187 FHEINNKMVECKKAQPKEVMFP 208
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 74 KDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
+D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++ K A
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVA 111
Query: 134 EPKK 137
P++
Sbjct: 112 FPRR 115
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD+ T Q RGFGFV + DP+ V V+E H ++G+ ++ K P+G K
Sbjct: 43 MKDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGW 102
Query: 55 --------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
K+KKIFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF+
Sbjct: 103 KGSKADSNKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFE 162
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLP 141
EQ+VD + + ++ G +VEVKKAEP+ P
Sbjct: 163 AEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAP 196
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ +++F Q+G+V + IM+D +T++SRGFGF+ F V +L +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL-E 70
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 71 TKPHNLDGRNIDPKPCTPR 89
>gi|443916694|gb|ELU37670.1| subunit of cleavage factor I [Rhizoctonia solani AG-1 IA]
Length = 435
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 29/224 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGF F+T+ DP+ V+ V+ H ++GK ++ KR IP+ ++ +T+K+F
Sbjct: 236 MRD-ASGRSRGFAFLTFEDPAAVNAVMVREHFLDGKIIDPKRAIPR----TEHARTQKLF 290
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ S+V + ++FF Q+G V + +M D +SRS+GFGF+TF+ + VD LL G
Sbjct: 291 VGGLASTVTSESMRNFFSQYGKVIDANVMVDRDSSRSKGFGFVTFEDQDGVDKLLQLG-P 349
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRR---YNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
LEL G +++K A+P+ +Y+R +NN G AY Y
Sbjct: 350 LELDGKLMDIKLAQPRG------TYQRNEGFNN------QGNDGAYNNYNNRH----PND 393
Query: 178 GSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMG 221
G GY +G R G +G +G G + YG YG G G
Sbjct: 394 QPKPRWNGHGYEWNG----RHGWHGWHGRHGRYERYGRYGNGHG 433
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E V+ L+
Sbjct: 87 VGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSAN-- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HYLD--GKIIDPKRAIPR 76
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 78 PHH-ELDSKTIDPKVAFPRR 96
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 38 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 97
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 98 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 156
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 157 YINLNGKQVEIKKAEPR 173
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 67 GPHT-LDGRTIDPKPCNPRTLQKPK 90
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ DP+ VDKV+ TH ++GK+++ K P+ A +TKKI
Sbjct: 18 MKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRRAHPKMVTRTKKI 77
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E VD + + +
Sbjct: 78 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIH 136
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 137 FHEINNKMVECKKAQPKEVMLP 158
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+D+F +FG++ E +M+D +T RSRGFGFITF +VD +LA G EL G +++ K
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTH-ELDGKKIDPKV 60
Query: 133 AEPKK 137
A P++
Sbjct: 61 AFPRR 65
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 89/154 (57%), Gaps = 19/154 (12%)
Query: 5 KTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGA--------------- 48
+TG+ RGFGFVT+ DPS V V+ H ++G+ V+ K P+ A
Sbjct: 45 ETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPRSASRPGGGGGPGARGGP 104
Query: 49 --VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
G T KIFVGG+P++V E + FF ++G V E IM D RSRGFGF++F+
Sbjct: 105 RGGGGGKGSTTKIFVGGLPATVTETDLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFE 164
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNL 140
TE AV+ L ++ +E++G QVE K+AEPK+ +
Sbjct: 165 TEDAVNQLTSR-RYVEISGKQVECKRAEPKESRM 197
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ ++ ++F +FG+V + +M + T RSRGFGF+TF V +LA
Sbjct: 11 KIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNE-TGRSRGFGFVTFRDPSCVATVLA- 68
Query: 118 GNKLELAGAQVEVKKAEPK 136
G +L G V+ K P+
Sbjct: 69 GGPHQLDGRTVDPKSCNPR 87
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPK 46
M D++ + RGFGFV++ V+++ ++ I+GKQVE KR PK
Sbjct: 147 MYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGKQVECKRAEPK 193
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 147 MRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDGKIIDPKRAIPR----DEQEKTSKIF 202
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF++FF QFG V + +M D T R RGFGF+TF++E VD +
Sbjct: 203 VGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACI--NIP 260
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVK+A+P+
Sbjct: 261 LEIHGKPIEVKRAQPR 276
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 176 EHYLD--GKIIDPKRAIPR 192
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 38 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 97
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 98 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 156
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 157 YINLNGKQVEIKKAEPR 173
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FV G+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 7 KLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 67 GPHT-LDGRTIDPKPCNPRTLQKPK 90
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P+ VDKV++ H ++GK+++ K PK ++ KTKKI
Sbjct: 134 MKDPITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKTKKI 193
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E + +F QFG V E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 194 FVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 252
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 253 FHTIKNKKVECKKAQPKE 270
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ ++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 103 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVL-K 161
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 162 VPIHTLDGKKIDPKHATPK 180
>gi|58262530|ref|XP_568675.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134119022|ref|XP_772014.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254618|gb|EAL17367.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230849|gb|AAW47158.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 480
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGF F+TY DP+ V KV+ TH ++GKQ++ KR IP+ ++ +T K+F
Sbjct: 144 MRD-PSGRSRGFAFLTYRDPASVTKVMAQTHHLDGKQIDPKRAIPR----AEHERTAKVF 198
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV + K F QFG V + +M D T RS+GF F TF E++V +A +
Sbjct: 199 VGGLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRAMA-ASG 257
Query: 121 LELAGAQVEVKKAEPK 136
+EL G Q+E+KKA+P+
Sbjct: 258 VELEGKQIEIKKAQPR 273
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E ++ QFG++ IMRD S RSRGF F+T+ +V ++A+
Sbjct: 113 KMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPS-GRSRGFAFLTYRDPASVTKVMAQ 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G Q++ K+A P+
Sbjct: 172 THHLD--GKQIDPKRAIPR 188
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG-AVGSK 52
M D++TG+ +GF F T+ D V + + + + + GKQ+EIK+ P+G A GSK
Sbjct: 227 MFDKETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQPRGTAQGSK 280
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPANVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 31 MRDSSSGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E VD +
Sbjct: 87 VGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACI--NVP 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 145 LEIHGKPIEVKKAQPR 160
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ + +D+F QFG+V E +MRD S+ RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 HFLD--GKIIDPKRAIPR 76
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + VD I I+GK +E+K+ P+G + ++ +K+
Sbjct: 115 MMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASKR 172
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 140 MRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 195
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+D+F QFG V + +M D T R RGFGF+TF++E V+ +
Sbjct: 196 VGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACI--NVP 253
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G VEVK+A+P+
Sbjct: 254 LEIHGKPVEVKRAQPR 269
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 43 TIPKGAVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
T P G V K K+F+GG+ + +++F QFG+V E +MRD +T RSRGFG
Sbjct: 93 TPPYGTVHKASAKDDGKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFG 152
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
F+TF + V+ ++ K + L+ G ++ K+A P+
Sbjct: 153 FLTFKDAKTVNIVMVKEHFLD--GKIIDPKRAIPR 185
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|321265756|ref|XP_003197594.1| subunit of cleavage factor I; Hrp1p [Cryptococcus gattii WM276]
gi|317464074|gb|ADV25807.1| Subunit of cleavage factor I, putative; Hrp1p [Cryptococcus gattii
WM276]
Length = 477
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGF F+TY DP+ V KV+ TH ++GKQ++ KR IP+ ++ +T K+F
Sbjct: 144 MRD-PSGRSRGFAFLTYRDPASVTKVMAQTHHLDGKQIDPKRAIPR----AEHERTAKVF 198
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV + K F QFG V + +M D T RS+GF F TF E++V +A +
Sbjct: 199 VGGLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRAMA-ASG 257
Query: 121 LELAGAQVEVKKAEPK 136
+EL G Q+E+KKA+P+
Sbjct: 258 VELEGKQIEIKKAQPR 273
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E ++ QFG++ IMRD S RSRGF F+T+ +V ++A+
Sbjct: 113 KMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPS-GRSRGFAFLTYRDPASVTKVMAQ 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G Q++ K+A P+
Sbjct: 172 THHLD--GKQIDPKRAIPR 188
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKG-AVGSK 52
M D++TG+ +GF F T+ D V + + + + + GKQ+EIK+ P+G A GSK
Sbjct: 227 MFDKETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQPRGTAQGSK 280
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 170 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 229
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 230 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 288
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 289 FHEINNKMVECKKAQPKEVMFP 310
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 24 DKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDV 83
D+ E I NG+ VE K + +D K ++ PS V D +D+F +FG++
Sbjct: 113 DESQEQILINNGQVVEAKAVL-------QD-KMERFLPALYPSDVPADSLRDYFSKFGEI 164
Query: 84 QEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+E +MRD +T RSRGFGF+TF +VD +L + + EL ++ K A P++
Sbjct: 165 RECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDPKVAFPRR 217
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+A+P VDKV++ H ++GK+++ K PK + +TKKI
Sbjct: 93 MKDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN-RTKKI 151
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 152 FVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 210
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 211 FHTIKNKKVECKKAQPKEAVQP 232
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVL-K 120
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 121 CPIHTLDGKKIDPKHATPK 139
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ +PS VDKV+ H ++GK+++ K PK KTKK+
Sbjct: 74 MRDPATKRARGFGFITFVEPSSVDKVLNARDHELDGKKIDPKVAFPKRTQAKLVTKTKKV 133
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ K +F +G V++ +M D +T R RGFGF+TFD+++ V D + + +
Sbjct: 134 FIGGLSATSTLEDMKQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDE-VADKVCEIH 192
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 193 FHEINGKMVECKKAQPKEVMLP 214
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +VD +L
Sbjct: 43 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDKVLNA 102
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL G +++ K A PK+
Sbjct: 103 RDH-ELDGKKIDPKVAFPKR 121
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 151 MRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 206
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EFK++F QFG V + +M D T R RGFGF+TF+ E VD +
Sbjct: 207 VGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI--NVP 264
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 265 LEIHGKPIEVKKAQPR 280
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 43 TIPKGAVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
T P G V K K+F+GG+ + +D+F QFG+V E +MRD ST RSRGFG
Sbjct: 104 TPPYGTVHKASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFG 163
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
F+TF + V+ ++ K + L+ G ++ K+A P+
Sbjct: 164 FLTFKDAKTVNIVMVKEHFLD--GKIIDPKRAIPR 196
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + + VD I I+GK +E+K+ P+G + ++ +++
Sbjct: 235 MMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASRR 292
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 31 MRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPR----EEQERTSKIF 86
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E++F +FF QFG V + +M D T R RGFGF+TFD + AVD L
Sbjct: 87 VGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLR--GP 144
Query: 121 LELAGAQVEVKKAEPK 136
L++ G Q+EVK+A+P+
Sbjct: 145 LQILGKQIEVKRAQPR 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ED K +F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKE 60
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 61 HYLD--GKIIDPKRAIPRE 77
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD 53
M D++TG+PRGFGFVT+ + VD + I GKQ+E+KR P+G + D
Sbjct: 115 MMDKETGRPRGFGFVTFDGDAAVDATLRGPLQILGKQIEVKRAQPRGNMRDDD 167
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 40 MRDPTTKRSRGFGFVTFADPGSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 99
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 100 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 158
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 159 FHEINNKMVECKKAQPKEVMFP 180
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 75 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 134
+ F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+ + EL ++ K A
Sbjct: 26 EHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDKVLAQPHH-ELDSKTIDPKVAF 84
Query: 135 PKK 137
P++
Sbjct: 85 PRR 87
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 21 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 80
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 81 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 139
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 140 FHEINNKMVECKKAQPKEVMFP 161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L + + EL ++
Sbjct: 3 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHH-ELDSKTIDP 61
Query: 131 KKAEPKK 137
K A P++
Sbjct: 62 KVAFPRR 68
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ D V+ V+ H ++GK ++ KR IP+ + KT KIF
Sbjct: 144 MRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPR----DEQEKTSKIF 199
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + EF+D+F QFG V + +M D T R RGFGF+TF++E V+ +
Sbjct: 200 VGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACI--NVP 257
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G VEVK+A+P+
Sbjct: 258 LEIHGKPVEVKRAQPR 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +++F QFG+V E +MRD +T RSRGFGF+TF + V+ ++ K
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 172
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 173 EHFLD--GKIIDPKRAIPR 189
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 89/137 (64%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPANVNHVLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQS 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+++PS VD V++ H ++GK+++ K PK + KTKKI
Sbjct: 73 MKDPVTQRSRGFGFITFSEPSSVDNVLKVPIHTLDGKKIDPKHATPKNRPKQPN-KTKKI 131
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 132 FVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 190
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 191 FHTIKNKKVECKKAQPKE 208
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG+V + IM+D T RSRGFGFITF +VD++L K
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVL-K 100
Query: 118 GNKLELAGAQVEVKKAEPK-KPNLPQPSYRRY 148
L G +++ K A PK +P P + + +
Sbjct: 101 VPIHTLDGKKIDPKHATPKNRPKQPNKTKKIF 132
>gi|307214018|gb|EFN89225.1| Heterogeneous nuclear ribonucleoprotein 27C [Harpegnathos saltator]
Length = 263
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 1 MKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFP- 59
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + +F +FG V E IM D +SRGFGF++F+ E+AVD +A
Sbjct: 60 -KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVA 118
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 119 E-HFVNLNGKQVEIKRAEPR 137
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 99/154 (64%), Gaps = 17/154 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK-------------- 46
M+D+ TG PRGFGFV++A P+ ++ + + H+++G+ +++K+ +P+
Sbjct: 77 MRDKNTGGPRGFGFVSFATPAAMEAAVSEAHMLDGRNLDVKKAVPREQAPAPVRAIWGGT 136
Query: 47 GAVGSKDFK-TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
GA + F+ KK+FVGG+ V E+ F+ +F +FG++ + +M D +T RSRGFGF+T+
Sbjct: 137 GAGPQRQFQDIKKVFVGGLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTY 196
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
E A+ +L++ + +E G ++VK+AEPK P+
Sbjct: 197 AEEAAMKKVLSQQHDME--GRPMDVKRAEPKVPD 228
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ KIFVGG+ E+ +F ++G++ + +MRD +T RGFGF++F T A++
Sbjct: 43 QPNKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAA 102
Query: 115 LAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+++ + L+ G ++VKKA P++ P P
Sbjct: 103 VSEAHMLD--GRNLDVKKAVPRE-QAPAP 128
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+++PS VD V++ H ++GK+++ K PK + KTKKI
Sbjct: 88 MKDPVTQRSRGFGFITFSEPSSVDNVLKVPIHTLDGKKIDPKHATPKNRPKQPN-KTKKI 146
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 147 FVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 205
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 206 FHTIKNKKVECKKAQPKE 223
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG+V + IM+D T RSRGFGFITF +VD++L K
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVL-K 115
Query: 118 GNKLELAGAQVEVKKAEPK-KPNLPQPSYRRY 148
L G +++ K A PK +P P + + +
Sbjct: 116 VPIHTLDGKKIDPKHATPKNRPKQPNKTKKIF 147
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 92/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +A
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVA 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTQQKPKRS 99
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+A+P VDKV++ H ++GK+++ K PK + +TKKI
Sbjct: 87 MKDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN-RTKKI 145
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 146 FVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 204
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 205 FHTIKNKKVECKKAQPKE 222
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVL-K 114
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 115 CPIHTLDGKKIDPKHATPK 133
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 1 MKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFP- 59
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + +F +FG V E IM D +SRGFGF++F+ E+AVD +A
Sbjct: 60 -KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVA 118
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 119 E-HFVNLNGKQVEIKRAEPR 137
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT++DP+ VDKV+ + H ++GK+++ K PK A +TKK+
Sbjct: 83 MKDPSTRRSRGFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFPKRAHPKMVTRTKKV 142
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K++F QFG +++ +M D T+R RGFGF+TF+ E VD + + +
Sbjct: 143 FVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDK-VCEIH 201
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ +P
Sbjct: 202 FHEINNKMVECKKAQPKEVMMP 223
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +++F +FGD+ E +M+D ST RSRGFGF+TF +VD +LA
Sbjct: 52 KMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPASVDKVLAN 111
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G EL G +++ K A PK+
Sbjct: 112 GPH-ELDGKKIDPKIAFPKR 130
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V V++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPANVQHVLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQS 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+AD S VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ +S ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGFITF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
+++ T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 LRNPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + +D+F +FG++ + ++R+ +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|296813155|ref|XP_002846915.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
gi|238842171|gb|EEQ31833.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
Length = 482
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 16/136 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGFGF+T+ DP V+ V+ ++ KR IP+ + +T KIF
Sbjct: 31 MRDGASGRSRGFGFLTFTDPKTVNTVM----------IDPKRAIPR----DEQERTSKIF 76
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E EFK FFMQFG V + +M D T R RGFGF+TFD+E AV+ L+
Sbjct: 77 VGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV--P 134
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 135 LEIHGKAIEVKKAQPR 150
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+F+GG+ + K++F QFG+V E +MRD ++ RSRGFGF+TF + V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVM 57
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D+ TG+PRGFGFVT+ + V+ + I+GK +E+K+ P+G + D +++++
Sbjct: 105 MIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQPRGNL-RDDEESRRLG 163
Query: 61 VGGIPSSVNEDEFKD 75
G +D FKD
Sbjct: 164 KRGF----RDDRFKD 174
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 92/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +A
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVA 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTQQKPKRS 99
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 92/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +A
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVA 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTQQKPKRS 99
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ DP V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 242 MKDPVTQRSRGFGFITFQDPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 300
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 301 FVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 359
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 360 FHTIKNKKVECKKAQPKESVTP 381
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVL-K 269
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 270 VPIHTLDGKKIDPKHATPK 288
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ DPS VDKV+ H ++GK+++ K PK KTKK+
Sbjct: 73 MRDPATKRARGFGFITFVDPSSVDKVLNAREHELDGKKIDPKVAFPKRTQAKLVTKTKKV 132
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ ++ K +F +G V++ +M D +T R RGFGF+TFD+++ V D + + +
Sbjct: 133 FIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDE-VADKVCEIH 191
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ G VE KKA+PK+ LP
Sbjct: 192 FHEINGKMVECKKAQPKEVMLP 213
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F +FG+V E +MRD +T R+RGFGFITF +VD +L
Sbjct: 42 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVL-N 100
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL G +++ K A PK+
Sbjct: 101 AREHELDGKKIDPKVAFPKR 120
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 11 GFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPK 46
GFGFVT+ V DKV E H INGK VE K+ PK
Sbjct: 257 GFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 293
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P+ VDKV++ H ++GK+++ K PK ++ KTKKI
Sbjct: 199 MKDPITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKTKKI 258
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 259 FVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDR-VCEIH 317
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 318 FHTIKNKKVECKKAQPKEAVTP 339
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ ++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVL-K 226
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 227 VPIHTLDGKKIDPKHATPK 245
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP V+ V++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPGNVNHVLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ + +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNE-R 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQS 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|148905888|gb|ABR16106.1| unknown [Picea sitchensis]
Length = 409
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 26/224 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+DR TG+ RGFG+ T++ K ++ H +NG+ +E+K PK + + K +IF
Sbjct: 38 MRDRATGRSRGFGYATFSSVEDAKKALDSEHFLNGRALEVKVATPKEEMKAPSKKITRIF 97
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IP SV ED F+ +F +FG++++ + ++ + RG GFITF++ +VD L+++ +
Sbjct: 98 VARIPPSVTEDAFRKYFEEFGNIEDLYMPKEKGSKGHRGIGFITFESSGSVDRLMSETHM 157
Query: 121 LELAGAQVEVKKAEPKKPNLPQP---------SYRRYNNPKPAYG------------SGF 159
L GA + V +A PK+ + Q +Y Y N YG SGF
Sbjct: 158 --LGGATIAVDRATPKEESTKQWAKPVSGGYGAYNAYINAATRYGALGSATLYDHPSSGF 215
Query: 160 GDAYGGYGGGGF-AGGGFGGSGGGGGGGGYRSSGAYGVRGGGYG 202
D Y GGG+ +G + G GG GG SS RG GYG
Sbjct: 216 RDGYASEVGGGYGSGNSWPPHGAGGMIGG--SSYGMADRGAGYG 257
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+ V GIP V+ + +D+ +FG++ + +MRD +T RSRGFG+ TF + + D
Sbjct: 4 RERKLVVLGIPWDVDTEGLQDYMGKFGELDDVIVMRDRATGRSRGFGYATFSSVE--DAK 61
Query: 115 LAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
A ++ L G +EVK A PK+ + PS
Sbjct: 62 KALDSEHFLNGRALEVKVATPKE-EMKAPS 90
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KKIFVG + + + +F FG V + + +D S RGFGF+TF E V D ++
Sbjct: 271 KKIFVGRLSQEATAGDLRRYFSNFGTVVDVYVPKDARRSGHRGFGFVTF-AEDGVADRVS 329
Query: 117 KGNKLELAGAQVEVKKAEPKKPNL 140
+ + E+ G QV + A P ++
Sbjct: 330 RRSH-EILGQQVAIDSATPPDDDI 352
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIP 45
KD + RGFGFVT+A+ V D+V +H I G+QV I P
Sbjct: 304 KDARRSGHRGFGFVTFAEDGVADRVSRRSHEILGQQVAIDSATP 347
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 92/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +A
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVA 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTQQKPKRS 99
>gi|428175617|gb|EKX44506.1| hypothetical protein GUITHDRAFT_72201, partial [Guillardia theta
CCMP2712]
Length = 164
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV----GSKDFKT 56
MKD+ TG RGFGFVT+ DP V +KV+ H I G+ VE K IP+G +
Sbjct: 32 MKDKLTGNGRGFGFVTFEDPEVAEKVVAARHTIRGRSVEAKLAIPRGEAPGPRSDPSDRV 91
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KIFVGG+ S+V+E +FK++F ++G + + QIM DH+T RSRGFGFITF++ ++V+D++
Sbjct: 92 TKIFVGGLASTVSEADFKNYFSRWGKIMDAQIMVDHNTKRSRGFGFITFESYKSVEDVIR 151
Query: 117 KGN 119
N
Sbjct: 152 IRN 154
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+P+ + + K++F++FG + + +M+D T RGFGF+TF+ + + ++A
Sbjct: 1 KIFIGGLPTETTDFDLKNYFVRFGVLADVVVMKDKLTGNGRGFGFVTFEDPEVAEKVVAA 60
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G VE K A P+
Sbjct: 61 RHTIR--GRSVEAKLAIPR 77
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P VDKV++ H ++GK+++ K PK + KTKKI
Sbjct: 231 MKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 289
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 290 FVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 348
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 349 FHTIKNKKVECKKAQPKE 366
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ K++F FG V + IM+D T RSRGFGFITF VD +L K
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVL-K 258
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 259 VPIHTLDGKKIDPKHATPK 277
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +PS V+ V++ H ++GK+++ K PKG G + KTKKI
Sbjct: 91 MKDPVTQRSRGFGFITFEEPSSVENVLKVPVHTLDGKKIDPKHATPKGR-GKTNGKTKKI 149
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E+ VD + + +
Sbjct: 150 FVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDR-VCEIH 208
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA PK+
Sbjct: 209 FHNIKNKKVECKKAMPKE 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ + +F FG++ + IM+D T RSRGFGFITF+ +V+++L K
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVL-K 118
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 119 VPVHTLDGKKIDPKHATPK 137
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+AD + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P VDKV++ H ++GK+++ K PK + KTKKI
Sbjct: 258 MKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 316
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 317 FVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 375
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 376 FHTIKNKKVECKKAQPKE 393
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ K++F FG V + IM+D T RSRGFGFITF VD +L K
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVL-K 285
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 286 VPIHTLDGKKIDPKHATPK 304
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 11/141 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGK-----QVEIKRTIPKGAVGSKDFK 55
M+D TG+ RGFGF+T+ D V+ V+ H ++GK Q++ KR IP+ + K
Sbjct: 153 MRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKILILLQIDPKRAIPR----DEQEK 208
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
T KIFVGG+ + EFK++F QFG V + +M D T R RGFGF+TF+ E VD +
Sbjct: 209 TSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACI 268
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
LE+ G +EVKKA+P+
Sbjct: 269 --NVPLEIHGKPIEVKKAQPR 287
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 181
Query: 118 GNKLE---LAGAQVEVKKAEPK 136
+ L+ L Q++ K+A P+
Sbjct: 182 EHFLDGKILILLQIDPKRAIPR 203
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + + VD I I+GK +E+K+ P+G + ++ +++
Sbjct: 242 MMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASRR 299
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 PHH-ELDSKTIDPKVAFPRR 100
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D ++G+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 32 MRDGQSGRSRGFGFLTFKDPKTVNTVMVKEHSLDGKLIDPKRAIPR----DEQERTAKIF 87
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +FK+FFMQFG V + +M D T R RGFGF+TFD E+AV+ L
Sbjct: 88 VGGVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAVERTLE--GP 145
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 146 LAILGKGIEVKRAQPR 161
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + KD+F QFG+V E +MRD + RSRGFGF+TF + V+ ++ K
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVK 60
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 61 EHSLD--GKLIDPKRAIPR 77
>gi|301121326|ref|XP_002908390.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
gi|262103421|gb|EEY61473.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
Length = 632
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 39/200 (19%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD + + RGFGF+TYADP VD+ + + HI++ ++VE KR +P+ A +D
Sbjct: 40 MKDPISRRSRGFGFITYADPLCVDRALAQPNHILDSRRVEAKRAVPR-AESMRDIGNSAS 98
Query: 55 --------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHST 94
TKKIFVGG+ + +FK +FMQ+G V ++M + T
Sbjct: 99 SSRVNGSTSISSISANSAVGATKKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRET 158
Query: 95 SRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPA 154
++SRGFGF+ F++E +V+ +L N + + G VEVK+A P R + P P
Sbjct: 159 NKSRGFGFVIFESEASVELVLQDKNHV-IDGKSVEVKRAVP-----------RTDVPPPR 206
Query: 155 YGSGFGDAYGGYGGGGFAGG 174
S G+++ G G G G
Sbjct: 207 SVSSRGNSFSGPSGPGSVGS 226
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +++ + +F +G V + +M+D + RSRGFGFIT+ VD LA+
Sbjct: 9 KIFIGGLSYETTDEKLRSYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPLCVDRALAQ 68
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
N + L +VE K+A P+ ++
Sbjct: 69 PNHI-LDSRRVEAKRAVPRAESM 90
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 36 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD----KTGKIF 91
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV D + +
Sbjct: 92 VGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKF 150
Query: 121 LELAGAQVEVKKAEPK 136
++ ++E+K+AEP+
Sbjct: 151 IDFKDRKIEIKRAEPR 166
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED +++F ++G V + +IM+D +T RSRGFGF++F+ +VD+++
Sbjct: 5 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 65 QHILD--GKVIDPKRAIPR 81
>gi|15217975|ref|NP_176143.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|12321044|gb|AAG50640.1|AC082643_4 RNA binding protein [Arabidopsis thaliana]
gi|15450912|gb|AAK96727.1| RNA binding protein [Arabidopsis thaliana]
gi|17978725|gb|AAL47356.1| RNA binding protein [Arabidopsis thaliana]
gi|18181938|dbj|BAB83876.1| RNA binding protein [Arabidopsis thaliana]
gi|332195431|gb|AEE33552.1| RNA-binding protein 1 [Arabidopsis thaliana]
Length = 360
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 27/162 (16%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------- 54
K++ TG+PRGFGFV +A+ V K + DTH I GK V++++ I K + + F
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLER 98
Query: 55 -------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
+TKKIFVGG+ S+ E+EFK +F +FG + +M D T+
Sbjct: 99 KVQQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTN 158
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
R RGFGF+T+D+E +V +++ + N EL+ +VEVK+A PK+
Sbjct: 159 RPRGFGFVTYDSEDSV-EVVMQSNFHELSDKRVEVKRAIPKE 199
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D+ K+FVGGI +E+ K +F ++G V E + ++ T + RGFGF+ F + D
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFAND--CD 59
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ A + + G V+V+KA K QP
Sbjct: 60 VVKALRDTHFILGKPVDVRKAIRKHELYQQP 90
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD 53
M D T +PRGFGFVTY V+ V++ H ++ K+VE+KR IPK + S +
Sbjct: 152 MHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNN 205
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DPS V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPSNVGLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVG 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G +L G ++ K P+ P+
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTLQKPK 97
>gi|6566348|dbj|BAA88269.1| RNA binding protein [Arabidopsis thaliana]
Length = 381
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 101/179 (56%), Gaps = 37/179 (20%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------- 54
K++ TG+PRGFGFV +A+ V K + DTH I GK V++++ I K + + F
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLER 98
Query: 55 -------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
+TKKIFVGG+ S+ E+EFK +F +FG + +M D T+
Sbjct: 99 KVQQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTN 158
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK---------PNLPQPSY 145
R RGFGF+T+D+E +V +++ + N EL+ +VEVK+A PK+ N+P PSY
Sbjct: 159 RPRGFGFVTYDSEDSV-EVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIP-PSY 215
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D+ K+FVGGI +E+ K +F ++G V E + ++ T + RGFGF+ F + D
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFAND--CD 59
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ A + + G V+V+KA K QP
Sbjct: 60 VVKALRDTHFILGKPVDVRKAIRKHELYQQP 90
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD 53
M D T +PRGFGFVTY V+ V++ H ++ K+VE+KR IPK + S +
Sbjct: 152 MHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNN 205
>gi|348562530|ref|XP_003467063.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cavia
porcellus]
Length = 285
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Query: 10 RGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSV 68
RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ ++
Sbjct: 19 RGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 78
Query: 69 NEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 128
++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + + E+ V
Sbjct: 79 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMV 137
Query: 129 EVKKAEPKKPNLP 141
E KKA+PK+ P
Sbjct: 138 ECKKAQPKEVMFP 150
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAV 49
M D+ T + RGFGFVT+ + VV+KV E H IN K VE K+ PK +
Sbjct: 99 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVM 148
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 179 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 237
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 238 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 296
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 297 FHTIKNKKVECKKAQPKEAVTP 318
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 206
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 207 VPIHTLDGKKIDPKHATPK 225
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +L +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 78 PHH-ELDSKTIDPKVAFPRR 96
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P VDKV++ H ++GK+++ K PK + KTKKI
Sbjct: 253 MKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 311
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 312 FVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 370
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 371 FHTIKNKKVECKKAQPKEAVTP 392
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ K++F FG V + IM+D T RSRGFGFITF VD +L K
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVL-K 280
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 281 VPIHTLDGKKIDPKHATPK 299
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 16/146 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEI----------KRTIPKGAVG 50
M+D +G+ RGFGF+T+ DP V+ V+ H ++GK V + KR IP+
Sbjct: 144 MRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDGKIVSLLPCHNPCIDPKRAIPR---- 199
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
+ KT KIFVGG+ + EF+++F QFG V + +M D T R RGFGF+TF++E
Sbjct: 200 DEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAG 259
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPK 136
VD + LE+ G +EVKKA+P+
Sbjct: 260 VDACI--NVPLEIHGKPIEVKKAQPR 283
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 37 QVEIKRTIPKGAVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
Q ++ T P G V K K+F+GG+ + +D+F QFG+V E +MRD S+
Sbjct: 91 QDDMPATPPYGTVHKASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSG 150
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLE 122
RSRGFGF+TF + V+ ++ K + L+
Sbjct: 151 RSRGFGFLTFKDPKTVNIVMVKEHFLD 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + VD I I+GK +E+K+ P+G + ++ K+
Sbjct: 238 MMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEAAKR 295
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 78 PHH-ELDSKTIDPKVAFPRR 96
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V + +M D +T+R RGFGFITF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 QHH-ELDSKTIDPKVAFPRR 100
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGFGF+T+ DP V+ V+ H ++GK ++ KR IP+ + +T KIF
Sbjct: 134 MRDGATGRSRGFGFLTFRDPKTVNTVMVKEHSLDGKLIDPKRAIPR----DEQERTAKIF 189
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ E +F+ FF +FG V + +M D T R RGFGF+TFD E AV+ L
Sbjct: 190 VGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVERTLE--GP 247
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK+A+P+
Sbjct: 248 LAILGKPIEVKRAQPR 263
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 35 GKQVEIKRTIP--KGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDH 92
G+Q E + P + +GSK+ K+F+GG+ + KD+F QFG+V E +MRD
Sbjct: 80 GQQNEFREPEPDNRPLIGSKE--DGKMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDG 137
Query: 93 STSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+T RSRGFGF+TF + V+ ++ K + L+ G ++ K+A P+
Sbjct: 138 ATGRSRGFGFLTFRDPKTVNTVMVKEHSLD--GKLIDPKRAIPR 179
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 219 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 277
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 278 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 336
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 337 FHTIKNKKVECKKAQPKE 354
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 246
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 247 VPIHTLDGKKIDPKHATPK 265
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYAGLAPGY 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F Q+G+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 235 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 293
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 294 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 352
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 353 FHTIKNKKVECKKAQPKE 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 262
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 263 VPIHTLDGKKIDPKHATPK 281
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYAGLAPGY 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F Q+G+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 92/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPANVPLVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E AVD +A
Sbjct: 104 -KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVA 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTQQKPKRS 99
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 235 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 293
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 294 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 352
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 353 FHTIKNKKVECKKAQPKE 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 262
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 263 VPIHTLDGKKIDPKHATPK 281
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+A+P VDKV++ H ++GK+++ K PK + +TKKI
Sbjct: 93 MKDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN-RTKKI 151
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 152 FVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 210
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 211 FHTIKNKKVECKKAQPKEAVQP 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVL-K 120
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 121 CPIHTLDGKKIDPKHATPK 139
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P VDKV++ H ++GK+++ K PK + KTKKI
Sbjct: 218 MKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 276
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 277 FVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 335
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 336 FHTIKNKKVECKKAQPKEAVTP 357
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ K++F FG V + IM+D T RSRGFGFITF VD +L K
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVL-K 245
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 246 VPIHTLDGKKIDPKHATPK 264
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 206 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 264
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 265 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 323
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 324 FHTIKNKKVECKKAQPKE 341
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 233
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 234 VPIHTLDGKKIDPKHATPK 252
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P VDKV++ H ++GK+++ K PK + KTKKI
Sbjct: 231 MKDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 289
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 290 FVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 348
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 349 FHTIKNKKVECKKAQPKE 366
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF VD +L K
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVL-K 258
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 259 VPIHTLDGKKIDPKHATPK 277
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 207 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 265
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 266 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 324
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 325 FHTIKNKKVECKKAQPKEAVTP 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 234
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 235 VPIHTLDGKKIDPKHATPK 253
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 238 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 296
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 297 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 355
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 356 FHTIKNKKVECKKAQPKE 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 265
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 266 VPIHTLDGKKIDPKHATPK 284
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 49 MRDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 108
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 109 FVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 167
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 168 FHEINNKMVECKKAQPKEVMFP 189
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 78 PHH-ELDSKTIDPKVAFPRR 96
>gi|197209735|dbj|BAG68909.1| RNA binding protein [Arabidopsis thaliana]
Length = 359
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 27/162 (16%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------- 54
K++ TG+PRGFGFV +A+ V K + DTH I GK V++++ I K + + F
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHEIYQQPFSMQFLER 98
Query: 55 -------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
++KKIFVGG+ S+ E+EFK +F +FG + +M D T+
Sbjct: 99 KMQQMNGGLREMSSNGVTSRSKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTN 158
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
R RGFGF+T+D+E +V +++ + N EL+ +VEVK+A PK+
Sbjct: 159 RPRGFGFVTYDSEDSV-EVVMQSNFHELSDKRVEVKRAIPKE 199
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D+ K+FVGGI +E+ K +F ++G V E + ++ T + RGFGF+ F + D
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFAND--CD 59
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ A + + G V+V+KA K QP
Sbjct: 60 VVKALRDTHFILGKPVDVRKAIRKHEIYQQP 90
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD 53
M D T +PRGFGFVTY V+ V++ H ++ K+VE+KR IPK + S +
Sbjct: 152 MHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNN 205
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 235 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 293
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 294 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 352
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 353 FHTIKNKKVECKKAQPKE 370
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 262
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 263 VPIHTLDGKKIDPKHATPK 281
>gi|343455562|gb|AEM36348.1| At1g58470 [Arabidopsis thaliana]
Length = 360
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 27/162 (16%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------- 54
K++ TG+PRGFGFV +A+ V K + DTH I GK V++++ I K + + F
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHEIYHQPFSMQFLER 98
Query: 55 -------------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
++KKIFVGG+ S+ E+EFK +F +FG + +M D T+
Sbjct: 99 KMQQMNGGLREMSSNGVASRSKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTN 158
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
R RGFGF+T+D+E +V +++ + N EL+ +VEVK+A PK+
Sbjct: 159 RPRGFGFVTYDSEDSV-EVVMQSNFHELSDKRVEVKRAIPKE 199
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D+ K+FVGGI +E+ K +F ++G V E + ++ T + RGFGF+ F + D
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFAND--CD 59
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ A + + G V+V+KA K QP
Sbjct: 60 VVKALRDTHFILGKPVDVRKAIRKHEIYHQP 90
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD 53
M D T +PRGFGFVTY V+ V++ H ++ K+VE+KR IPK + S +
Sbjct: 152 MHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNN 205
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DP+ V V+++ H ++G+ ++ K P+ K F
Sbjct: 32 MKNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFP- 90
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + +F +FG V E IM D +SRGFGF++F+ E+AVD +A
Sbjct: 91 -KVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVA 149
Query: 117 KGNKLELAGAQVEVKKAE 134
+ + + L G QVE+K+AE
Sbjct: 150 E-HFVNLNGKQVEIKRAE 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 61 GPH-QLDGRTIDPKPCNPRTLQKPKRS 86
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 207 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 265
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 266 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 324
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 325 FHTIKNKKVECKKAQPKEAVTP 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 234
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 235 VPIHTLDGKKIDPKHATPK 253
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 168 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 226
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 227 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 285
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 286 FHTIKNKKVECKKAQPKEAVTP 307
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 195
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 196 VPIHTLDGKKIDPKHATPK 214
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT++DPS V V+++ H ++G+ ++ K P+ K F
Sbjct: 45 MKNSESGRSRGFGFVTFSDPSNVGLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF +FG V E IM D +SRGFGF++F+ E AVD +
Sbjct: 104 -KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVG 162
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 163 E-HFVNLNGKQVEIKRAEPR 181
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F ++G+V + +M++ + RSRGFGF+TF V +L
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
G +L G ++ K P+ P+ S
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTLQKPKRS 99
>gi|334322422|ref|XP_001367956.2| PREDICTED: RNA-binding protein Musashi homolog 2-like [Monodelphis
domestica]
Length = 302
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Query: 10 RGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSV 68
RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ ++
Sbjct: 18 RGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 77
Query: 69 NEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 128
++ K +F QFG V++ +M D +T+R RGFGF+TF+ E V+ + + + E+ V
Sbjct: 78 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIHFHEINNKMV 136
Query: 129 EVKKAEPKKPNLP 141
E KKA+PK+ P
Sbjct: 137 ECKKAQPKEVMFP 149
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAV 49
M D+ T + RGFGFVT+ + VV+KV E H IN K VE K+ PK +
Sbjct: 98 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVM 147
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 15/152 (9%)
Query: 5 KTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---------F 54
+TG+ RGFGFVT+ DPS V V+ H ++G+ V+ K P+GA
Sbjct: 44 ETGRSRGFGFVTFRDPSCVATVLAGGPHQLDGRTVDPKSCNPRGASRPGGGGGGPGARGV 103
Query: 55 KTK----KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
+TK KIFVGG+P++V E + FF ++G V E IM D RSRGFGFI+F++E+
Sbjct: 104 RTKGSSTKIFVGGLPATVTETDLHAFFSEYGKVTETLIMYDQEQRRSRGFGFISFESEEP 163
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
V+ L A+ ++++G QVE K+AEPK+ P+
Sbjct: 164 VNQLTAQ-RYVDISGKQVECKRAEPKESRPPK 194
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ ++ ++F +FG+V + +M + T RSRGFGF+TF V +LA
Sbjct: 10 KIFVGGLSWETTQESLLNYFSRFGEVVDCVVMCNE-TGRSRGFGFVTFRDPSCVATVLA- 67
Query: 118 GNKLELAGAQVEVKKAEP 135
G +L G V+ K P
Sbjct: 68 GGPHQLDGRTVDPKSCNP 85
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPK 46
M D++ + RGFGF+++ V+++ ++ I+GKQVE KR PK
Sbjct: 142 MYDQEQRRSRGFGFISFESEEPVNQLTAQRYVDISGKQVECKRAEPK 188
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+A+P VDKV++ H ++GK+++ K PK + +TKKI
Sbjct: 72 MKDPMTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN-RTKKI 130
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 131 FVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 189
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ +VE KKA+PK+ P
Sbjct: 190 FHTIKNKKVECKKAQPKEAVQP 211
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVL-K 99
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 100 CPIHTLDGKKIDPKHATPK 118
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+A+P VDKV++ H ++GK+++ K PK + +TKKI
Sbjct: 72 MKDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQAN-RTKKI 130
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 131 FVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 189
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 190 FHTIKNKKVECKKAQPKE 207
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +L K
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVL-K 99
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 100 CPIHTLDGKKIDPKHATPK 118
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 7/135 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M D G+ RGFGF+T+ + S VD+V++ HI++GK ++ KR IP+ KT KIF
Sbjct: 182 MTDGHNGKSRGFGFLTFENSSSVDEVVKTQHILDGKVIDPKRAIPREEQD----KTGKIF 237
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGGI V EF++FF Q+G + + Q+M D T RSRGFGF+T+D+ AVD + NK
Sbjct: 238 VGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDKVCQ--NK 295
Query: 121 -LELAGAQVEVKKAE 134
+E G +E+K+AE
Sbjct: 296 FIEFKGKTIEIKRAE 310
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 45 PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
PK A SKD + K+F+GG+ ED + +F ++G+V + +IM D +SRGFGF+T
Sbjct: 140 PKKADLSKD--SCKMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLT 197
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F+ +VD+++ + L+ G ++ K+A P++
Sbjct: 198 FENSSSVDEVVKTQHILD--GKVIDPKRAIPRE 228
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYAGLAPGY 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F Q+G+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTSSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYAGLAPGY 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F Q+G+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ +P V+KV++ H ++GK+++ K PK + KTKKI
Sbjct: 236 MKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQAN-KTKKI 294
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + +E K +F QFG V+E ++ D T R RGFGF+TF+ E VD + + +
Sbjct: 295 FVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR-VCEIH 353
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE KKA+PK+
Sbjct: 354 FHTIKNKKVECKKAQPKE 371
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + D+ K++F FG V + IM+D T RSRGFGFITF V+ +L K
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL-K 263
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G +++ K A PK
Sbjct: 264 VPIHTLDGKKIDPKHATPK 282
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V + +M D +T+R RGFGFITF+ E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ EL ++ K A P++
Sbjct: 82 QHH-ELDSKTIDPKVAFPRR 100
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 15/145 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGK---------QVEIKRTIPKGAVGS 51
M+D TG+ RGFGF+T+ D V+ V+ H ++GK Q++ KR IP+
Sbjct: 147 MRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIVSYRLIPQQIDPKRAIPR----D 202
Query: 52 KDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 111
+ KT KIFVGG+ + EFK++F QFG V + +M D T R RGFGF+TF++E V
Sbjct: 203 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 262
Query: 112 DDLLAKGNKLELAGAQVEVKKAEPK 136
D + LE+ G +EVKKA+P+
Sbjct: 263 DACI--NVPLEIHGKPIEVKKAQPR 285
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + +D+F QFG+V E +MRD ST RSRGFGF+TF + V+ ++ K
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 118 GNKLE-------LAGAQVEVKKAEPK 136
+ L+ L Q++ K+A P+
Sbjct: 176 EHFLDGKIVSYRLIPQQIDPKRAIPR 201
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKK 58
M D+ TG+PRGFGFVT+ + VD I I+GK +E+K+ P+G + ++ +++
Sbjct: 240 MMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQPRGNLREEEEASRR 297
>gi|2582639|emb|CAA05398.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 452
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 29 DTHIINGKQVEIKRTIPKG--AVGSKDF-----------------KTKKIFVGGIPSSVN 69
D HII+G+ VE K+ +P+ V + +TKKIFVGG+PSS+
Sbjct: 2 DKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSIT 61
Query: 70 EDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE 129
E EFK++F QFG + + +M DH+T R RGFGFITFD+E++VD +L K EL G VE
Sbjct: 62 EAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFH-ELNGKMVE 120
Query: 130 VKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYR 189
VK+A PK+ + P N P G+G+ YG A F G
Sbjct: 121 VKRAVPKELSSTTP------NRSPLI--GYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG 172
Query: 190 SSGAYGVRGGGYGGY-----GVGGEFGGYGGYGGGMGAYRGEP 227
S+G + G G + G+ E + G Y P
Sbjct: 173 SAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIP 215
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
M D T +PRGFGF+T+ VD V+ T H +NGK VE+KR +PK
Sbjct: 81 MYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPK 127
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 1 MKDR-KTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGA---VGSKDFK 55
M D+ K GQ +GFGFVT+ADP+ VD V E H + GK ++ KR +G+ +G D +
Sbjct: 38 MMDKDKPGQNKGFGFVTFADPACVDDVTNEKNHNLEGKGLDCKRCKARGSEKRMGPGDQR 97
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
TKK+FVGGI +++ + F G+V++ IM D T + RGFGF+T D+E+AV+ L+
Sbjct: 98 TKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLV 157
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
+ + LEL G +E+KKA+PK
Sbjct: 158 -RMHHLELKGKSMEIKKAQPK 177
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS-RSRGFGFITFDTEQAVDDLLA 116
KIFVGG+ + + D F+ +F +FG + + +M D +++GFGF+TF VDD+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ N L G ++ K+ + +
Sbjct: 67 EKNH-NLEGKGLDCKRCKAR 85
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKK- 58
MKD+ T Q RGFGFV + DP+ V V++ H ++G+ ++ K P+G K +TK
Sbjct: 55 MKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKT-RTKDG 113
Query: 59 -------------IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
IFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF
Sbjct: 114 WKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITF 173
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ EQ+VD + + ++ G +VEVKKAEP+ P P
Sbjct: 174 EAEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAPAP 210
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+FVGG+ S ++ +++F Q+G+V + IM+D ST++SRGFGF+ F V +L
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 83
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K P+
Sbjct: 84 KPHNLD--GRNIDPKPCTPR 101
>gi|402887861|ref|XP_003907299.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Papio anubis]
Length = 637
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 327 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 386
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 387 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 445
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 446 FHEINNKMVECKKAQPKE 463
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 88 IMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K A P++
Sbjct: 326 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKVAFPRR 374
>gi|414869241|tpg|DAA47798.1| TPA: hypothetical protein ZEAMMB73_787929 [Zea mays]
Length = 235
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 98/178 (55%), Gaps = 28/178 (15%)
Query: 50 GSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
SKDFKTKKI VG +PS++ ED+ K FF ++G + +HQIM DH T RSRGFGFI F ++
Sbjct: 4 SSKDFKTKKIIVGELPSTLTEDDVKSFFARYGTMVDHQIMFDHETKRSRGFGFIVFASD- 62
Query: 110 AVDDLLAKGNKLELAGAQVEVKKAEPKK-PNLPQPSYRRYNNPKPAYGSGFGD--AYGGY 166
++VE+KKAEPKK N P P N + AY SG D + Y
Sbjct: 63 ----------------SKVEIKKAEPKKSSNAPPPPPLYGRNARLAYDSGSRDHPSANNY 106
Query: 167 GGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGG-YGGYGGGMGAY 223
GG A + GGG G YRS +G R G YGG G+FG YG Y G+G Y
Sbjct: 107 GGMPNAYANY----RGGGFGPYRSDTGFGGRLGNYGG---TGDFGSTYGRYYAGLGGY 157
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +TG+ RGF F+T+ DP+ V+ V+ H ++GK ++ KR IP+ + +T+K+F
Sbjct: 31 MRD-QTGRSRGFAFLTFEDPAAVNAVMVREHYLDGKIIDPKRAIPR----QEHHRTQKLF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +V + + +F QFG V + +M D +SRS+GFGF+TF+ ++ LL G+
Sbjct: 86 VGGLAPTVTTESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIERLLGLGH- 144
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G ++VK A+P+
Sbjct: 145 LEIDGKMIDVKLAQPR 160
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ +++ +++F QFG V IMRD T RSRGF F+TF+ AV+ ++ +
Sbjct: 1 MFVGGLNWDTSDEGLRNYFSQFGKVDACTIMRDQ-TGRSRGFAFLTFEDPAAVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 60 HYLD--GKIIDPKRAIPRQ 76
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKK- 58
MKD+ T Q RGFGFV + DP+ V V++ H ++G+ ++ K P+G K +TK
Sbjct: 43 MKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKT-RTKDG 101
Query: 59 -------------IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
IFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF
Sbjct: 102 WKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ EQ+VD + + ++ G +VEVKKAEP+ P P
Sbjct: 162 EAEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAPAP 198
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+FVGG+ S ++ +++F Q+G+V + IM+D ST++SRGFGF+ F V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K P+
Sbjct: 72 KPHNLD--GRNIDPKPCTPR 89
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 46 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 105
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + D+ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 106 FVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 164
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 165 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 224
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 225 SYTGLAPGY 233
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 30 LREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 88
Query: 133 AEPKK 137
A P++
Sbjct: 89 AFPRR 93
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKK- 58
MKD+ T Q RGFGFV + DP+ V V++ H ++G+ ++ K P+G K +TK
Sbjct: 43 MKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPRGMQPEKT-RTKDG 101
Query: 59 -------------IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
IFVGGIP + E E +D+F +FG V E ++ D R RGFGFITF
Sbjct: 102 WKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
+ EQ+VD + + ++ G +VEVKKAEP+ P P
Sbjct: 162 EAEQSVDQAV-NMHFHDIMGKKVEVKKAEPRDSKAPAP 198
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+FVGG+ S ++ +++F Q+G+V + IM+D ST++SRGFGF+ F V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + L+ G ++ K P+
Sbjct: 72 KPHNLD--GRNIDPKPCTPR 89
>gi|159464421|ref|XP_001690440.1| hypothetical protein CHLREDRAFT_99772 [Chlamydomonas reinhardtii]
gi|158279940|gb|EDP05699.1| predicted protein [Chlamydomonas reinhardtii]
Length = 174
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------GAVGSKDFKT 56
+R G+PRGFGFV + P V DKV+ H+I+ ++VE KR +PK GS +T
Sbjct: 41 NRNNGRPRGFGFVVFESPEVADKVVATKHMIDRREVEAKRAVPKEDAPEEKQQGSAPQRT 100
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KKIFVGG+ +V+E + + F FG V++ +M DH R RGFGF+TF E+AV+ + +
Sbjct: 101 KKIFVGGLAPTVDEAQLRQHFSDFGTVEDAVVMYDHENKRPRGFGFVTFAEEEAVERVFS 160
Query: 117 KGNKLELAGAQVEV 130
G +A +EV
Sbjct: 161 HGAVQTIADKPIEV 174
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D ++ K+FVGG+ ++ + + FG V+E + + + R RGFGF+ F++ + D
Sbjct: 3 DKQSAKVFVGGLSWETTGEKLRAYMENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVAD 62
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++A + ++ +VE K+A PK+
Sbjct: 63 KVVATKHMID--RREVEAKRAVPKE 85
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 15/220 (6%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIP--KGAVGSKDFKTKKI 59
D T + RGF FVT+A+P+ VDKV+E H ++ + V+ KR +P K +TKKI
Sbjct: 107 DPITHRSRGFAFVTFANPADVDKVLESGPHQLDNRTVDPKRALPLHKQIQLKGQHRTKKI 166
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ + E K+FF +FG++ + + + D T + RGF F++FDTE+AVD K
Sbjct: 167 FIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQF 226
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGF-------A 172
+ ++G QVE+K+A PK S + P Y + + Y GY + A
Sbjct: 227 HV-VSGRQVEIKRATPKDQASRGKSAQYSGYPNAQYQQAYPNYYQGYPYAAYPSYTTTAA 285
Query: 173 GGGFGGSGGGGGGGG---YRSSGAYG-VRGGGYGGYGVGG 208
G+ + G G Y SS YG VR GY G G
Sbjct: 286 YVGYQAAYPGNYGSADFQYDSSSRYGPVRAAGYTGSQASG 325
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E+ + +F +FG + I D T RSRGF F+TF VD +L
Sbjct: 74 KMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLES 133
Query: 118 GNKLELAGAQVEVKKAEP 135
G +L V+ K+A P
Sbjct: 134 GPH-QLDNRTVDPKRALP 150
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H + K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V + +M D +T+R RGFGFITF++E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
K + ++ K A P++
Sbjct: 82 -QKHSVLIKTIDPKVAFPRR 100
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H + K ++ K P+ A +TKKI
Sbjct: 53 MRDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ ++ ++ K +F QFG V + +M D +T+R RGFGFITF++E V+ + + +
Sbjct: 113 FVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ P
Sbjct: 172 FHEINNKMVECKKAQPKEVMFP 193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + D +D+F +FG+++E +MRD +T RSRGFGF+TF +VD +LA+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
K + ++ K A P++
Sbjct: 82 -QKHSVLIKTIDPKVAFPRR 100
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 182 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 241
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 242 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 300
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 301 FHEINNKMVECKKAQPKE 318
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 224
Query: 133 AEPKK 137
A P++
Sbjct: 225 AFPRR 229
>gi|125575106|gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japonica Group]
Length = 463
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 36/173 (20%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------- 53
M+D+ TG+PRGFGFV ++DPS VD + D H ++G+ V++KR + + +
Sbjct: 38 MRDKLTGRPRGFGFVVFSDPSSVDAALVDPHTLDGRTVDVKRALSREEQQAAKAANPSAG 97
Query: 54 ---------------------------FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEH 86
+TKKIFVGG+PS++ EDEF+ +F +G V +
Sbjct: 98 GRHASGGGGGGGGAGGGGGGGGGDAGGARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDV 157
Query: 87 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
+M D +T R RG E AVD +L K +L+G VEVK+A P++ N
Sbjct: 158 VVMYDQNTQRPRG-SVHHLRREDAVDRVLHKTFH-DLSGKMVEVKRALPREAN 208
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI E++ +D F +GDV + +MRD T R RGFGF+ F +VD L
Sbjct: 7 KLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAALVD 66
Query: 118 GNKLELAGAQVEVKKA 133
+ L+ G V+VK+A
Sbjct: 67 PHTLD--GRTVDVKRA 80
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 95 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 154
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 155 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 214
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 215 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 244
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 63 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 122
Query: 117 KGNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 123 -SRPHTLDGRNIDPKPCTPR 141
>gi|328783731|ref|XP_623522.3| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform 2
[Apis mellifera]
Length = 486
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Query: 10 RGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSV 68
+GFGF+T+ADP+ VDKV+ H ++GK+++ K P+ +TKKIFVGG+ +
Sbjct: 139 KGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT 198
Query: 69 NEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 128
++ K++F QFG +++ +M D T+R RGFGF+TF +E VD + + + E+ V
Sbjct: 199 TLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIHFHEINNKMV 257
Query: 129 EVKKAEPKKPNLP 141
E KKA+PK+ LP
Sbjct: 258 ECKKAQPKEVMLP 270
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF-KTK 57
M D++T + RGFGFVT+ VVDKV E H IN K VE K+ PK + + KT+
Sbjct: 219 MFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTR 277
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 91 DHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
D S S +GFGFITF +VD +LA+GN EL G +++ K A P++
Sbjct: 132 DVSLSCVKGFGFITFADPASVDKVLAQGNH-ELDGKKIDPKVAFPRR 177
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ADP V V+ H++ ++++ KR IP+ + KK+
Sbjct: 32 MRDSVTQRSRGFGFVTFADPKSVTDVLSSGPHVVCDREIDPKRAIPRSSSDPASTTIKKL 91
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
F+GG+ SS+NED K++F+QFG++++ RD T R RGFGFITF TE+A + +L +
Sbjct: 92 FLGGLASSMNEDSIKNYFVQFGEIEDALCQRDRDTGRPRGFGFITFKTEEAAESVLRQ 149
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI + NE+ D+F ++G V + +MRD T RSRGFGF+TF ++V D+L+
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 118 GNKLELAGAQVEVKKAEPKKPNLP 141
G + + +++ K+A P+ + P
Sbjct: 61 GPHV-VCDREIDPKRAIPRSSSDP 83
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGFVT+AD + VDKV+ H ++GK+++ K P+ A +TKKI
Sbjct: 34 MKDPTTRRSRGFGFVTFADAASVDKVLASAPHELDGKKIDPKVAFPRRAHPKMVTRTKKI 93
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + D+ K +F QFG V++ +M D T+R RGF F+TF++E VD + + +
Sbjct: 94 FVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDK-VCEIH 152
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
E+ VE KKA+PK+ LP
Sbjct: 153 FHEINNKMVECKKAQPKEVMLP 174
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ + + +++F +FGDV E +M+D +T RSRGFGF+TF +VD +LA
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
EL G +++ K A P++
Sbjct: 62 SAPH-ELDGKKIDPKVAFPRR 81
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 70 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 129
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 130 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 188
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 189 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 248
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 249 SYTGLAPGY 257
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SR 100
Query: 121 LELAGAQVEVKKAEPKK 137
EL ++ K A P++
Sbjct: 101 HELDSKTIDPKVAFPRR 117
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|431914268|gb|ELK15526.1| RNA-binding protein Musashi like protein 1 [Pteropus alecto]
Length = 281
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 1 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 60
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 61 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 119
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 120 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 179
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 180 SYTGLAPGY 188
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPEQTRPKEGW 101
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 102 KGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 161
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 DEQSVDQAVNMHFR-DIMGKKVEVKRAEPR 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 67 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 126
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 127 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 186
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 187 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 216
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 35 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 94
Query: 117 KGNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 95 -SRPHTLDGRNIDPKPCTPR 113
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 27/162 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKG------AVGSKDF 54
M+++ TG+PRGFGFV + + + D +++ H+I+G+ +++KR +P+ A ++
Sbjct: 93 MRNKITGEPRGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNS 152
Query: 55 K--------------------TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHST 94
T KIFVGG+ VN+ +F+ +F +FG V++ +M D T
Sbjct: 153 ANARGGSQVGGRHGGMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKT 212
Query: 95 SRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
RSRGFGFIT+D+ V +++ G EL G VEVK A P+
Sbjct: 213 GRSRGFGFITYDSPDIVRKVMSGGTH-ELKGKSVEVKTAAPR 253
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ ED K F ++G + + +MR+ T RGFGF+ F + D L +
Sbjct: 62 KIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKE 121
Query: 118 GNKLELAGAQVEVKKAEPK-KPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGF 176
+ ++ G ++VK+A P+ + LP+ + R N+ GS G +GG F
Sbjct: 122 EHVID--GRTIDVKRAVPRDRAPLPRAAADR-NSANARGGSQVGGRHGGMNDAPLTNKIF 178
Query: 177 GG 178
G
Sbjct: 179 VG 180
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 102 KGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 161
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 DEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 91 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 150 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 209
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 210 SYTGIAPGY 218
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 60 SRHELDSKTIDPKVAFPRR 78
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+AD + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 258 MRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 317
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 318 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 376
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 377 FHEINNKMVECKKAQPKE 394
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 242 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKVLAQ-SRHELDSKTIDPKV 300
Query: 133 AEPKK 137
A P++
Sbjct: 301 AFPRR 305
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 125 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 184
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 185 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 244
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 245 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 274
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 18 ADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFF 77
DP V V+ D + G Q T P + + +K+FVGG+ S ++ + +F
Sbjct: 64 VDP-CVPAVVSDAGSVLGSQ-----TYPVDVMA----EARKLFVGGLDWSTTQETLRSYF 113
Query: 78 MQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
Q+G+V + IM+D +T++SRGFGF+ F V +LA L G ++ K P+
Sbjct: 114 SQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA-SRPHTLDGRNIDPKPCTPR 171
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 113 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 172 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 231
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 232 SYTGIAPGY 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 82 -SRHELDSKTIDPKVAFPRR 100
>gi|441656584|ref|XP_003277097.2| PREDICTED: DAZ-associated protein 1 [Nomascus leucogenys]
gi|119589910|gb|EAW69504.1| DAZ associated protein 1, isoform CRA_d [Homo sapiens]
Length = 337
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 1 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 60
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 61 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 120
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 121 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 150
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 102 KGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 161
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 DEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 113 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 172 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 231
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 232 SYTGLAPGY 240
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 82 -SRHELDSKTIDPKVAFPRR 100
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 19 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 78
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 79 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 137
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 138 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 197
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 198 SYTGLAPGY 206
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 61
Query: 133 AEPKK 137
A P++
Sbjct: 62 AFPRR 66
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTPPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 244 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 303
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 304 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 363
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 364 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 393
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +
Sbjct: 210 RPLKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 269
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
LA L G ++ K P+
Sbjct: 270 LA-SRPHTLDGRNIDPKPCTPR 290
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 108 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 167
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 168 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 227
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 228 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 257
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 46 KGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
+ ++ S+ + KK+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F
Sbjct: 65 RESMPSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 124
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
V +LA L G ++ K P+
Sbjct: 125 KDPNCVGTVLA-SRPHTLDGRNIDPKPCTPR 154
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 125 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 184
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 185 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 243
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 244 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 303
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 304 SYTGLAPGY 312
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 109 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 167
Query: 133 AEPKK 137
A P++
Sbjct: 168 AFPRR 172
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF----- 54
MKD T + RGFGFV + DP V + HI++G+ ++ K P+
Sbjct: 40 MKDPITQRSRGFGFVKFKDPVCVQTALAGAPHILDGRTIDPKPCTPRSQQQKTQQMGQFS 99
Query: 55 -KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+ KK+F+GGIP + NED+ +FF QFG V E +M D R RGFGF++F++E V+
Sbjct: 100 GRVKKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEK 159
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
+ + G VE KKAEP+
Sbjct: 160 VCTI-RYHTINGKTVECKKAEPR 181
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ +D + FM++G+V + IM+D T RSRGFGF+ F V LA
Sbjct: 9 KIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTALAG 68
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L G ++ K P+
Sbjct: 69 APHI-LDGRTIDPKPCTPR 86
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 102 KGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 161
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 DEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 1 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 60
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 61 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 120
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 121 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 150
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 34 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 93
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 94 KGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 153
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 154 DEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 182
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 61
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 62 SRPHTLDGRNIDPKPCTPR 80
>gi|443897375|dbj|GAC74716.1| nuclear porin [Pseudozyma antarctica T-34]
Length = 694
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 17/168 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG---------- 50
M+D TG+ RGF F+ + DP V+ V+ H ++GK ++ KR IP+
Sbjct: 298 MRDANTGRSRGFAFLNFVDPKAVNTVMVREHYLDGKVIDPKRAIPRPQQSHHGLGGGFGA 357
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
+ +K+FVGG+P+SV + F+ FF QFG + E M D T R RGFGF+T+ + +
Sbjct: 358 GQPAANQKLFVGGLPASVTPESFRTFFEQFGTLSECTCMMDRETGRPRGFGFLTYADDAS 417
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP----SYRRYNNPKPA 154
++ +L+ N + G +V+VK+A+ K N PQ +R++NP A
Sbjct: 418 LERILS-ANPIMFDGKEVDVKRAQSK--NDPQSLQLRRQQRFDNPDAA 462
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED + +F QFG+V +MRD +T RSRGF F+ F +AV+ ++ +
Sbjct: 267 KMFVGGLNWDTTEDSLRRYFSQFGEVGHCTVMRDANTGRSRGFAFLNFVDPKAVNTVMVR 326
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSY 145
+ L+ G ++ K+A P+ PQ S+
Sbjct: 327 EHYLD--GKVIDPKRAIPR----PQQSH 348
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 91 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 150 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 209
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 210 SYTGLAPGY 218
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 60 SRHELDSKTIDPKVAFPRR 78
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 ----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+
Sbjct: 102 KGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFE 161
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 DEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 32 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 91
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 92 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 151
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 152 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 181
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 59
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 60 SRPHTLDGRNIDPKPCTPR 78
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGSRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE------DTHIINGKQVEIKRTIPKGAVGSKDF 54
M+D T +PRGFGFVT+ D + V++V++ D I+ K +K P GS +
Sbjct: 44 MQDPMTKRPRGFGFVTFTDQASVEEVMKNGPHTLDNKTIDPKPATMKSATPPSQGGSFNG 103
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ KK+FVGGI + ED+ + FF QFG V E + D +T R RGFGF+ FD+E V D
Sbjct: 104 RVKKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVV-DR 162
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
L + + ++ G VEVKKAEP+
Sbjct: 163 LCQIHFHQINGKTVEVKKAEPR 184
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ ED K +F ++G+V + IM+D T R RGFGF+TF + +V++++
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKN 72
Query: 118 GNKLELAGAQVEVKKAEPKKPNLP 141
G L ++ K A K P
Sbjct: 73 GPHT-LDNKTIDPKPATMKSATPP 95
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 19 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 78
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 79 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 138
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 139 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 168
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
+ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA L G ++
Sbjct: 1 ETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA-SRPHTLDGRNIDP 59
Query: 131 KKAEPK 136
K P+
Sbjct: 60 KPCTPR 65
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 53 MRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 112
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 113 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 171
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 172 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 231
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 232 SYTGIAPGY 240
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 82 -SRHELDSKTIDPKVAFPRR 100
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 59 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 118
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 119 QKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 178
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 179 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 208
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
+ KT+K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V
Sbjct: 23 ELKTRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 82
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
+LA L G ++ K P+
Sbjct: 83 TVLA-SRPHTLDGRNIDPKPCTPR 105
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 88 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 147
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 148 QKGPRSDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 207
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 208 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 237
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 42 RTIPKGAVGSKDFK--TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
R++P+G +D ++K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRG
Sbjct: 39 RSLPQGHGEDRDSPPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRG 98
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
FGF+ F V +LA L G ++ K P+
Sbjct: 99 FGFVKFKDPNCVGTVLA-SRPHTLDGRNIDPKPCTPR 134
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 19 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 78
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 79 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 137
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 138 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 197
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 198 SYTGLAPGY 206
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 61
Query: 133 AEPKK 137
A P++
Sbjct: 62 AFPRR 66
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ T H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 112 FVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYAGITPGY 239
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K++F ++G+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK--PNL 140
+ EL ++ K A P++ P L
Sbjct: 81 -TRHELDSKTIDPKVAFPRRAQPKL 104
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 56 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 115
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 116 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 174
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 175 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 234
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 235 SYTGLAPGY 243
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 85 -SRHELDSKTIDPKVAFPRR 103
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVTYA+ + V+KV+ ++ H ++ K ++ K P+ A +TKKI
Sbjct: 54 MRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 114 FVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 173 FHEINNKMVECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSR 232
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 233 SYSGIAPGY 241
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K++F +FG+V+E +MRD T RSRGFGF+T+ + V+ +LA+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK--PNL 140
N+ EL ++ K A P++ P L
Sbjct: 83 -NRHELDSKTIDPKVAFPRRAQPKL 106
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSK------- 52
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G +
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 53 ------DF-KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
D+ K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDYSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 37 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 96
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 97 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 156
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 157 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 186
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 64
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 65 SRPHTLDGRNIDPKPCTPR 83
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 42 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 101
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 102 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 160
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 161 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 220
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 221 SYTGLAPGY 229
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 26 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 84
Query: 133 AEPKK 137
A P++
Sbjct: 85 AFPRR 89
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 80 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 139
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 140 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 199
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 200 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 229
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ KG + +K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+
Sbjct: 35 LCKGGLAVDRIAPRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFV 94
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
F V +LA L G ++ K P+
Sbjct: 95 KFKDPNCVGTVLA-SRPHTLDGRNIDPKPCTPR 126
>gi|426374423|ref|XP_004054073.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Gorilla
gorilla gorilla]
Length = 303
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 4 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 63
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 64 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 122
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 123 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 182
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 183 SYTGLAPGY 191
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 88 IMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K A P++
Sbjct: 3 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKVAFPRR 51
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 50 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 109
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 110 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 168
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 169 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 228
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 229 SYTGLAPGY 237
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 52 KDFKTKKIFVGGIPSSVNEDE----------FKDFFMQFGDVQEHQIMRDHSTSRSRGFG 101
KD ++ FV +P V D +++F QFG+V+E +MRD T RSRGFG
Sbjct: 3 KDSASRAPFVAALPGCVQRDCTALGAPACEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 62
Query: 102 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F+TF + VD +LA+ ++ EL ++ K A P++
Sbjct: 63 FVTFMDQAGVDKVLAQ-SRHELDSKTIDPKVAFPRR 97
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 131 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 190
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 191 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 250
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 251 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 280
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 99 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 158
Query: 117 KGNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 159 -SRPHTLDGRNIDPKPCTPR 177
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 200 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 259
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 260 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 318
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 319 FHEINNKMVECKKAQPKE 336
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 126
V + +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL
Sbjct: 178 CVVTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSK 236
Query: 127 QVEVKKAEPKK 137
++ K A P++
Sbjct: 237 TIDPKVAFPRR 247
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 76 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 135
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 136 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 195
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 196 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 225
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 38 VEIKRTIPKGAVGSKDFKTK-KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSR 96
V++KR + G V K+FVGG+ S ++ + +F Q+G+V + IM+D +T++
Sbjct: 24 VKLKRGLEPGLVRRVPSSISGKLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQ 83
Query: 97 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
SRGFGF+ F V +LA L G ++ K P+
Sbjct: 84 SRGFGFVKFKDPNCVGTVLA-SRPHTLDGRNIDPKPCTPR 122
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVTYA+ + V+KV+ ++ H ++ K ++ K P+ A +TKKI
Sbjct: 54 MRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 114 FVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 173 FHEINNKMVECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSR 232
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 233 SYSGIAPGY 241
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K++F +FG+V+E +MRD T RSRGFGF+T+ + V+ +LA+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
N+ EL ++ K A P++
Sbjct: 83 -NRHELDSKTIDPKVAFPRR 101
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSK------- 52
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G +
Sbjct: 71 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 130
Query: 53 -------DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
+ K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 131 QKGPRNDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 190
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 191 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 220
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+T K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +
Sbjct: 37 QTWKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 96
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
LA L G ++ K P+
Sbjct: 97 LA-SRPHTLDGRNIDPKPCTPR 117
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 101
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 102 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 161
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|392575433|gb|EIW68566.1| hypothetical protein TREMEDRAFT_74094 [Tremella mesenterica DSM
1558]
Length = 466
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 8/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGF F+TY DP+ V KV+ TH ++GKQ++ KR IP+ ++ KT K+F
Sbjct: 143 MRD-PTGRSRGFAFLTYVDPASVTKVLGQTHHLDGKQIDPKRAIPR----AEHEKTAKVF 197
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ-AVDDLLAKGN 119
VGG+ ++V + + F FG V + +M D T+RS+GF F TF+ E + + A G+
Sbjct: 198 VGGLAATVTSESLRTFLSTFGGVLDATVMIDRDTNRSKGFAFATFENEDGVLKAMEASGS 257
Query: 120 KLELAGAQVEVKKAEPK 136
EL G Q+E++KA+P+
Sbjct: 258 --ELDGKQIEIRKAQPR 272
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ +++ + + +FG++ +MRD T RSRGF F+T+ +V +L +
Sbjct: 112 KMFIGGLNWETTDEKLRAYMSEFGEIDACTVMRD-PTGRSRGFAFLTYVDPASVTKVLGQ 170
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G Q++ K+A P+
Sbjct: 171 THHLD--GKQIDPKRAIPR 187
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M DR T + +GF F T+ + V K +E + ++GKQ+EI++ P+GA
Sbjct: 226 MIDRDTNRSKGFAFATFENEDGVLKAMEASGSELDGKQIEIRKAQPRGA 274
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 19 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 78
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 79 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 137
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 138 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVVPYGMDAFMLGIGMLGYPGFQATTYASR 197
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 198 SYTGLAPGY 206
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 61
Query: 133 AEPKK 137
A P++
Sbjct: 62 AFPRR 66
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 101 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 160
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 161 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 219
Query: 120 KLELAGAQVEVKKAEPKK 137
E+ VE KKA+PK+
Sbjct: 220 FHEINNKMVECKKAQPKE 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+++F QFG+ +E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K
Sbjct: 85 LREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKV 143
Query: 133 AEPKK 137
A P++
Sbjct: 144 AFPRR 148
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 45 PKGAVGSKD--FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
P+ + S D + K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF
Sbjct: 6 PQPGLASPDSPYDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 65
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+TF + VD +LA+ ++ EL ++ K A P++
Sbjct: 66 VTFMDQAGVDKVLAQ-SRHELDSKTIDPKVAFPRR 99
>gi|149063557|gb|EDM13880.1| rCG21724, isoform CRA_a [Rattus norvegicus]
Length = 311
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 1 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 60
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 61 FVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 119
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 120 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 179
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 180 SYTGLAPGY 188
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 39 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGW 98
Query: 51 -----SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 105
S K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF
Sbjct: 99 QKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 158
Query: 106 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 159 EDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 188
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +L
Sbjct: 6 CRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 65
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
A L G ++ K P+
Sbjct: 66 A-SRPHTLDGRNIDPKPCTPR 85
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 14 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 73
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 74 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 132
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 133 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 192
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 193 SYTGLAPGY 201
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 80 FGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
FG+V+E +MRD T RSRGFGF+TF + VD +LA+ ++ EL ++ K A P++
Sbjct: 5 FGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ-SRHELDSKTIDPKVAFPRR 61
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVTYA+ + V+KV+ ++ H ++ K ++ K P+ A +TKKI
Sbjct: 54 MRDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKI 113
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + + +
Sbjct: 114 FVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK-VCEIH 172
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 173 FHEINNKMVECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSR 232
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 233 SYSGIAPGY 241
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K++F +FG+V+E +MRD T RSRGFGF+T+ + V+ +LA+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
N+ EL ++ K A P++
Sbjct: 83 -NRHELDSKTIDPKVAFPRR 101
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 89/137 (64%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+
Sbjct: 39 MKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKV 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ +
Sbjct: 99 FLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEH-VTNER 157
Query: 120 KLELAGAQVEVKKAEPK 136
+ L G QVE+KKAEP+
Sbjct: 158 YINLNGKQVEIKKAEPR 174
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ +F +FGD+ + +M+++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G L G ++ K P+ P+
Sbjct: 68 GPHT-LDGRTIDPKPCNPRTLQKPK 91
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGF+T+ DP VD V+ ++GK+++ K +PK A TKKI
Sbjct: 32 MRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKIDPKLAVPKRAPAKMVTTTKKI 91
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GG+ ++ +E++ K +F QFG + E +M D +T R RGFGF+TF++E + D
Sbjct: 92 FIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACDTQY 151
Query: 120 KLELAGAQVEVKKAEPKK 137
L + +VEVKKA+PK+
Sbjct: 152 HL-INNKKVEVKKAQPKE 168
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ + + F +FG+++E +MRD T RSRGFGF+TF +AVD +L
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 118 GNKLELAGAQVEVKKAEPKK 137
G + EL G +++ K A PK+
Sbjct: 61 GAQ-ELDGKKIDPKLAVPKR 79
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 93/138 (67%), Gaps = 9/138 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDK-VIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
++D T + RGFGF+ Y + S +DK ++ TH+I+GKQVE KR++P+ +TKKI
Sbjct: 35 LRDPVTKRSRGFGFIIYRNVSDIDKALLHATHVIDGKQVEPKRSVPREQT-----RTKKI 89
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ-AVDDLLAKG 118
F+GG+P + ++++ K +F ++G V E +++RD T R RGFGF++FDT + A L+ K
Sbjct: 90 FIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKALVTKM 149
Query: 119 NKLELAGAQVEVKKAEPK 136
+ E+ G +VKKAEPK
Sbjct: 150 H--EINGKMAQVKKAEPK 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E+ F++ F +FG+V I+RD T RSRGFGFI + +D L
Sbjct: 3 RKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALL 62
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G QVE K++ P++
Sbjct: 63 HATHV-IDGKQVEPKRSVPRE 82
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGA-VGSKDFKTKK 58
+KD T + RGFGF+T+A+ S VD+V+ H ++GK+++ K PK + KTKK
Sbjct: 55 LKDPLTQRSRGFGFITFAEASSVDRVLAVPAHTLDGKKIDPKHATPKNKGKATPSSKTKK 114
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ + DE K +F QFG V+E ++ D T R RGFGF+TF++E VD + +
Sbjct: 115 VFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDR-ICEI 173
Query: 119 NKLELAGAQVEVKKAEPKKPNL 140
+ + +VE KKA+PK+ L
Sbjct: 174 HYHTIKNKKVECKKAQPKEAIL 195
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D K+FVGG+ + D+ +++F Q+G + + Q+++D T RSRGFGFITF +VD
Sbjct: 19 DLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVD 78
Query: 113 DLLAKGNKLELAGAQVEVKKAEPK 136
+LA L G +++ K A PK
Sbjct: 79 RVLAVPAH-TLDGKKIDPKHATPK 101
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD T + RGFGF+T+ + + VDKV+ H ++GK+++ K PK A K KTKKI
Sbjct: 62 MKDPVTQRSRGFGFITFQEAASVDKVLAVPVHTLDGKRIDPKHATPKSA--PKPAKTKKI 119
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + DE + +F QFG V++ ++ D T R RGFGF+TF +E+AV+ + +
Sbjct: 120 FVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVER-VCDIH 178
Query: 120 KLELAGAQVEVKKAEPKK 137
+ +VE K+A+PK+
Sbjct: 179 FHTIKNKKVECKRAQPKE 196
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + ++ +++F FG V + IM+D T RSRGFGFITF +VD +LA
Sbjct: 31 KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDKVLAV 90
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPS 144
L G +++ K A PK + P+P+
Sbjct: 91 PVH-TLDGKRIDPKHATPK--SAPKPA 114
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 17/152 (11%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVG--------- 50
MKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G
Sbjct: 42 MKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGW 101
Query: 51 ------SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+++ ++ KIFVGGIP + E E K++F +FG V E ++ D R RGFGFIT
Sbjct: 102 QQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFIT 161
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
F+ EQ+VD + + ++ G +VEVK+AEP+
Sbjct: 162 FEDEQSVDQAV-NMHFHDIMGKKVEVKRAEPR 192
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ S ++ + +F Q+G+V + IM+D +T++SRGFGF+ F V +LA
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA- 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
L G ++ K P+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEK-ICDIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSVRGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGIAPGY 239
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F FGDV+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 31 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 90
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 91 FVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 149
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 150 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 209
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 210 SYTGLAPGY 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ- 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 60 SRHELDSKTIDPKVAFPRR 78
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGLAPGY 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F QFG+V+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 52 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 111
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF+ E V+ + +
Sbjct: 112 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEK-ICDIH 170
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 171 FHEINNKMVECKKAQPKEVMSPTGSVRGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASR 230
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 231 SYTGIAPGY 239
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ +++F FGDV+E +MRD T RSRGFGF+TF + VD +LA+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 118 GNKLELAGAQVEVKKAEPKK 137
++ EL ++ K A P++
Sbjct: 81 -SRHELDSKTIDPKVAFPRR 99
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPK-GAVGSKDFKTKK 58
M D + + RGFGFVTYAD +VD+ + + HII+ + VE KR IP+ + G + KK
Sbjct: 55 MTDPYSKRSRGFGFVTYADSQMVDQAMAQRPHIIDNRTVEPKRAIPREQSSGDTNMSVKK 114
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ + ++ +++F ++G ++E I + T R RGFGF+TFD +VD ++ +
Sbjct: 115 LFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQR 174
Query: 119 NKLELAGAQVEVKKA 133
+ + + G + EVKKA
Sbjct: 175 HHM-IKGKRTEVKKA 188
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ NE K+++ ++G++ + +M D + RSRGFGF+T+ Q VD +A
Sbjct: 23 RKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQAMA 82
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + + VE K+A P++
Sbjct: 83 QRPHI-IDNRTVEPKRAIPRE 102
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT+A+PS+V+ V+++ H ++G+ ++ K P+ K +
Sbjct: 45 MKNSESGRSRGFGFVTFAEPSLVNVVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS++ E + + FF ++G V E IM D +SRGFGF++F+ E +V+ +
Sbjct: 104 -KVFLGGLPSNITETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVER-VT 161
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 162 QEHFINLNGKQVEIKRAEPR 181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +++ + +F ++GDV + +M++ + RSRGFGF+TF V+ +L
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G +L G ++ K P+ P+
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTLQKPK 97
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 114/226 (50%), Gaps = 29/226 (12%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ HIIN K+V+ PK A +T KIFV
Sbjct: 74 DPTTGRSRGFAFIVYKSADSIDKVVAAGDHIINNKKVD-----PKKAKA----RTGKIFV 124
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++DE + +F QFG++ E ++ D ++ + F FITFD+E V++LL K K
Sbjct: 125 GGLIPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQRKAFCFITFDSETVVNELL-KTPKQ 183
Query: 122 ELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGG 181
++G +V+VKKA PK N P + GG G G G G
Sbjct: 184 TISGKEVDVKKATPKPDNAPMMNI----------------RGGGGGRNMRGGRGGRQFQG 227
Query: 182 GGGGGGYRSS-GAYGVRGGGYGGYGVGGEFGGY-GGYGGGMGAYRG 225
G GG Y SS G YG GG + G + Y GGYGG M Y G
Sbjct: 228 GNWGGNYSSSGGPYGQSGGSWNQGNWGSNYDNYQGGYGGPMDGYYG 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F Q+G++ + D +T RSRGF FI + + ++D ++A
Sbjct: 40 RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDKVVA 99
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 100 AGDHI------INNKKVDPKK 114
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ RGF F+T+ DP+ V+KV+ H ++GK ++ KR IP+ ++ +T K+F
Sbjct: 31 MRD-PAGRSRGFAFLTFEDPAAVNKVMVQEHYLDGKIIDPKRAIPR----TEHQRTVKMF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV + K++F QFG V + +M D +SRS+GFGF+TFD + + L
Sbjct: 86 VGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAERLFGMPG- 144
Query: 121 LELAGAQVEVKKAEPK 136
L + G +EVK A+P+
Sbjct: 145 LAIDGKTIEVKMAQPR 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ +D +++F QFG V+ IMRD + RSRGF F+TF+ AV+ ++ +
Sbjct: 1 MFVGGLNWDTTDDGLRNYFSQFGRVEACTIMRDPA-GRSRGFAFLTFEDPAAVNKVMVQE 59
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 60 HYLD--GKIIDPKRAIPR 75
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D + + RGFGFVTYADP V+ + H+I+GK+VE KR +PK + + K
Sbjct: 59 MRDPVSKRSRGFGFVTYADPEQVNAAMAARPHLIDGKEVEPKRAMPKDVMNKPEAHISVK 118
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+++ GI ED +++FMQ+G VQE I D T + RGF F+TFD VD ++ +
Sbjct: 119 KVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLE 178
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+ + + + +VKKA L + +R + G GG G
Sbjct: 179 KSHM-IDNKRCDVKKA------LSKEEMKRIQQQDFDRQQRDARSRGMMRGGYTPNRSMG 231
Query: 178 GSGGGGGGGGYRSSGAY-GVRGGGYGGYG 205
G GG R SG + G G +GG+
Sbjct: 232 DMGMPYGGASSRWSGGHGGNMAGNHGGWA 260
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
+ KD + +KIF+GGI + ++++ + F+ ++G++ + +MRD + RSRGFGF+T+
Sbjct: 19 LPEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADP 78
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKAEPKKP-NLPQPSYRRYNNPKPAYGSGFGDAY 163
+ V+ +A L + G +VE K+A PK N P+ + + K Y SG D +
Sbjct: 79 EQVNAAMAARPHL-IDGKEVEPKRAMPKDVMNKPEA----HISVKKVYISGIKDEH 129
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKI
Sbjct: 8 MRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKI 67
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++ K +F QFG V + +M D +T+R RGFGF+TF++E V+ + + +
Sbjct: 68 FVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIH 126
Query: 120 KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGS 179
E+ VE KKA+PK+ P S R + P F G G GF +
Sbjct: 127 FHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASR 186
Query: 180 GGGGGGGGY 188
G GY
Sbjct: 187 SYTGLAPGY 195
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 82 DVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+V+E +MRD T RSRGFGF+TF + VD +LA+ EL ++ K A P++
Sbjct: 1 EVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH-ELDSKTIDPKVAFPRR 55
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSK----DFKT 56
KD T + RGFGFVT+ DP V+ V+ H+++GKQ++ K + KG + + T
Sbjct: 41 KDPVTQRSRGFGFVTFEDPGCVNSVLNAGPHLLDGKQIDPKPAVQKGQPAPQASPSNVNT 100
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+ + +EDE K +F FG V+ Q+M D +T R RGFGF+TF+ ++ V
Sbjct: 101 NKVFIGGVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKKTCG 160
Query: 117 KGNKLELAGAQVEVKKAEPKKPN 139
+ + G VEVK AE + N
Sbjct: 161 V-HFHNINGKSVEVKLAEDRSAN 182
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
S+D T KIFVGG+ + D K FF ++G+V + I +D T RSRGFGF+TF+
Sbjct: 2 SRDNDTGKIFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFEDPGC 61
Query: 111 VDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPK 152
V+ +L G L L G Q++ K A K PQ S N K
Sbjct: 62 VNSVLNAGPHL-LDGKQIDPKPAVQKGQPAPQASPSNVNTNK 102
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIK----RTIPKGAVGSK 52
M D+ T + RGFGFVT+ + V K H INGK VE+K R+ +G GS+
Sbjct: 133 MYDKTTKRMRGFGFVTFENDETVKKTCGVHFHNINGKSVEVKLAEDRSANRGVPGSQ 189
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|297798166|ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312803|gb|EFH43226.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 5/154 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFG+VT+A ++ H + + +E+K PK + K +IF
Sbjct: 35 MKDRSTGRSRGFGYVTFASSEDAKNALKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIF 94
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IPSSV+E +F+ F ++G++ + + +DH++ + RG GFITF + +V+DL+ +
Sbjct: 95 VARIPSSVSESDFRSHFERYGEITDLYMPKDHNSKQHRGIGFITFSSADSVEDLMEDTH- 153
Query: 121 LELAGAQVEVKKAEPKK---PNLPQPSYRRYNNP 151
+L G V V +A PK+ P P P R P
Sbjct: 154 -DLGGTTVAVDRATPKEDDHPPRPPPVARMSRPP 186
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+ V GIP ++ D KD+ +FGD+++ +M+D ST RSRGFG++TF + + + L
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKNAL- 61
Query: 117 KGNKLELAGAQVEVKKAEPKKPNLPQPS 144
KG L +EVK A PK+ + QP+
Sbjct: 62 KGEHF-LGNRILEVKVATPKE-EMRQPA 87
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVG +P + D+ +++F +FG +Q+ I +D S RGFGF+TF E V D +A+
Sbjct: 242 KIFVGRLPQEASVDDLREYFGRFGRIQDAYIPKDPKRSGHRGFGFVTF-AENGVADCVAR 300
Query: 118 GNKLELAGAQVEVKKAEP 135
+ E+ G +V + A P
Sbjct: 301 RSH-EICGQEVAIDSATP 317
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 18/258 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TYA +VD H I+G+ VE KR +PK +G + K
Sbjct: 40 MKDPQTKRSRGFGFITYAAAHMVDDAQGARPHKIDGRTVEPKRAVPKTDIGKPEAGATVK 99
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + S+ E++ K++F +G+V ++ T + RGFGF+ FD VD + K
Sbjct: 100 KLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICLK 159
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYG------GYGGGGF 171
G+ + + G +++VKKA K+ + + + R +N +GS +A+ G GGG
Sbjct: 160 GSHI-IKGKKIDVKKALSKE-EMARVNARNNSNSADNWGSDNRNAWEPTMRNFGRGGGWR 217
Query: 172 AGGG-----FGGSGGGGGGGGYRSSGAYGVRGGGY-GGYGVGGEFGGYGGYGGGMGAYRG 225
+G G S GG GG +S GY +G G G G GG GA R
Sbjct: 218 SGNDPDPWESGPSSRGGNWGGPSTSAWDNSFSDGYQQSFGAGPIRGSNGPLRGG-GAARP 276
Query: 226 EPSSLGYSGRYGGFNRGY 243
P + G+ Y F+ G+
Sbjct: 277 GPYNSGFDSGYNDFSSGF 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL- 115
+K+FVGG+ ++ K +F Q+G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 8 RKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQG 67
Query: 116 AKGNKLELAGAQVEVKKAEPK 136
A+ +K++ G VE K+A PK
Sbjct: 68 ARPHKID--GRTVEPKRAVPK 86
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
GA G +D +K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F
Sbjct: 47 GASGQRD-DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFT 105
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A+D + A + + KK +PKK
Sbjct: 106 NTEAIDKVSAADEHI------INSKKVDPKK 130
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 ADEHI------INSKKVDPKK 130
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 93/143 (65%), Gaps = 13/143 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTK-- 57
MK+ ++G+ RGFGFVT+ADPS+V+ V+++ H ++G+ ++ K P+ K K
Sbjct: 39 MKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQ-----KPKRG 93
Query: 58 ----KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
K+F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+
Sbjct: 94 GGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVER 153
Query: 114 LLAKGNKLELAGAQVEVKKAEPK 136
+ + + + L G QVE+K+AEP+
Sbjct: 154 -VTQEHFINLNGKQVEIKRAEPR 175
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +++ + +F ++G+V + +M++ + RSRGFGF+TF V+ +L
Sbjct: 8 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 67
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G +L G ++ K P+ P+
Sbjct: 68 GPH-QLDGRTIDPKPCNPRTLQKPK 91
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD---FKT 56
MK+ ++G+ RGFGFVT+ADPS+V+ V+++ H ++G+ ++ K P+ K +
Sbjct: 45 MKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP- 103
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+PS+V E + + FF ++G V E IM D +SRGFGF++F+ E +V+ +
Sbjct: 104 -KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVER-VT 161
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + L G QVE+K+AEP+
Sbjct: 162 QEHFINLNGKQVEIKRAEPR 181
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +++ + +F ++G+V + +M++ + RSRGFGF+TF V+ +L
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 73
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQ 142
G +L G ++ K P+ P+
Sbjct: 74 GPH-QLDGRTIDPKPCNPRTLQKPK 97
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV D HIIN K+V+ PK A + KIFV
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIDKVSAVDEHIINSKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + + ++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 141 GGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 199
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 200 KIAGKEVDVKRATPKPEN 217
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
GA G +D +K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F
Sbjct: 47 GASGQRD-DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFT 105
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A+D + A + + KK +PKK
Sbjct: 106 NTEAIDKVSAVDEHI------INSKKVDPKK 130
>gi|302838536|ref|XP_002950826.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
gi|300263943|gb|EFJ48141.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
Length = 303
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFGFVT+ DP+ + + H I+G++ E K +PKG +T +IF
Sbjct: 32 MKDRYTGKSRGFGFVTFIDPASATRALSVEHTIDGRRCEAKVALPKGEPSPP--RTTRIF 89
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IP SV E +FK +F FG +Q+ + +DHS RG GF+TF + +V+ ++A K
Sbjct: 90 VARIPPSVTESQFKQYFEGFGKLQDAYMPKDHSKQGYRGIGFVTFASPDSVEKVMA--VK 147
Query: 121 LELAGAQVEVKKAEPKK 137
+ G ++ + +A PK+
Sbjct: 148 HWMNGHEIAIDRATPKE 164
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 46/172 (26%)
Query: 10 RGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS---------------KDF 54
RG GFVT+A P V+KV+ H +NG ++ I R PK + + F
Sbjct: 127 RGIGFVTFASPDSVEKVMAVKHWMNGHEIAIDRATPKEEPAALKNIFARLPMGPGQRRSF 186
Query: 55 KTK-----------------------------KIFVGGIPSSVNEDEFKDFFMQFGDVQE 85
+ +IF+G + E + K++FM+FG V +
Sbjct: 187 DNEAGGGLARFGGGSWDVLGAEYGHGAGGAGPRIFIGKLTKDTGEADVKEYFMRFGYVMD 246
Query: 86 HQIMR-DHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
+ + + + RGFGF+TF+T+ A+ +++ G L G+ + + A PK
Sbjct: 247 VYLPKAKDNKAEHRGFGFVTFETDAAIQRVVSHGQH-RLKGSTIAIDIAMPK 297
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+ V G+P ED K +F Q+G ++ ++M+D T +SRGFGF+TF + L+
Sbjct: 1 KLAVLGLPWETTEDTLKAYFSQYGTLECAEVMKDRYTGKSRGFGFVTFIDPASATRALSV 60
Query: 118 GNKLE--LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYG 167
+ ++ A+V + K EP P + R P S F + G+G
Sbjct: 61 EHTIDGRRCEAKVALPKGEPSPPRTTRIFVARI--PPSVTESQFKQYFEGFG 110
>gi|242018680|ref|XP_002429802.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212514814|gb|EEB17064.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 486
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKI 59
MKD K+ + RGFGF+TY+ S+VD + + HII+G+QVE KR +P+ + +K+
Sbjct: 60 MKDPKSRRSRGFGFITYSKASMVDDAMNNRPHIIDGRQVEPKRAVPRDLCSRSEANVRKL 119
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
F+GGI +V +D+ +++F ++G + + I+ T RGFGF+ ++ + D ++ +
Sbjct: 120 FIGGIGKAVTKDDLEEYFQKYGRLTDCAIVVTKDTGEPRGFGFVEYEDVDSADKVILIRD 179
Query: 120 KLELAGAQVEVKKA 133
E+ G VE+KKA
Sbjct: 180 H-EIKGRHVEIKKA 192
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ S +D K+F+ ++G V + +M+D + RSRGFGFIT+ VDD
Sbjct: 26 QLRKMFIGGLDYSTTDDGLKEFYEKWGMVVDVVVMKDPKSRRSRGFGFITYSKASMVDDA 85
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
+ + + G QVE K+A P+
Sbjct: 86 MNNRPHI-IDGRQVEPKRAVPR 106
>gi|18419943|ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
gi|23308345|gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 5/154 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFG+VT+A ++ H + + +E+K PK + K +IF
Sbjct: 35 MKDRSTGRSRGFGYVTFASAEDAKNALKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIF 94
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IPSSV+E +F+ F ++G++ + + +D+++ + RG GFITF + +V+DL+ +
Sbjct: 95 VARIPSSVSESDFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLMEDTH- 153
Query: 121 LELAGAQVEVKKAEPKK---PNLPQPSYRRYNNP 151
+L G V V +A PK+ P P P R P
Sbjct: 154 -DLGGTTVAVDRATPKEDDHPPRPPPVARMSRPP 186
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+ V GIP ++ D KD+ +FGD+++ +M+D ST RSRGFG++TF + + + L
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL- 61
Query: 117 KGNKLELAGAQVEVKKAEPKKPNLPQPS 144
KG L +EVK A PK+ + QP+
Sbjct: 62 KGEHF-LGNRILEVKVATPKE-EMRQPA 87
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVG +P + D+ +D+F +FG +Q+ I +D S RGFGF+TF E V D +A+
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTF-AENGVADRVAR 299
Query: 118 GNKLELAGAQVEVKKAEP 135
+ E+ G +V + A P
Sbjct: 300 RSH-EICGQEVAIDSATP 316
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG 50
KD K RGFGFVT+A+ V D+V +H I G++V I P G
Sbjct: 273 KDPKRSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDEAG 321
>gi|402220502|gb|EJU00573.1| hypothetical protein DACRYDRAFT_53825 [Dacryopinax sp. DJM-731 SS1]
Length = 382
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
Query: 7 GQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPS 66
G+ RGF F+T+ +P+ V+ V+ H ++GK ++ KR IP+ + KT+K+F+GG+
Sbjct: 36 GRSRGFAFLTFREPAAVNAVMVREHHLDGKIIDPKRAIPR----LEHQKTQKLFIGGLAP 91
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 126
SV + +DFF QFG V + +M D + RS+GFGF+TF+ Q + L+ +G L + G
Sbjct: 92 SVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGFGFVTFEDGQGAEKLVGQG-ILSIDGK 150
Query: 127 QVEVKKAEPK 136
+EVK A+P+
Sbjct: 151 PIEVKIAQPR 160
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + +F QFG+V IMRD + RSRGF F+TF AV+ ++ +
Sbjct: 1 MFVGGLNWDTTDESLRRYFEQFGEVDACTIMRD-AGGRSRGFAFLTFREPAAVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 60 HHLD--GKIIDPKRAIPR 75
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAV 49
M DR++G+ +GFGFVT+ D +K++ + I+GK +E+K P+GA+
Sbjct: 114 MVDRESGRSKGFGFVTFEDGQGAEKLVGQGILSIDGKPIEVKIAQPRGAI 163
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 85/138 (61%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ K+ K G KIFV
Sbjct: 137 DPNTGRSRGFAFIVYKSADSIDKVVAVSEHVINNKKVDPKKA--KARYG-------KIFV 187
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ S ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 188 GGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 246
Query: 122 ELAGAQVEVKKAEPKKPN 139
++G +V+VKKA PK N
Sbjct: 247 TISGKEVDVKKATPKPEN 264
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
++ + KK +PKK
Sbjct: 163 ------VSEHVINNKKVDPKK 177
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 2649 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 2708
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 2709 KLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 2768
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ +L G V+VKKA PK+
Sbjct: 2769 -KQHQLNGKMVDVKKALPKQ 2787
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 2617 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQ 2675
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 2676 KSRPHKIDGRVVEPKRAVPRQ 2696
>gi|405123948|gb|AFR98711.1| heterogeneous nuclear ribonucleoprotein HRP1 [Cryptococcus
neoformans var. grubii H99]
Length = 474
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 6/127 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D +G+ RGF F+TY DP+ V KV+ TH ++GKQ++ KR IP+ ++ +T K+F
Sbjct: 144 MRD-PSGRSRGFAFLTYRDPASVTKVMAQTHHLDGKQIDPKRAIPR----AEHERTAKVF 198
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV + K F QFG V + +M D T RS+GF F TF E++V +A +
Sbjct: 199 VGGLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRAMA-ASG 257
Query: 121 LELAGAQ 127
+EL G Q
Sbjct: 258 VELEGKQ 264
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ E ++ QFG++ IMRD S RSRGF F+T+ +V ++A+
Sbjct: 113 KMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPS-GRSRGFAFLTYRDPASVTKVMAQ 171
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G Q++ K+A P+
Sbjct: 172 THHLD--GKQIDPKRAIPR 188
>gi|125600879|gb|EAZ40455.1| hypothetical protein OsJ_24907 [Oryza sativa Japonica Group]
Length = 427
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 116/227 (51%), Gaps = 27/227 (11%)
Query: 37 QVEIKRTIPKG--AVGSKDF----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQ 84
+VE K+ +P+ ++ SK+ +T+KIFVGG+ S+V E EF+ +F QFG +
Sbjct: 31 EVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEVEFRRYFEQFGVIT 90
Query: 85 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPS 144
+ +M DH+T R RGFGFIT+D+E AVD L K N EL G VEVK+A PK+ + P P+
Sbjct: 91 DVVVMYDHNTQRPRGFGFITYDSEDAVDKALHK-NFHELNGKMVEVKRAVPKEQS-PGPA 148
Query: 145 YRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGY 204
R PA G + + GF G + GG G R G YG+ G G+
Sbjct: 149 AR-----SPAGGQNYAMSRVHSFLNGFNQ---GYNPNPIGGYGMRVDGRYGLLTGARNGF 200
Query: 205 GVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGYDVTGDYGG 251
G GYG GM + G ++ G + + + G + Y G
Sbjct: 201 SSFGP-----GYGMGMNSESGMNANFGANSSFVNNSNGRQIGSFYNG 242
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPK 46
M D T +PRGFGF+TY VDK + ++ H +NGK VE+KR +PK
Sbjct: 95 MYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPK 141
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 26/157 (16%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI--EDTHIINGKQVEIKRTIPK------GAVGSK 52
M+D+ TG+PRGFG ++ I ++++ +V++KR + + G G+
Sbjct: 38 MRDKLTGRPRGFGIRK-------NRCIYFLLRYVLDLGKVDVKRAMSREEQQVSGRTGNL 90
Query: 53 DF----------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
+ KTKKIFVGG+P ++ ++EF+ +F +G V + IM D +T+R RGFGF
Sbjct: 91 NTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGF 150
Query: 103 ITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 139
++FD+E AVD +L K +L+G QVEVK+A PK N
Sbjct: 151 VSFDSEDAVDSVLHKTFH-DLSGKQVEVKRALPKDAN 186
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGF 102
K+FVGGI +ED+ ++ F +G+V + +MRD T R RGFG
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGI 51
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +D+V + HIIN K+V+ PK A + KIFV
Sbjct: 93 DPQTGRSRGFAFIVFTNTEAIDQVSAAEEHIINSKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG + E ++ D S +GF FITFD+EQ V DLL K K
Sbjct: 144 GGLTTEISDEEIKTYFSQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQ 202
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 203 KIAGKEVDVKRATPKPEN 220
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A+D + A
Sbjct: 59 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 119 AEEHI------INSKKVDPKK 133
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 70 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 120
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 121 GGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 179
Query: 122 ELAGAQVEVKKAEPKKPNL 140
++G +V+VKKA PK N+
Sbjct: 180 TISGKEVDVKKATPKPDNM 198
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 96 AGDHV------INNKKVDPKK 110
>gi|168067843|ref|XP_001785814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662538|gb|EDQ49378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFG+VT+A K + H +NG+ +E+K PK + K ++F
Sbjct: 29 MKDRGTGRSRGFGYVTFAAVEDAKKAVSTQHSLNGRMLEVKVATPKEEMKPPAKKITRVF 88
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IP SV ++ F+ +F ++G + + + +D + RG GF+TF+ ++VD+L+ + +
Sbjct: 89 VARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSKAHRGIGFVTFENPESVDNLMNETH- 147
Query: 121 LELAGAQVEVKKAEPKK 137
EL G+ + V +A PK+
Sbjct: 148 -ELGGSTIAVDRATPKE 163
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVG +P N ++ + +F FG + + + +D + RGFGF+TF E A + + +
Sbjct: 232 KIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALR 291
Query: 118 GNKLELAGAQVEVKKAEPK--KPNLP 141
+ E+ G Q+ V +A P+ N+P
Sbjct: 292 NH--EILGHQIAVDRAAPQDETANVP 315
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL-LAKGN 119
V GIP ++ + + + ++FG++ + +M+D T RSRGFG++TF AV+D A
Sbjct: 1 VLGIPWDIDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTF---AAVEDAKKAVST 57
Query: 120 KLELAGAQVEVKKAEPKKPNLP 141
+ L G +EVK A PK+ P
Sbjct: 58 QHSLNGRMLEVKVATPKEEMKP 79
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK 46
KD K RGFGFVT++D ++V H I G Q+ + R P+
Sbjct: 264 KDAKKTSHRGFGFVTFSDEGAAERVALRNHEILGHQIAVDRAAPQ 308
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD T + RGFGF+TY+ S+VD + + H I+G++VE KR +P+ + D + K
Sbjct: 50 MKDPVTKRSRGFGFITYSKASMVDDAMANRPHKIDGREVETKRAVPRDDIDKPDIAWTVK 109
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FV GI ED K++F Q+G++ QI+ D T + +GFGFI FD +VD +L
Sbjct: 110 KMFVSGIKEQAEED-LKEYFGQYGNILNIQIIADKETGQRKGFGFIEFDDSDSVDKAVLI 168
Query: 117 KGNKLELAGAQVEVKKAEPK 136
K + E++G+++EVKKA K
Sbjct: 169 KTH--EVSGSKLEVKKAVSK 186
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ + D K+FF ++GD+ + +M+D T RSRGFGFIT+ VDD +A
Sbjct: 18 RKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMVDDAMA 77
Query: 117 KGNKLELAGAQVEVKKAEPK----KPNL 140
++ G +VE K+A P+ KP++
Sbjct: 78 -NRPHKIDGREVETKRAVPRDDIDKPDI 104
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 8/144 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D+ T RGFGFV YAD V +V+++ H ++ K+++ K PK K
Sbjct: 40 MRDKLTQMSRGFGFVKYADAGAVAEVLKNRPHTLDNKKIDPKPCTPKTIQQQKKNAQIEH 99
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+T KIF+GG+ + E+E K +F Q+G V E + + +R +GFGF+TF++E AVD
Sbjct: 100 TQTHKIFIGGLAQNATEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQ 159
Query: 114 LLAKGNKLELAGAQVEVKKAEPKK 137
+ K + E+ G +VE K+A P++
Sbjct: 160 AVGK-HFHEICGKRVEAKRATPRE 182
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ +D + F +G++ E +MRD T SRGFGF+ + AV ++L K
Sbjct: 9 KIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVL-K 67
Query: 118 GNKLELAGAQVEVKKAEPK 136
L +++ K PK
Sbjct: 68 NRPHTLDNKKIDPKPCTPK 86
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 100/195 (51%), Gaps = 22/195 (11%)
Query: 5 KTGQ-PRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIF 60
KT Q R FGFVTY P + + + H + G VE+KR +PK + K KKIF
Sbjct: 41 KTAQRSRCFGFVTYLTPEEANAAMAASPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIF 100
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + + ED+ D+F Q+G+V+ +IM + +T + RGFGF+ F + A D +A
Sbjct: 101 VGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFH 160
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGG-FAGGGFGGS 179
+ G +VEVKKA PK + G D GYGGG + G+ G
Sbjct: 161 T-VNGHRVEVKKAVPK---------------QEMQAGGCSDQQNGYGGGNSYQQNGYRGR 204
Query: 180 GG-GGGGGGYRSSGA 193
G G G G +SSG+
Sbjct: 205 TGYKGRGHGQQSSGS 219
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ N+D + F QFG + + ++ + RSR FGF+T+ T + + +A
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDFAVVPHKTAQRSRCFGFVTYLTPEEANAAMA- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G VEVK+A PKK
Sbjct: 66 ASPHTVEGNWVEVKRAVPKK 85
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS 51
M ++ TG+ RGFGFV + D D + H +NG +VE+K+ +PK + +
Sbjct: 129 MSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKAVPKQEMQA 180
>gi|167999759|ref|XP_001752584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696115|gb|EDQ82455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFG+VT+A K + H +NG+ +E+K PK + K ++F
Sbjct: 31 MKDRGTGRSRGFGYVTFATVEDAKKTVSTQHSLNGRMLEVKVATPKEEMKPPAKKITRVF 90
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IP SV ++ F+ +F ++G + + + +D + RG GF+TF+ ++VD L+ + +
Sbjct: 91 VARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSKAHRGIGFVTFEIPESVDRLMNETH- 149
Query: 121 LELAGAQVEVKKAEPKK 137
EL G+ + V +A PK+
Sbjct: 150 -ELGGSTIAVDRATPKE 165
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVG +P N ++ + +F FG + + + +D + RGFGF+TF E A + + +
Sbjct: 237 KIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALR 296
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ E+ G Q+ V +A P+
Sbjct: 297 NH--EILGHQIAVDRAAPQ 313
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V GIP V+ + + + ++FG++ + +M+D T RSRGFG++TF T + ++ +
Sbjct: 3 VLGIPWDVDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFATVEDAKKTVSTQHS 62
Query: 121 LELAGAQVEVKKAEPKKPNLP 141
L G +EVK A PK+ P
Sbjct: 63 LN--GRMLEVKVATPKEEMKP 81
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGS 51
KD K RGFGFVT++D ++V H I G Q+ + R P+ V +
Sbjct: 269 KDAKKTSHRGFGFVTFSDEGAAERVALRNHEILGHQIAVDRAAPQDEVAN 318
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 89/139 (64%), Gaps = 13/139 (9%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV--IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
D +TG+ RGF F+ + + ++KV +E+ HIIN K+V+ PK A + KIF
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIEKVSAVEE-HIINSKKVD-----PKKAKA----RHGKIF 139
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 140 VGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPK 198
Query: 121 LELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 199 QKIAGKEVDVKRATPKPEN 217
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A++ + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 116 VEEHI------INSKKVDPKK 130
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 70 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 120
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 121 GGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 179
Query: 122 ELAGAQVEVKKAEPKKPNL 140
++G +V+VKKA PK N+
Sbjct: 180 TISGKEVDVKKATPKPDNM 198
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 96 AGDHV------INNKKVDPKK 110
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV HIIN K+V+ PK A + KIFV
Sbjct: 89 DPQTGRSRGFAFIVFTNTEAIDKVSSAGEHIINSKKVD-----PKKAKA----RHGKIFV 139
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 140 GGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 198
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 199 KISGKEVDVKRATPKPEN 216
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
AV ++ +K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F
Sbjct: 45 SAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFT 104
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A+D + + G + + KK +PKK
Sbjct: 105 NTEAIDKVSSAGEHI------INSKKVDPKK 129
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV HIIN K+V+ PK A + KIFV
Sbjct: 89 DPQTGRSRGFAFIVFTNTEAIDKVSSAGEHIINSKKVD-----PKKAKA----RHGKIFV 139
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 140 GGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 198
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 199 KISGKEVDVKRATPKPEN 216
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
AV ++ +K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F
Sbjct: 45 SAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFT 104
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A+D + + G + + KK +PKK
Sbjct: 105 NTEAIDKVSSAGEHI------INSKKVDPKK 129
>gi|403418256|emb|CCM04956.1| predicted protein [Fibroporia radiculosa]
Length = 336
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ H ++GK ++ KR IP+ + + K+F
Sbjct: 44 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHFLDGKIIDPKRAIPR----QEHQRATKLF 98
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+ SV + +DFF QFG V + +M D T RS+GFGF++F+ V+ LL GN
Sbjct: 99 IGGLAGSVTSESMRDFFSQFGKVVDATVMLDRETGRSKGFGFVSFENVN-VEPLLGFGN- 156
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G ++VK A+P+
Sbjct: 157 LEIDGKLIDVKLAQPR 172
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQ--FGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
K+F+GG+ + + + FG V+ IMRD + RSR F F+TF+ +V+ ++
Sbjct: 11 KMFIGGLNWDTTDGAYAFLAISRGFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVM 69
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
+ + L+ G ++ K+A P++
Sbjct: 70 VREHFLD--GKIIDPKRAIPRQ 89
>gi|289739923|gb|ADD18709.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 295
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + P+ ++KV E H+IN K+V+ PK A + KIFV
Sbjct: 83 DSQTGRSRGFAFIVFTGPTAIEKVNEHGEHVINNKKVD-----PKKAKA----RHGKIFV 133
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++DE K +F QFG++ E ++ D S+ + F FITFD+EQ V +LL K K
Sbjct: 134 GGLTNEISDDEIKTYFGQFGNIVEVEMPFDKQKSQRKAFCFITFDSEQVVSELL-KTPKQ 192
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 193 KISGKEVDVKRATPKPDN 210
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ +E E ++ F +FG+++ + D T RSRGF FI F A++ +
Sbjct: 49 RKLFVGGLSWETSEKELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIEKVNE 108
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G + + KK +PKK
Sbjct: 109 HGEHV------INNKKVDPKK 123
>gi|169865640|ref|XP_001839418.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
gi|116499426|gb|EAU82321.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
Length = 495
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ HI++GK ++ KR IP+ + + K+F
Sbjct: 168 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHILDGKIIDPKRAIPR----QEHQRATKLF 222
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+P SV + ++FF QFG V + +M D T RS+GFGFI+F+ + V L GN
Sbjct: 223 IGGLPGSVTSESMREFFSQFGKVIDSTVMLDRETGRSKGFGFISFE-DTDVRPFLGFGN- 280
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G ++VK A+P+
Sbjct: 281 LEIDGKLIDVKLAQPR 296
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 8 QPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKG--AVGSKDFKTK-KIFVGG 63
QP+ TY +P V + D+ +N IP G V + K + K+F+GG
Sbjct: 91 QPQLQQIPTYEEPQPVQSISRPDSGALNK--------IPSGERTVRPSEMKDEGKMFIGG 142
Query: 64 IPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 123
+ ++ +D+F QFG V IMRD + RSR F F+TF+ +V+ ++ + + L+
Sbjct: 143 LNWDTTDEGLRDYFSQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVREHILD- 200
Query: 124 AGAQVEVKKAEPKK 137
G ++ K+A P++
Sbjct: 201 -GKIIDPKRAIPRQ 213
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 26/242 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSK-DFKTKK 58
MKD ++ + RGFGFVT+ + S VDK D H ++GK V+ KR +P+ + KK
Sbjct: 45 MKDPRSNKSRGFGFVTFKEASSVDKAQADRPHKVDGKDVDSKRAMPREETSPEVHAAVKK 104
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAK 117
IFVGG+ V ++ ++F +FG+V + I+ T+ SRGF F+TFD +VD +LA+
Sbjct: 105 IFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILAR 164
Query: 118 -----GNKLEL--AGAQVEVKKAEPKKPNLPQPSYRRYN---NPKPAYGSGFGDAYGGYG 167
G+K ++ A ++ E++K + K P P+ YN N P G GY
Sbjct: 165 PHMIGGHKADVRKALSREELRKVQTKPP----PARMDYNSSWNEGPNMGYQQPSWDQGYN 220
Query: 168 GGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEP 227
+ G G GGY +SGA+ G+G Y + YGG G R P
Sbjct: 221 QSYGGQQQQYYNNSGYGYGGYDNSGAWPPVADGFGNY----QQQAYGG-----GPMRATP 271
Query: 228 SS 229
+S
Sbjct: 272 AS 273
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ KK+FVGG+ NED + ++ Q+G++ + +M+D +++SRGFGF+TF +VD
Sbjct: 11 QDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKA 70
Query: 115 LA-KGNKLELAGAQVEVKKAEPKKPNLPQ 142
A + +K++ G V+ K+A P++ P+
Sbjct: 71 QADRPHKVD--GKDVDSKRAMPREETSPE 97
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 70 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 120
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 121 GGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 179
Query: 122 ELAGAQVEVKKAEPKKPNL 140
++G +V+VKKA PK N+
Sbjct: 180 TISGKEVDVKKATPKPDNM 198
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 96 AGDHV------INNKKVDPKK 110
>gi|395327650|gb|EJF60048.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 333
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ H ++GK ++ KR IP+ + + K+F
Sbjct: 31 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHFLDGKIIDPKRAIPR----QEHQRATKLF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+P SV + +++F QFG V + +M D T RS+GFGF++F+ V+ +L GN
Sbjct: 86 IGGLPGSVTSESMREYFTQFGKVVDATVMLDRETGRSKGFGFVSFENVN-VEPMLGFGN- 143
Query: 121 LELAGAQVEVKKAEPK 136
L++ G ++VK A+P+
Sbjct: 144 LQIDGKLIDVKLAQPR 159
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ K +F QFG V+ IMRD + RSR F F+TF+ +V+ ++ +
Sbjct: 1 MFIGGLNWDTTDEALKKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 60 HFLD--GKIIDPKRAIPRQ 76
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + +DKV + HIIN K+V+ PK A + KIFV
Sbjct: 91 DPQTGRSRGFAFIVFTTTEAIDKVSAAEEHIINSKKVD-----PKKAKA----RHGKIFV 141
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + + ++E K +F QFG++ E ++ D S+ +GF FITFD EQ V DLL K K
Sbjct: 142 GGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLL-KTPKQ 200
Query: 122 ELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 201 KIAGKEVDVKRATPKPEN 218
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
GA G +D +K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F
Sbjct: 48 GASGQRD-DDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFT 106
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
T +A+D + A + + KK +PKK
Sbjct: 107 TTEAIDKVSAAEEHI------INSKKVDPKK 131
>gi|401411141|ref|XP_003885018.1| hypothetical protein NCLIV_054170 [Neospora caninum Liverpool]
gi|325119437|emb|CBZ54990.1| hypothetical protein NCLIV_054170 [Neospora caninum Liverpool]
Length = 460
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 92/149 (61%), Gaps = 12/149 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSK---DFKT 56
M D+ TG RGFGFV +AD + V + + H+I+G++V+++ +PKG V SK D +
Sbjct: 125 MVDKVTGNSRGFGFVIFADAAAVADCVGAEKHVIDGQEVDVRHAVPKGQVVSKNGEDDQQ 184
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQ-FGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
K+FVGGIP S++E+ F + FG V++ +M D +T R RGFGF+TF + + +
Sbjct: 185 NKVFVGGIPESLSEERIAAFLSERFGSVKKVSLMHDKNTGRCRGFGFVTFQFPHSAQNCV 244
Query: 116 AKGNKLELAGAQVEVKKAEPK----KPNL 140
K + + G +EVKKAEP+ KP++
Sbjct: 245 GKHD---IDGHLIEVKKAEPRYATTKPHM 270
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ KIF+G + + + QFG +++ +M D T SRGFGF+ F AV D
Sbjct: 91 EENKIFIGNLNQQTTTESLTAYMKQFGTIEDSVVMVDKVTGNSRGFGFVIFADAAAVADC 150
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
+ K + G +V+V+ A PK
Sbjct: 151 VG-AEKHVIDGQEVDVRHAVPK 171
>gi|401401445|ref|XP_003881013.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
gi|325115425|emb|CBZ50980.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
Length = 434
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-----DFKTK 57
D+ TG+ RGFGF+T+ P V +V + H ++G QVE++R IP+ D
Sbjct: 155 DKFTGRSRGFGFITFTTPEPVSRVADMRHTVDGTQVEVRRAIPREEAREHGGSGADRDAG 214
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++FVGGI VN++ + +F +G++Q +M D +R RGFGF+ F + +
Sbjct: 215 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGP 274
Query: 118 GNKLELAGAQVEVKKAEPKKPN 139
KL G E K+A+P++ N
Sbjct: 275 HKKL---GVHCEAKRAQPRQMN 293
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 52 KDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 111
K+ + +K+FVGG+ S D + +F Q+GDV + +++ D T RSRGFGFITF T + V
Sbjct: 116 KEVQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPEPV 175
Query: 112 DDLLAKGNKLELAGAQVEVKKAEPKK 137
+ + ++ G QVEV++A P++
Sbjct: 176 SRVADMRHTVD--GTQVEVRRAIPRE 199
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +D+V + HIIN K+V+ PK A + KIFV
Sbjct: 91 DPQTGRSRGFAFIVFTNTEAIDQVSAAEEHIINSKKVD-----PKKAKA----RHGKIFV 141
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S +GF FITFD+EQ V DLL K K
Sbjct: 142 GGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQ 200
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 201 KISGKEVDVKRATPKPEN 218
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F +A+D + A
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 116
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + KK +PKK
Sbjct: 117 AEEHI------INSKKVDPKK 131
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 5 KTGQ-PRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIF 60
KT Q R FGFVTY P + + + H + G VE+KR +PK + K KKIF
Sbjct: 41 KTAQRSRCFGFVTYLTPEEANAAMAASPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIF 100
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + + ED+ D+F QFG+V+ +IM + T + RGFGF+ F A D +A
Sbjct: 101 VGGLKNDIQEDDLTDYFSQFGEVENSEIMSEKETGKKRGFGFVHFTDHYAADMAVAVPFH 160
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRR 147
+ G +VEVKKA PK+ + PS R
Sbjct: 161 T-VNGHRVEVKKAVPKQ-EMQAPSRIR 185
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ N+D + F QFG + + ++ + RSR FGF+T+ T + + +A
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMA- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G VEVK+A PKK
Sbjct: 66 ASPHTVEGNWVEVKRAVPKK 85
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS 51
M +++TG+ RGFGFV + D D + H +NG +VE+K+ +PK + +
Sbjct: 129 MSEKETGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKAVPKQEMQA 180
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 15/140 (10%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTK--KI 59
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A K + KI
Sbjct: 137 DPNTGRSRGFAFIVYKSADSIDKVVAVSEHVINNKKVD-----PKKA------KARYGKI 185
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ S ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K
Sbjct: 186 FVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTP 244
Query: 120 KLELAGAQVEVKKAEPKKPN 139
K ++G +V+VKKA PK N
Sbjct: 245 KQTISGKEVDVKKATPKPEN 264
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 162
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
++ + KK +PKK
Sbjct: 163 ------VSEHVINNKKVDPKK 177
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDF------ 54
M+D TG+ RGF F+ + DP V+ V+ H ++GK ++ KR IP+ +
Sbjct: 201 MRDNMTGRSRGFAFLNFVDPKAVNTVMVREHYLDGKVIDPKRAIPRPQHNQQGGGHHNNY 260
Query: 55 ---------------KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
++K+FVGG+P SV F+ FF QFG + + M D T + RG
Sbjct: 261 NNGGGGGGGGGSYSASSQKLFVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRG 320
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP----SYRRYNNPKPAY 155
FGF+T+ + +++ +L + G +V+VK+A+ K N PQ +R +NP+ AY
Sbjct: 321 FGFLTYADDSSLNHVL-NTRPIVFDGKEVDVKRAQSK--NDPQSLQIRRQQRMDNPEMAY 377
Query: 156 G 156
G
Sbjct: 378 G 378
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ED + +F QFG+V IMRD+ T RSRGF F+ F +AV+ ++ +
Sbjct: 170 KMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVNTVMVR 229
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 230 EHYLD--GKVIDPKRAIPR 246
>gi|432877061|ref|XP_004073087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 5 KTGQ-PRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIF 60
KT Q R FGFVTY P D + + H + G VE+KR +PK + K KKIF
Sbjct: 41 KTAQRSRCFGFVTYLTPEEADAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIF 100
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + + ED+ D+F Q+G+V+ +IM + T + RGFGF+ F A D +A
Sbjct: 101 VGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKDTGKKRGFGFVHFTDHYAADMAVAVPFH 160
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRR 147
+ G +VEVKK+ PK+ + PS R
Sbjct: 161 T-VNGHRVEVKKSVPKQ-EMQAPSRIR 185
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ N+D + F QFG + + ++ + RSR FGF+T+ T + D +A
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMA- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G VEVK+A PKK
Sbjct: 66 ASPHTVEGNWVEVKRAVPKK 85
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAV 49
M ++ TG+ RGFGFV + D D + H +NG +VE+K+++PK +
Sbjct: 129 MSEKDTGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKSVPKQEM 178
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 87/138 (63%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +DKV + H+INGK+V+ PK A + KIFV
Sbjct: 100 DPQTGRSRGFAFIVFTNTEAIDKVSSAEEHVINGKKVD-----PKKAKA----RHGKIFV 150
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E + +F QFG + E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 151 GGLTTEISDEEIRTYFSQFGTIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQ 209
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 210 KISGKEVDVKRATPKPEN 227
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F +FGD+ + D T RSRGF FI F +A+D + +
Sbjct: 66 RKLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSS 125
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + G +V+ KKA+ +
Sbjct: 126 AEEHV-INGKKVDPKKAKAR 144
>gi|326506828|dbj|BAJ91455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+TKKIFVGG+PSS+ ++EF+ +F FG V + +M D +T R RGFGFITFD+E AVD +
Sbjct: 14 RTKKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRV 73
Query: 115 LAKGNKLELAGAQVEVKKAEPKKPN 139
L K +L G VEVK+A P++ N
Sbjct: 74 LHK-TFHDLGGKMVEVKRALPREAN 97
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D+ T +PRGFGF+T+ VD+V+ T H + GK VE+KR +P+ A
Sbjct: 48 MYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALPREA 96
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 74 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 124
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++DE K FF QFG++ + ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 125 GGLTTEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 183
Query: 122 ELAGAQVEVKKAEPKKPN 139
++G +V+VKKA PK N
Sbjct: 184 TISGKEVDVKKATPKPDN 201
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A
Sbjct: 40 RKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 99
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 100 AGDHV------INNKKVDPKK 114
>gi|348511819|ref|XP_003443441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 317
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+ +++ G+ R FGF+TY+ P D + H++ G VE+KR I + + D K
Sbjct: 65 VMNQQLGRSRCFGFITYSTPEEADAAMAAKPHVVEGNNVEVKRAIAREDANNPDILANVK 124
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLA 116
KIFVGG+ + E+ ++F QFG V++ +I+ D T R RGFGF+ F DT+ A +L
Sbjct: 125 KIFVGGVKDHIVEENLTEYFSQFGAVEKAEIISDKQTGRKRGFGFVFFEDTDSATKAVLT 184
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K + + G +VEVKKA K+
Sbjct: 185 KYHTIN--GNKVEVKKALTKQ 203
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
K K+FVGG+ ++ + +F Q+G + + ++ + RSR FGFIT+ T + D
Sbjct: 31 KLCKLFVGGLNVETTDEGLRKYFEQYGTLSDCVVVMNQQLGRSRCFGFITYSTPEEADAA 90
Query: 115 LAKGNKLELAGAQVEVKKA 133
+A + + G VEVK+A
Sbjct: 91 MAAKPHV-VEGNNVEVKRA 108
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSK-DFKTKK 58
MKD ++ + RGFGFVTY D S VD + H ++GK+V+ KR +P+ + KK
Sbjct: 46 MKDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKK 105
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAK 117
IFVG + V ++ D+F QFG V + QI+ T+ SRGF F+TFD AVD +LA+
Sbjct: 106 IFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILAR 165
Query: 118 GNKLELAGAQVEVKKA 133
+ ++ + A +V+KA
Sbjct: 166 PHTIKDSKA--DVRKA 179
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 51 SKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 110
SK + KK+F+GG+ +E+ KD++ Q+G++ + +M+D + +SRGFGF+T+ +
Sbjct: 8 SKADQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASS 67
Query: 111 VDDLLAKGNKLE-LAGAQVEVKKAEPKKPNLPQ 142
VD A+ N+ + G +V+ K+A P++ P+
Sbjct: 68 VD--AAQNNRPHTVDGKEVDTKRAMPREETSPE 98
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 70 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 120
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 121 GGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 179
Query: 122 ELAGAQVEVKKAEPKKPNL 140
++G +V+VKKA PK N+
Sbjct: 180 TISGKEVDVKKATPKPDNM 198
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 96 AGDHV------INNKKVDPKK 110
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 86/139 (61%), Gaps = 11/139 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 70 DPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVD-----PKKAKA----RHGKIFV 120
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K
Sbjct: 121 GGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQ 179
Query: 122 ELAGAQVEVKKAEPKKPNL 140
++G +V+VKKA PK N+
Sbjct: 180 TISGKEVDVKKATPKPDNM 198
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA 95
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 96 AGDHV------INNKKVDPKK 110
>gi|409049501|gb|EKM58978.1| hypothetical protein PHACADRAFT_249120 [Phanerochaete carnosa
HHB-10118-sp]
Length = 338
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ H ++GK ++ KR IP+ + + K+F
Sbjct: 31 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHFLDGKIIDPKRAIPR----QEHQRATKLF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+ SV + ++FF QFG V + +M D T RS+GFGF++F+ V+ LL GN
Sbjct: 86 IGGLAGSVTSESMREFFSQFGKVVDATVMLDRETGRSKGFGFVSFENAN-VEPLLGFGN- 143
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G ++VK A+P+
Sbjct: 144 LEIDGKIIDVKLAQPR 159
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + +F QFG V+ IMRD + RSR F F+TF+ +V+ ++ +
Sbjct: 1 MFIGGLNWDTTDESLRKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 60 HFLD--GKIIDPKRAIPRQ 76
>gi|312373340|gb|EFR21099.1| hypothetical protein AND_17568 [Anopheles darlingi]
Length = 808
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ HIIN K+V+ PK A + KIFV
Sbjct: 87 DPVTGRSRGFAFIVYKQAESIDKVVAAGDHIINNKKVD-----PKKAKA----RHGKIFV 137
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++DE K FF QFG + E ++ D ++ +GF FIT+D+ Q V++LL K K
Sbjct: 138 GGLTTEISDDEIKTFFGQFGTIVEVEMPFDKQKNQRKGFCFITYDSVQVVNELL-KTPKQ 196
Query: 122 ELAGAQVEVKKAEPKKPN 139
+ G +V+VKKA PK N
Sbjct: 197 TICGKEVDVKKATPKPDN 214
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E K+ F +GD++ + D T RSRGF FI + +++D ++A
Sbjct: 53 RKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDKVVA 112
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 113 AGDHI------INNKKVDPKK 127
>gi|432877067|ref|XP_004073090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 282
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 6/147 (4%)
Query: 5 KTGQ-PRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIF 60
KT Q R FGFVTY P D + + H + G VE+KR +PK + K KKIF
Sbjct: 41 KTAQRSRCFGFVTYLTPEEADAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIF 100
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ + + ED+ D+F Q+G+V+ +IM + +T + RGFGF+ F + A D +A
Sbjct: 101 VGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFH 160
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRR 147
+ G +VEVKK+ PK+ + PS R
Sbjct: 161 T-VNGHRVEVKKSVPKQ-EMQAPSRIR 185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ N+D + F QFG + + ++ + RSR FGF+T+ T + D +A
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMA- 65
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G VEVK+A PKK
Sbjct: 66 ASPHTVEGNWVEVKRAVPKK 85
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS 51
M ++ TG+ RGFGFV + D D + H +NG +VE+K+++PK + +
Sbjct: 129 MSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKSVPKQEMQA 180
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 13/139 (9%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV--IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
D +TG+ RGF F+ + + ++KV +E+ HIIN K+V+ +PK + KIF
Sbjct: 90 DPQTGRSRGFAFIVFTNTEAIEKVSAVEE-HIINSKKVD----LPKAKA-----RHGKIF 139
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VG + + ++++E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K
Sbjct: 140 VGFLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPK 198
Query: 121 LELAGAQVEVKKAEPKKPN 139
++AG +V+VK+A PK N
Sbjct: 199 QKIAGKEVDVKRATPKPEN 217
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E E +D F ++G+++ + D T RSRGF FI F +A++ + A
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 117 KGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
VE KK +LP+ R
Sbjct: 116 -----------VEEHIINSKKVDLPKAKAR 134
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 58 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 117
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 118 KLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ +L G V+VKKA PK+ ++
Sbjct: 178 K-QHQLKGKMVDVKKALPKQSDV 199
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 25 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 83
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 QKSRPHKIDGRVVEPKRAVPRQ 105
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ + P +DKV+ H IN K+V+ PK A + KIFV
Sbjct: 76 DPNTGRSRGFAFIVFKAPDSIDKVMAAGDHTINNKKVD-----PKKAKA----RHGKIFV 126
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ S +++DE K+FF FG++ E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 127 GGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 185
Query: 122 ELAGAQVEVKKAEPK 136
+AG +V+VK+A PK
Sbjct: 186 TIAGKEVDVKRATPK 200
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +G+++ + D +T RSRGF FI F ++D ++A
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 101
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + KK +PKK
Sbjct: 102 AGDHT------INNKKVDPKK 116
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 11/138 (7%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + + +++V + HIIN K+V+ PK A + KIFV
Sbjct: 91 DPQTGRSRGFAFIVFTNTEAIEQVSAAEEHIINSKKVD-----PKKAKA----RHGKIFV 141
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + ++++E K +F QFG++ E ++ D S +GF FITFD+EQ V DLL K K
Sbjct: 142 GGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQ 200
Query: 122 ELAGAQVEVKKAEPKKPN 139
+++G +V+VK+A PK N
Sbjct: 201 KISGKEVDVKRATPKPEN 218
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
A G++ +K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F
Sbjct: 47 AAAGNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFT 106
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A++ + A + + KK +PKK
Sbjct: 107 NTEAIEQVSAAEEHI------INSKKVDPKK 131
>gi|324507426|gb|ADY43149.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 331
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + RGFGFVTY+ S V+ +E+ H+I+GK V++KR +P+ + +K
Sbjct: 53 MRDPTTKRSRGFGFVTYSKQSEVNAAMENRPHVIDGKTVDLKRAVPRDQSQRNEANVSSK 112
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++++ G+ E+ F D+F +G+V + +++ D +T + RGF F+TFD AVD +
Sbjct: 113 RLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVLI 172
Query: 118 GNKLELAGAQVEVKKAEPKK 137
N + + A+ +VKKA K+
Sbjct: 173 KNHM-INNARCDVKKALSKE 191
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ GA+ ++ F+ K+F+GG+ S+ ++ K+F+ +G++ + +MRD +T RSRGFGF+
Sbjct: 10 VSAGALEAEQFR--KMFIGGLTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFV 67
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 136
T+ + V+ + + + G V++K+A P+
Sbjct: 68 TYSKQSEVNAAMENRPHV-IDGKTVDLKRAVPR 99
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + T H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA PK+
Sbjct: 161 KIVIQKYHT-VKGHNCEVRKALPKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ K A + + +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+
Sbjct: 1 MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
T+ T + VD + ++ G VE K+A
Sbjct: 61 TYATVEEVDAAM-NTTPHKVDGRVVEPKRA 89
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + T H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA PK+
Sbjct: 161 KIVIQKYHT-VKGHNCEVRKALPKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ K A + + +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+
Sbjct: 1 MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
T+ T + VD + ++ G VE K+A
Sbjct: 61 TYATVEEVDAAM-NTTPHKVDGRVVEPKRA 89
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY+ +++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 58 MKDPRTKRSRGFGFITYSHSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 117
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG + + I+ D T + RGF F+ FD VD ++ +
Sbjct: 118 KLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ +L G V+VKKA PK+ +
Sbjct: 178 K-QHQLNGKMVDVKKALPKQNEM 199
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G + + +M+D T RSRGFGFIT+ +D+
Sbjct: 25 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDE-A 83
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 QKARPHKIDGRVVEPKRAVPRQ 105
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 11/132 (8%)
Query: 6 TGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGI 64
TG+ RGF F+ + P +DKV+ H IN K+V+ PK A + KIFVGG+
Sbjct: 80 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD-----PKKAKA----RHGKIFVGGL 130
Query: 65 PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 124
S +++DE ++FF +FG + E ++ D + ++ +GF FITF++EQ V+DLL K K +
Sbjct: 131 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIG 189
Query: 125 GAQVEVKKAEPK 136
G +V+VK+A PK
Sbjct: 190 GKEVDVKRATPK 201
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F + +++ + +T RSRGF FI F +++D ++A
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G + KK +PKK
Sbjct: 103 AGEHT------INNKKVDPKK 117
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 11/132 (8%)
Query: 6 TGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGI 64
TG+ RGF F+ + P +DKV+ H IN K+V+ PK A + KIFVGG+
Sbjct: 80 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD-----PKKAKA----RHGKIFVGGL 130
Query: 65 PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 124
S +++DE ++FF +FG + E ++ D + ++ +GF FITF++EQ V+DLL K K +
Sbjct: 131 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIG 189
Query: 125 GAQVEVKKAEPK 136
G +V+VK+A PK
Sbjct: 190 GKEVDVKRATPK 201
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F + +++ + +T RSRGF FI F +++D ++A
Sbjct: 43 RKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMA 102
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G + KK +PKK
Sbjct: 103 AGEHT------INNKKVDPKK 117
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S+VD+ + H I+G+ VE KR +P+ + S + K
Sbjct: 59 MKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 118
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F +G++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 119 KLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ +L G V+VKKA PK+ +
Sbjct: 179 K-QHQLNGKMVDVKKALPKQNEM 200
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G + + +M+D T RSRGFGFIT+ VD+
Sbjct: 26 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDE-A 84
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 85 QKARPHKIDGRVVEPKRAVPRQ 106
>gi|391332836|ref|XP_003740835.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Metaseiulus occidentalis]
Length = 396
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT--- 56
+ + G+ RGFGFVT+ DP VV V + H I+ + V+ K P+G G K
Sbjct: 40 VMTNEQGRSRGFGFVTFKDPQVVQVVCQGGPHRIDNRVVDPKPCNPRGGPGKGGGKRGRG 99
Query: 57 -KKIFVGGIPSSVNEDEFKDFFMQ-FGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
KIFVGG+P+S+ E+E K FF + +GDV E IM D +SRGFGF++F+ + AV D
Sbjct: 100 YPKIFVGGLPTSLTENELKMFFQEHYGDVFEVVIMYDQERRKSRGFGFVSFENDDAV-DR 158
Query: 115 LAKGNKLELAGAQVEVKKAEPK 136
+ + + + G QVE K+A+P+
Sbjct: 159 ACRDHYVSINGKQVECKRAQPR 180
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKGAVGSK 52
M D++ + RGFGFV++ + VD+ D ++ INGKQVE KR P+ + SK
Sbjct: 134 MYDQERRKSRGFGFVSFENDDAVDRACRDHYVSINGKQVECKRAQPRDVLESK 186
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
V KD +K +FVGG+ ++ + +F +FG++ + +M + RSRGFGF+TF
Sbjct: 2 VDDKDVLSK-MFVGGLSWDTTKEGLQSYFCRFGEIVDCVVMTNEQ-GRSRGFGFVTFKDP 59
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKA 133
Q V ++ +G + V+ K
Sbjct: 60 QVV-QVVCQGGPHRIDNRVVDPKPC 83
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-----DFKTK 57
D+ TG+ RGFGF+T+ P V +V + H ++G QVE++R IP+ D
Sbjct: 157 DKFTGRSRGFGFITFTTPDPVARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAG 216
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++FVGGI VN++ + +F +G++Q +M D +R RGFGF+ F + +
Sbjct: 217 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS 276
Query: 118 GNKLELAGAQVEVKKAEPKKPN 139
KL G E K+A+P++ N
Sbjct: 277 HKKL---GVHCEAKRAQPRQSN 295
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 41 KRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGF 100
+R+ P+ K+ + +K+FVGG+ S D + +F Q+GDV + +++ D T RSRGF
Sbjct: 109 QRSPPQEP--DKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGF 166
Query: 101 GFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
GFITF T V + + ++ G QVEV++A P++
Sbjct: 167 GFITFTTPDPVARVADMRHTVD--GTQVEVRRAIPRE 201
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSK-----DFKTK 57
D+ TG+ RGFGF+T+ P V +V + H ++G QVE++R IP+ D
Sbjct: 157 DKFTGRSRGFGFITFTTPDPVARVADMRHTVDGTQVEVRRAIPREEARDHGGPGADRDAG 216
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++FVGGI VN++ + +F +G++Q +M D +R RGFGF+ F + +
Sbjct: 217 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS 276
Query: 118 GNKLELAGAQVEVKKAEPKKPN 139
KL G E K+A+P++ N
Sbjct: 277 HKKL---GVHCEAKRAQPRQSN 295
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 41 KRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGF 100
+R+ P+ K+ + +K+FVGG+ S D + +F Q+GDV + +++ D T RSRGF
Sbjct: 109 QRSPPQEP--DKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGF 166
Query: 101 GFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
GFITF T V + + ++ G QVEV++A P++
Sbjct: 167 GFITFTTPDPVARVADMRHTVD--GTQVEVRRAIPRE 201
>gi|403415424|emb|CCM02124.1| predicted protein [Fibroporia radiculosa]
Length = 532
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 7 GQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPS 66
G+ RGF F+T+ DPS V+ V+ HI++GK ++ KR IP+ + + + FVGG+
Sbjct: 158 GRSRGFAFLTFEDPSSVNAVMVREHILDGKAIDPKRAIPR----EEHLRNTRYFVGGLSH 213
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 126
+ D + FF +G V + +M D + RS+GFGF+TF+ D L+ +G+ L L
Sbjct: 214 ATTSDSMRAFFSAYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQLVGRGD-LILDDK 272
Query: 127 QVEVKKAEPK 136
+EVK A+P+
Sbjct: 273 MIEVKVAQPR 282
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + +F +FG V++ I+RDH RSRGF F+TF+ +V+ ++ +
Sbjct: 122 KLFVGGLSWDTTDEGLRKYFSEFGKVEDCTILRDHD-GRSRGFAFLTFEDPSSVNAVMVR 180
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ L+ G ++ K+A P++ +L
Sbjct: 181 EHILD--GKAIDPKRAIPREEHL 201
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKG 47
M DR++G+ +GFGFVT+ D S D+++ I++ K +E+K P+
Sbjct: 236 MVDRESGRSKGFGFVTFEDASNTDQLVGRGDLILDDKMIEVKVAQPRS 283
>gi|170030552|ref|XP_001843152.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167867828|gb|EDS31211.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 371
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ P +VD+ + H I+G+ VE KR +P+ + + K
Sbjct: 56 MKDPKTKRSRGFGFITYSKPYMVDEAQQKRPHKIDGRVVEPKRAVPRQDINRPEAGASVK 115
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +D+F +FG+V I+ + + + RGFGF+ FD VD ++ +
Sbjct: 116 KLFVGGLRDDFDEEHLRDYFGKFGNVISACIVTEKESGKKRGFGFVEFDDYDPVDKIILQ 175
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + ++VKKA PK+
Sbjct: 176 KSHT-IQNKMLDVKKALPKQ 194
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K +F ++G V + +M+D T RSRGFGFIT+ VD+
Sbjct: 24 RKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKPYMVDEAQQ 83
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 K-RPHKIDGRVVEPKRAVPRQ 103
>gi|122720941|gb|ABM66456.1| RNA-binding protein [Brassica juncea]
Length = 179
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
MKDR TG+ RGFG+VT+A + ++ H + + +E+K PK + K +IF
Sbjct: 17 MKDRSTGRSRGFGYVTFASSQDAKEALKGEHFLGNRILEVKVATPKEEMRQPAKKVTRIF 76
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
V IP SV+E +F+ F ++G++ + + +DH++ + RG GFITF T +V+DL+ +
Sbjct: 77 VARIPPSVSESDFRRHFEKYGEITDLYMPKDHNSKQHRGIGFITFATSDSVEDLMEDTH- 135
Query: 121 LELAGAQVEVKKAEPKK 137
+L G V V +A PK+
Sbjct: 136 -DLGGTTVAVDRATPKE 151
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+D+ +FGD+++ +M+D ST RSRGFG++TF + Q + L KG L +EVK
Sbjct: 1 LRDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSQDAKEAL-KGEHF-LGNRILEVKV 58
Query: 133 AEPKKPNLPQPSYR 146
A PK+ + QP+ +
Sbjct: 59 ATPKE-EMRQPAKK 71
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + + + VDKV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 246 DPNTGRSRGFGFILFKEAASVDKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 300
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +D+F +FG+++ ++ D T++ RGF FITF E+ V +L K
Sbjct: 301 GGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFH- 359
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 360 NVSGSKCEIKVAQPKE 375
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 52 KDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 111
K + +K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V
Sbjct: 207 KQPELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASV 266
Query: 112 DDLLAKGNKLELAGAQVEVKKA 133
D +L + L G ++ KKA
Sbjct: 267 DKVLDQKEH-RLDGRVIDPKKA 287
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + T H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA PK+
Sbjct: 161 KIVIQKYHT-VKGHNCEVRKALPKQ 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ K A + + +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+
Sbjct: 1 MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 104 TFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
T+ T + VD + ++ G VE K+A
Sbjct: 61 TYATVEEVDAAM-NTTPHKVDGRVVEPKRA 89
>gi|432958384|ref|XP_004086005.1| PREDICTED: uncharacterized protein LOC101170742, partial [Oryzias
latipes]
Length = 372
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 10 RGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIFVGGIPS 66
R FGFVTY P + + + H + G VE+KR +PK + K KKIFVGG+ +
Sbjct: 132 RCFGFVTYLTPEEANAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKN 191
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 126
+ ED+ D+F Q+G+V+ +I+ + +T + RGFGF+ F + A D +A + + G
Sbjct: 192 DIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHFTDDYAADMAVAVPFHI-VNGH 250
Query: 127 QVEVKKAEPKK 137
+VEVKKA PK+
Sbjct: 251 RVEVKKAVPKQ 261
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS 51
+ ++ TG+ RGFGFV + D D + HI+NG +VE+K+ +PK + +
Sbjct: 214 ISEKTTGKKRGFGFVHFTDDYAADMAVAVPFHIVNGHRVEVKKAVPKQEMQA 265
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 89/141 (63%), Gaps = 7/141 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D++TG+ RGFGF+ + D + VDKV+E H ++G+Q++ PK A+ K KKIFV
Sbjct: 106 DQQTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRQID-----PKRAMAMKKEIVKKIFV 160
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ++++E +++F FG+++ ++ +D T + RGF FIT+ E +V +L K
Sbjct: 161 GGLKPDLSKEEIEEYFGAFGEIETIELPQDPKTEKRRGFVFITYKEEPSVKKVLEKKYHT 220
Query: 122 ELAGAQVEVKKAEPKKPNLPQ 142
+ G++ E+K A+PK+ + Q
Sbjct: 221 -VGGSKCEIKIAQPKEVYMQQ 240
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D T RSRGFGFI F +VD +L +
Sbjct: 73 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVDKVLEQ 132
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ L G Q++ K+A K +
Sbjct: 133 -KEHRLDGRQIDPKRAMAMKKEI 154
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
+D KT + RGF F+TY + V KV+E H + G + EIK PK
Sbjct: 189 QDPKTEKRRGFVFITYKEEPSVKKVLEKKYHTVGGSKCEIKIAQPK 234
>gi|401885117|gb|EJT49245.1| hypothetical protein A1Q1_01645 [Trichosporon asahii var. asahii
CBS 2479]
Length = 333
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGF F+T+ S V+ V+ H ++GK R IP+ ++ +T K+F
Sbjct: 21 MRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGKM----RAIPR----AEHERTAKVF 71
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV D K F Q+G V + +M D RS+GF F TF E V++ + + +
Sbjct: 72 VGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADESGVENAM-QHSG 130
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGF 171
+EL G Q+E+KKA+P+ + +N P A SGF G GGGF
Sbjct: 131 VELEGRQIEIKKAQPRGAGT---QVKTFNAPGGARTSGFNATSGMGMGGGF 178
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 71 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 130
D + +F QFGD+ IMRD T RSRGF F+TF + +V+ +LAK ++L+ G +
Sbjct: 3 DGLRSYFSQFGDIDNCTIMRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLD--GKMRAI 59
Query: 131 KKAEPKK 137
+AE ++
Sbjct: 60 PRAEHER 66
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+ +++ G+ R FGF+TY+ P D + H++ G VE+KR I + + D K
Sbjct: 38 VMNQQLGRSRCFGFITYSAPEEADAAMAAKPHVVEGNNVELKRAIAREDANNPDIVANVK 97
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLA 116
KIFVGG+ V + ++F QFG V++ +I+ D T R RGFGF+ F DT+ A LA
Sbjct: 98 KIFVGGVKDHVEAENLTEYFSQFGRVEKSEIISDKQTGRKRGFGFVYFEDTDSATKAALA 157
Query: 117 KGNKLELAGAQVEVKKAEPKKP 138
K + ++G +VEVKKA K+
Sbjct: 158 KYHT--ISGNKVEVKKALTKQE 177
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
K K+FVGG+ ++ + +F Q+G + + ++ + RSR FGFIT+ + D
Sbjct: 4 KLCKLFVGGLNVETTDEGLRKYFEQYGALTDCVVVMNQQLGRSRCFGFITYSAPEEADAA 63
Query: 115 LA------KGNKLELAGAQVEVKKAEPKKPNL 140
+A +GN +EL A + + + P++
Sbjct: 64 MAAKPHVVEGNNVELKRA---IAREDANNPDI 92
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADP-SVVDKVIEDTHIINGKQVEIKRTIPKGAVGS 51
+ D++TG+ RGFGFV + D S + H I+G +VE+K+ + K + +
Sbjct: 129 ISDKQTGRKRGFGFVYFEDTDSATKAALAKYHTISGNKVEVKKALTKQEIST 180
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 108 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHVINNKKVD-----PKKAKA----RHGKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K
Sbjct: 159 GGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQ 217
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 218 TINGKEVDVKKATPK 232
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 46 KGAVGSKD-FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ A G++D +K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI
Sbjct: 62 RSASGNQDSLNDRKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIV 121
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F +++D ++A G+ + + KK +PKK
Sbjct: 122 FAKAESLDKIMAAGDHV------INNKKVDPKK 148
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 78 DPNTGRSRGFAFIVFAKAESLDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 128
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K
Sbjct: 129 GGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQ 187
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 188 TINGKEVDVKKATPK 202
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +++D +++
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 104 AGDHV------INNKKVDPKK 118
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY+ S+VD+ + H I+G+ VE KR +P+ + S + K
Sbjct: 59 MKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 118
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F +G + + I+ D T + RGF F+ FD VD ++ +
Sbjct: 119 KLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+ +L G V+VKKA PK+ +
Sbjct: 179 K-QHQLNGKMVDVKKALPKQNEM 200
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G + + +M+D T RSRGFGFIT+ VD+
Sbjct: 26 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDE-A 84
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 85 QKARPHKIDGRVVEPKRAVPRQ 106
>gi|388858447|emb|CCF48041.1| related to HRP1-subunit of cleavage factor I [Ustilago hordei]
Length = 578
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 32/188 (17%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVG---------- 50
M+D TG+ RGF F+ + DP V+ V+ H ++GK ++ KR IP+ G
Sbjct: 198 MRDNLTGRSRGFAFLNFVDPKAVNTVMVREHYLDGKVIDPKRAIPRPQGGGSHQGQQQQQ 257
Query: 51 ----------SKDFKT-----KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTS 95
+ +F +K+FVGG+P+S+ F+ FF QFG + E M D T
Sbjct: 258 HPSGGNNYNINTNFSAPSSGGQKLFVGGLPASITPVTFRQFFEQFGPLSECTCMMDRETG 317
Query: 96 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQP----SYRRYNNP 151
+ RGFGF+T+ + ++ +L + + G +V+VK+A+ K N PQ +R +NP
Sbjct: 318 KPRGFGFLTYVDDASLQTVL-NTHPIVFDGKEVDVKRAQSK--NDPQSLQMRRQQRVDNP 374
Query: 152 KPAYGSGF 159
+ +G+
Sbjct: 375 EINANTGY 382
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED + +F QFG++ IMRD+ T RSRGF F+ F +AV+ ++ +
Sbjct: 167 KMFVGGLNWDTTEDSLRRYFSQFGEIGHCTIMRDNLTGRSRGFAFLNFVDPKAVNTVMVR 226
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 227 EHYLD--GKVIDPKRAIPR 243
>gi|145362676|ref|NP_974899.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008157|gb|AED95540.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 371
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 143/317 (45%), Gaps = 53/317 (16%)
Query: 26 VIEDTHIIN-GKQVEIKRTIPKG--AVGSKD----------FKTKKIFVGGIPSSVNEDE 72
+++++ +N VE K+ +P+ V +K +KKIFVGG+ SSV E E
Sbjct: 2 LLKESSCLNISLMVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAE 61
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
FK +F QFG + + +M DH T R RGFGFI++D+E+AVD +L K EL G VEVK
Sbjct: 62 FKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFH-ELNGKMVEVKL 120
Query: 133 AEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSG 192
A PK ++ + R N ++G+ + GF+ G G R S
Sbjct: 121 AVPK--DMALNTMRNQMNVN-SFGTSRISSLLNEYTQGFSPSPISGYGVKPE---VRYSP 174
Query: 193 AYGVRGG--GYG-GYGVGGEF--GGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGYDVTG 247
A G RGG +G GYG+ F YG G G P S GY+ G F
Sbjct: 175 AVGNRGGFSPFGHGYGIELNFEPNQTQNYGSGSSGGFGRPFSPGYAASLGRF-------- 226
Query: 248 DYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLG------------SSYGGSSGGAFFG 295
G ES GG+ VG G P + G G SS+ G+SG + G
Sbjct: 227 --GSQMES----GGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGMSSLG 280
Query: 296 SRGGYGGAGGSSR--YH 310
S G G +R YH
Sbjct: 281 SIGDNWGTVARARSSYH 297
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
M D +T +PRGFGF++Y VDKV++ T H +NGK VE+K +PK
Sbjct: 78 MYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPK 124
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 90 DPNTGRSRGFAFIVFAKAESLDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K
Sbjct: 141 GGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQ 199
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 200 TINGKEVDVKKATPK 214
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +++D +++
Sbjct: 56 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 115
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 116 AGDHV------INNKKVDPKK 130
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGF+TY VD+ + H I+ +QVE KR +P+ G + K
Sbjct: 1 MRDPMTRRSRGFGFITYKTAESVDEAQKARPHTIDKRQVEPKRAVPREDSGRPEAHMSLK 60
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +++F ++G ++ I+ D T RSRGFGFITFD VD ++ +
Sbjct: 61 KIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSRGFGFITFDDYDPVDKIVMQ 120
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + + G + EVKKA PK
Sbjct: 121 RHHM-INGHKSEVKKALPK 138
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ +VD + H I+ + VE KR + + + + + +
Sbjct: 50 MKDTKTKRSRGFGFITYSKAHMVDDAQNNRPHTIDSRVVETKRAVARQDIKNPEAGATVR 109
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI ED+ +++F +G+VQ I+ D +T + RGFGF+ FD VD +
Sbjct: 110 KLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLN 169
Query: 118 GNKLELAGAQVEVKKAEPK 136
++ G Q++VKKA PK
Sbjct: 170 A-PHKINGKQLDVKKALPK 187
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIF+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ VDD A
Sbjct: 18 RKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDD--A 75
Query: 117 KGNKLELAGAQ-VEVKKA 133
+ N+ ++ VE K+A
Sbjct: 76 QNNRPHTIDSRVVETKRA 93
>gi|157126220|ref|XP_001660855.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873326|gb|EAT37551.1| AAEL010467-PA [Aedes aegypti]
Length = 354
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ P +VD+ + H I+G+ VE KR +P+ + + K
Sbjct: 44 MKDPKTKRSRGFGFITYSKPYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVK 103
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +D+F FG+V I+ D + RGFGF+ FD VD ++ +
Sbjct: 104 KLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQ 163
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + ++VKKA PK+
Sbjct: 164 KSHT-IQNKMLDVKKALPKQ 182
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K +F ++G V + +M+D T RSRGFGFIT+ VD+
Sbjct: 12 RKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKPYMVDEAQN 71
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 72 K-RPHKIDGRVVEPKRAVPRQ 91
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 140/314 (44%), Gaps = 34/314 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKT--- 56
MK+ +TG+ RGFGFVT+ADP V++ +E+ H ++G+ ++ K P+ K +T
Sbjct: 50 MKNNETGRSRGFGFVTFADPENVERALENGPHTLDGRTIDPKPCNPRSQHKPK--RTGGY 107
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
K+F+GG+P ++ E + + FF ++G V E IM D +SRGFGF++F+ E AV+
Sbjct: 108 PKVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATT 167
Query: 117 KGNKLELAGAQVEVKKAEPKKPN------LPQPSYRRYNNPKPAYGSG------------ 158
+ + ++G QVEVKKAEP+ N + SY+ + P G+G
Sbjct: 168 D-HFVHISGKQVEVKKAEPRDGNQNNSNSMNTDSYQWGSPQAPPMGNGQMGGPPINMQSN 226
Query: 159 FGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGE----FGGYG 214
Y G+G G G G G S +G Y + +GGY
Sbjct: 227 MIQGYQGWGTSQPQQGYGGYGAGAAGAANAYQSWGAPPPPQQWGNYNATPQQTQGYGGYD 286
Query: 215 GYGGGMGAYRGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGP 274
Y + SG + +N + G G SG G G GP
Sbjct: 287 MYNNSGAGS----AGGYGSGNWNSWNMPPNTAGSAAGSTADMYTRPQSGPTAGPGASAGP 342
Query: 275 -SGYDIGLGSSYGG 287
SG GS YGG
Sbjct: 343 TSGGPSKPGSEYGG 356
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 41 KRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGF 100
K+ IP D + K+FVGG+ + + + +F ++G+V + +M+++ T RSRGF
Sbjct: 5 KKMIPAEL---DDHEKGKLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGF 61
Query: 101 GFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
GF+TF + V+ L G L G ++ K P+ + P+
Sbjct: 62 GFVTFADPENVERALENGPHT-LDGRTIDPKPCNPRSQHKPK 102
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 78 DPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 128
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 129 GGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 187
Query: 122 ELAGAQVEVKKAEPK 136
+ G V+VKKA PK
Sbjct: 188 TINGKAVDVKKATPK 202
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +A+D +++
Sbjct: 44 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 103
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 104 AGDHV------INNKKVDPKK 118
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 87/135 (64%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ + HIINGK+V+ PK A + KIFV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMSANDHIINGKKVD-----PKKAKA----RHGKIFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++++ K+FF QFG + + ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D +++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G +V+ KKA+ +
Sbjct: 114 ANDHI-INGKKVDPKKAKAR 132
>gi|390598799|gb|EIN08196.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 485
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ HI++GK ++ KR IP+ ++ + K+F
Sbjct: 164 MRD-ANGRSRCFAFLTFEDPASVNAVMVREHILDGKIIDPKRAIPR----TEHQRATKLF 218
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+ SV + ++FF QFG V + +M D T RS+GFGFI+ + + V +L GN
Sbjct: 219 IGGLAGSVTSESMREFFSQFGKVTDSTVMLDRETGRSKGFGFISLE-DVDVTPILGFGN- 276
Query: 121 LELAGAQVEVKKAEPK 136
LE+ G ++VK A+P+
Sbjct: 277 LEIDGKLIDVKLAQPR 292
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ K +F QFG V IMRD + RSR F F+TF+ +V+ ++ +
Sbjct: 133 KMFIGGLHWDTTDEALKSYFEQFGKVDACTIMRD-ANGRSRCFAFLTFEDPASVNAVMVR 191
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ L+ G ++ K+A P+
Sbjct: 192 EHILD--GKIIDPKRAIPR 208
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 62 MKDPRTKRSRGFGFITYSHSSMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 121
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG + + I+ D T + RGF F+ FD VD ++ +
Sbjct: 122 KLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 181
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+L G V+VKKA PK+ ++
Sbjct: 182 KQH-QLNGKMVDVKKALPKQNDM 203
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +++ K F ++G + + +M+D T RSRGFGFIT+ +D+
Sbjct: 29 MRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 87
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 88 QKARPHKIDGRVVEPKRAVPRQ 109
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 87/135 (64%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ + HIINGK+V+ PK A + KIFV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMSANDHIINGKKVD-----PKKAKA----RHGKIFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++++ K+FF QFG + + ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D +++
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G +V+ KKA+ +
Sbjct: 114 ANDHI-INGKKVDPKKAKAR 132
>gi|157126218|ref|XP_001660854.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873325|gb|EAT37550.1| AAEL010467-PB [Aedes aegypti]
Length = 348
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ P +VD+ + H I+G+ VE KR +P+ + + K
Sbjct: 44 MKDPKTKRSRGFGFITYSKPYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVK 103
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +D+F FG+V I+ D + RGFGF+ FD VD ++ +
Sbjct: 104 KLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQ 163
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + ++VKKA PK+
Sbjct: 164 KSHT-IQNKMLDVKKALPKQ 182
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K +F ++G V + +M+D T RSRGFGFIT+ VD+
Sbjct: 12 RKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKPYMVDEAQN 71
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 72 K-RPHKIDGRVVEPKRAVPRQ 91
>gi|406694599|gb|EKC97923.1| subunit of cleavage factor I, Hrp1p [Trichosporon asahii var.
asahii CBS 8904]
Length = 466
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 13/171 (7%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D TG+ RGF F+T+ S V+ V+ H ++GK R IP+ ++ +T K+F
Sbjct: 154 MRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGKM----RAIPR----AEHERTAKVF 204
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ SV D K F Q+G V + +M D RS+GF F TF E V++ + + +
Sbjct: 205 VGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADESGVENAM-QHSG 263
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGF 171
+EL G Q+E+KKA+P+ + +N P A SGF G GGGF
Sbjct: 264 VELEGRQIEIKKAQPRGAGT---QVKTFNAPGGARTSGFNATSGMGMGGGF 311
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
+ +F QFGD+ IMRD T RSRGF F+TF + +V+ +LAK ++L+ G + +
Sbjct: 138 LRSYFSQFGDIDNCTIMRD-PTGRSRGFAFLTFKSVSSVEAVLAKDHQLD--GKMRAIPR 194
Query: 133 AEPKK 137
AE ++
Sbjct: 195 AEHER 199
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + VDKV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 99 DPNTGRSRGFGFILFKDAASVDKVLEHKEHRLDGRLID-----PKKAMAMKKEPIKKIFV 153
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E+ V +L K
Sbjct: 154 GGLNPEAGEDKIREYFETFGEIEAVELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFH- 212
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 213 NVSGSKCEIKIAQPKE 228
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVL-E 124
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 125 HKEHRLDGRLIDPKKA 140
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD + H I+G+ VE KR + + + + + K
Sbjct: 49 MKDPKTKRSRGFGFITYSKAHMVDDAQLNRPHRIDGRMVETKRAVARQDIKNPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GGI +E++ +++F +G+VQ I+ D T + RGFGF+ FD VD +
Sbjct: 109 KLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLN 168
Query: 118 GNKLELAGAQVEVKKAEPK 136
++ G Q++VKKA PK
Sbjct: 169 APH-KINGKQLDVKKALPK 186
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL-L 115
+KIF+GG+ +++ K F ++G++ + +M+D T RSRGFGFIT+ VDD L
Sbjct: 17 RKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQL 76
Query: 116 AKGNKLELAGAQVEVKKA 133
+ ++++ G VE K+A
Sbjct: 77 NRPHRID--GRMVETKRA 92
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + VDKV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 86 DPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLID-----PKKAMAMKKDPIKKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E+ V +L K
Sbjct: 141 GGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFH- 199
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 200 NVSGSKCEIKIAQPKE 215
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 113 -KEHRLDGRLIDPKKA 127
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS--KDFKTK 57
MKD T + RGFGF+TY S+VD + H I+G++VE KR + + G+ K
Sbjct: 45 MKDPNTKKSRGFGFITYKRASMVDDAMRSRPHKIDGREVEPKRAVAREESGNPLAHMLVK 104
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI +ED +D+F ++G ++ ++ D T + RGF F+TFD VD ++
Sbjct: 105 KIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIV-- 162
Query: 118 GNKLE-LAGAQVEVKKAEPKK 137
G K + + EVKKA PK+
Sbjct: 163 GLKYHTINDHKSEVKKAVPKQ 183
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ +D K F ++G++ + +M+D +T +SRGFGFIT+ VDD
Sbjct: 11 QLRKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDA 70
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ + ++ G +VE K+A
Sbjct: 71 M-RSRPHKIDGREVEPKRA 88
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 83 DPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 133
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 134 GGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 192
Query: 122 ELAGAQVEVKKAEPK 136
++G V+VKKA PK
Sbjct: 193 TISGKAVDVKKATPK 207
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +A+D +++
Sbjct: 49 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 108
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 109 AGDHV------INNKKVDPKK 123
>gi|198435807|ref|XP_002121392.1| PREDICTED: similar to CiMsi [Ciona intestinalis]
Length = 392
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 10/146 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
MKD++TG RGFGF+T+A+PS V++V++ H ++ K ++ K PK + K
Sbjct: 42 MKDKETGVSRGFGFITFANPSSVNEVLKARPHTLDNKGIDPKPCTPKAVLQQKKATANSF 101
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQE--HQIMRDHSTSRSRGFGFITFDTEQAV 111
K+ KIF+GGI +++ K +F ++G V E + ++ + +GFGF+TF+ E +V
Sbjct: 102 TKSHKIFIGGISMEATQEDVKGYFERYGTVAEVVFVLNKEDPSKPHKGFGFVTFEDESSV 161
Query: 112 DDLLAKGNKLELAGAQVEVKKAEPKK 137
D +AK + + ++E KKAE ++
Sbjct: 162 DQAIAK-HYHTIKDKRIEAKKAESRE 186
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
KIFVGG+ + FK +F FG+V + +M+D T SRGFGFITF +V+++L A
Sbjct: 11 KIFVGGLSRQTTSEGFKQYFEGFGEVTDCVLMKDKETGVSRGFGFITFANPSSVNEVLKA 70
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + L+ G ++ K PK
Sbjct: 71 RPHTLDNKG--IDPKPCTPK 88
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 82 DPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 132
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 133 GGLSTELSDDDIKHFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 191
Query: 122 ELAGAQVEVKKAEPK 136
+ G V+VKKA PK
Sbjct: 192 TINGKAVDVKKATPK 206
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +A+D +++
Sbjct: 48 RKLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 107
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 108 AGDHV------INNKKVDPKK 122
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHVINNKKVD-----PKKAKA----RHGKIFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D ++A
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 114 AGDHV------INNKKVDPKK 128
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPK--GAVGSKDFKTK 57
MKD + + RGFGF+TY +P +VD + H I+GK VE KR +P+ K
Sbjct: 49 MKDSVSHRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSQTPESHMTVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FVG + V +DE +D+F ++G++ + +I+ T SRGFGF+TFD VD +L
Sbjct: 109 KLFVGALKKDVTQDELRDYFSKYGNIVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILY 168
Query: 117 KGNKLELAGAQVEVKKA 133
K + + ++ +VKKA
Sbjct: 169 KPH--HIGSSRADVKKA 183
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E KDF+ Q+G++ + +M+D + RSRGFGFIT+ + VD A
Sbjct: 17 RKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVD--AA 74
Query: 117 KGNKL-ELAGAQVEVKKAEPKK 137
+ N+ E+ G VE K+A P++
Sbjct: 75 QANRPHEIDGKTVEAKRAMPRE 96
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ + + +DKV+ HIIN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFNNAEAIDKVVAAGEHIINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF Q+G + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 144 GGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ +V+VKKA PK
Sbjct: 203 TIKDKEVDVKKATPK 217
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F Q+G+++ + D +T RSRGF FI F+ +A+D ++A
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVA 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G + + KK +PKK
Sbjct: 119 AGEHI------INNKKVDPKK 133
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ + + +DKV+ HIIN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFNNAEAIDKVVAAGEHIINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF Q+G + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 144 GGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ +V+VKKA PK
Sbjct: 203 TIKDKEVDVKKATPK 217
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F Q+G+++ + D +T RSRGF FI F+ +A+D ++A
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVA 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G + + KK +PKK
Sbjct: 119 AGEHI------INNKKVDPKK 133
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 80 DPNTGRSRGFAFIVFAKAESLDKIMGAGDHVINNKKVD-----PKKAKA----RHGKIFV 130
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K
Sbjct: 131 GGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQ 189
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 190 TINGKEVDVKKATPK 204
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +++D ++
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMG 105
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 106 AGDHV------INNKKVDPKK 120
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ H+IN K+V+ PK A + KIFV
Sbjct: 81 DPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVD-----PKKAKA----RHGKIFV 131
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 132 GGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 190
Query: 122 ELAGAQVEVKKAEPK 136
+ G V+VKKA PK
Sbjct: 191 TINGKAVDVKKATPK 205
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E ++ F +GD++ + D +T RSRGF FI F +A+D +++
Sbjct: 47 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMS 106
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 107 AGDHV------INNKKVDPKK 121
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ HIIN K+V+ PK A + K+FV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHIINNKKVD-----PKKAKA----RHGKVFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D ++A
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 114 AGDHI------INNKKVDPKK 128
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ HIIN K+V+ PK A + K+FV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHIINNKKVD-----PKKAKA----RHGKVFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D ++A
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 114 AGDHI------INNKKVDPKK 128
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI--EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
D +TG+ RGF F+ + P +DKV+ ED H +NGK+V+ PK A + KIF
Sbjct: 61 DPQTGRSRGFAFIIFNSPESIDKVVAFED-HTVNGKKVD-----PKKAKA----RQGKIF 110
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +++E K FF QFG+V E ++ D ++ +GF FIT+D+E V +LL K K
Sbjct: 111 VGGLSPETSDEEVKTFFEQFGNVVEMEMPFDKMKNQRKGFCFITYDSEAVVTELL-KTPK 169
Query: 121 LELAGAQVEVKKAEPK 136
+ G +V+VK+A PK
Sbjct: 170 QTVGGKEVDVKRATPK 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E + ++ F Q+G+++ + D T RSRGF FI F++ +++D ++A
Sbjct: 27 RKLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKVVA 86
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G +V+ KKA+ ++
Sbjct: 87 FEDHT-VNGKKVDPKKAKARQ 106
>gi|384249391|gb|EIE22873.1| hypothetical protein COCSUDRAFT_66433 [Coccomyxa subellipsoidea
C-169]
Length = 423
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 83/129 (64%), Gaps = 6/129 (4%)
Query: 10 RGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSV 68
RGFGFVT+ DP + +E H+I+GK+VE K +PK + G+ T+K+FVGG +
Sbjct: 121 RGFGFVTFKDPQNAQQFLEQREHVIDGKKVEAKAAVPKNS-GNSPMLTRKMFVGGT-GEI 178
Query: 69 NEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 128
+++EF+D+F+ FG++++ ++R SRGFGF+TF E +V+ L + L G QV
Sbjct: 179 SDEEFRDYFLGFGEIEDSVVLRKPDGG-SRGFGFVTFKDEMSVEKCLVMQHFLN--GKQV 235
Query: 129 EVKKAEPKK 137
E+K+A K+
Sbjct: 236 EIKRAVKKE 244
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 10 RGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAV 49
RGFGFVT+ D V+K + H +NGKQVEIKR + K +
Sbjct: 207 RGFGFVTFKDEMSVEKCLVMQHFLNGKQVEIKRAVKKEEM 246
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 52 KDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 111
++F K+F+GG+ ++ +++ ++ Q+G+V ++ +M RGFGF+TF Q
Sbjct: 81 QEFVEGKLFLGGLDNATSKEALLEYCGQWGEVSDYVLM------EGRGFGFVTFKDPQNA 134
Query: 112 DDLLAKGNKLELAGAQVEVKKAEPK 136
L + + + G +VE K A PK
Sbjct: 135 QQFLEQREHV-IDGKKVEAKAAVPK 158
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ HIIN K+V+ PK A + K+FV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHIINNKKVD-----PKKAKA----RHGKVFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D ++A
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 114 AGDHI------INNKKVDPKK 128
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + VDKV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 53 DPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLID-----PKKAMAMKKDPIKKIFV 107
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E+ V +L K
Sbjct: 108 GGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFH- 166
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 167 NVSGSKFEIKIAQPKE 182
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 20 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 79
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 80 KEH-RLDGRLIDPKKA 94
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + + VD+V++ H ++G+Q++ PK A+ K KKIFV
Sbjct: 79 DSNTGRSRGFGFILFKESDSVDRVLQQKEHRLDGRQID-----PKRAMAIKKEPVKKIFV 133
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F FG+++ ++ D TS+ RGF FITF E AV +L K
Sbjct: 134 GGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEKKYH- 192
Query: 122 ELAGAQVEVKKAEPKK 137
+ G++ E+K A+PK+
Sbjct: 193 NVCGSKCEIKIAQPKE 208
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 118 GNKLELAGAQVEVKKA 133
L G Q++ K+A
Sbjct: 106 KEH-RLDGRQIDPKRA 120
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 87/137 (63%), Gaps = 7/137 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S+VD+ + + H I+G++VE KR +P+ + D K
Sbjct: 42 MKDPQTKRSRGFGFITYSQSSMVDQAMSNRPHKIDGREVETKRAVPRDDIDKPDIAATVK 101
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FV GI +E++ ++F +FG++ I+ D + + +GFGFI +D +VD +L
Sbjct: 102 KMFVSGIKEQ-SENDLLEYFGKFGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVLI 160
Query: 117 KGNKLELAGAQVEVKKA 133
K + ++AG +++VKKA
Sbjct: 161 KSH--QVAGGKLDVKKA 175
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ + D K+FF Q+G++ + +M+D T RSRGFGFIT+ VD ++
Sbjct: 10 RKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQAMS 69
Query: 117 KGNKLELAGAQVEVKKAEPK----KPNL 140
++ G +VE K+A P+ KP++
Sbjct: 70 -NRPHKIDGREVETKRAVPRDDIDKPDI 96
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 62 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 121
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 122 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 181
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ +L G V+VKKA PK+
Sbjct: 182 K-QHQLNGKMVDVKKALPKQ 200
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 34 NGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHS 93
N Q E + P+ ++ + +K+F+GG+ ++ K F ++G++ + +M+D
Sbjct: 8 NNGQNEEQDDFPQDSITEPEH-MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPR 66
Query: 94 TSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
T RSRGFGFIT+ +D+ K ++ G VE K+A P++
Sbjct: 67 TKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKRAVPRQ 109
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK++ HIIN K+V+ PK A + K+FV
Sbjct: 88 DPNTGRSRGFAFIVFAKAESLDKIMAAGDHIINNKKVD-----PKKAKA----RHGKVFV 138
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K
Sbjct: 139 GGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQ 197
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 198 TINGKEVDVKKATPK 212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +GD++ + D +T RSRGF FI F +++D ++A
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 114 AGDHI------INNKKVDPKK 128
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 58 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 117
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 118 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ +L G V+VKKA PK+
Sbjct: 178 K-QHQLNGKMVDVKKALPKQ 196
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 25 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 83
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 QKSRPHKIDGRVVEPKRAVPRQ 105
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 94 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 153
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 154 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 213
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 214 KQH-QLNGKMVDVKKALPKQ 232
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 34 NGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHS 93
N Q E + P+ ++ + +K+F+GG+ ++ K F ++G++ + +M+D
Sbjct: 40 NNGQNEEQDDFPQDSITEPE-HMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPR 98
Query: 94 TSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
T RSRGFGFIT+ +D+ K ++ G VE K+A P++
Sbjct: 99 TKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKRAVPRQ 141
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ ++ +DKV+ H+IN K+V+ PK A + KIFV
Sbjct: 93 DPNTGRSRGFAFIVFSQADSIDKVLSAGDHVINNKKVD-----PKKAKA----RHGKIFV 143
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQ 202
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 203 SINGKEVDVKKATPK 217
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +D F +G+++ + D +T RSRGF FI F ++D +L+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLS 118
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
G+ + + KK +PKK
Sbjct: 119 AGDHV------INNKKVDPKK 133
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + +GFGF+TY+ +VD+ + H I+G+ VE KR +P+ + + K
Sbjct: 49 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FV G+ + E++ +++F FG++ ++ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ ++VKKA
Sbjct: 169 QNH-QIKDQHLDVKKA 183
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
T+K+F+GG+ + K+F+ Q+G++ + +M+D T RS+GFGFIT+ VD+
Sbjct: 16 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE-- 73
Query: 116 AKGNK-LELAGAQVEVKKAEPKK 137
A+ N+ ++ G VE K+A P++
Sbjct: 74 AQNNRPHKIDGRIVEPKRAVPRE 96
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F QFG ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGS--KDFKTK 57
M+D T + RGFGFVTYA VD + H ++G+ VE KRT+ + K
Sbjct: 43 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRTVSREDSQRPGAHLTVK 102
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ +
Sbjct: 103 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 162
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 163 KYHT-VNGHNCEVRKALSKQ 181
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 9 QLRKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEVDAA 68
Query: 115 L-AKGNKLE--LAGAQVEVKKAEPKKP 138
+ A+ +K++ + + V + + ++P
Sbjct: 69 MNARPHKVDGRVVEPKRTVSREDSQRP 95
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D VDKV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 98 DPNTGRSRGFGFILFKDAESVDKVLEHKEHRLDGRLID-----PKKAMAMKKDPIKKIFV 152
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 153 GGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFH- 211
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 212 NVSGSKCEIKIAQPKE 227
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F ++VD +L +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVL-E 123
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 124 HKEHRLDGRLIDPKKA 139
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFK--TK 57
M+D T + RGFGF+T+ +VD H ++G++VE KR +P+ G + + K
Sbjct: 46 MRDPSTKKSRGFGFITFRRAHMVDDAQAARPHKVDGREVEPKRAVPREEAGRPEAQATVK 105
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ V+E + +D+F QFG++ ++ + T R RGF F+ +D VD ++ K
Sbjct: 106 KVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLK 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + L G + EVKKA K+
Sbjct: 166 RHHM-LKGKRTEVKKALSKQ 184
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E+ K F Q+G+V + +MRD ST +SRGFGFITF VDD A
Sbjct: 14 RKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQA 73
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
++ G +VE K+A P++
Sbjct: 74 -ARPHKVDGREVEPKRAVPRE 93
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G+++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS--KDFKTK 57
+KD TG+ +GFGFVT+ + D ++D H +N +Q+++KR + + F+ K
Sbjct: 45 IKDSSTGRSKGFGFVTFETEAEADACMDDRPHTLNSRQIDVKRAVSREESVKPGAHFQVK 104
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +E K++F QFG ++ ++ + + + RGF FITF+ VD L+AK
Sbjct: 105 KIFIGGLKDGCDETNLKEYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLVAK 164
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ + G + EVKKA K
Sbjct: 165 RHHY-VNGVRCEVKKALSK 182
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 50 GSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 109
+++ + +K+F+GGI ++ D+F ++G +++ +++D ST RS+GFGF+TF+TE
Sbjct: 6 ATEEEQLRKLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEA 65
Query: 110 AVDDLLAKGNKLELAGAQVEVKKA 133
D + L Q++VK+A
Sbjct: 66 EADACM-DDRPHTLNSRQIDVKRA 88
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 49 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED+ K +F +G + I+ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 169 RNH-QIRGKHVDVKKA 183
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 76 NARPHKVD--GRVVEPKRAVPRQ 96
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF---KT 56
MKD T + RGFGFVTY+ V+ ++ H ++G+ VE KR + + SK F
Sbjct: 65 MKDPNTKRSRGFGFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSRED-SSKPFAHTTV 123
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
KKIFVGGI E+ +D+F QFG ++ +IM DH T RGF F+TFD +VD ++
Sbjct: 124 KKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVI 183
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G EV+KA K+
Sbjct: 184 QKYHT-VNGHNCEVRKALSKQ 203
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-D 113
+ +K+F+GG+ +D + F Q+G + + +M+D +T RSRGFGF+T+ + V+
Sbjct: 31 QLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEVNAS 90
Query: 114 LLAKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 91 MDARPHKVD--GRLVEPKRA 108
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 8 QPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIFVGGI 64
+ R FGFVTY+ D + HI++G V++KR + + G + K KKIFVGG+
Sbjct: 45 RSRCFGFVTYSSTEEADAAMSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGL 104
Query: 65 PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 124
+ ++ +D+F QFG +++ Q++ D T + RGFGF+ FD + D + +
Sbjct: 105 KDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFH-SIC 163
Query: 125 GAQVEVKKAEPKKP 138
G +VEVKKA K+
Sbjct: 164 GHKVEVKKALTKQE 177
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA- 116
K+FVGG+ ++ + F Q+G + + ++ + RSR FGF+T+ + + D ++
Sbjct: 7 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADAAMSA 66
Query: 117 -----KGNKLELAGAQVEVKKAEPKKPNL 140
GN ++L A V + + KP +
Sbjct: 67 RPHIVDGNNVDLKRA---VAREDAGKPEM 92
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDK-VIEDTHIINGKQVEIKRTIPKGAVGS 51
+ D+ TG+ RGFGFV + D DK V+ H I G +VE+K+ + K + S
Sbjct: 129 ITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQEMQS 180
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 24 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 78
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 79 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 138
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 139 KIVIQKYHT-VNGHNCEVRKALSKQ 162
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 67 SVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 125
++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 2 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 59
Query: 126 AQVEVKKA 133
VE K+A
Sbjct: 60 RVVEPKRA 67
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 61 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 115
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 116 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 175
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 176 KIVIQKYHT-VNGHNCEVRKALSKQ 199
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 27 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 86
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 87 MNARPHKVD--GRVVEPKRA 104
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 42 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVK 101
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E++ + +F +G + I+ D T + RGFGF+ FD VD + +
Sbjct: 102 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 161
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 162 RNH-QIRGKHVDVKKA 176
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F Q+G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 9 VRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 68
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ ++++ G VE K+A P++
Sbjct: 69 NARPHRVD--GRVVEPKRAVPRQ 89
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D+ TG+ RGFGF+ + DP+ V+KV+E H ++G+ ++ PK A+ K KK+FV
Sbjct: 34 DQGTGRSRGFGFILFKDPASVEKVLEQKEHKLDGRVID-----PKRALAMKKEPVKKVFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++ +++F +FG+++ ++ +D T + RGF FIT+ E V L NK
Sbjct: 89 GGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKALE--NKF 146
Query: 122 ELA-GAQVEVKKAEPKK 137
G++ E+K A+PK+
Sbjct: 147 HTVGGSKCEIKIAQPKE 163
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FGDV + I D T RSRGFGFI F +V+ +L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 118 GNKLELAGAQVEVKKA 133
+ +L G ++ K+A
Sbjct: 61 -KEHKLDGRVIDPKRA 75
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF 54
+D KT + RGF F+TY + + V K +E+ H + G + EIK PK + +
Sbjct: 117 QDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIAQPKEVYQQQQY 170
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +++F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A
Sbjct: 15 KLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74
Query: 117 KGNKLELAGAQVEVKKA 133
+ +K++ G VE K+A
Sbjct: 75 RPHKVD--GRVVEPKRA 89
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFA 172
++ + + G EV+KA K+ S + G+ G +Y +G
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ---EMASASSSQRGRSGSGNFGGGSYNDFGNYNNQ 216
Query: 173 GGGFGGSGGGGGGGGYRSSGAYG 195
FG GG GG RSSG YG
Sbjct: 217 SSNFGPMKGGNFGG--RSSGPYG 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVG--SKDFKTK 57
M+D T + RGFGFVT+ + VD ++ H+I+GK V+ KR +P+ + TK
Sbjct: 55 MRDPTTKRSRGFGFVTFTAKTEVDAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTK 114
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ NED D+F ++G+V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 115 RLYVSGVREDHNEDMLTDYFSKYGNVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 175 KSHM-VNGHRCDVRK 188
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+ S+ ++ ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMK 82
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G V+ K+A P+
Sbjct: 83 QRPHV-IDGKTVDPKRAVPR 101
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ +++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 58 MKDPRTKRSRGFGFITYSHSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 117
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG + + I+ D T + RGF F+ FD VD ++ +
Sbjct: 118 KLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
Query: 118 GNKLELAGAQVEVKKAEPKKPNL 140
+L G V+VKKA PK+ +
Sbjct: 178 KQH-QLNGKMVDVKKALPKQNEM 199
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G + + +M+D T RSRGFGFIT+ +D+
Sbjct: 25 MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDE-A 83
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 QKARPHKIDGRVVEPKRAVPRQ 105
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 59 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 118
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 119 KLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 179 KQH-QLNGKMVDVKKALPKQ 197
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 84
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 85 QKSRPHKIDGRVVEPKRAVPRQ 106
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 8 QPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKIFVGGI 64
+ R FGFVTY+ D + HI++G V++KR + + G + K KKIFVGG+
Sbjct: 42 RSRCFGFVTYSSIEEADAAMSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGL 101
Query: 65 PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 124
+ ++ +D+F QFG +++ Q++ D T + RGFGF+ FD + D + +
Sbjct: 102 KDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFH-SIC 160
Query: 125 GAQVEVKKAEPKKP 138
G +VEVKKA K+
Sbjct: 161 GHKVEVKKALTKQE 174
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDK-VIEDTHIINGKQVEIKRTIPKGAVGS 51
+ D+ TG+ RGFGFV + D DK V+ H I G +VE+K+ + K + S
Sbjct: 126 ITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQEMQS 177
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + F Q+G + + ++ + RSR FGF+T+ + + D ++
Sbjct: 4 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSIEEADAAMSA 63
Query: 118 GNKLELAGAQVEVKKAEPK----KPNL 140
+ + G V++K+A + KP +
Sbjct: 64 RPHI-VDGNNVDLKRAVAREDAGKPEM 89
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKTAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ ++IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLE--LAGAQVEVKKAEPKKP 138
+ A+ +K++ + + V + + ++P
Sbjct: 72 MNARPHKVDGRVVEPKTAVSREDSQRP 98
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 52 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 106
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 107 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 166
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 167 KIVIQKYHT-VNGHNCEVRKALSKQ 190
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 18 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 77
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 78 MNARPHKVD--GRVVEPKRA 95
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEKVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD T + RGFGF+TY+ +VD D H ++G+ VE KR +P+ +G + K
Sbjct: 51 MKDPTTKRSRGFGFITYSRAHMVDDAQNDRPHKVDGRVVEPKRAVPRQDIGRPEAGATVK 110
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ V E++ ++ F +G + I+ D T + RGFGFI F+ VD +
Sbjct: 111 KLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKICLY 170
Query: 118 GNKLELAGAQVEVKKAEPK 136
+ ++ G ++VKKA K
Sbjct: 171 RHH-QIHGKHIDVKKALSK 188
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K F ++G++ + +M+D +T RSRGFGFIT+ VDD A
Sbjct: 19 RKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDD--A 76
Query: 117 KGNK-LELAGAQVEVKKAEPKK 137
+ ++ ++ G VE K+A P++
Sbjct: 77 QNDRPHKVDGRVVEPKRAVPRQ 98
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD ++D
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VKGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 58 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 117
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 118 KLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 178 KQH-QLNGKMVDVKKALPKQ 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 25 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 83
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 84 QKSRPHKIDGRVVEPKRAVPRQ 105
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 59 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 118
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 119 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 179 KQH-QLNGKMVDVKKALPKQ 197
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 84
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 85 QKSRPHKIDGRVVEPKRAVPRQ 106
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSRSEQWGALTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 41 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 95
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 96 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 155
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 156 KIVIQKYHT-VNGHNCEVRKALSKQ 179
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 7 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 66
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 67 MNARPHKVD--GRVVEPKRA 84
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALCKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ K A + + +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+
Sbjct: 1 MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 104 TFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 133
T+ T + VD + A+ +K++ G VE K+A
Sbjct: 61 TYATVEEVDAAMNARPHKVD--GRVVEPKRA 89
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 70 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 129
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 130 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 189
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 190 KQH-QLNGKMVDVKKALPKQ 208
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 37 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 95
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 96 QKSRPHKIDGRVVEPKRAVPRQ 117
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 63 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 122
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 183 KQH-QLNGKMVDVKKALPKQ 201
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 88
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 89 QKSRPHKIDGRVVEPKRAVPRQ 110
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 237 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 292
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL N+
Sbjct: 293 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE--NRY 350
Query: 122 ELAGA-QVEVKKAEPKK 137
G+ + E+K A+PK+
Sbjct: 351 HQIGSGKCEIKVAQPKE 367
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA- 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 204 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 263
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 264 KEHKLD--GKLIDPKRAK 279
>gi|47086749|ref|NP_997810.1| heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
gi|44890516|gb|AAH66672.1| Zgc:77366 [Danio rerio]
Length = 305
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+++++ + R FGFVTY+ P D + HI++G VE+KR + + G + K K
Sbjct: 42 VQNQQLKRSRCFGFVTYSSPDEADSAMSARPHILDGNNVELKRAVAREDAGKPEALAKVK 101
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ + ED +D F QFG V++ +++ D T + RGFGF+ F+ + D +
Sbjct: 102 KIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVL 161
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G +VEVKKA K+
Sbjct: 162 KFHM-INGHKVEVKKALTKQ 180
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +D ++ F Q+G + + ++++ RSR FGF+T+ + D ++
Sbjct: 11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAMSA 70
Query: 118 GNKLELAGAQVEVKKA 133
+ L G VE+K+A
Sbjct: 71 RPHI-LDGNNVELKRA 85
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 15/144 (10%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + +PS VDKV+ + H ++G+Q++ PK A+ K KKIFV
Sbjct: 103 DPNTGRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQID-----PKKAMAMKKEPVKKIFV 157
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK---- 117
GG+ E+ +++F FG+++ ++ D +++ RGF FITF E+AV +L K
Sbjct: 158 GGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHN 217
Query: 118 --GNKLELAGAQ--VEVKKAEPKK 137
G K + +G + E+K A+PK+
Sbjct: 218 VSGTK-DTSGKEGLCEIKIAQPKE 240
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F VD +LA+
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 118 GNKLELAGAQVEVKKA 133
+ L G Q++ KKA
Sbjct: 130 -KEHRLDGRQIDPKKA 144
>gi|426191766|gb|EKV41706.1| hypothetical protein AGABI2DRAFT_80008 [Agaricus bisporus var.
bisporus H97]
Length = 354
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 19/147 (12%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ H+++GK ++ KR IP+ + + K+F
Sbjct: 31 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHVLDGKIIDPKRAIPR----QEHQRATKLF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+P SV + ++FF QFG V + +M D T RS+GFGF++F+ V L GN
Sbjct: 86 IGGLPGSVTSESMREFFSQFGKVIDSTVMLDRETGRSKGFGFVSFENTD-VSSFLGFGN- 143
Query: 121 LELAGAQVEVKKAEPKKPNLPQPSYRR 147
LE+ G L QP Y+R
Sbjct: 144 LEIDGKL------------LAQPRYQR 158
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ +D +D+F QFG V IMRD + RSR F F+TF+ +V+ ++ +
Sbjct: 1 MFIGGLNWDTTDDTLRDYFTQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 60 HVLD--GKIIDPKRAIPRQ 76
>gi|312379326|gb|EFR25637.1| hypothetical protein AND_08860 [Anopheles darlingi]
Length = 357
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ ++D + H I+G+ VE KR +P+ + + K
Sbjct: 61 MKDPKTKRSRGFGFITYSKSYMIDDTQANRPHKIDGRVVEPKRAVPRQDINRPEAGSSVK 120
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F ++G+V I+ D + RGFGF+ FD VD ++ +
Sbjct: 121 KLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQ 180
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + ++VKKA PK+
Sbjct: 181 KSHT-IQNKLLDVKKALPKQ 199
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ +D K +F ++G V + +M+D T RSRGFGFIT+ +DD A
Sbjct: 29 RKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYMIDDTQA 88
Query: 117 KGNKLELAGAQVEVKKAEPKKP-NLPQ 142
++ G VE K+A P++ N P+
Sbjct: 89 -NRPHKIDGRVVEPKRAVPRQDINRPE 114
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKE 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 15/144 (10%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + +PS VDKV+ + H ++G+Q++ PK A+ K KKIFV
Sbjct: 103 DPNTGRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQID-----PKKAMAMKKEPVKKIFV 157
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK---- 117
GG+ E+ +++F FG+++ ++ D +++ RGF FITF E+AV +L K
Sbjct: 158 GGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHN 217
Query: 118 --GNKLELAGAQ--VEVKKAEPKK 137
G K + +G + E+K A+PK+
Sbjct: 218 VSGTK-DTSGKEGLCEIKIAQPKE 240
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD F +FG+V + I D +T RSRGFGFI F VD +LA+
Sbjct: 70 KMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQ 129
Query: 118 GNKLELAGAQVEVKKA 133
+ L G Q++ KKA
Sbjct: 130 -KEHRLDGRQIDPKKA 144
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F QFG ++ +IM D + + +GF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M++ + RGFGFVTY+ VD+ ++ H ++G+ VE PK AV +D
Sbjct: 39 MREPSCKRSRGFGFVTYSSLREVDEAMKARPHKVDGRVVE-----PKRAVSREDSNKPGA 93
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI ED+ +D+F ++G ++ IM + ST + RGF F+TFD VD
Sbjct: 94 HLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSTGKKRGFCFVTFDDHDTVD 153
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++A+ + EV+KA K+
Sbjct: 154 KIVAQKYHT-INSHNCEVRKALSKQ 177
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F ++G + + +MR+ S RSRGFGF+T+ + + VD+
Sbjct: 5 QLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREVDEA 64
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ K ++ G VE K+A
Sbjct: 65 M-KARPHKVDGRVVEPKRA 82
>gi|119617173|gb|EAW96767.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_g [Homo
sapiens]
Length = 319
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 55
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 56 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 115
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 116 KIVIQKYHT-VNGHNCEVRKALSKQ 139
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD +T + RGFGF+TY+ S++D+ + H I+G+ VE KR +P+ + S + K
Sbjct: 61 MKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVK 120
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVG + +E +D+F FG++ + I+ D T + RGF F+ FD VD ++ +
Sbjct: 121 KLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 180
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+L G V+VKKA PK+
Sbjct: 181 KQH-QLNGKMVDVKKALPKQ 199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 28 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-A 86
Query: 116 AKGNKLELAGAQVEVKKAEPKK 137
K ++ G VE K+A P++
Sbjct: 87 QKSRPHKIDGRVVEPKRAVPRQ 108
>gi|296211878|ref|XP_002752596.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Callithrix
jacchus]
Length = 327
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 55
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 56 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 115
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 116 KIVIQKYHT-VNGHNCEVRKALSKQ 139
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+ T RGFGFVTYA VD + H +NG+ VE PK AV +D
Sbjct: 46 MRHPNTKHSRGFGFVTYATVEEVDAAMNARPHKVNGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVG I E +D+F Q+G ++ +IM D S+ + +GF F+TFD +VD
Sbjct: 101 HLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ K + G EV+KA K+
Sbjct: 161 KIIIKKYHT-VNGHNCEVRKALSKQ 184
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + F Q+G + +MR +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K+ G VE K+A
Sbjct: 72 MNARPHKVN--GRVVEPKRA 89
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY +P +VD + H I+GK VE KR +P+ S +
Sbjct: 49 MKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVT 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FVGG+ V +E +++F ++G++ E +++ + SRGFGF+TFD VD +L
Sbjct: 109 KLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILY 168
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K + + ++ +VKKA K+
Sbjct: 169 KPH--HIGSSRADVKKALSKE 187
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AA 74
Query: 117 KGNK-LELAGAQVEVKKAEPKK 137
+ N+ E+ G VE K+A P++
Sbjct: 75 QANRPHEIDGKTVEAKRAMPRE 96
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYH-PVNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY +P +VD + H I+GK VE KR +P+ S +
Sbjct: 49 MKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVT 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FVGG+ V +E +++F ++G++ E +++ + SRGFGF+TFD VD +L
Sbjct: 109 KLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILY 168
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K + + ++ +VKKA K+
Sbjct: 169 KPH--HIGSSRADVKKALSKE 187
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AA 74
Query: 117 KGNK-LELAGAQVEVKKAEPKK 137
+ N+ E+ G VE K+A P++
Sbjct: 75 QANRPHEIDGKTVEAKRAMPRE 96
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVLREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+ A+ +K V+ + EPK+ L + S R
Sbjct: 72 MNARPHK-------VDGRVVEPKRAVLREDSQR 97
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + +P V+KV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 124 DPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLID-----PKKAMAMKKDPVKKIFV 178
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 179 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFH- 237
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 238 NVSGSKCEIKVAQPKE 253
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 151 KEH-RLDGRLIDPKKA 165
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 28/186 (15%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +G+ RGFGFV + DPS V+KV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 90 DSDSGRSRGFGFVLFKDPSSVEKVLEQKEHRLDGRLID-----PKRAMAMKKEPVKKIFV 144
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E+ +++F ++G+++ ++ D +++ RGF FIT+ E + L NK
Sbjct: 145 GGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLE--NKF 202
Query: 122 E-LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSG 180
+ G++ E+K A+PK+ Q Y G GG AG G+GG+
Sbjct: 203 HTIEGSRCELKLAQPKEVYQQQ-------------------QYRGRSGGSRAGWGYGGNN 243
Query: 181 GGGGGG 186
G G
Sbjct: 244 QGWNQG 249
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 53 DFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
D T K+FVGG+ ++ + KD+F +FG+V + I D + RSRGFGF+ F +V+
Sbjct: 52 DEDTGKMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVE 111
Query: 113 DLLAKGNKLELAGAQVEVKKA 133
+L + + L G ++ K+A
Sbjct: 112 KVLEQ-KEHRLDGRLIDPKRA 131
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKPFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
++D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 LRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEVHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA PK+
Sbjct: 161 KIVIQKYHT-VNGRSCEVRKALPKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + + F Q+G + ++ ++RD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 110 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 164
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 165 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 224
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 225 -VSGSKCEIKVAQPKE 239
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 77 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 136
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 137 -KEHRLDGRVIDPKKA 151
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ Y +DKV+ H++N K+V+ KR K G KIFV
Sbjct: 102 DPNTGRSRGFAFIVYKASDSIDKVVAAGEHVLNNKKVDPKRA--KARPG-------KIFV 152
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ S ++++E K FF QFG + E ++ D ++ +GF FIT+++ Q V++LL K K
Sbjct: 153 GGLTSDISDEEIKTFFGQFGTIVEVELPFDKQKNQRKGFCFITYESVQVVNELL-KTPKQ 211
Query: 122 ELAGAQVEVKKAEPK 136
+AG +V+VKKA PK
Sbjct: 212 TIAGKEVDVKKATPK 226
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E + ++ F Q+G+++ + D +T RSRGF FI + ++D ++A
Sbjct: 68 RKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDKVVA 127
Query: 117 KGNKLELAGAQVEVKKAE 134
G + L +V+ K+A+
Sbjct: 128 AGEHV-LNNKKVDPKRAK 144
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDCFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+ + + G+ R FGF+TY+ P D + + H+++G VE+KR + + + + K
Sbjct: 38 VMNNQLGRSRCFGFITYSTPEEADTAMAASPHVVDGHNVELKRAVARQDADNPEVLANVK 97
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLA 116
KIFVGG+ + D+F QFG V++ +I+ D T + RGFGF+ F DT+ A +L
Sbjct: 98 KIFVGGVQDHIEAQHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLT 157
Query: 117 KGNKLELAGAQVEVKKAEPKKP 138
+ + ++G +VE KKA K+
Sbjct: 158 RYHT--ISGNKVEAKKAMTKQE 177
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ N++ + +F ++G + + ++ ++ RSR FGFIT+ T + D +A
Sbjct: 7 KLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEADTAMAA 66
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + G VE+K+A ++
Sbjct: 67 SPHV-VDGHNVELKRAVARQ 85
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ +A +DK + HIIN K+V+ PK A + KIFV
Sbjct: 90 DPTTGRSRGFAFIVFAKAESLDKAMAHGDHIINNKKVD-----PKKAKA----RHGKIFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + +++D+ K FF QFG + + ++ D + ++ +GF FITF++EQ ++LL K +K
Sbjct: 141 GGLSTELSDDDIKTFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVANELL-KTSKQ 199
Query: 122 ELAGAQVEVKKAEPK 136
++G +VEVKKA P+
Sbjct: 200 TISGKEVEVKKATPR 214
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 46 KGAVGSKD-FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 104
+ A G++D +K+FVGG+ + E +D F FGD++ + D +T RSRGF FI
Sbjct: 44 RSAQGNQDSLNDRKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIV 103
Query: 105 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
F +++D +A G+ + + KK +PKK
Sbjct: 104 FAKAESLDKAMAHGDHI------INNKKVDPKK 130
>gi|343172816|gb|AEL99111.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+TKKIFVGG+P S+ ++ F+ +F FG V + IM D +T R RGFGFI+FD+E AVD
Sbjct: 32 IRTKKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDR 91
Query: 114 LLAKGNKLELAGAQVEVKKAEPKKPN 139
+L + +L G QVEVK+A PK N
Sbjct: 92 VL-QSTFHDLDGKQVEVKRALPKDAN 116
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D+ T +PRGFGF+++ VD+V++ T H ++GKQVE+KR +PK A
Sbjct: 67 MFDQNTQRPRGFGFISFDSEDAVDRVLQSTFHDLDGKQVEVKRALPKDA 115
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + + + VDKV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 146 DPNTGRSRGFGFILFKEAASVDKVLEQKEHKLDGRVID-----PKKAMAMKKDPVKKIFV 200
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 201 GGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFH- 259
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 260 NVSGSKCEIKVAQPKE 275
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 113 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDKVLEQ 172
Query: 118 GNKLELAGAQVEVKKA 133
+ +L G ++ KKA
Sbjct: 173 -KEHKLDGRVIDPKKA 187
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIIIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|343172818|gb|AEL99112.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 113
+TKKIFVGG+P S+ ++ F+ +F FG V + IM D +T R RGFGFI+FD+E AVD
Sbjct: 32 IRTKKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDR 91
Query: 114 LLAKGNKLELAGAQVEVKKAEPKKPN 139
+L + +L G QVEVK+A PK N
Sbjct: 92 VL-QSTFHDLDGKQVEVKRALPKDAN 116
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
M D+ T +PRGFGF+++ VD+V++ T H ++GKQVE+KR +PK A
Sbjct: 67 MFDQNTQRPRGFGFISFDSEDAVDRVLQSTFHDLDGKQVEVKRALPKDA 115
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + +P V+KV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 88 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFH- 146
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 147 NVSGSKCEIKVAQPKE 162
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRLIDPKKA 74
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 108 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 162
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FITF E V +L K
Sbjct: 163 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHT 222
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 223 -VSGSKCEIKVAQPKE 237
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 135 -KEHRLDGRVIDPKKA 149
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + +P V+KV+E H ++G+ ++ PK A+ K KKIFV
Sbjct: 34 DPNTGRSRGFGFILFKEPGSVEKVLEQKEHRLDGRLID-----PKKAMAMKKDPVKKIFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 89 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFH- 147
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 148 NVSGSKCEIKVAQPKE 163
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 KEH-RLDGRLIDPKKA 75
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KTVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + R F F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 38 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 92
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 93 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 152
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 153 KIVIQKYHT-VNGHNCEVRKALSKQ 176
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 4 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 63
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 64 MNARPHKVD--GRVVEPKRA 81
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 49 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E++ + +F +G + I+ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 169 RNH-QIRGKHVDVKKA 183
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 76 NARPHKVD--GRVVEPKRAVPRQ 96
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 72 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 126
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D T++ RGF FITF E+ V +L K
Sbjct: 127 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHT 186
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 187 -ISGSKCEIKVAQPKE 201
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 42 RTIPK---GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSR 98
RTIP+ A ++ +TK +FVGG+ ++ + KD+F +FG+V + I D +T RSR
Sbjct: 21 RTIPRPRGDARVERERRTK-MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSR 79
Query: 99 GFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
GFGFI F +V+ +L + L G ++ KKA
Sbjct: 80 GFGFILFKDAASVEKVLDQKEH-RLDGRVIDPKKA 113
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 44 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 98
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 99 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 158
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 159 KIVIQKYHT-VNGHNCEVRKALSKQ 182
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 10 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 69
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 70 MNARPHKVD--GRVVEPKRA 87
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 49 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E++ + +F +G + I+ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 169 RNH-QIRGKHVDVKKA 183
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 76 NARPHKVD--GRVVEPKRAVPRQ 96
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY +P +VD + H I+GK VE KR +P+ S +
Sbjct: 49 MKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVT 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FVGG+ V +E +++F ++G++ E +++ + SRGFGF+TFD VD +L
Sbjct: 109 KLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILY 168
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K + + ++ +VKKA K+
Sbjct: 169 KPH--HIGSSRADVKKALSKE 187
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AA 74
Query: 117 KGNK-LELAGAQVEVKKAEPKK 137
+ N+ E+ G VE K+A P++
Sbjct: 75 QANRPHEIDGKTVEAKRAMPRE 96
>gi|297690158|ref|XP_002822492.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 320
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD V+ H + G+ VE PK AV +D
Sbjct: 46 MRDPNTNRSRGFGFVTYATVEEVDTVMNARPHKVGGRVVE-----PKTAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G + +IM D + + + F FITFD + D
Sbjct: 101 HLTVKKIFVGGIKEDTEEHPLRDYFEQYGKTEVIEIMTDQGSGKKKDFAFITFDNHDSTD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQP 143
++ + + + G EV+KA K+ P
Sbjct: 161 KIVIQKYHI-VNGRNCEVRKALSKQEMASAP 190
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K F+ G+ +++ + Q+G + + +MRD +T+RSRGFGF+T+ T + VD +
Sbjct: 12 QLRKPFIRGLRFETSDESLRSHSEQWGMLTDCVVMRDPNTNRSRGFGFVTYATVEEVDTV 71
Query: 115 L-AKGNKL--ELAGAQVEVKKAEPKKP 138
+ A+ +K+ + + V + + ++P
Sbjct: 72 MNARPHKVGGRVVEPKTAVSREDSQRP 98
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 15/140 (10%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTK--KI 59
D +TG+ RGF F+ + + +DKV HIIN K+V+ PK A K + KI
Sbjct: 89 DPQTGRSRGFAFIVFTNTEAIDKVSSAGEHIINSKKVD-----PKKA------KARHGKI 137
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN 119
FVGG+ + ++++E + +F QFG++ E ++ D S+ F FIT D+EQ V DLL K +
Sbjct: 138 FVGGLTTEISDEEIQTYFSQFGNIVEVEMPFDKQKSQRTDFCFITLDSEQVVTDLL-KTS 196
Query: 120 KLELAGAQVEVKKAEPKKPN 139
+++ +V+VK+A PK N
Sbjct: 197 IQKISVKEVDVKRATPKPEN 216
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 47 GAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD 106
AV ++ +K+FVGG+ E E +D F +FG+++ + D T RSRGF FI F
Sbjct: 45 SAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFT 104
Query: 107 TEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 137
+A+D + + G + + KK +PKK
Sbjct: 105 NTEAIDKVSSAGEHI------INSKKVDPKK 129
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 102 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 156
Query: 62 GGI-PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
GG+ P S E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 157 GGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFH 216
Query: 121 LELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 217 T-VSGSKCEIKVAQPKE 232
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 42 RTIPKGAVGSKDFKTK--KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
RT P+ + + + K+FVGG+ ++ + KD+F +FG+V + I D +T RSRG
Sbjct: 51 RTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 110
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
FGFI F +V+ +L + L G ++ KKA
Sbjct: 111 FGFILFKDAASVEKVLDQKEH-RLDGRVIDPKKA 143
>gi|347967733|ref|XP_563821.4| AGAP002374-PA [Anopheles gambiae str. PEST]
gi|333468325|gb|EAL40938.4| AGAP002374-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ ++D H I+G+ VE KR +P+ + + K
Sbjct: 61 MKDPKTKRSRGFGFITYSKSYMIDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVK 120
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F ++G+V I+ D + RGFGF+ FD VD ++ +
Sbjct: 121 KLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQ 180
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + ++VKKA PK+
Sbjct: 181 KSHT-IQNKLLDVKKALPKQ 199
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ +D K +F ++G V + +M+D T RSRGFGFIT+ +DD A
Sbjct: 29 RKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYMIDDAQA 88
Query: 117 KGNKLELAGAQVEVKKAEPKKP-NLPQ 142
++ G VE K+A P++ N P+
Sbjct: 89 -SRPHKIDGRVVEPKRAVPRQDINRPE 114
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 16/146 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M++ + RGFGFVTY+ VD+ ++ H ++G+ VE PK AV +D
Sbjct: 50 MREPACKRSRGFGFVTYSCLREVDEAMKARPHKVDGRVVE-----PKRAVSREDSNKPGA 104
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI ED+ +D+F ++G ++ IM + S+ + RGF F+TFD VD
Sbjct: 105 HLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVD 164
Query: 113 DLLA-KGNKLELAGAQVEVKKAEPKK 137
++A K + + L EV+KA K+
Sbjct: 165 KIVAQKYHTINLHNC--EVRKALSKQ 188
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F ++G + + +MR+ + RSRGFGF+T+ + VD+
Sbjct: 16 QLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEA 75
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ K ++ G VE K+A
Sbjct: 76 M-KARPHKVDGRVVEPKRA 93
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 45 MRDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVE-----PKRAVSREDSNRPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F QFG ++ IM D +T + RGF F+TFD +VD
Sbjct: 100 HITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVD 159
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + EV+KA K+
Sbjct: 160 RIVIQKYHT-INSHNCEVRKALTKQ 183
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD ++ RSRGFGF+T+ + Q VD
Sbjct: 11 QLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEVDAA 70
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 71 MSARPHKVD--GRVVEPKRA 88
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 49 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ E++ + +F +G + I+ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 169 RNH-QIRGKHVDVKKA 183
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F ++G++ + +M+D T RSRGFGFIT+ VDD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 76 NARPHKVD--GRVVEPKRAVPRQ 96
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIIIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 99 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 153
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 154 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 213
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 214 KIVIQKYHT-VNGHNCEVRKALSKQ 237
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 65 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 124
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 125 MNARPHKVD--GRVVEPKRA 142
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 103 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 157
Query: 62 GGI-PSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
GG+ P S E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 158 GGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFH 217
Query: 121 LELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 218 T-VSGSKCEIKVAQPKE 233
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 130 -KEHRLDGRVIDPKKA 144
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVE-----PKRAVSREDSNRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F QFG ++ IM D +T + RGF F+TFD +VD
Sbjct: 101 HITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + EV+KA K+
Sbjct: 161 RIVIQKYHT-INSHNCEVRKALTKQ 184
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ + +V + + +K+F+GG+ ++ + F Q+G + + +MRD ++ RSRGFGF+
Sbjct: 1 MSRESVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFV 60
Query: 104 TFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 133
T+ + Q VD + A+ +K++ G VE K+A
Sbjct: 61 TYSSVQEVDAAMSARPHKVD--GRVVEPKRA 89
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 109 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 163
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FITF E V +L K
Sbjct: 164 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHT 223
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 224 -VSGSKCEIKVAQPKE 238
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 136 -KEHRLDGRVIDPKKA 150
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 131 -KEHRLDGRVIDPKKA 145
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGFVTYA VD + H ++G+ VE KR + + D K
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVK 105
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +D+F Q+G ++ +IM D + + R F F+TFD +VD ++ +
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQ 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 166 KYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + V D
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV-DAAV 72
Query: 117 KGNKLELAGAQVEVKKA 133
+ G VE K+A
Sbjct: 73 NARPHNVDGRVVEPKRA 89
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGFVTYA VD + H ++G+ VE KR I + D K
Sbjct: 47 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAISREDSQRPDAHLTVK 106
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E + +F Q+G ++ +IM D + + RGF F+TFD +VD ++ +
Sbjct: 107 KIFVGGIKEDTEEHHLRGYFEQYGKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKIIIQ 166
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 167 KYHT-VNGHICEVRKALSKQ 185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 13 QLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 72
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 73 MNARPHKVD--GRVVEPKRA 90
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKGSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKAPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 16/146 (10%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M++ + RGFGFVTY+ VD+ ++ H ++G+ VE PK AV +D
Sbjct: 45 MREPACKRSRGFGFVTYSCLREVDEAMKARPHKVDGRVVE-----PKRAVSREDSNKPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI ED+ +D+F ++G ++ IM + S+ + RGF F+TFD VD
Sbjct: 100 HLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVD 159
Query: 113 DLLA-KGNKLELAGAQVEVKKAEPKK 137
++A K + + L EV+KA K+
Sbjct: 160 KIVAQKYHTINLHNC--EVRKALSKQ 183
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F ++G + + +MR+ + RSRGFGF+T+ + VD+
Sbjct: 11 QLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEA 70
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ K ++ G VE K+A
Sbjct: 71 M-KARPHKVDGRVVEPKRA 88
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGFVTYA VD + H ++G+ VE KR + + D K
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVK 105
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +D+F Q+G ++ +IM D + + R F F+TFD +VD ++ +
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQ 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 166 KYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + V D
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV-DAAV 72
Query: 117 KGNKLELAGAQVEVKKA 133
+ G VE K+A
Sbjct: 73 NARPHNVDGRVVEPKRA 89
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGF FVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFEFVTYAAVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + +MRD +T RSRGF F+T+ + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKV-IEDTHIINGKQVEIKRTIPKGAVGSKDFKT--K 57
MKD KT + RGFGFVTYA +VD+ H ++G++VE KR +P+ +G + + K
Sbjct: 76 MKDPKTRKSRGFGFVTYARAFMVDEAQAARPHRVDGREVEPKRAVPRDLIGKPEASSTVK 135
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ V E++ + +F FG + ++ + T++ RGF F+ FD VD ++
Sbjct: 136 KLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKVVLI 195
Query: 118 GNKLELAGAQVEVKKA 133
+ + G ++VKKA
Sbjct: 196 RDHT-VKGRHLDVKKA 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ ++ K F Q+G + + +M+D T +SRGFGF+T+ VD+ A
Sbjct: 44 RKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARAFMVDEAQA 103
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ G +VE K+A P+
Sbjct: 104 -ARPHRVDGREVEPKRAVPR 122
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 131 -KEHRLDGRVIDPKKA 145
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FIT+ E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 131 -KEHRLDGRVIDPKKA 145
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGF FVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHSCEVRKALSKQ 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGF F+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|348535473|ref|XP_003455225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 332
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D++TG+ RGFGF+ + D + V+KV+E H ++G+Q++ PK A+ K KKIFV
Sbjct: 108 DQQTGRSRGFGFILFKDAASVEKVLEQKEHRLDGRQID-----PKKAMAMKKDPVKKIFV 162
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++ +++F FG+++ ++ +D T + RGF FIT+ E V ++ K
Sbjct: 163 GGLNPDTSKEVIEEYFGTFGEIETIELPQDPKTEKRRGFVFITYKEEAPVKKVMEKKYH- 221
Query: 122 ELAGAQVEVKKAEPKKPNLPQ 142
+ G++ E+K A+PK+ L Q
Sbjct: 222 NVGGSKCEIKIAQPKEVYLQQ 242
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D T RSRGFGFI F +V+ +L +
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVEKVLEQ 134
Query: 118 GNKLELAGAQVEVKKA 133
+ L G Q++ KKA
Sbjct: 135 -KEHRLDGRQIDPKKA 149
>gi|47214179|emb|CAF96980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+K+++ G+ R FGF+TY+ P D + + H+++G VE+KR + + + + K
Sbjct: 290 VKNKELGRSRCFGFITYSTPEEADSAMAASPHVVDGHNVELKRAVARQDADNPEVLANVK 349
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLA 116
KIFVGG+ V + D+F QFG V++ +I+ D T + RGFGF+ F DT+ A +L
Sbjct: 350 KIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLT 409
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + ++G +VE KKA K+
Sbjct: 410 RYHT--ISGNKVEAKKAMTKQ 428
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTKKI 59
+++ + R FGFVTY+ P D + H ++G VE+KR + + G + K KKI
Sbjct: 39 NKQVQRSRCFGFVTYSTPEEADSAMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKI 98
Query: 60 FVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKG 118
FVGG+ E+ + F QFG++++ +++ D T + RGFGF+ F D + A ++ K
Sbjct: 99 FVGGLKDDTEENHLTEHFSQFGEIEKAEVISDKETGKKRGFGFVYFVDQDSADKSVVIKF 158
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ + G +VEVKKA K+
Sbjct: 159 HTIN--GHKVEVKKALTKQ 175
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++D + F QFG + + ++ + RSR FGF+T+ T + D +A
Sbjct: 6 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSTPEEADSAMA- 64
Query: 118 GNKLELAGAQVEVKKA 133
+ G VEVK+A
Sbjct: 65 ARPHTVDGNPVEVKRA 80
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDK-VIEDTHIINGKQVEIKRTIPKGAVGS 51
+ D++TG+ RGFGFV + D DK V+ H ING +VE+K+ + K + +
Sbjct: 128 ISDKETGKKRGFGFVYFVDQDSADKSVVIKFHTINGHKVEVKKALTKQELQA 179
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFV YA VD + +H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVRYAAVEEVDAAMNARSHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIF+GGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFIGGIKEDTEEHHLRDYFEQYGKIEMIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+ + + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARSHKVD--GRVVEPKRA 89
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|392569058|gb|EIW62232.1| hypothetical protein TRAVEDRAFT_117197 [Trametes versicolor
FP-101664 SS1]
Length = 330
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 7/134 (5%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
M+D G+ R F F+T+ DP+ V+ V+ H ++GK ++ KR IP+ + + K+F
Sbjct: 31 MRD-AAGRSRCFAFLTFEDPASVNAVMVREHFLDGKIIDPKRAIPR----QEHQRATKLF 85
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
+GG+P SV + +++F QFG V + +M D T RS+GFGF++F+ V +L GN
Sbjct: 86 IGGLPGSVTSESMREYFSQFGKVVDATVMLDRETGRSKGFGFVSFENVD-VQPMLGFGN- 143
Query: 121 LELAGAQVEVKKAE 134
L++ G + +++
Sbjct: 144 LQIDGKLLAQPRSQ 157
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + +F QFG V+ IMRD + RSR F F+TF+ +V+ ++ +
Sbjct: 1 MFIGGLNWDTTDESLRKYFTQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVRE 59
Query: 119 NKLELAGAQVEVKKAEPKK 137
+ L+ G ++ K+A P++
Sbjct: 60 HFLD--GKIIDPKRAIPRQ 76
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D++TG+ RGFGF+ + + VDKV+E H ++G+Q++ PK A+ K KKIFV
Sbjct: 115 DQQTGRSRGFGFILFKEAVSVDKVLEQKEHRLDGRQID-----PKKAMAMKKEPVKKIFV 169
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++ +++F FG+++ ++ +D T + RGF FIT+ E V +L K
Sbjct: 170 GGLNPDTDKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFH- 228
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 229 NVSGSKCEIKIAQPKE 244
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D T RSRGFGFI F +VD +L +
Sbjct: 82 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAVSVDKVLEQ 141
Query: 118 GNKLELAGAQVEVKKA 133
+ L G Q++ KKA
Sbjct: 142 -KEHRLDGRQIDPKKA 156
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
+D KT + RGF F+TY D + V KV+E H ++G + EIK PK
Sbjct: 198 QDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPK 243
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFG VTYA VD + H ++G+ VE PK AV +D
Sbjct: 45 MRDPNTKRSRGFGLVTYATVEEVDAAMNARPHKVDGRAVE-----PKRAVSREDSQRPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 100 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 159
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 160 KIVIQKYHT-VNGHNCEVRKALSKQ 183
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFG +T+ T + VD + A
Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEVDAAMNA 73
Query: 117 KGNKLELAGAQVEVKKA 133
+ +K++ G VE K+A
Sbjct: 74 RPHKVD--GRAVEPKRA 88
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDF--KTK 57
MKD KT + RGFGF+TY+ +VD H ++G+ VE KR +P+ +G + K
Sbjct: 49 MKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ED+ + +F +G++ I+ D T + RGFGF+ FD VD + +
Sbjct: 109 KLFVGGLKDDHEEDDLRVYFQGYGNINSVSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 118 GNKLELAGAQVEVKKA 133
N ++ G V+VKKA
Sbjct: 169 RNH-QIRGKHVDVKKA 183
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+F+GG+ +D K F Q+GD+ + +M+D T RSRGFGFIT+ VDD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Query: 116 -AKGNKLELAGAQVEVKKAEPKK 137
A+ ++++ G VE K+A P++
Sbjct: 76 NARPHRVD--GRVVEPKRAVPRQ 96
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 179 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 234
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL N+
Sbjct: 235 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE--NRY 292
Query: 122 ELAGA-QVEVKKAEPKK 137
G+ + E+K A+PK+
Sbjct: 293 HQIGSGKCEIKVAQPKE 309
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 146 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 205
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 206 KEHKLD--GKLIDPKRAK 221
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + + + VDKV++ H ++G+ ++ PK A+ K KKIFV
Sbjct: 131 DPNTGRSRGFGFILFKESASVDKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 185
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 186 GGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFH- 244
Query: 122 ELAGAQVEVKKAEPKK 137
+ G++ E+K A+PK+
Sbjct: 245 NVGGSKCEIKVAQPKE 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 98 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQ 157
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 158 -KEHRLDGRVIDPKKA 172
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYAD-PSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T RGFGFVTYA VV + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKCSRGFGFVTYATVEEVVAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT-EQAVDD 113
+ +K+F+GG+ ++ + F Q+G + + +MRD +T SRGFGF+T+ T E+ V
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVVAA 71
Query: 114 LLAKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVE-----PKRAVSREDSNRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F QFG ++ IM D +T + RGF F+TFD +VD
Sbjct: 101 HITVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + EV+KA K+
Sbjct: 161 RIVIQKYHT-INSHNCEVRKALTKQ 184
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 44 IPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 103
+ + +V + + +K+F+GG+ ++ + F Q+G + + +MRD ++ RSRGFGF+
Sbjct: 1 MSRESVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFV 60
Query: 104 TFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 133
T+ + Q VD + A+ +K++ G VE K+A
Sbjct: 61 TYSSVQEVDAAMSARPHKVD--GRVVEPKRA 89
>gi|219521089|gb|AAI72047.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521464|gb|AAI72049.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521466|gb|AAI72057.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521468|gb|AAI72058.1| Hnrnpa1l2 protein [Mus musculus]
Length = 275
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + R FGFVTY VD + H ++G+ VE KR + + + K
Sbjct: 1 MRDPNTKRSRCFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQIPGAHLTVK 60
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KI VGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ +
Sbjct: 61 KILVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRR 147
+ G EV+KA K+ S +R
Sbjct: 121 KYHT-VNGHNCEVRKALSKQEMASASSSQR 149
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 45 MRDPNNKRSRGFGFVTYSCVEEVDACMAARPHKVDGRVVE-----PKRAVSREDSNRPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI ED +++F +G ++ IM + +T + RGF F++FD VD
Sbjct: 100 HLTVKKIFVGGIKEDTREDHIREYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVD 159
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++A+ + EV+KA PK+
Sbjct: 160 KIVAQKYHT-INSHNCEVRKALPKQ 183
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F Q+G++ + +MRD + RSRGFGF+T+ + VD
Sbjct: 11 QLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEVDAC 70
Query: 115 LAKGNKLELAGAQVEVKKA 133
+A ++ G VE K+A
Sbjct: 71 MA-ARPHKVDGRVVEPKRA 88
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV++ H ++G+ ++ PK A+ K KKIFV
Sbjct: 109 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 163
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FITF E V +L K
Sbjct: 164 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHT 223
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 224 -VSGSKCEIKVAQPKE 238
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 136 -KEHRLDGRVIDPKKA 150
>gi|119597384|gb|EAW76978.1| hCG2023776 [Homo sapiens]
Length = 317
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGS--KDFKTK 57
M+D T RGFGFVTYA VD + H ++G+ VE KR + + K
Sbjct: 46 MRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVDGRVVESKRAVSREDSQRPGAHLTVK 105
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ +
Sbjct: 106 KIFVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 166 KYHT-VNGHICEVRKALSKQ 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + + F Q+G + + +MRD +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTNESLRSHFEQWGTLMDCVVMRDPNTKCSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVESKRA 89
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGG+ E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 88 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 142
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 143 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 202
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 203 -ISGSKCEIKVAQPKE 217
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L
Sbjct: 54 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 113
Query: 117 KGNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 114 QKEH-RLDGRVIDPKKA 129
>gi|441642329|ref|XP_004090435.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Nomascus leucogenys]
Length = 503
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD----FK 55
M+D T + RGFGFVTYA VD + H ++G+ VE KR + + GS+
Sbjct: 233 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRAVEPKRAVSRE--GSQRPGACLT 290
Query: 56 TKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL 115
+K+FV GI E +D+F Q+G ++ +IM D + + +GF FI+F + ++D ++
Sbjct: 291 MEKVFVAGIKEDTEEHHLRDYFEQYGKIEVIKIMTDXGSGKKKGFAFISFGDDDSMDKIV 350
Query: 116 AKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGG 175
+ E G EV+KA PK+ +R + +G G GD + G G GG
Sbjct: 351 IQKYHRE-NGHNCEVRKALPKQEVHSASPSQRGXSGSGNFGGGCGDCFSGNGNFD-CGGN 408
Query: 176 FGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYG 217
F G GG G GY S G GY G+G G F G G Y
Sbjct: 409 FSGHGGSCGHSGYSGS------GDGYNGFGDGSNFEGGGSYN 444
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 26 VIEDTHI-----INGKQVEIKRTI---PKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFF 77
+I++ H+ K+ ++ +++ P + + +++F G + + ++ +
Sbjct: 162 IIQELHVGCDVLSTAKEEKLLKSLFPPPPSCLNRSPKEPEQLFTGRLSFEMTDERLRSRS 221
Query: 78 MQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 133
Q G + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 222 EQRGTLTGCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRAVEPKRA 276
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 95 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 149
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 150 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 209
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 210 -VSGSKCEIKVAQPKE 224
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 62 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 121
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 122 KEH-RLDGRVIDPKKA 136
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|321459101|gb|EFX70158.1| hypothetical protein DAPPUDRAFT_189289 [Daphnia pulex]
Length = 334
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D +TG+ RGF F+ + +DKV+ HIINGK+V+ PK A ++ KIFV
Sbjct: 102 DPQTGRSRGFAFLVFKSAENLDKVMNAGEHIINGKRVD-----PKKAKA----RSGKIFV 152
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+P E+ + FF FG++ E ++ D ++ + F FIT+D E V DLL K K
Sbjct: 153 GGLPQDTTEETIRSFFGTFGNIVEIEMPFDRVKNQRKNFCFITYDNENVVFDLL-KTPKQ 211
Query: 122 ELAGAQVEVKKAEPK 136
+ G +V+VKKA PK
Sbjct: 212 VINGKEVDVKKATPK 226
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + + E ++ F ++G+++ + D T RSRGF F+ F + + +D ++
Sbjct: 68 RKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENLDKVMN 127
Query: 117 KGNKLELAGAQVEVKKAEPK 136
G + + G +V+ KKA+ +
Sbjct: 128 AGEHI-INGKRVDPKKAKAR 146
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 85 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 140
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 141 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 199
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 200 QIGSGKCEIKVAQPKE 215
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K +KL+ G ++ K+A+ K
Sbjct: 112 KEHKLD--GKLIDPKRAKALK 130
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD ++D
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 102 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 156
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FITF E V +L K
Sbjct: 157 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHT 216
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 217 -VSGSKCEIKVAQPKE 231
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 129 KEH-RLDGRVIDPKKA 143
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRQGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + R F F+TFD VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL- 115
+K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 116 AKGNKLELAGAQVEVKKA 133
A+ +K++ G VE K+A
Sbjct: 74 ARPHKVD--GRVVEPKRA 89
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 11/135 (8%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGF F+ + D + +D+V H INGK+V+ PK A + KIFV
Sbjct: 84 DSMTGRSRGFAFIVFQDAASIDRVSAAGEHTINGKKVD-----PKKAKA----RHGKIFV 134
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GGI +++D+ ++F Q+G + E ++ D ++ +GF FITF++EQ V DLL + ++
Sbjct: 135 GGISPELSDDDINEYFGQYGTIMEVEMPFDKQKNQRKGFCFITFESEQVVADLLKRPKQV 194
Query: 122 ELAGAQVEVKKAEPK 136
+ +V+VKKA PK
Sbjct: 195 -IKDKEVDVKKATPK 208
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ + E +++F ++G+++ + D T RSRGF FI F ++D + A
Sbjct: 50 RKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRVSA 109
Query: 117 KGNKLELAGAQVEVKKAEPK 136
G + G +V+ KKA+ +
Sbjct: 110 AGEHT-INGKKVDPKKAKAR 128
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + RGFGFV+++ S VD + + HII+GK V+ KR +P+ + +K
Sbjct: 61 MRDPATKRSRGFGFVSFSKQSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSK 120
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED FK+ F ++G++ + +I+ D +T + RGF FITFD AVD +
Sbjct: 121 RLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLI 180
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + + + +VKKA K+
Sbjct: 181 KSHM-INNYRCDVKKALSKE 199
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ SS ++ K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A
Sbjct: 29 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMA 88
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G V+ K+A P++
Sbjct: 89 NRPHI-IDGKTVDPKRAVPRE 108
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 120 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 174
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 175 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 234
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 235 -ISGSKCEIKVAQPKE 249
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 87 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 146
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 147 KEH-RLDGRVIDPKKA 161
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + + + VDKV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKESASVDKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ED+ +++F FG+++ ++ D T++ RGF FITF E V +L K
Sbjct: 88 GGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFH- 146
Query: 122 ELAGAQVEVKKAEPKK 137
+ G++ E+K A+PK+
Sbjct: 147 NVGGSKCEIKVAQPKE 162
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +VD +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRVIDPKKA 74
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 16/190 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFK--TK 57
M+D T + RGFGFVT+ +VD + + H ++G++VE KR + + K
Sbjct: 44 MQDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDGREVEAKRAVSREESHRPGIHKSVK 103
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++F+GGI +V ++ ++F ++G V+ ++++D ++ + RGFGF+ FD VD ++
Sbjct: 104 RMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQT 163
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+ ++G +EV KA K+ + + NN + Y GY +AGG G
Sbjct: 164 RRHV-ISGVSIEVSKAFSKEDQTRKAGF--VNN----------NGYYGYDAFAWAGGFRG 210
Query: 178 GSGGGGGGGG 187
GS GG G
Sbjct: 211 GSHNSRGGNG 220
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
V + + +K+F+GG+ + ED +FF ++G + + +M+D +T RSRGFGF+TF+
Sbjct: 4 VNEEPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKA 63
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKA 133
Q VDD ++ +L G +VE K+A
Sbjct: 64 QMVDDCMS-NRPHKLDGREVEAKRA 87
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 131 -KEHRLDGRVIDPKKA 145
>gi|431892736|gb|ELK03169.1| Heterogeneous nuclear ribonucleoprotein A/B [Pteropus alecto]
Length = 230
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 2 DPNTGRSRGFGFILFKDSASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 56
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 57 GGLNPEATEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 116
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 117 -ISGSKCEIKVAQPKE 131
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D +T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 181 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE-----PKRAVSREDSVKPGA 235
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F ++G ++ ++M D + + RGF F+TFD VD
Sbjct: 236 HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 295
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EVKKA K+
Sbjct: 296 KIVVQKYHT-INGHNCEVKKALSKQ 319
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-D 113
+ +K+F+GG+ +D ++ F ++G + + +MRD T RSRGFGF+T+ + VD
Sbjct: 147 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 206
Query: 114 LLAKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 207 MCARPHKVD--GRVVEPKRA 224
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 78 DPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 132
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E V +L K
Sbjct: 133 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVKKVLEKKFHT 192
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 193 -ISGSKCEIKVAQPKE 207
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 104
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 105 KEH-RLDGRVIDPKKA 119
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 88 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 147
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 148 -ISGSKCEIKVAQPKE 162
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRVIDPKKA 74
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 34 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D +++ RGF FITF E+ V +L K
Sbjct: 89 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 148
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 149 -ISGSKCEIKVAQPKE 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 KEH-RLDGRVIDPKKA 75
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K +KL+ G ++ K+A+ K
Sbjct: 209 KEHKLD--GKLIDPKRAKALK 227
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGS--KDFKTK 57
M+D + + RGFGFVT++ + VD + H I+G+ VE KR + + G K
Sbjct: 49 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVK 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI E +D+F ++G + +I+ D + + RGFGF+TFD VD ++ +
Sbjct: 109 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 168
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA ++
Sbjct: 169 KYHT-INGHNAEVRKALSRQ 187
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 44 IPKGAVGSKDFKTK----KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRG 99
+P+G S D++ K K+F+GG+ E+ + ++ Q+G + + +MRD ++ RSRG
Sbjct: 1 MPRGDRES-DWREKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRG 59
Query: 100 FGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 133
FGF+TF + VD +A + G VE K+A
Sbjct: 60 FGFVTFSSMAEVDAAMA-ARPHTIDGRVVEPKRA 92
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + RGFGFVTYA + VD +E H ++G+ VE PK AV +D
Sbjct: 45 MRDPANKRSRGFGFVTYAGVNEVDAAMEARPHKVDGRLVE-----PKRAVSREDSSRPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI + +D+F QFG ++ IM D ++ + RGF F+TFD AVD
Sbjct: 100 HVTVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVD 159
Query: 113 DLLAKGNKLELAGAQVEVKKA 133
++ + L G EV+KA
Sbjct: 160 RIVIQKYHT-LNGHNCEVRKA 179
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD + RSRGFGF+T+ VD
Sbjct: 11 QLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVNEVDAA 70
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 71 MEARPHKVD--GRLVEPKRA 88
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + RGFGFV+Y+ S VD+ + + H+I+GK V+ KR +P+ + +K
Sbjct: 53 MRDPTTKRSRGFGFVSYSKQSEVDEAMANRPHVIDGKTVDPKRAVPREQSQRSEANISSK 112
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ E FKD F ++G++ + +I+ D +T + RGF F+TFD AVD +
Sbjct: 113 RLYVSGVREDHTEQMFKDHFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCILI 172
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + + A+ +VKKA K+
Sbjct: 173 KSHM-INNARCDVKKALSKE 191
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ S+ ++ ++F+ ++G++ + +MRD +T RSRGFGF+++ + VD+ +A
Sbjct: 21 RKMFIGGLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVDEAMA 80
Query: 117 KGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNN--PKPAYGSG---------FGDAYGG 165
+ + G V+ K+A P+ + S R N K Y SG F D +G
Sbjct: 81 NRPHV-IDGKTVDPKRAVPR-----EQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGK 134
Query: 166 YGG 168
YG
Sbjct: 135 YGN 137
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + RGFGFV+++ S VD + H+I+GK V+ KR +P+ A + +K
Sbjct: 31 MRDPATKRSRGFGFVSFSKQSEVDAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSK 90
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ E F+D+F QFG V + +I+ D +T + RGF FI+FD VD + +
Sbjct: 91 RLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQ 150
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++ + +VKKA K+
Sbjct: 151 KSH-QIHNYRCDVKKALSKE 169
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ ++ K+F+ Q+G++ + +MRD +T RSRGFGF++F + VD +A
Sbjct: 1 MFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVDAAMAAR 60
Query: 119 NKLELAGAQVEVKKAEPK 136
+ + G V+ K+A P+
Sbjct: 61 PHV-IDGKTVDPKRAVPR 77
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ ++D H I+G+ VE KR +P+ + + + K
Sbjct: 56 MKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVK 115
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F FG + I+ D T + RGF FI FD VD ++ +
Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 175
Query: 118 GNKLELAGAQVEVKKAEPKK 137
N + ++VKKA K+
Sbjct: 176 KNHT-IKNKSLDVKKAIAKQ 194
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ +D K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 22 QLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81
Query: 115 L-AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 82 QNARPHKID--GRTVEPKRAVPRQ 103
>gi|47550715|ref|NP_999871.1| heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]
gi|42542945|gb|AAH66434.1| Heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
Length = 314
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDF--KTK 57
+++ + + R FGFVTY+ D + H+++GK VE+KR + + G + K K
Sbjct: 40 VQNDQLQRSRCFGFVTYSTSEEADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVK 99
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGG+ + E + +FF QFG +++ +++ D T + RGFGF+ F+ + D +
Sbjct: 100 KIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVL 159
Query: 118 GNKLELAGAQVEVKKAEPKKP 138
+ + G +VEVKKA K+
Sbjct: 160 KFHM-INGHKVEVKKALTKQE 179
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
K K+FVGG+ D + +F QFG++ + ++++ RSR FGF+T+ T + D
Sbjct: 6 KLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADAA 65
Query: 115 LAKGNKLELAGAQVEVKKA 133
+A + + G VEVK+A
Sbjct: 66 MAARPHV-VDGKNVEVKRA 83
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYTTVEEVDAAMNARPHKVDGRAVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G +V+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCQVRKALSKQ 184
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A
Sbjct: 15 KLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAMNA 74
Query: 117 KGNKLELAGAQVEVKKA 133
+ +K++ G VE K+A
Sbjct: 75 RPHKVD--GRAVEPKRA 89
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 41 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 95
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 96 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 155
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 156 KIVIQKYHT-VNGHNCEVRKALSKQ 179
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 7 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 66
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 67 MNARPHKVD--GRVVEPKRA 84
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGS--KDFKTK 57
M+D T + RGFGFVTYA VD + H ++G+ E+KR + + K
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDVAMNARPHKVDGRVGELKRAVSREDSQRPGAHLTVK 105
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ +
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 165
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ G EV+KA K+
Sbjct: 166 KYHT-VNGHNCEVRKALSKQ 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDVA 71
Query: 115 L-AKGNKL-----ELAGAQVEVKKAEPKKP 138
+ A+ +K+ EL A V + + ++P
Sbjct: 72 MNARPHKVDGRVGELKRA---VSREDSQRP 98
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 177 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 232
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 233 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 291
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 292 QIGSGKCEIKVAQPKE 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 144 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 203
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 204 KEHKLD--GKLIDPKRAK 219
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 166 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 221
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 222 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 280
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 281 QIGSGKCEIKVAQPKE 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA- 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 133 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 192
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K +KL+ G ++ K+A+ K
Sbjct: 193 KEHKLD--GKLIDPKRAKALK 211
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKD------ 53
MKD+ TG RGFGFV ++D V KV+++ H ++ K+++ K PKG K
Sbjct: 41 MKDKVTGFSRGFGFVKFSDQQSVSKVLKNGPHSLDNKKIDPKPCTPKGIQQEKKSAAMEH 100
Query: 54 FKTKKIFVGGIPSSVNEDEFKDFFMQ-FGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
++ KIF+GGI S ++ K +F + FG V E + + +R +GFGF+TF EQAV+
Sbjct: 101 TQSHKIFIGGIAQSSTTEDVKKYFEEGFGTVNEVVFVINKEDNRHKGFGFVTFANEQAVN 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKKPNLPQ 142
+ + E+ Q+E K+A P++ P+
Sbjct: 161 KAV-DMHFHEIGDKQIEAKRATPREKMPPR 189
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
KIF+GG+ +D + +F FG+V E +M+D T SRGFGF+ F +Q+V +L
Sbjct: 10 KIFIGGLARQTEDDGLRAYFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSKVLKN 69
Query: 118 GNKLELAGAQVEVKKAEPK 136
G L +++ K PK
Sbjct: 70 G-PHSLDNKKIDPKPCTPK 87
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 88 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 147
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 148 -ISGSKCEIKVAQPKE 162
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRVIDPKKA 74
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 34 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 89 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 148
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 149 -ISGSKCEIKVAQPKE 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 KEH-RLDGRVIDPKKA 75
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGG+ E +D F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 182 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 237
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 238 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 296
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 297 QIGSGKCEIKVAQPKE 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-A 116
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +L
Sbjct: 149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208
Query: 117 KGNKLELAGAQVEVKKAE 134
K +KL+ G ++ K+A+
Sbjct: 209 KEHKLD--GKLIDPKRAK 224
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -ISGSKCEIKVAQPKE 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ ++D + H I+G+ VE KR +P+ + + + K
Sbjct: 56 MKDPKTKRSRGFGFITYSQSYMIDNAQDARPHKIDGRTVEPKRAVPRQEIDAPNAGATVK 115
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F FG + I+ D T + RGF FI FD VD ++ +
Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 175
Query: 118 GNKLELAGAQVEVKKAEPKK 137
N + ++VKKA K+
Sbjct: 176 KNHT-IKNKSLDVKKAIAKQ 194
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 22 QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81
Query: 115 L-AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 82 QDARPHKID--GRTVEPKRAVPRQ 103
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVG I E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D +T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 59 MRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVDGRVVE-----PKRAVSREDSARPGA 113
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F +G ++ ++M D + + RGF F+TFD VD
Sbjct: 114 HLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 173
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EVKKA K+
Sbjct: 174 KIVVQKYHT-INGHNCEVKKALSKQ 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ +D ++ F Q+G + + +MRD T RSRGFGF+T+ + VD
Sbjct: 25 QLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 84
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 85 MSARPHKVD--GRVVEPKRA 102
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ + + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY VD I H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYTTVEEVDAAINARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
F KK FVG I E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HFTVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KTVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+ G+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 INARPHKVD--GRVVEPKRA 89
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 14/140 (10%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI--EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIF 60
D +TG+ RGF F+ + P +DKV+ ED H INGK+V+ PK A + K F
Sbjct: 39 DPQTGRSRGFAFIIFKSPESIDKVVAFED-HTINGKKVD-----PKKAKA----RQGKTF 88
Query: 61 VGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK 120
VGG+ +++E K FF Q+G+V E + D ++ +GF FIT+D+E V +LL K K
Sbjct: 89 VGGLSPETSDEEIKTFFEQYGNVVEMETPFDKMKNQRKGFCFITYDSEAVVTELL-KTPK 147
Query: 121 LELAGAQVEVKKAEPKKPNL 140
+ G +V+VK+A KP++
Sbjct: 148 QMVGGKEVDVKRATA-KPDM 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ E + ++ F Q+G+++ I D T RSRGF FI F + +++D ++A
Sbjct: 5 RKLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKVVA 64
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G +V+ KKA+ ++
Sbjct: 65 FEDHT-INGKKVDPKKAKARQ 84
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D +T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 111 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE-----PKRAVSREDSVKPGA 165
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F ++G ++ ++M D + + RGF F+TFD VD
Sbjct: 166 HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 225
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EVKKA K+
Sbjct: 226 KIVVQKYHT-INGHNCEVKKALSKQ 249
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-D 113
+ +K+F+GG+ +D ++ F ++G + + +MRD T RSRGFGF+T+ + VD
Sbjct: 77 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 136
Query: 114 LLAKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 137 MCARPHKVD--GRVVEPKRA 154
>gi|115532848|ref|NP_001040944.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
gi|351063092|emb|CCD71136.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
Length = 308
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGFVT++ + VD ++ HII+GK V+ KR +P+ + TK
Sbjct: 17 MRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTK 76
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED ++F ++G V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 137 KSHM-VNGHRCDVRK 150
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+ K+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDPKR 59
Query: 133 AEPK 136
A P+
Sbjct: 60 AVPR 63
>gi|71988518|ref|NP_001023199.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
gi|351063091|emb|CCD71135.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
Length = 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGFGFVT++ + VD ++ HII+GK V+ KR +P+ + TK
Sbjct: 17 MRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTK 76
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED ++F ++G V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 137 KSHM-VNGHRCDVRK 150
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 73 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 132
++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+ K+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDPKR 59
Query: 133 AEPK 136
A P+
Sbjct: 60 AVPR 63
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 88 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 147
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 148 -VSGSKCEIKVAQPKE 162
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRVIDPKKA 74
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY VD I H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYTTVEEVDAAINARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
F KK FVG I + E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HFTVKKTFVGSIKEDMEEHHLRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KTVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+ G+ ++ + F Q+ + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIRGMSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 INARPHKVD--GRVVEPKRA 89
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARAHKVDGRVVE-----PKRAVLREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVTKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KIAIQKYHT-VNGHNCEVRKALSKQ 184
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+ A+ +K V+ + EPK+ L + S R
Sbjct: 72 MNARAHK-------VDGRVVEPKRAVLREDSQR 97
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVG--SKDFKTK 57
M+D T + RGFGFVT++ + VD ++ HII+GK V+ KR +P+ + TK
Sbjct: 55 MRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTK 114
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED ++F ++G V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 175 KSHM-VNGHRCDVRK 188
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+ S+ +D ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G V+ K+A P+
Sbjct: 83 QRPHI-IDGKTVDPKRAVPR 101
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVG--SKDFKTK 57
M+D T + RGFGFVT++ + VD ++ HII+GK V+ KR +P+ + TK
Sbjct: 55 MRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTK 114
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED ++F ++G V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 175 KSHM-VNGHRCDVRK 188
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+ S+ +D ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G V+ K+A P+
Sbjct: 83 QRPHI-IDGKTVDPKRAVPR 101
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGF FVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVDGRVVE-----PKTAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KTVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + MRD +T RSRGF F+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVEEVDAA 71
Query: 115 L-AKGNKLE--LAGAQVEVKKAEPKKP 138
+ A+ +K++ + + V + + ++P
Sbjct: 72 MNARPHKVDGRVVEPKTAVSREDSQRP 98
>gi|260304980|ref|NP_001159443.1| predicted gene 5803 [Mus musculus]
gi|148676975|gb|EDL08922.1| mCG112810 [Mus musculus]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++GK VE PK A+ +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGKVVE-----PKRAISRQDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + R F F+TFD +VD
Sbjct: 101 HLIVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 TIVIQKYH-NVNGHNCEVRKALSKQ 184
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GKVVEPKRA 89
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + V+KV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 33 DPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 89 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 147
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 148 QIGSGKCEIKVAQPKE 163
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +V+ +
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV---- 56
Query: 119 NKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 57 --LELKEHKLDGKLIDPKR 73
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVGEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KTVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T VD
Sbjct: 12 QLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 104 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 158
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F +FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 218
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 219 -VSGSKCEIKVAQPKE 233
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 131 KEH-RLDGRVIDPKKA 145
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 118 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 173
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 174 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 232
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 233 QIGSGKCEIKVAQPKE 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 85 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV--- 141
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 142 ---LELKEHKLDGKLIDPKR 158
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 9/137 (6%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D+ TG+ RGFGF+ + DP+ V+KV+E H ++G+ ++ PK A+ K KK+FV
Sbjct: 98 DQGTGRSRGFGFILFKDPASVEKVLEQKEHKLDGRVID-----PKRALAMKKEPVKKVFV 152
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++ ++F FG+++ ++ +D T + RGF FIT+ E V L NK
Sbjct: 153 GGLNPDTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKALE--NKF 210
Query: 122 ELA-GAQVEVKKAEPKK 137
G++ E+K A+PK+
Sbjct: 211 HTVGGSKCEIKIAQPKE 227
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D T RSRGFGFI F +V+ +L +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 124
Query: 118 GNKLELAGAQVEVKKA 133
+ +L G ++ K+A
Sbjct: 125 -KEHKLDGRVIDPKRA 139
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
+D KT + RGF F+TY + + V K +E+ H + G + EIK PK
Sbjct: 181 QDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIAQPK 226
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 33 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 89 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 147
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 148 QIGSGKCEIKVAQPKE 163
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV---- 56
Query: 119 NKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 57 --LELKEHKLDGKLIDPKR 73
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 16/190 (8%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFK--TK 57
M+D T + RGFGFVT+ +VD + + H ++G++VE KR + + K
Sbjct: 44 MQDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDGREVEAKRAVSREESHRPGIHKSVK 103
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
++F+GGI +V ++ ++F ++G V+ ++++D ++ + RGFGF+ FD VD ++
Sbjct: 104 RMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQT 163
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFG 177
+ ++G +EV KA K+ + + NN + Y GY +AGG G
Sbjct: 164 RRHV-ISGVSIEVSKAFSKEDQTRKAGF--VNN----------NGYYGYDAFAWAGGFRG 210
Query: 178 GSGGGGGGGG 187
G+ GG G
Sbjct: 211 GNHNSRGGNG 220
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 49 VGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE 108
V + + +K+F+GG+ + ED +FF ++G + + +M+D +T RSRGFGF+TF+
Sbjct: 4 VNEEPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKA 63
Query: 109 QAVDDLLAKGNKLELAGAQVEVKKA 133
Q VDD ++ +L G +VE K+A
Sbjct: 64 QMVDDCMS-NRPHKLDGREVEAKRA 87
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV++ H ++G+ ++ PK A+ K KKIFV
Sbjct: 109 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 163
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FITF E V +L K
Sbjct: 164 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHT 223
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 224 -VSGSKCEIKVAQPKE 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 118 GNKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 136 KEH-RLDGRVIDPKKA 150
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPSA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYH-TVNGHNCEVRKALSKQ 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|149709520|ref|XP_001501077.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Equus caballus]
Length = 320
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVLREDSQRLGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KK+FVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKLFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
+ + + G EV+KA K+
Sbjct: 161 KSVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+ G+ ++ + Q + + +MRD +T SRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIRGLSFETTDESLRSHSEQRRTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+ A+ +K V+ + EPK+ L + S R
Sbjct: 72 MNARPHK-------VDGRVVEPKRAVLREDSQR 97
>gi|209155336|gb|ACI33900.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 348
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D++TG+ RGFGF+ + + + VDKV+E H ++G+Q++ PK A+ K KKIFV
Sbjct: 118 DQQTGRSRGFGFILFKEAAGVDKVLEQKEHRLDGRQID-----PKKAMAMKKEPVKKIFV 172
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ ++ +++F FG+++ ++ +D T + RGF FIT+ E V +L K
Sbjct: 173 GGLNPDTEKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFH- 231
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 232 NVSGSKCEIKIAQPKE 247
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ ++ + KD+F +FG+V + I D T RSRGFGFI F VD +L +
Sbjct: 85 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAAGVDKVLEQ 144
Query: 118 GNKLELAGAQVEVKKA 133
+ L G Q++ KKA
Sbjct: 145 -KEHRLDGRQIDPKKA 159
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK 46
+D KT + RGF F+TY D + V KV+E H ++G + EIK PK
Sbjct: 201 QDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPK 246
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + V+KV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 34 DPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 89
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 90 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 148
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 149 QIGSGKCEIKVAQPKE 164
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +V+ +
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV--- 57
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 58 ---LELKEHKLDGKLIDPKR 74
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 33 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 88
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 89 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 147
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 148 QIGSGKCEIKVAQPKE 163
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV---- 56
Query: 119 NKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 57 --LELKEHKLDGKLIDPKR 73
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + V+KV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 64 DPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 119
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 120 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 178
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 179 QIGSGKCEIKVAQPKE 194
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +V+ +
Sbjct: 31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV--- 87
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 88 ---LELKEHKLDGKLIDPKR 104
>gi|395849370|ref|XP_003797301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Otolemur garnettii]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
M+D T + RGF FVTY VD + H ++G+ VE KR + + +D K
Sbjct: 45 MRDPNTKRSRGFRFVTYVTVEEVDAAVNARPHKVDGRVVEPKRAVSREDSQRRDAHLTVK 104
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K FVGGI E + +F Q+G ++ +IM D + + RGF F+TFD +VD+++ +
Sbjct: 105 KFFVGGIKEDTEEHHLRAYFEQYGKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNIVIQ 164
Query: 118 GNKLELAGAQ-VEVKKAEPKKPNLPQPSYRR 147
K + EV+KA K+ S +R
Sbjct: 165 --KYDTVNCHNCEVRKALSKQEMASASSSQR 193
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ + E + Q+G + + +MRD +T RSRGF F+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFEMME-SLRSHSEQWGMLTDCVVMRDPNTKRSRGFRFVTYVTVEEVDAA 70
Query: 115 L-AKGNKLELAGAQVEVKKAEPKKPNLPQPSYRR 147
+ A+ +K V+ + EPK+ + S RR
Sbjct: 71 VNARPHK-------VDGRVVEPKRAVSREDSQRR 97
>gi|355558052|gb|EHH14832.1| hypothetical protein EGK_00819, partial [Macaca mulatta]
Length = 278
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
++D T + RGFGFVTYA VD V+ H ++G+ VE KR AV +D
Sbjct: 46 LRDPNTKRSRGFGFVTYATVQEVDAVMNARPHKVDGRAVETKR-----AVSGEDSQRPGG 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KK+FVGGI E D+F QFG ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL- 115
+K+F+GG+ ++ + Q+G + + ++RD +T RSRGFGF+T+ T Q VD ++
Sbjct: 14 RKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAVMN 73
Query: 116 AKGNKLELAGAQVEVKKA 133
A+ +K++ G VE K+A
Sbjct: 74 ARPHKVD--GRAVETKRA 89
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIF GGI E +D+F Q+G ++ +IM D + + RGF F+TFD ++D
Sbjct: 101 HLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 102 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 157
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 158 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 216
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 217 QIGSGKCEIKVAQPKE 232
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 69 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV--- 125
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 126 ---LELKEHKLDGKLIDPKR 142
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD +T + RGFGF+TY +P +VD + H I+GK VE KR +P+ S +
Sbjct: 49 MKDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVT 108
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLA 116
K+FVGG+ V +E +++F ++G++ E +++ + SRGFGF+TFD VD +L
Sbjct: 109 KLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILY 168
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
K + + ++ +VKKA K+
Sbjct: 169 KPH--HIGSSRADVKKALSKE 187
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AA 74
Query: 117 KGNK-LELAGAQVEVKKAEPKK 137
+ N+ E+ G VE K+A P++
Sbjct: 75 QANRPHEIDGKTVEAKRAMPRE 96
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ ++D H I+G+ VE KR +P+ + + + K
Sbjct: 57 MKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVK 116
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F +FG + I+ D T + RGF FI FD VD ++ +
Sbjct: 117 KLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 176
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++VKKA K+
Sbjct: 177 KTH-NIKNKTLDVKKAIAKQ 195
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 23 QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
Query: 115 L-AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 83 QNARPHKID--GRTVEPKRAVPRQ 104
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGF TYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFDTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|198285473|gb|ACH85275.1| heterogeneous nuclear ribonucleoprotein A/B-like [Salmo salar]
Length = 210
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D++TG+ RGFGF+ + + VDKV+E H ++G+Q++ PK A+ K KKIFV
Sbjct: 1 DQQTGRSRGFGFILFKEAVSVDKVLEQKEHRLDGRQID-----PKKAMAMKKEPVKKIFV 55
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +++ +++F FG+++ ++ +D T + RGF FIT+ E V +L K
Sbjct: 56 GGLNPDTDKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFH- 114
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 115 NVSGSKCEIKIAQPKE 130
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 2 KDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGA 48
+D KT + RGF F+TY D + V KV+E H ++G + EIK PK
Sbjct: 84 QDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPKEV 131
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D + + RGFGFVTY++ + VD ++ H ++G+ VE PK AV +D
Sbjct: 45 MRDPNSKRSRGFGFVTYSNVTEVDDAMKARPHKVDGRVVE-----PKRAVSREDSNKPGA 99
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +++F ++G ++ IM + ST + RGF F+TFD VD
Sbjct: 100 HLTVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVD 159
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++A+ + + EV+KA K+
Sbjct: 160 KIVAQKYHI-INFHNCEVRKALSKQ 183
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ E+ + F Q+G + + +MRD ++ RSRGFGF+T+ VDD
Sbjct: 11 QLRKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVTYSNVTEVDDA 70
Query: 115 LAKGNKLELAGAQVEVKKA 133
+ K ++ G VE K+A
Sbjct: 71 M-KARPHKVDGRVVEPKRA 88
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 71 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 126
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 127 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 185
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 186 QIGSGKCEIKVAQPKE 201
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 38 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV--- 94
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 95 ---LELKEHKLDGKLIDPKR 111
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 59 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 114
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 115 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 173
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 174 QIGSGKCEIKVAQPKE 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 26 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV--- 82
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 83 ---LELKEHKLDGKLIDPKR 99
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D VD+V+E T H ++GK ++ KR A+ K+ KK+FV
Sbjct: 64 DPLTGRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRA---KAIKGKE-PPKKVFV 119
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ + E++ +++F +G+++ ++ D T+ RGF F+TF E+ V LL N+
Sbjct: 120 GGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLE--NRY 177
Query: 122 ELAGA-QVEVKKAEPKK 137
G+ + E+K A+PK+
Sbjct: 178 HQIGSGKCEIKVAQPKE 194
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + D+ +FG+V + I D T RSRGFGF+ F ++VD +L +
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVL-E 89
Query: 118 GNKLELAGAQVEVKKAE-------PKK-------PNLPQPSYRRY 148
+ +L G ++ K+A+ PKK P++ + R Y
Sbjct: 90 LTEHKLDGKLIDPKRAKAIKGKEPPKKVFVGGLSPDITEEQLREY 134
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ ++ F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + D + VDKV+E H ++GK ++ KR A+ K+ KK+FV
Sbjct: 60 DPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA---KALKGKE-PPKKVFV 115
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ +E++ K++F FG+++ ++ D T+ RGF FIT+ E+ V LL +
Sbjct: 116 GGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLL-ESRYH 174
Query: 122 ELAGAQVEVKKAEPKK 137
++ + E+K A+PK+
Sbjct: 175 QIGSGKCEIKVAQPKE 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+F+GG+ ++ + ++ +FG+V + I D T RSRGFGF+ F +VD +
Sbjct: 27 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV--- 83
Query: 118 GNKLELAGAQVEVKKAEPKK 137
LEL +++ K +PK+
Sbjct: 84 ---LELKEHKLDGKLIDPKR 100
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D + V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 33 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 87
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F FG+++ ++ D ++ RGF FITF E+ V +L K
Sbjct: 88 GGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 147
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 148 -ISGSKCEIKVAQPKE 162
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 59 IFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 118
+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 119 NKLELAGAQVEVKKA 133
L G ++ KKA
Sbjct: 61 EH-RLDGRVIDPKKA 74
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGFV + +P VDKV + H +NGK ++ K+ A+ SK+ KKIFV
Sbjct: 90 DPMTGRSRGFGFVLFKEPESVDKVASQKEHKLNGKVIDPKKA---KAMKSKE-PVKKIFV 145
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG-NK 120
GG+ E++ +++F FG+V+ ++ ++ T++ RGF FITF E+ V ++ K +
Sbjct: 146 GGLSPDTPEEKVREYFGAFGEVESVELPMENKTNKRRGFCFITFKEEEPVKKIMEKKYHN 205
Query: 121 LELAGAQVEV 130
+ L+ +++V
Sbjct: 206 IGLSKCEIKV 215
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ + + KD+F +FG+V + + D T RSRGFGF+ F ++VD +A
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEPESVDK-VAS 115
Query: 118 GNKLELAGAQVEVKKA------EPKK--------PNLPQPSYRRY 148
+ +L G ++ KKA EP K P+ P+ R Y
Sbjct: 116 QKEHKLNGKVIDPKKAKAMKSKEPVKKIFVGGLSPDTPEEKVREY 160
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ ++D H I+G+ VE KR +P+ + + + K
Sbjct: 57 MKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVK 116
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F +FG + I+ D T + RGF FI FD VD ++ +
Sbjct: 117 KLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 176
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++VKKA K+
Sbjct: 177 KTHT-IKNKTLDVKKAIAKQ 195
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 23 QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
Query: 115 L-AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 83 QNARPHKID--GRTVEPKRAVPRQ 104
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD--FKTK 57
MKD KT + RGFGF+TY+ ++D H I+G+ VE KR +P+ + + + K
Sbjct: 57 MKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVK 116
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGG+ +E+ +++F +FG + I+ D T + RGF FI FD VD ++ +
Sbjct: 117 KLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ 176
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ ++VKKA K+
Sbjct: 177 KTH-NIKNKTLDVKKAIAKQ 195
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ K F ++G++ + +M+D T RSRGFGFIT+ +D+
Sbjct: 23 QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
Query: 115 L-AKGNKLELAGAQVEVKKAEPKK 137
A+ +K++ G VE K+A P++
Sbjct: 83 QNARPHKID--GRTVEPKRAVPRQ 104
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVG--SKDFKTK 57
M+D T + RGFGFVT+ + VD ++ H+I+GK V+ KR +P+ + TK
Sbjct: 55 MRDPTTKRSRGFGFVTFTGKTEVDAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTK 114
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED ++F ++G+V + +I+ D +T + RGFGF+TFD +VD + +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFSKYGNVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 118 GNKLELAGAQVEVKK 132
+ + + G + +V+K
Sbjct: 175 KSHM-VNGHRCDVRK 188
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+KIFVGG+ S+ ++ ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEVDAAMK 82
Query: 117 KGNKLELAGAQVEVKKAEPK 136
+ + + G V+ K+A P+
Sbjct: 83 QRPHV-IDGKTVDPKRAVPR 101
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +++F+GG+ + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGS--KDFKTK 57
M+D + + RGFGFVT++ + VD + H I+G+ VE KR + + G K
Sbjct: 41 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 100
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
K+FVGGI E +D+F ++G + +I+ D + + RGFGF+TFD VD ++ +
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 160
Query: 118 GNKLELAGAQVEVKKAEPKKPNLPQPSYR 146
+ G EV+KA ++ S R
Sbjct: 161 KYHT-INGHNAEVRKALSRQEMQEVQSSR 188
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ E+ ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 117 KGNKLELAGAQVEVKKA 133
+ G VE K+A
Sbjct: 69 -ARPHSIDGRVVEPKRA 84
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPK--GAVGSKDFKTK 57
M+D T + RGFGFV+++ S VD + + HII+GK V+ KR +P+ + +K
Sbjct: 53 MRDPATKRSRGFGFVSFSKQSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSK 112
Query: 58 KIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 117
+++V G+ ED FK+ F ++G++ + +I+ D +T + RGF FITFD AVD +
Sbjct: 113 RLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLI 172
Query: 118 GNKLELAGAQVEVKKAEPKK 137
+ + + + +VKKA K+
Sbjct: 173 KSHM-INNYRCDVKKALSKE 191
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+F+GG+ SS ++ K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A
Sbjct: 21 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMA 80
Query: 117 KGNKLELAGAQVEVKKAEPKK 137
+ + G V+ K+A P++
Sbjct: 81 NRPHI-IDGKTVDPKRAVPRE 100
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKD------ 53
M+D +T + RGFGFVTY+ VD + H ++G+ VE PK AV +D
Sbjct: 69 MRDPQTKRSRGFGFVTYSCVEEVDAAMAARPHKVDGRVVE-----PKRAVSREDSVKPGA 123
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F ++G ++ ++M D + + RGF F+TFD VD
Sbjct: 124 HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVD 183
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EVKKA K+
Sbjct: 184 KIVVQKYHT-INGHNCEVKKALSKQ 207
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ +D ++ F ++G + + +MRD T RSRGFGF+T+ + VD
Sbjct: 35 QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAA 94
Query: 115 LAKGNKLELAGAQVEVKKA 133
+A ++ G VE K+A
Sbjct: 95 MA-ARPHKVDGRVVEPKRA 112
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 1 MKDRKTGQPRGFGFVTYADPSVVDKVIEDT-HIINGKQVEIKRTIPKGAVGSKD------ 53
M+D T + RGFGFVTYA VD + H ++G+ VE PK AV +D
Sbjct: 46 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE-----PKRAVSREDSQRPGA 100
Query: 54 -FKTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 112
KKIFVGGI E +D+F Q+G ++ +IM D + + RGF F+TFD +VD
Sbjct: 101 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD 160
Query: 113 DLLAKGNKLELAGAQVEVKKAEPKK 137
++ + + G EV+KA K+
Sbjct: 161 KIVIQKYHT-VNGHNCEVRKALSKQ 184
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 55 KTKKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL 114
+ +K+F+GG+ ++ + F Q+G + + +MRD +T RSRGFGF+T+ T + VD
Sbjct: 12 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA 71
Query: 115 L-AKGNKLELAGAQVEVKKA 133
+ A+ +K++ G VE K+A
Sbjct: 72 MNARPHKVD--GRVVEPKRA 89
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query: 3 DRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFV 61
D TG+ RGFGF+ + D S V+KV+ + H ++G+ ++ PK A+ K KKIFV
Sbjct: 37 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID-----PKKAMAMKKDPVKKIFV 91
Query: 62 GGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 121
GG+ E++ +++F QFG+++ ++ D ++ RGF FIT+ E V +L K
Sbjct: 92 GGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKVLEKKFHT 151
Query: 122 ELAGAQVEVKKAEPKK 137
++G++ E+K A+PK+
Sbjct: 152 -VSGSKCEIKVAQPKE 166
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 57 KKIFVGGIPSSVNEDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 116
+K+FVGG+ ++ + KD+F +FG+V + I D +T RSRGFGFI F +V+ +L
Sbjct: 3 EKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLD 62
Query: 117 KGNKLELAGAQVEVKKA 133
+ L G ++ KKA
Sbjct: 63 QKEH-RLDGRVIDPKKA 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.144 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,113,953,309
Number of Sequences: 23463169
Number of extensions: 467663318
Number of successful extensions: 9436363
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 47975
Number of HSP's successfully gapped in prelim test: 43943
Number of HSP's that attempted gapping in prelim test: 3360676
Number of HSP's gapped (non-prelim): 1681063
length of query: 314
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 172
effective length of database: 9,027,425,369
effective search space: 1552717163468
effective search space used: 1552717163468
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)