BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021297
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LND7|SKI16_ARATH F-box protein SKIP16 OS=Arabidopsis thaliana GN=SKIP16 PE=1 SV=1
Length = 436
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 219/300 (73%), Gaps = 6/300 (2%)
Query: 1 MYPWPLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILY 60
MYPW LVKRV+ CWD LK WL NFPEAKATLRKG +E D+Q+ E SLKVKLP+PTR+LY
Sbjct: 80 MYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDLQEFETSLKVKLPLPTRLLY 139
Query: 61 RFCDGQECQTDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKE-IRRHLDFPGRD 119
RF DGQE + + G++GLIGGYS Y H VNVYL+PL ++ ETKE R L F R
Sbjct: 140 RFVDGQELSSPNGLD-GSLGLIGGYSAYSHDVNVYLLPLKEVMRETKESFMRDLGFSSRL 198
Query: 120 KYVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQD 179
+V+A S S K F L+CT GQL+ GT N +++PCVP+AL+ H N DQQQD
Sbjct: 199 DLIVMAASVVASLKIFLLDCTTGQLFTGTSN----RQLLPCVPDALVRSVHDTNGDQQQD 254
Query: 180 GMLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELA 239
MLLWLEEHGRRL G I +R + N+K I+LFPE PPLCS++VTNGV++RAS+VFIPE++
Sbjct: 255 AMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLCSVSVTNGVQVRASSVFIPEIS 314
Query: 240 DPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEAVIG 299
+ Y +AYSIRMSL+PEGC++NG SSCQL RHW+I A+N V+ V+GEAVIG
Sbjct: 315 NLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWRHWVIRADNEVIDNVNGEAVIG 374
>sp|Q9UK99|FBX3_HUMAN F-box only protein 3 OS=Homo sapiens GN=FBXO3 PE=1 SV=3
Length = 471
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 117/303 (38%), Gaps = 61/303 (20%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQK-- 153
Query: 70 TDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLDF---------PGRDK 120
+ GL+G + H + L+ + ++ R+ L + G +
Sbjct: 154 ------LVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQ-RQGLKYCLPLTFCIHTGLSQ 206
Query: 121 YVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQDG 180
Y+ V + ++ F C + +N P A+ G
Sbjct: 207 YIAVEAAEGRNKNEVFYQCPDQM----ARN-----------PAAIDMFIIGATFTD---- 247
Query: 181 MLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELAD 240
W + + + +G + ++ ++++ P C +A T + + S F+PEL+
Sbjct: 248 ---WFTSYVKNVVSGGFPIIRDQIFRYVH-----DPEC-VATTGDITVSVSTSFLPELSS 298
Query: 241 PESDTEKYLFAYSIRMSL----LPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEA 296
Y F Y IR+ + LPE +CQL R+W I V V G
Sbjct: 299 VHP--PHYFFTYRIRIEMSKDALPE---------KACQLDSRYWRITNAKGDVEEVQGPG 347
Query: 297 VIG 299
V+G
Sbjct: 348 VVG 350
>sp|D4ABP9|FBX3_RAT F-box only protein 3 OS=Rattus norvegicus GN=Fbxo3 PE=3 SV=1
Length = 480
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 61/303 (20%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQK-- 153
Query: 70 TDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLDF---------PGRDK 120
+ GL+G + H + L+ + ++ R+ L + G +
Sbjct: 154 ------LVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQ-RQGLKYCLPLTFCIHTGLSQ 206
Query: 121 YVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQDG 180
Y+ V + ++ F C + +N P A+ G
Sbjct: 207 YIAVEAAEGRNKNEVFYQCPDQM----ARN-----------PAAIDMFIIGAT------- 244
Query: 181 MLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELAD 240
W + + +G + ++ ++I+ P C +A T + + S F+PEL+
Sbjct: 245 FTDWFTSYVNNVVSGGFPIIRDQIFRYIH-----DPEC-VATTGDITVSVSTSFLPELSS 298
Query: 241 PESDTEKYLFAYSIRMSL----LPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEA 296
Y F Y IR+ + LPE +CQL R+W I V V G
Sbjct: 299 VHP--PHYFFTYRIRIEMSRDALPE---------KACQLDSRYWRITNAKGDVEEVQGPG 347
Query: 297 VIG 299
V+G
Sbjct: 348 VVG 350
>sp|A6H7H7|FBX3_BOVIN F-box only protein 3 OS=Bos taurus GN=FBXO3 PE=2 SV=1
Length = 469
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQK-- 153
Query: 70 TDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHI---IMETKEIRRHLDF-----PGRDKY 121
+ GL+G + H + L+ + + + ++ L G +Y
Sbjct: 154 ------LVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQRQGLKSCLPLTFCIHTGLSQY 207
Query: 122 VVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQDGM 181
+ V + ++ F C + +N P A+ G
Sbjct: 208 IAVEAAEGRNKNEVFYQCPDQM----ARN-----------PAAIDMFIIGAT-------F 245
Query: 182 LLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELADP 241
W + + +G + ++ ++++ P C +A T + + S F+PEL+
Sbjct: 246 TDWFTSYVNSVVSGGFPIIRDQIFRYVH-----DPEC-VATTGDITVSVSTSFLPELSSV 299
Query: 242 ESDTEKYLFAYSIRMSL----LPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEAV 297
Y F Y IR+ + LPE +CQL R+W I V V G V
Sbjct: 300 HP--PHYFFTYRIRIEMSKDALPE---------KACQLDSRYWRITNAKGDVEEVQGPGV 348
Query: 298 IG 299
+G
Sbjct: 349 VG 350
>sp|Q9DC63|FBX3_MOUSE F-box only protein 3 OS=Mus musculus GN=Fbxo3 PE=2 SV=1
Length = 480
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 115/303 (37%), Gaps = 61/303 (20%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ W LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWRDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQK-- 153
Query: 70 TDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLDF---------PGRDK 120
+ GL+G + H + L+ + ++ R+ L + G +
Sbjct: 154 ------LVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQ-RQGLKYCLPLTFCIHTGLSQ 206
Query: 121 YVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQDG 180
Y+ V + ++ F C + +N P A+ G
Sbjct: 207 YIAVEAAEGRNKNEVFYQCPDQM----ARN-----------PAAIDMFIIGAT------- 244
Query: 181 MLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELAD 240
W + + +G + ++ ++I+ P C +A T + + S F+PEL+
Sbjct: 245 FTDWFTSYVNNVVSGGFPIIRDQIFRYIH-----DPEC-VATTGDITVSVSTSFLPELSS 298
Query: 241 PESDTEKYLFAYSIRMSL----LPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEA 296
Y F Y IR+ + LPE +CQL R+W I V V G
Sbjct: 299 VHP--PHYFFTYRIRIEMSRDALPE---------KACQLDSRYWRITNAKGDVEEVQGPG 347
Query: 297 VIG 299
V+G
Sbjct: 348 VVG 350
>sp|Q6BW41|SMI1_DEBHA KNR4/SMI1 homolog 1 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DEHA2B14542g PE=3 SV=2
Length = 451
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 7 VKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQ 66
V V+ W +KNWL + P+ +TL+ ++AD+ +K L +KLP Y+ DGQ
Sbjct: 70 VHEVRLAWRHIKNWLLKYSPDLNSTLQSPCTDADLSDFQKDLNIKLPNCLIEFYKITDGQ 129
Query: 67 ECQTDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLDF 115
F G+ GL+ G + L+P+ +++ T+ R+ D+
Sbjct: 130 SY----FNDNGSGGLVFG---------LKLMPIDEVMVMTEHWRKVADY 165
>sp|Q6BJY4|SMI2_DEBHA KNR4/SMI1 homolog 2 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DEHA2F26422g PE=3 SV=2
Length = 590
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 5 PLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKV-KLPVPTRILYRFC 63
P + + WDR+++WL E +PE L G + AD+ + E L LPV R Y+
Sbjct: 112 PPLPSIDSLWDRIESWLEEEYPELGDNLNDGVTTADLNEFENDLGCGSLPVEIRQFYKRH 171
Query: 64 DGQ 66
DGQ
Sbjct: 172 DGQ 174
>sp|Q6FL35|SMI1_CANGA KNR4/SMI1 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0L06534g PE=3
SV=1
Length = 584
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 3 PWPLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRF 62
P V V W + W +E P+ ATL + DI+ E+ L+V LP + YR
Sbjct: 71 PSEGVSEVLLAWRHIDTWTSEYNPDLNATLSDPCTANDIKHAEEDLEVVLPKALKASYRI 130
Query: 63 CDGQECQTDDFESI-GAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLD 114
DGQE D ES+ G GLI G + L+ L I+ T+ R D
Sbjct: 131 HDGQE----DLESMTGTSGLIYG---------LQLMTLDEIVAMTQRWRSVAD 170
>sp|Q82UC1|APAG_NITEU Protein ApaG OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=apaG PE=3 SV=1
Length = 127
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
+K+ +++P+ +DPE+ E+Y+FAY+I IN + QL RHWII +
Sbjct: 9 IKVEVRTIYLPDQSDPEA--ERYVFAYTI---------TINNTGSVASQLVSRHWIITSG 57
Query: 286 NVVVSVVSGEAVIG 299
+ V V G V+G
Sbjct: 58 DGVTREVRGLGVVG 71
>sp|P32566|SMI1_YEAST Cell wall assembly regulator SMI1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SMI1 PE=1 SV=1
Length = 505
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 13 CWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQTDD 72
W + W +E+ P+ ATL ++ DI E+ L+V P P + ++ DGQE D
Sbjct: 93 AWRHIDFWTSEHNPDLNATLSDPCTQNDITHAEEDLEVSFPNPVKASFKIHDGQE----D 148
Query: 73 FESI-GAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIR 110
ES+ G GL FYG L+ L ++ T+ R
Sbjct: 149 LESMTGTSGL-----FYG----FQLMTLDQVVAMTQAWR 178
>sp|Q47AB8|APAG_DECAR Protein ApaG OS=Dechloromonas aromatica (strain RCB) GN=apaG PE=3
SV=1
Length = 127
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
++++ FIPE +DPE+D +Y+FAY+I + + E QL RHWII
Sbjct: 9 IEVQPMPQFIPEQSDPEND--RYIFAYTITIKNIGE---------VPAQLVSRHWIITDG 57
Query: 286 NVVVSVVSGEAVIG 299
N V V G V+G
Sbjct: 58 NNEVQEVRGLGVVG 71
>sp|Q75AQ9|SMI1_ASHGO KNR4/SMI1 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ADL139W PE=3 SV=2
Length = 657
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 13 CWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQTDD 72
W + +W +E+ P+ ATL + DI EK L + P R R DGQE D
Sbjct: 69 AWRHIDSWCSEHNPDLYATLSSPCTNNDIMWAEKDLAITFPAAVRASLRTHDGQE----D 124
Query: 73 FESI-GAMGLIGGYSFYG 89
ES+ GA GLI G G
Sbjct: 125 VESMQGASGLIYGLKLMG 142
>sp|Q8EB92|APAG_SHEON Protein ApaG OS=Shewanella oneidensis (strain MR-1) GN=apaG PE=1
SV=1
Length = 126
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ N +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDNSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGKTSEVQGAGVVG 70
>sp|Q0HLT3|APAG_SHESM Protein ApaG OS=Shewanella sp. (strain MR-4) GN=apaG PE=3 SV=1
Length = 126
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ + +++ +I + + PE +KYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDDSIRVEVKTEYIEQQSSPED--QKYLFSYTITIVNLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N +S V G V+G
Sbjct: 52 IITDANGKISEVQGAGVVG 70
>sp|Q2IGT4|APAG_ANADE Protein ApaG OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=apaG PE=3 SV=1
Length = 125
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 219 SIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRR 278
S AVT G+++ + F PE ++P ++LF+YS+R V+N + QL R
Sbjct: 2 STAVTEGIEVTVRSTFRPERSEPG----RFLFSYSVR--------VVN-QGEAPAQLVSR 48
Query: 279 HWIIHANNVVVSVVSGEAVIG 299
HWII N V G+ V+G
Sbjct: 49 HWIIVDANGEREEVVGDGVVG 69
>sp|Q6CN28|SMI1_KLULA KNR4/SMI1 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=KLLA0E15862g PE=3 SV=1
Length = 535
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 13 CWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQTDD 72
W + NW +++ P+ ATL + DI EK L + P R R DGQ
Sbjct: 73 AWRHIDNWTSQHNPDLAATLSDPCTRHDINNAEKDLDIIFPASVRASLRLHDGQ------ 126
Query: 73 FESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIR 110
E + +M GG F+G + L+ L I+ T+ R
Sbjct: 127 -EDLVSMTGTGGL-FFG----LQLMGLDEIVQMTRTWR 158
>sp|A0L065|APAG_SHESA Protein ApaG OS=Shewanella sp. (strain ANA-3) GN=apaG PE=3 SV=1
Length = 126
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ + +++ +I + + PE +KYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDDSIRVEVKTEYIEQQSSPED--QKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N +S V G V+G
Sbjct: 52 IITDANGKISEVQGAGVVG 70
>sp|Q0HS05|APAG_SHESR Protein ApaG OS=Shewanella sp. (strain MR-7) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ + +++ +I + + PE +KYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDDSIRVEVKTEYIEQQSSPED--QKYLFSYTITIVNLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N ++ V G V+G
Sbjct: 52 IITDANGKITEVQGAGVVG 70
>sp|A9L437|APAG_SHEB9 Protein ApaG OS=Shewanella baltica (strain OS195) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|A1RMU9|APAG_SHESW Protein ApaG OS=Shewanella sp. (strain W3-18-1) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|A4Y434|APAG_SHEPC Protein ApaG OS=Shewanella putrefaciens (strain CN-32 / ATCC
BAA-453) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|A6WK58|APAG_SHEB8 Protein ApaG OS=Shewanella baltica (strain OS185) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|A3D187|APAG_SHEB5 Protein ApaG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091)
GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|B8EB36|APAG_SHEB2 Protein ApaG OS=Shewanella baltica (strain OS223) GN=apaG PE=3 SV=1
Length = 126
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDTSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHANNVVVSVVSGEAVIG 299
II N S V G V+G
Sbjct: 52 IITDANGNTSEVQGAGVVG 70
>sp|B6JD70|APAG_OLICO Protein ApaG OS=Oligotropha carboxidovorans (strain ATCC 49405 /
DSM 1227 / OM5) GN=apaG PE=3 SV=1
Length = 130
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
AVT +++ F+PE + PE +++ +AYSI ++NG S QL+ RHW
Sbjct: 4 AVTRQIEVLVEPEFLPERSSPEK--QQFFWAYSI--------TIVNGGP-DSVQLKTRHW 52
Query: 281 IIHANNVVVSVVSGEAVIG 299
+I V GE V+G
Sbjct: 53 VITDGFGQQQEVRGEGVVG 71
>sp|B0TV51|APAG_SHEHH Protein ApaG OS=Shewanella halifaxensis (strain HAW-EB4) GN=apaG
PE=3 SV=1
Length = 126
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 222 VTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWI 281
+T+ V++ +I + P+ D KYLF+Y+I I+ + L+RRHW
Sbjct: 4 LTSSVRVDVKTEYIETQSSPDED--KYLFSYTI---------TIHNLGSDDVTLKRRHWC 52
Query: 282 IHANNVVVSVVSGEAVIG 299
I +N S V G V+G
Sbjct: 53 ITDSNGRKSEVHGTGVVG 70
>sp|Q3SGR3|APAG_THIDA Protein ApaG OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=apaG PE=3 SV=1
Length = 127
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
+ I + ++ E +DP +D +Y+FAY+I I + + QL RHW+I
Sbjct: 9 INISVNTAYLAEQSDPSAD--RYVFAYTI---------TIENVGTVAAQLISRHWVITDA 57
Query: 286 NVVVSVVSGEAVIG 299
+ VV V G V+G
Sbjct: 58 DDVVQEVKGLGVVG 71
>sp|Q6CDX0|SMI1_YARLI KNR4/SMI1 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=YALI0B20570g PE=3 SV=1
Length = 713
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 5 PLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCD 64
P V W+R+ W E++PE L A+ +D+ +LE L LP+ R D
Sbjct: 141 PPAPSVAMSWERIDKWADEHYPELNDQLCYPATASDLNELEADLDCSLPLDVRDSCLIHD 200
Query: 65 GQE 67
GQE
Sbjct: 201 GQE 203
>sp|P38678|GS1_NEUCR Glucan synthesis regulatory protein OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=gs-1 PE=2 SV=1
Length = 532
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 5 PLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCD 64
P V W+++ W EN+PE L +G + D+ +LE L LP R + D
Sbjct: 124 PPPPPVASSWEKIDRWAEENYPELFDQLGEGCTVNDLNELEYQLDCTLPQDLRQSLQIHD 183
Query: 65 GQE 67
GQE
Sbjct: 184 GQE 186
>sp|B4UHA8|APAG_ANASK Protein ApaG OS=Anaeromyxobacter sp. (strain K) GN=apaG PE=3 SV=1
Length = 125
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 219 SIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRR 278
S AVT G+++ + F PE ++P ++LF+Y++R++ E QL R
Sbjct: 2 STAVTEGIEVTVRSTFRPERSEPG----RFLFSYTVRIANQGE---------VPAQLVSR 48
Query: 279 HWIIHANNVVVSVVSGEAVIG 299
WII N V G+ V+G
Sbjct: 49 RWIILDANGEREEVVGDGVVG 69
>sp|Q89VE6|APAG_BRAJA Protein ApaG OS=Bradyrhizobium japonicum (strain USDA 110) GN=apaG
PE=3 SV=2
Length = 130
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
AVT +++ F+PE + +D +Y ++Y+I VI + QL+ RHW
Sbjct: 4 AVTRQIEVTVEPNFVPEQSS--ADRSRYFWSYTI---------VITNSGEETVQLKTRHW 52
Query: 281 IIHANNVVVSVVSGEAVIG 299
II V GE V+G
Sbjct: 53 IITDATGRQQEVKGEGVVG 71
>sp|Q0AHS7|APAG_NITEC Protein ApaG OS=Nitrosomonas eutropha (strain C91) GN=apaG PE=3
SV=1
Length = 127
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
+K++ ++ + +DP E+Y+FAY+I IN + + QL RHWII
Sbjct: 9 IKVQVRTTYLQDQSDPAQ--EQYVFAYTI---------TINNIGSVASQLVSRHWIITGG 57
Query: 286 NVVVSVVSGEAVIG 299
+ V G V+G
Sbjct: 58 DGETREVRGLGVVG 71
>sp|A7ICI5|APAG_XANP2 Protein ApaG OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 /
Py2) GN=apaG PE=3 SV=1
Length = 130
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+T +++ A+ ++ E ++P D ++ +AY++ ++ L + V QL+ RHW
Sbjct: 4 AITRNIQVTATPRYVAERSEP--DQGRHFWAYTVEVANLGQETV---------QLKGRHW 52
Query: 281 IIHANNVVVSVVSGEAVIG 299
+I N V G V+G
Sbjct: 53 VITDANGHTEEVHGAGVVG 71
>sp|Q5P714|APAG_AROAE Protein ApaG OS=Aromatoleum aromaticum (strain EbN1) GN=apaG PE=3
SV=1
Length = 127
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
+++ A A F+P +DP D +Y+FAY I ++ E QL RHW+I
Sbjct: 9 IEVEAIAEFVPGQSDP--DENRYVFAYHITLTNTGE---------VPAQLISRHWVITDG 57
Query: 286 NVVVSVVSGEAVIG 299
V V G VIG
Sbjct: 58 AGKVQEVRGLGVIG 71
>sp|A7MWC5|APAG_VIBHB Protein ApaG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=apaG PE=3 SV=1
Length = 126
Score = 38.5 bits (88), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
+KI+ +I E ++PE ++Y+FAY I I ++ + QL R W+I +
Sbjct: 8 IKIQVHTKYIEEQSNPE--LQRYVFAYVI---------TIKNLSQQTVQLISRRWLITDS 56
Query: 286 NVVVSVVSGEAVIG 299
N V GE V+G
Sbjct: 57 NGKQMTVEGEGVVG 70
>sp|B3PNM4|APAG_RHIE6 Protein ApaG OS=Rhizobium etli (strain CIAT 652) GN=apaG PE=3 SV=1
Length = 130
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+T +++ ++ E +DPE D +Y++ Y I VI+ + + +L R+W
Sbjct: 4 ALTRDIEVVVEPFYLEEQSDPEDD--RYVWGYRI---------VISNNSGVAVRLVNRYW 52
Query: 281 IIHANNVVVSVVSGEAVIG 299
I N VV V+G V+G
Sbjct: 53 NITDQNGVVDEVTGPGVVG 71
>sp|B4F2I3|APAG_PROMH Protein ApaG OS=Proteus mirabilis (strain HI4320) GN=apaG PE=3 SV=1
Length = 125
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 222 VTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWI 281
++ V I+ +V+I + PE ++Y+FAY+I I+ + + +L RR+W+
Sbjct: 3 TSSKVAIQVQSVYIESQSSPEE--QRYVFAYTI---------TIHNLNKHAIRLLRRYWL 51
Query: 282 IHANNVVVSVVSGEAVIG 299
I + V GE V+G
Sbjct: 52 ITNAQGNTTEVQGEGVVG 69
>sp|C1DIX0|APAG_AZOVD Protein ApaG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
GN=apaG PE=3 SV=1
Length = 126
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 17/77 (22%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRM---SLLPEGCVINGMTFSSCQLQRRHWII 282
+ + ++PE + PE + +Y+FAYS+ + LLP QL RHW+I
Sbjct: 8 IDVSVETRYLPEQSQPEQN--RYVFAYSVTIRNNGLLP------------AQLLSRHWLI 53
Query: 283 HANNVVVSVVSGEAVIG 299
+ V V G VIG
Sbjct: 54 TDGDGHVQEVRGPGVIG 70
>sp|Q3Z5V9|APAG_SHISS Protein ApaG OS=Shigella sonnei (strain Ss046) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|P62675|APAG_SHIFL Protein ApaG OS=Shigella flexneri GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|Q0T8E5|APAG_SHIF8 Protein ApaG OS=Shigella flexneri serotype 5b (strain 8401) GN=apaG
PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|Q32K44|APAG_SHIDS Protein ApaG OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|Q326I3|APAG_SHIBS Protein ApaG OS=Shigella boydii serotype 4 (strain Sb227) GN=apaG
PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|B2U258|APAG_SHIB3 Protein ApaG OS=Shigella boydii serotype 18 (strain CDC 3083-94 /
BS512) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|B7LVU4|APAG_ESCF3 Protein ApaG OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|Q1RGE7|APAG_ECOUT Protein ApaG OS=Escherichia coli (strain UTI89 / UPEC) GN=apaG PE=3
SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|B1LFY6|APAG_ECOSM Protein ApaG OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=apaG
PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|B6HZ31|APAG_ECOSE Protein ApaG OS=Escherichia coli (strain SE11) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|B7N7S5|APAG_ECOLU Protein ApaG OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
>sp|P62672|APAG_ECOLI Protein ApaG OS=Escherichia coli (strain K12) GN=apaG PE=3 SV=1
Length = 125
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAN 285
V I+ +V+I + P D E+Y+FAY++ I + + QL R+W+I
Sbjct: 7 VCIQVQSVYIEAQSSP--DNERYVFAYTV---------TIRNLGRAPVQLLGRYWLITNG 55
Query: 286 NVVVSVVSGEAVIGM 300
N + V GE V+G+
Sbjct: 56 NGRETEVQGEGVVGV 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,104,232
Number of Sequences: 539616
Number of extensions: 5201233
Number of successful extensions: 11534
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 11439
Number of HSP's gapped (non-prelim): 162
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)