Query 021299
Match_columns 314
No_of_seqs 132 out of 1675
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 09:09:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0659 Cdk activating kinase 100.0 1.9E-59 4.1E-64 374.9 23.3 287 12-298 2-288 (318)
2 KOG0593 Predicted protein kina 100.0 1.5E-58 3.2E-63 376.1 16.5 289 12-300 2-293 (396)
3 KOG0575 Polo-like serine/threo 100.0 5.3E-56 1.1E-60 391.7 23.0 254 12-295 18-273 (592)
4 KOG0615 Serine/threonine prote 100.0 7.2E-57 1.6E-61 379.9 16.2 267 6-298 166-444 (475)
5 KOG0661 MAPK related serine/th 100.0 1.2E-56 2.5E-61 384.7 15.5 289 8-298 6-298 (538)
6 KOG0581 Mitogen-activated prot 100.0 1.2E-55 2.6E-60 369.3 19.3 259 12-301 79-345 (364)
7 KOG0663 Protein kinase PITSLRE 100.0 2E-54 4.3E-59 356.3 21.5 287 11-297 75-367 (419)
8 KOG0600 Cdc2-related protein k 100.0 5.3E-54 1.1E-58 370.8 21.6 284 11-295 116-404 (560)
9 KOG0598 Ribosomal protein S6 k 100.0 3.5E-53 7.7E-58 354.3 20.0 259 11-298 24-288 (357)
10 KOG0594 Protein kinase PCTAIRE 100.0 4.3E-52 9.4E-57 347.4 24.3 290 11-300 10-311 (323)
11 KOG0660 Mitogen-activated prot 100.0 4.8E-53 1E-57 352.3 15.7 300 10-310 20-329 (359)
12 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.5E-51 5.4E-56 354.7 26.9 282 12-294 5-288 (288)
13 KOG0592 3-phosphoinositide-dep 100.0 4.1E-52 8.9E-57 361.9 20.1 258 11-298 72-345 (604)
14 KOG0583 Serine/threonine prote 100.0 1.3E-50 2.9E-55 356.7 24.6 259 9-296 14-280 (370)
15 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.7E-50 1.4E-54 348.3 26.8 288 11-299 4-296 (303)
16 KOG0591 NIMA (never in mitosis 100.0 2.5E-52 5.5E-57 336.6 8.1 248 11-285 18-275 (375)
17 KOG0595 Serine/threonine-prote 100.0 1.9E-50 4.1E-55 341.1 19.5 261 10-298 8-275 (429)
18 KOG0033 Ca2+/calmodulin-depend 100.0 9E-52 2E-56 327.5 9.9 262 9-297 8-273 (355)
19 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-49 4.8E-54 346.0 25.9 288 12-300 6-295 (309)
20 KOG0597 Serine-threonine prote 100.0 7.2E-51 1.6E-55 355.4 15.7 256 12-297 2-257 (808)
21 cd07848 STKc_CDKL5 Catalytic d 100.0 2.5E-49 5.5E-54 342.0 23.7 282 12-294 1-287 (287)
22 cd07873 STKc_PCTAIRE1 Catalyti 100.0 9E-49 1.9E-53 340.9 26.0 290 11-301 5-296 (301)
23 KOG0658 Glycogen synthase kina 100.0 5.7E-50 1.2E-54 334.5 16.7 280 12-298 24-313 (364)
24 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-48 3.8E-53 337.2 26.0 280 12-294 1-290 (290)
25 KOG0616 cAMP-dependent protein 100.0 1.8E-49 3.9E-54 322.1 18.5 255 11-298 43-304 (355)
26 KOG0578 p21-activated serine/t 100.0 1.8E-49 3.9E-54 347.7 19.1 257 11-297 272-529 (550)
27 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-48 3.5E-53 336.4 23.8 282 13-294 1-284 (284)
28 cd07861 STKc_CDK1_euk Catalyti 100.0 5.1E-48 1.1E-52 333.4 25.7 282 13-294 1-285 (285)
29 KOG0605 NDR and related serine 100.0 1.4E-48 3E-53 339.9 21.4 261 11-298 140-452 (550)
30 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.2E-48 4.7E-53 343.8 23.0 287 13-300 1-299 (338)
31 KOG0582 Ste20-like serine/thre 100.0 3E-48 6.6E-53 330.7 22.5 270 11-299 25-301 (516)
32 KOG0662 Cyclin-dependent kinas 100.0 1E-48 2.2E-53 297.0 17.5 286 12-297 2-289 (292)
33 KOG0198 MEKK and related serin 100.0 1.6E-48 3.4E-53 331.1 19.7 261 11-299 16-284 (313)
34 cd07863 STKc_CDK4 Catalytic do 100.0 2.2E-47 4.7E-52 330.0 26.2 279 13-294 1-288 (288)
35 KOG0599 Phosphorylase kinase g 100.0 3.2E-49 7E-54 317.6 13.4 264 8-297 13-289 (411)
36 KOG0588 Serine/threonine prote 100.0 2.3E-48 5E-53 345.4 20.2 264 10-303 10-275 (786)
37 cd07876 STKc_JNK2 Catalytic do 100.0 3.2E-47 7E-52 339.0 27.0 285 9-298 18-322 (359)
38 PTZ00036 glycogen synthase kin 100.0 4.4E-48 9.5E-53 352.2 21.5 282 11-299 65-359 (440)
39 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-47 6E-52 331.0 25.4 286 13-298 1-289 (298)
40 cd07845 STKc_CDK10 Catalytic d 100.0 7.8E-47 1.7E-51 329.9 26.4 288 11-298 6-297 (309)
41 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-47 2.4E-52 332.4 20.9 254 12-298 1-261 (291)
42 KOG0585 Ca2+/calmodulin-depend 100.0 5.5E-48 1.2E-52 331.2 18.5 262 10-297 95-378 (576)
43 KOG0032 Ca2+/calmodulin-depend 100.0 5.6E-47 1.2E-51 333.6 24.9 263 7-297 30-299 (382)
44 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-47 2.7E-52 336.9 20.8 251 18-298 1-258 (323)
45 KOG0589 Serine/threonine prote 100.0 4.3E-48 9.3E-53 336.6 17.2 258 11-296 3-263 (426)
46 cd07860 STKc_CDK2_3 Catalytic 100.0 6.5E-47 1.4E-51 326.4 24.1 282 13-294 1-284 (284)
47 cd07874 STKc_JNK3 Catalytic do 100.0 7.7E-47 1.7E-51 336.1 25.2 285 9-298 14-318 (355)
48 cd07875 STKc_JNK1 Catalytic do 100.0 1E-46 2.3E-51 336.3 25.9 286 9-299 21-326 (364)
49 PTZ00263 protein kinase A cata 100.0 3.4E-47 7.4E-52 334.8 22.2 254 11-297 17-277 (329)
50 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.5E-46 5.4E-51 322.9 27.0 283 12-294 1-286 (286)
51 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-46 2.2E-51 326.7 24.6 284 11-294 4-293 (293)
52 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-46 2.3E-51 325.3 24.4 261 13-299 1-269 (285)
53 cd07853 STKc_NLK Catalytic dom 100.0 3.8E-47 8.2E-52 340.1 22.3 285 13-298 1-295 (372)
54 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.3E-47 7.2E-52 337.0 21.6 286 9-299 12-306 (343)
55 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-46 3.3E-51 325.8 25.3 284 12-295 1-295 (295)
56 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-46 5E-51 323.1 25.5 283 13-295 1-286 (286)
57 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.3E-47 7.2E-52 337.9 20.6 260 12-298 1-292 (350)
58 KOG0694 Serine/threonine prote 100.0 3.3E-47 7.2E-52 339.9 20.4 258 11-298 367-631 (694)
59 PLN00009 cyclin-dependent kina 100.0 3.7E-46 8E-51 323.4 26.1 289 12-300 2-293 (294)
60 KOG0667 Dual-specificity tyros 100.0 4.9E-47 1.1E-51 338.2 19.9 284 8-298 182-509 (586)
61 PTZ00426 cAMP-dependent protei 100.0 1E-46 2.2E-51 332.8 21.6 255 11-298 29-291 (340)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-46 2.8E-51 331.9 22.1 261 12-297 1-263 (333)
63 PHA03212 serine/threonine kina 100.0 2.9E-46 6.4E-51 335.3 24.6 278 12-300 92-385 (391)
64 cd07844 STKc_PCTAIRE_like Cata 100.0 6.5E-46 1.4E-50 321.3 25.4 283 11-294 4-291 (291)
65 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-46 4.1E-51 329.3 22.0 251 18-298 1-258 (323)
66 cd07835 STKc_CDK1_like Catalyt 100.0 8E-46 1.7E-50 319.4 25.0 281 14-294 1-283 (283)
67 PTZ00024 cyclin-dependent prot 100.0 8.9E-46 1.9E-50 326.8 25.8 295 7-302 3-324 (335)
68 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-46 5.3E-51 327.1 21.7 249 20-298 1-254 (312)
69 cd05628 STKc_NDR1 Catalytic do 100.0 3.9E-46 8.5E-51 332.4 23.3 260 12-298 1-300 (363)
70 cd05599 STKc_NDR_like Catalyti 100.0 2.8E-46 6.2E-51 333.6 22.1 260 12-298 1-303 (364)
71 cd05589 STKc_PKN Catalytic dom 100.0 4.5E-46 9.8E-51 327.1 22.8 254 14-298 1-264 (324)
72 cd05601 STKc_CRIK Catalytic do 100.0 1.4E-46 3E-51 331.3 19.6 262 12-298 1-270 (330)
73 cd05593 STKc_PKB_gamma Catalyt 100.0 3.4E-46 7.3E-51 328.3 21.9 251 18-298 1-258 (328)
74 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-45 2.3E-50 330.1 24.6 261 11-297 42-310 (370)
75 cd05590 STKc_nPKC_eta Catalyti 100.0 5.5E-46 1.2E-50 325.9 22.2 251 18-298 1-260 (320)
76 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-45 2.3E-50 318.7 23.6 281 13-294 1-284 (284)
77 KOG0192 Tyrosine kinase specif 100.0 1.6E-45 3.4E-50 321.9 24.8 251 11-289 40-297 (362)
78 PF00069 Pkinase: Protein kina 100.0 1.7E-46 3.6E-51 319.4 18.3 259 14-294 1-260 (260)
79 cd05587 STKc_cPKC Catalytic do 100.0 8E-46 1.7E-50 325.6 23.1 256 13-298 1-264 (324)
80 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-45 3.8E-50 324.3 25.3 285 11-300 4-310 (331)
81 cd05608 STKc_GRK1 Catalytic do 100.0 2.2E-45 4.7E-50 316.4 24.6 254 20-298 1-264 (280)
82 cd05591 STKc_nPKC_epsilon Cata 100.0 9.4E-46 2E-50 324.7 21.9 250 18-297 1-260 (321)
83 cd07865 STKc_CDK9 Catalytic do 100.0 5.1E-45 1.1E-49 318.3 26.2 285 10-294 10-310 (310)
84 KOG0611 Predicted serine/threo 100.0 1.4E-46 3.1E-51 317.2 15.4 258 8-296 49-308 (668)
85 KOG0201 Serine/threonine prote 100.0 7.2E-48 1.6E-52 327.9 7.6 262 11-301 12-273 (467)
86 cd05626 STKc_LATS2 Catalytic d 100.0 1.7E-45 3.7E-50 330.3 23.3 260 13-298 2-312 (381)
87 KOG0610 Putative serine/threon 100.0 1.4E-45 3.1E-50 311.8 21.2 261 11-298 76-399 (459)
88 cd05584 STKc_p70S6K Catalytic 100.0 2E-45 4.3E-50 322.9 22.9 251 17-297 1-262 (323)
89 cd07868 STKc_CDK8 Catalytic do 100.0 3E-45 6.5E-50 321.0 24.0 274 17-294 6-317 (317)
90 cd05594 STKc_PKB_alpha Catalyt 100.0 6E-46 1.3E-50 326.5 19.5 251 18-298 1-259 (325)
91 cd05118 STKc_CMGC Catalytic do 100.0 3.2E-45 7E-50 315.4 23.7 281 14-294 1-283 (283)
92 PLN00034 mitogen-activated pro 100.0 2.5E-45 5.4E-50 326.1 23.6 258 11-298 73-335 (353)
93 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-45 5.8E-50 327.2 23.8 261 11-297 42-310 (370)
94 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-45 3.7E-50 322.2 22.1 251 18-298 1-255 (316)
95 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-45 5.8E-50 316.6 23.0 283 12-294 1-286 (286)
96 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-45 3.3E-50 324.9 21.7 260 13-297 1-273 (332)
97 cd07866 STKc_BUR1 Catalytic do 100.0 4.6E-45 1E-49 318.7 24.3 284 11-294 7-311 (311)
98 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-44 2.8E-49 313.2 26.8 282 12-294 5-291 (291)
99 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-44 2.7E-49 314.8 26.8 287 8-294 3-302 (302)
100 cd05570 STKc_PKC Catalytic dom 100.0 1.8E-45 3.9E-50 322.4 21.6 251 18-298 1-259 (318)
101 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-45 2.7E-50 330.9 21.0 260 12-298 1-312 (377)
102 cd05616 STKc_cPKC_beta Catalyt 100.0 3.1E-45 6.7E-50 321.7 22.7 256 13-298 1-264 (323)
103 cd05598 STKc_LATS Catalytic do 100.0 9.6E-46 2.1E-50 331.5 19.8 260 12-298 1-308 (376)
104 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-45 4.1E-50 330.2 21.6 259 13-298 2-312 (382)
105 cd07855 STKc_ERK5 Catalytic do 100.0 3.8E-45 8.2E-50 322.6 23.1 295 10-305 3-308 (334)
106 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-45 7.8E-50 320.2 22.4 251 18-298 1-255 (316)
107 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.3E-45 9.3E-50 322.6 22.8 290 10-300 3-300 (337)
108 cd05582 STKc_RSK_N N-terminal 100.0 8E-46 1.7E-50 324.8 18.0 252 17-298 1-261 (318)
109 KOG0580 Serine/threonine prote 100.0 4.9E-46 1.1E-50 293.8 14.8 256 11-297 21-279 (281)
110 cd05597 STKc_DMPK_like Catalyt 100.0 7E-45 1.5E-49 320.4 23.9 264 12-298 1-273 (331)
111 cd05605 STKc_GRK4_like Catalyt 100.0 1E-44 2.3E-49 312.9 24.5 260 13-298 1-268 (285)
112 cd07833 STKc_CDKL Catalytic do 100.0 7.4E-45 1.6E-49 314.1 23.5 283 12-294 1-288 (288)
113 cd07850 STKc_JNK Catalytic dom 100.0 6.1E-45 1.3E-49 323.7 23.4 287 9-300 13-320 (353)
114 PHA03209 serine/threonine kina 100.0 6.4E-45 1.4E-49 323.7 23.5 275 12-297 66-357 (357)
115 cd05575 STKc_SGK Catalytic dom 100.0 1.9E-45 4.1E-50 323.0 19.8 251 18-298 1-258 (323)
116 cd07829 STKc_CDK_like Catalyti 100.0 7.7E-45 1.7E-49 312.9 23.2 281 14-294 1-282 (282)
117 cd05588 STKc_aPKC Catalytic do 100.0 5.1E-45 1.1E-49 321.0 22.5 252 18-298 1-269 (329)
118 cd08529 STKc_FA2-like Catalyti 100.0 2.2E-44 4.8E-49 305.8 25.6 254 13-294 1-256 (256)
119 cd08223 STKc_Nek4 Catalytic do 100.0 3.4E-44 7.4E-49 304.8 26.6 254 13-294 1-257 (257)
120 cd05619 STKc_nPKC_theta Cataly 100.0 6.7E-45 1.5E-49 318.4 22.7 251 18-298 1-255 (316)
121 cd05622 STKc_ROCK1 Catalytic d 100.0 7.3E-45 1.6E-49 324.7 23.0 261 11-297 42-310 (371)
122 cd05618 STKc_aPKC_iota Catalyt 100.0 7E-45 1.5E-49 320.0 22.5 252 18-298 1-269 (329)
123 KOG4717 Serine/threonine prote 100.0 1.2E-45 2.7E-50 319.7 17.3 261 9-298 15-277 (864)
124 cd07834 STKc_MAPK Catalytic do 100.0 7.9E-45 1.7E-49 320.1 22.8 287 13-300 1-298 (330)
125 cd06644 STKc_STK10_LOK Catalyt 100.0 2.3E-44 5.1E-49 311.8 24.9 264 10-300 10-278 (292)
126 KOG0666 Cyclin C-dependent kin 100.0 5.1E-46 1.1E-50 304.0 13.6 288 10-297 22-343 (438)
127 cd05627 STKc_NDR2 Catalytic do 100.0 3.9E-45 8.4E-50 325.7 20.5 260 12-298 1-300 (360)
128 cd07840 STKc_CDK9_like Catalyt 100.0 2.4E-44 5.2E-49 310.5 24.6 281 14-294 1-287 (287)
129 cd08218 STKc_Nek1 Catalytic do 100.0 2.5E-44 5.5E-49 305.5 24.2 254 13-294 1-256 (256)
130 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-44 2.5E-49 311.8 22.1 263 11-300 4-271 (280)
131 PTZ00284 protein kinase; Provi 100.0 1E-44 2.2E-49 333.3 23.2 278 11-299 128-446 (467)
132 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-44 3E-49 317.5 22.8 256 13-298 1-264 (323)
133 cd07831 STKc_MOK Catalytic dom 100.0 2E-44 4.4E-49 310.4 23.2 278 14-294 1-282 (282)
134 cd07867 STKc_CDC2L6 Catalytic 100.0 4.8E-44 1E-48 313.3 25.8 274 17-294 6-317 (317)
135 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-44 2.7E-49 319.6 22.1 287 10-299 3-300 (336)
136 cd06650 PKc_MEK1 Catalytic dom 100.0 2.8E-44 6.1E-49 316.8 24.1 284 11-300 4-308 (333)
137 cd05604 STKc_SGK3 Catalytic do 100.0 5.9E-45 1.3E-49 320.2 19.3 250 18-297 1-257 (325)
138 cd05586 STKc_Sck1_like Catalyt 100.0 3.8E-45 8.2E-50 322.1 17.4 251 20-298 1-260 (330)
139 cd06625 STKc_MEKK3_like Cataly 100.0 9.7E-44 2.1E-48 303.1 25.3 255 12-294 2-263 (263)
140 cd08221 STKc_Nek9 Catalytic do 100.0 1.8E-43 4E-48 300.3 26.6 254 13-294 1-256 (256)
141 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.1E-44 8.8E-49 315.0 23.2 252 18-298 1-267 (327)
142 cd06643 STKc_SLK Catalytic dom 100.0 8.8E-44 1.9E-48 306.6 24.8 260 12-298 5-269 (282)
143 cd06609 STKc_MST3_like Catalyt 100.0 7.7E-44 1.7E-48 305.7 24.3 259 12-300 1-260 (274)
144 cd05623 STKc_MRCK_alpha Cataly 100.0 3.7E-44 8E-49 316.0 22.8 264 12-298 1-273 (332)
145 cd05607 STKc_GRK7 Catalytic do 100.0 9.1E-44 2E-48 305.8 24.6 254 20-298 1-261 (277)
146 PTZ00283 serine/threonine prot 100.0 4.9E-44 1.1E-48 329.5 24.1 262 9-298 29-304 (496)
147 PHA03211 serine/threonine kina 100.0 8.7E-44 1.9E-48 323.4 25.5 276 11-296 168-460 (461)
148 cd05624 STKc_MRCK_beta Catalyt 100.0 3.9E-44 8.4E-49 315.7 22.3 263 12-297 1-272 (331)
149 cd05603 STKc_SGK2 Catalytic do 100.0 1.5E-44 3.4E-49 317.0 19.6 251 18-298 1-258 (321)
150 cd05602 STKc_SGK1 Catalytic do 100.0 2E-44 4.4E-49 316.8 20.2 250 18-297 1-257 (325)
151 PHA03207 serine/threonine kina 100.0 8E-44 1.7E-48 320.5 24.2 280 9-298 89-382 (392)
152 cd07842 STKc_CDK8_like Catalyt 100.0 9.8E-44 2.1E-48 311.1 23.5 282 13-294 1-316 (316)
153 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-43 2.7E-48 306.2 23.8 260 13-298 1-268 (285)
154 cd07851 STKc_p38 Catalytic dom 100.0 2.7E-44 5.8E-49 318.3 20.1 289 6-300 9-307 (343)
155 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-43 4E-48 302.2 24.1 257 11-293 8-267 (267)
156 cd07852 STKc_MAPK15 Catalytic 100.0 6E-44 1.3E-48 315.4 21.8 290 7-298 2-302 (337)
157 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-43 2.8E-48 301.1 22.9 253 12-294 3-256 (256)
158 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.2E-43 4.8E-48 301.3 24.1 260 12-294 1-267 (267)
159 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-43 3.5E-48 307.2 23.4 264 9-302 16-280 (297)
160 cd06613 STKc_MAP4K3_like Catal 100.0 2.7E-43 5.9E-48 300.1 24.3 257 12-293 3-262 (262)
161 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-43 7.7E-48 303.3 25.1 262 13-300 1-270 (285)
162 cd06655 STKc_PAK2 Catalytic do 100.0 4.6E-43 9.9E-48 304.2 25.6 260 12-301 19-279 (296)
163 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-43 2.9E-48 313.7 22.6 285 10-298 3-307 (342)
164 cd07838 STKc_CDK4_6_like Catal 100.0 4.6E-43 1E-47 302.6 25.4 278 14-294 1-287 (287)
165 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.6E-43 5.6E-48 303.7 23.6 263 12-302 1-272 (283)
166 cd06646 STKc_MAP4K5 Catalytic 100.0 2.4E-43 5.3E-48 301.4 23.2 260 8-293 5-267 (267)
167 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-43 4.5E-48 310.6 23.4 285 16-300 2-316 (327)
168 PTZ00267 NIMA-related protein 100.0 2.7E-43 5.8E-48 324.2 24.5 257 12-298 67-330 (478)
169 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-43 3.7E-48 313.0 22.3 285 10-300 13-306 (342)
170 PTZ00266 NIMA-related protein 100.0 2.4E-43 5.2E-48 336.4 24.7 269 4-300 5-304 (1021)
171 cd06654 STKc_PAK1 Catalytic do 100.0 6.7E-43 1.4E-47 303.2 25.3 259 11-299 19-278 (296)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 4.9E-43 1.1E-47 301.6 24.2 261 12-302 1-264 (279)
173 cd08217 STKc_Nek2 Catalytic do 100.0 4.9E-43 1.1E-47 298.7 24.1 254 13-294 1-265 (265)
174 cd06637 STKc_TNIK Catalytic do 100.0 5.8E-43 1.3E-47 299.8 24.5 256 10-294 4-272 (272)
175 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.5E-43 1.4E-47 307.5 25.2 288 9-301 7-298 (328)
176 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.4E-43 1.2E-47 299.2 23.8 253 13-294 1-267 (267)
177 cd05574 STKc_phototropin_like 100.0 5.3E-43 1.1E-47 306.7 24.3 260 12-298 1-296 (316)
178 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.8E-43 6.1E-48 311.9 22.7 288 9-301 14-310 (345)
179 cd07830 STKc_MAK_like Catalyti 100.0 6.4E-43 1.4E-47 301.3 24.1 279 14-294 1-283 (283)
180 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.9E-43 1.1E-47 302.6 23.2 262 12-300 1-271 (286)
181 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.4E-43 5.2E-48 312.1 21.8 286 9-299 12-306 (343)
182 cd06608 STKc_myosinIII_like Ca 100.0 6.8E-43 1.5E-47 299.5 23.8 257 10-294 4-275 (275)
183 cd05580 STKc_PKA Catalytic dom 100.0 5.5E-43 1.2E-47 302.9 23.3 254 12-298 1-261 (290)
184 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-42 3E-47 294.7 25.3 253 13-294 1-256 (256)
185 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-43 3.8E-48 309.0 20.1 246 12-289 206-455 (468)
186 cd08215 STKc_Nek Catalytic dom 100.0 1E-42 2.3E-47 295.4 24.4 254 13-294 1-258 (258)
187 cd07857 STKc_MPK1 Catalytic do 100.0 7E-43 1.5E-47 307.9 24.0 287 13-300 1-301 (332)
188 cd06605 PKc_MAPKK Catalytic do 100.0 2E-43 4.4E-48 301.4 20.0 261 12-298 1-264 (265)
189 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-42 2.4E-47 295.5 23.4 254 13-294 1-257 (257)
190 KOG0604 MAP kinase-activated p 100.0 3.3E-44 7.2E-49 292.0 13.3 256 10-298 59-329 (400)
191 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-42 2.7E-47 303.1 24.2 261 8-298 11-274 (307)
192 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-42 2.4E-47 303.5 23.8 279 12-297 1-293 (308)
193 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-42 2.8E-47 294.9 23.5 251 13-292 1-253 (255)
194 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.7E-43 8E-48 302.0 20.2 258 10-298 2-260 (277)
195 cd05578 STKc_Yank1 Catalytic d 100.0 6.6E-43 1.4E-47 297.2 21.1 254 13-294 1-258 (258)
196 cd06658 STKc_PAK5 Catalytic do 100.0 6.8E-43 1.5E-47 302.6 21.4 262 8-299 18-280 (292)
197 cd06623 PKc_MAPKK_plant_like C 100.0 2E-42 4.2E-47 295.0 23.7 257 12-298 1-263 (264)
198 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.3E-42 2.8E-47 307.0 23.3 252 11-290 6-329 (338)
199 cd06630 STKc_MEKK1 Catalytic d 100.0 2.2E-42 4.7E-47 295.6 23.9 258 13-295 1-268 (268)
200 cd06639 STKc_myosinIIIB Cataly 100.0 2.7E-42 5.8E-47 298.7 24.5 258 10-295 20-291 (291)
201 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.2E-42 4.8E-47 297.9 23.7 256 10-294 14-282 (282)
202 cd06917 STKc_NAK1_like Catalyt 100.0 2.1E-42 4.6E-47 297.2 23.5 257 13-298 2-262 (277)
203 cd06648 STKc_PAK_II Catalytic 100.0 3.8E-42 8.2E-47 297.0 25.0 261 9-299 16-277 (285)
204 cd06640 STKc_MST4 Catalytic do 100.0 2.1E-42 4.5E-47 297.3 23.2 258 11-299 3-261 (277)
205 cd06626 STKc_MEKK4 Catalytic d 100.0 5.6E-42 1.2E-46 292.3 25.5 257 13-294 1-264 (264)
206 KOG4236 Serine/threonine prote 100.0 3.9E-44 8.5E-49 311.1 12.1 253 17-297 569-825 (888)
207 cd06631 STKc_YSK4 Catalytic do 100.0 4.5E-42 9.7E-47 293.3 24.7 254 13-294 1-265 (265)
208 cd06638 STKc_myosinIIIA Cataly 100.0 4.4E-42 9.5E-47 296.6 24.4 258 9-294 15-286 (286)
209 KOG0579 Ste20-like serine/thre 100.0 4.6E-44 9.9E-49 316.5 12.0 261 11-298 31-296 (1187)
210 cd06632 STKc_MEKK1_plant Catal 100.0 5.4E-42 1.2E-46 291.3 24.4 254 13-294 1-258 (258)
211 cd06647 STKc_PAK_I Catalytic d 100.0 2.5E-42 5.4E-47 299.3 22.6 262 11-302 18-280 (293)
212 cd06633 STKc_TAO3 Catalytic do 100.0 5.9E-42 1.3E-46 299.6 24.6 265 8-302 17-284 (313)
213 cd06651 STKc_MEKK3 Catalytic d 100.0 7.7E-42 1.7E-46 292.1 24.5 255 12-295 2-265 (266)
214 cd06614 STKc_PAK Catalytic dom 100.0 3.6E-42 7.8E-47 297.2 22.6 263 7-298 14-277 (286)
215 cd05609 STKc_MAST Catalytic do 100.0 7.2E-42 1.6E-46 298.0 24.6 260 12-298 1-280 (305)
216 cd06616 PKc_MKK4 Catalytic dom 100.0 3.9E-42 8.5E-47 297.2 22.5 266 12-301 4-277 (288)
217 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-41 2.9E-46 288.1 24.9 253 13-294 1-254 (254)
218 cd06641 STKc_MST3 Catalytic do 100.0 1E-41 2.2E-46 293.1 24.3 257 11-298 3-260 (277)
219 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-41 2.3E-46 292.1 24.1 259 13-294 2-272 (272)
220 cd05572 STKc_cGK_PKG Catalytic 100.0 9.6E-42 2.1E-46 290.8 23.5 250 20-298 1-259 (262)
221 KOG0574 STE20-like serine/thre 100.0 5.5E-45 1.2E-49 297.1 3.2 262 10-301 31-293 (502)
222 cd05577 STKc_GRK Catalytic dom 100.0 7.6E-42 1.7E-46 293.8 22.7 253 20-298 1-261 (277)
223 PHA03210 serine/threonine kina 100.0 2.8E-42 6E-47 318.7 21.3 294 4-299 140-462 (501)
224 cd05064 PTKc_EphR_A10 Catalyti 100.0 1E-41 2.2E-46 291.3 23.1 251 11-290 4-260 (266)
225 cd05633 STKc_GRK3 Catalytic do 100.0 1.7E-41 3.7E-46 292.0 24.4 252 19-298 1-262 (279)
226 KOG0669 Cyclin T-dependent kin 100.0 6.2E-44 1.3E-48 284.2 8.2 288 11-298 16-322 (376)
227 cd06624 STKc_ASK Catalytic dom 100.0 2.8E-41 6E-46 288.9 25.3 255 13-294 9-268 (268)
228 cd06606 STKc_MAPKKK Catalytic 100.0 3.8E-41 8.3E-46 285.8 25.9 255 13-294 1-260 (260)
229 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-41 2.5E-46 290.0 22.7 252 17-298 1-258 (260)
230 PHA03390 pk1 serine/threonine- 100.0 3.6E-41 7.8E-46 288.1 25.8 249 10-296 12-267 (267)
231 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.9E-41 6.4E-46 291.7 25.5 267 12-300 1-275 (287)
232 cd05122 PKc_STE Catalytic doma 100.0 3.5E-41 7.5E-46 284.9 25.4 252 13-293 1-253 (253)
233 cd08228 STKc_Nek6 Catalytic do 100.0 2E-41 4.2E-46 289.6 24.1 252 12-290 2-260 (267)
234 KOG0596 Dual specificity; seri 100.0 1.4E-42 3.1E-47 302.8 16.7 261 11-297 360-633 (677)
235 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-41 3.8E-46 287.8 23.2 252 13-294 1-256 (256)
236 cd06659 STKc_PAK6 Catalytic do 100.0 1.3E-41 2.8E-46 295.3 22.6 256 12-297 21-277 (297)
237 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.9E-41 8.5E-46 286.1 24.8 247 12-290 4-253 (256)
238 cd05048 PTKc_Ror Catalytic Dom 100.0 2E-41 4.4E-46 292.0 23.3 252 11-291 4-279 (283)
239 cd05096 PTKc_DDR1 Catalytic do 100.0 3.3E-41 7.1E-46 293.7 24.7 257 11-289 4-299 (304)
240 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-41 4.4E-46 292.2 23.1 259 11-296 4-271 (284)
241 cd05581 STKc_PDK1 Catalytic do 100.0 1.1E-41 2.3E-46 293.0 20.9 253 12-294 1-280 (280)
242 cd06652 STKc_MEKK2 Catalytic d 100.0 5.2E-41 1.1E-45 286.8 24.9 255 12-295 2-265 (265)
243 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.9E-41 1.3E-45 285.0 24.7 249 11-291 3-254 (256)
244 KOG2345 Serine/threonine prote 100.0 2.4E-42 5.1E-47 274.3 14.8 255 11-291 20-296 (302)
245 cd06635 STKc_TAO1 Catalytic do 100.0 7.5E-41 1.6E-45 293.1 26.0 259 11-299 24-285 (317)
246 cd06634 STKc_TAO2 Catalytic do 100.0 3.1E-41 6.8E-46 294.4 23.4 263 6-298 9-274 (308)
247 cd06657 STKc_PAK4 Catalytic do 100.0 3.8E-41 8.3E-46 291.6 23.6 258 12-299 20-278 (292)
248 cd05104 PTKc_Kit Catalytic dom 100.0 3.8E-41 8.2E-46 301.3 24.2 253 11-291 34-370 (375)
249 KOG0607 MAP kinase-interacting 100.0 1.6E-42 3.5E-47 284.5 13.8 269 3-298 68-368 (463)
250 cd05084 PTKc_Fes Catalytic dom 100.0 4.2E-41 9.1E-46 285.2 23.1 244 18-290 1-248 (252)
251 cd05052 PTKc_Abl Catalytic dom 100.0 7.9E-41 1.7E-45 285.3 24.4 249 11-290 5-257 (263)
252 cd05579 STKc_MAST_like Catalyt 100.0 2.7E-41 5.9E-46 287.9 21.2 251 20-298 1-264 (265)
253 cd05033 PTKc_EphR Catalytic do 100.0 7.7E-41 1.7E-45 285.9 24.0 252 11-291 3-261 (266)
254 cd05606 STKc_beta_ARK Catalyti 100.0 7.7E-41 1.7E-45 287.8 23.9 252 19-298 1-262 (278)
255 KOG0577 Serine/threonine prote 100.0 9.1E-43 2E-47 306.1 12.0 257 12-298 26-285 (948)
256 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.8E-40 4E-45 283.4 26.0 252 12-290 2-260 (267)
257 cd05106 PTKc_CSF-1R Catalytic 100.0 4.9E-41 1.1E-45 300.3 23.3 252 11-290 37-367 (374)
258 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.3E-41 9.3E-46 286.5 21.8 249 11-290 5-256 (261)
259 cd06618 PKc_MKK7 Catalytic dom 100.0 5.5E-41 1.2E-45 291.3 22.8 265 11-302 14-284 (296)
260 cd05059 PTKc_Tec_like Catalyti 100.0 9.7E-41 2.1E-45 283.7 23.7 248 12-291 4-254 (256)
261 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-40 2.6E-45 288.0 24.5 259 11-298 5-287 (288)
262 cd05049 PTKc_Trk Catalytic dom 100.0 7.1E-41 1.5E-45 288.1 22.9 251 11-290 4-276 (280)
263 cd08222 STKc_Nek11 Catalytic d 100.0 6.4E-41 1.4E-45 285.3 22.4 253 13-294 1-260 (260)
264 cd08229 STKc_Nek7 Catalytic do 100.0 7.6E-41 1.7E-45 285.9 22.5 254 12-290 2-260 (267)
265 PF07714 Pkinase_Tyr: Protein 100.0 2E-41 4.4E-46 288.4 18.7 247 15-290 2-257 (259)
266 cd00192 PTKc Catalytic domain 100.0 1.4E-40 3.1E-45 282.8 23.8 245 18-291 1-260 (262)
267 KOG0690 Serine/threonine prote 100.0 1.9E-42 4E-47 284.9 11.1 259 11-298 167-431 (516)
268 PHA02988 hypothetical protein; 100.0 1.4E-40 3E-45 286.8 23.5 241 18-290 26-274 (283)
269 cd08226 PK_STRAD_beta Pseudoki 100.0 5E-41 1.1E-45 295.6 21.0 282 18-300 4-317 (328)
270 cd08216 PK_STRAD Pseudokinase 100.0 2E-40 4.2E-45 290.1 24.1 272 24-298 12-302 (314)
271 KOG0983 Mitogen-activated prot 100.0 1.5E-41 3.2E-46 273.4 15.4 263 11-300 91-358 (391)
272 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-40 3.9E-45 285.2 23.0 253 10-291 4-274 (277)
273 KOG0612 Rho-associated, coiled 100.0 2.9E-42 6.2E-47 321.9 12.5 262 11-298 74-345 (1317)
274 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-40 3.5E-45 291.0 22.8 251 11-291 6-264 (316)
275 cd05093 PTKc_TrkB Catalytic do 100.0 2.7E-40 5.8E-45 285.8 23.7 250 11-290 4-274 (288)
276 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-40 7.5E-45 281.0 24.1 248 11-290 5-256 (261)
277 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.1E-40 4.6E-45 284.9 22.9 253 10-291 4-274 (277)
278 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.8E-40 1.5E-44 279.1 25.6 246 11-289 5-254 (260)
279 KOG4279 Serine/threonine prote 100.0 8.7E-42 1.9E-46 304.8 14.0 257 17-300 580-841 (1226)
280 KOG0193 Serine/threonine prote 100.0 8.9E-42 1.9E-46 300.9 13.8 253 11-290 391-648 (678)
281 cd05068 PTKc_Frk_like Catalyti 100.0 8.2E-40 1.8E-44 278.7 25.6 248 11-290 5-256 (261)
282 KOG0584 Serine/threonine prote 100.0 5.7E-42 1.2E-46 303.6 12.5 256 12-299 39-304 (632)
283 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-40 5.4E-45 292.0 22.6 253 11-291 6-329 (337)
284 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.1E-40 1.5E-44 279.0 24.6 248 10-290 4-255 (260)
285 cd05088 PTKc_Tie2 Catalytic do 100.0 2.8E-40 6E-45 287.7 22.4 251 11-291 6-276 (303)
286 KOG0586 Serine/threonine prote 100.0 2.5E-41 5.3E-46 299.1 15.8 260 11-300 55-315 (596)
287 cd05123 STKc_AGC Catalytic dom 100.0 4E-40 8.6E-45 278.6 22.7 245 20-294 1-250 (250)
288 cd05071 PTKc_Src Catalytic dom 100.0 1E-39 2.3E-44 278.3 25.3 247 11-290 5-255 (262)
289 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-41 5.4E-46 317.7 16.4 259 10-295 477-875 (1351)
290 cd05116 PTKc_Syk Catalytic dom 100.0 4.4E-40 9.5E-45 279.8 22.6 242 19-290 2-250 (257)
291 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-40 8.9E-45 285.9 22.7 250 12-291 2-271 (297)
292 cd05034 PTKc_Src_like Catalyti 100.0 1.1E-39 2.4E-44 277.8 24.8 249 10-290 4-256 (261)
293 cd05035 PTKc_Axl_like Catalyti 100.0 7E-40 1.5E-44 280.7 23.7 250 14-291 1-268 (273)
294 PRK13184 pknD serine/threonine 100.0 3.6E-40 7.7E-45 313.5 23.7 254 12-291 2-285 (932)
295 cd05066 PTKc_EphR_A Catalytic 100.0 5.9E-40 1.3E-44 280.6 22.8 251 11-290 3-261 (267)
296 cd05032 PTKc_InsR_like Catalyt 100.0 7.4E-40 1.6E-44 281.3 23.5 251 11-290 5-273 (277)
297 cd05109 PTKc_HER2 Catalytic do 100.0 9.5E-40 2E-44 281.1 24.0 250 11-290 6-263 (279)
298 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-39 3.4E-44 277.5 25.0 254 12-294 2-264 (264)
299 KOG1989 ARK protein kinase fam 100.0 5.8E-41 1.2E-45 308.2 17.1 250 12-293 37-309 (738)
300 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-39 3.2E-44 279.9 24.9 250 11-290 6-263 (279)
301 cd05090 PTKc_Ror1 Catalytic do 100.0 8.2E-40 1.8E-44 282.0 23.3 251 12-291 5-279 (283)
302 cd05053 PTKc_FGFR Catalytic do 100.0 7.1E-40 1.5E-44 283.8 23.0 252 11-291 11-287 (293)
303 cd05613 STKc_MSK1_N N-terminal 100.0 9.4E-40 2E-44 282.6 23.7 261 13-298 1-275 (290)
304 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.7E-40 1.7E-44 285.5 23.3 252 11-291 17-295 (307)
305 cd05039 PTKc_Csk_like Catalyti 100.0 1.7E-39 3.8E-44 275.9 24.9 244 11-290 5-251 (256)
306 cd05041 PTKc_Fes_like Catalyti 100.0 1.1E-39 2.3E-44 276.3 23.2 243 18-290 1-247 (251)
307 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.7E-39 3.7E-44 277.8 24.5 251 11-290 4-262 (268)
308 cd05112 PTKc_Itk Catalytic dom 100.0 2.1E-39 4.6E-44 275.3 24.8 248 12-291 4-254 (256)
309 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-39 2.6E-44 279.3 23.2 250 14-291 1-267 (272)
310 KOG0671 LAMMER dual specificit 100.0 1.7E-41 3.6E-46 284.5 11.1 287 5-298 82-413 (415)
311 cd05091 PTKc_Ror2 Catalytic do 100.0 8.3E-40 1.8E-44 282.0 22.1 251 12-291 5-279 (283)
312 cd05060 PTKc_Syk_like Catalyti 100.0 1.8E-39 4E-44 275.9 23.8 242 18-290 1-250 (257)
313 cd05069 PTKc_Yes Catalytic dom 100.0 3.8E-39 8.1E-44 274.5 25.6 247 11-290 5-255 (260)
314 cd05094 PTKc_TrkC Catalytic do 100.0 1.6E-39 3.4E-44 281.4 23.4 250 11-290 4-277 (291)
315 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-39 3.9E-44 279.6 23.4 250 11-290 4-276 (280)
316 cd05051 PTKc_DDR Catalytic dom 100.0 2.6E-39 5.6E-44 280.6 24.1 258 11-290 4-292 (296)
317 cd05055 PTKc_PDGFR Catalytic d 100.0 3.3E-39 7.2E-44 280.8 24.7 254 9-290 32-296 (302)
318 cd05065 PTKc_EphR_B Catalytic 100.0 2.1E-39 4.6E-44 277.4 23.1 251 11-290 3-263 (269)
319 cd05082 PTKc_Csk Catalytic dom 100.0 4.7E-39 1E-43 273.3 24.8 243 11-290 5-251 (256)
320 cd05115 PTKc_Zap-70 Catalytic 100.0 3.2E-39 6.9E-44 274.6 23.6 242 19-290 2-250 (257)
321 smart00219 TyrKc Tyrosine kina 100.0 4.2E-39 9.2E-44 273.4 24.2 248 14-290 1-256 (258)
322 cd05097 PTKc_DDR_like Catalyti 100.0 3.3E-39 7.1E-44 280.0 23.7 258 11-290 4-291 (295)
323 cd05085 PTKc_Fer Catalytic dom 100.0 4.1E-39 8.8E-44 272.6 23.7 243 18-290 1-246 (250)
324 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-39 8.2E-44 289.6 24.5 252 11-290 36-392 (400)
325 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.3E-39 9.3E-44 281.7 24.2 251 11-290 11-288 (314)
326 cd05045 PTKc_RET Catalytic dom 100.0 2.9E-39 6.2E-44 279.7 22.7 249 13-290 1-281 (290)
327 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.9E-39 1.1E-43 277.2 23.6 264 11-290 2-276 (283)
328 cd05057 PTKc_EGFR_like Catalyt 100.0 6.1E-39 1.3E-43 276.1 24.1 250 11-290 6-263 (279)
329 KOG0986 G protein-coupled rece 100.0 5.9E-41 1.3E-45 286.6 11.3 264 11-300 184-455 (591)
330 cd05095 PTKc_DDR2 Catalytic do 100.0 6.1E-39 1.3E-43 278.4 23.9 258 11-290 4-292 (296)
331 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.4E-39 1.2E-43 279.8 23.7 253 10-291 13-292 (304)
332 cd05050 PTKc_Musk Catalytic do 100.0 5E-39 1.1E-43 277.8 23.0 251 11-290 4-284 (288)
333 cd05056 PTKc_FAK Catalytic dom 100.0 8.9E-39 1.9E-43 273.7 24.0 251 11-291 5-261 (270)
334 cd05583 STKc_MSK_N N-terminal 100.0 4.7E-39 1E-43 278.0 22.3 261 13-298 1-273 (288)
335 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.9E-39 1.3E-43 284.1 22.9 253 11-291 6-335 (343)
336 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.2E-39 1.6E-43 273.2 22.5 239 18-291 1-260 (262)
337 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.1E-39 2E-43 282.0 23.7 253 11-292 11-290 (334)
338 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-38 2.9E-43 272.4 24.0 251 13-291 1-266 (269)
339 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-38 2.9E-43 270.6 23.8 244 18-290 1-253 (257)
340 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.8E-39 1.5E-43 276.5 22.1 266 12-291 4-279 (284)
341 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-38 2.3E-43 274.6 23.0 251 11-290 5-271 (280)
342 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-38 3.7E-43 269.5 23.4 242 11-290 5-249 (254)
343 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2E-38 4.3E-43 273.5 23.9 265 12-290 4-278 (284)
344 cd05073 PTKc_Hck Catalytic dom 100.0 2.4E-38 5.1E-43 269.6 24.1 248 10-290 4-255 (260)
345 KOG4721 Serine/threonine prote 100.0 2E-40 4.4E-45 290.2 11.3 241 12-292 124-365 (904)
346 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-38 2.5E-43 273.7 21.7 238 19-291 2-272 (274)
347 PHA02882 putative serine/threo 100.0 1.7E-38 3.6E-43 275.4 22.9 267 1-290 1-291 (294)
348 cd05110 PTKc_HER4 Catalytic do 100.0 1.7E-38 3.7E-43 276.5 22.9 251 11-291 6-264 (303)
349 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.1E-38 6.6E-43 283.6 25.1 253 11-291 36-395 (401)
350 KOG0603 Ribosomal protein S6 k 100.0 2.2E-39 4.8E-44 288.1 17.0 243 10-294 320-566 (612)
351 cd05058 PTKc_Met_Ron Catalytic 100.0 2.7E-38 5.9E-43 269.4 23.1 245 18-291 1-255 (262)
352 cd05047 PTKc_Tie Catalytic dom 100.0 2.2E-38 4.7E-43 271.4 22.4 243 18-290 1-263 (270)
353 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.8E-39 1E-43 273.6 18.2 239 18-291 1-256 (258)
354 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.2E-38 4.8E-43 269.3 22.1 236 18-290 1-256 (259)
355 KOG1187 Serine/threonine prote 100.0 1.8E-38 3.9E-43 279.2 21.9 264 8-290 71-347 (361)
356 cd05042 PTKc_Aatyk Catalytic d 100.0 3.4E-38 7.4E-43 269.9 23.1 249 18-290 1-265 (269)
357 cd05046 PTK_CCK4 Pseudokinase 100.0 3.8E-38 8.2E-43 270.5 23.1 252 12-291 5-272 (275)
358 KOG0194 Protein tyrosine kinas 100.0 2.9E-39 6.3E-44 286.5 16.5 249 13-289 158-414 (474)
359 cd05044 PTKc_c-ros Catalytic d 100.0 2.3E-38 5.1E-43 270.8 21.4 244 18-290 1-265 (269)
360 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.4E-38 1.6E-42 267.9 24.4 249 18-290 1-265 (269)
361 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.8E-38 8.2E-43 271.5 21.7 254 12-290 4-278 (284)
362 cd05576 STKc_RPK118_like Catal 100.0 1.3E-38 2.8E-43 267.6 17.4 228 23-294 4-237 (237)
363 KOG0665 Jun-N-terminal kinase 100.0 2.6E-39 5.6E-44 265.6 12.5 279 11-295 16-314 (369)
364 cd05610 STKc_MASTL Catalytic d 100.0 6.2E-38 1.3E-42 298.3 23.9 148 11-159 3-152 (669)
365 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.5E-38 1.8E-42 267.9 22.0 250 14-291 1-268 (273)
366 KOG0696 Serine/threonine prote 100.0 4.9E-39 1.1E-43 272.3 13.5 257 12-298 349-613 (683)
367 KOG4645 MAPKKK (MAP kinase kin 100.0 4.8E-40 1E-44 310.7 7.6 259 12-296 1235-1499(1509)
368 KOG1095 Protein tyrosine kinas 100.0 5.2E-38 1.1E-42 297.2 19.7 256 6-290 686-956 (1025)
369 KOG1151 Tousled-like protein k 100.0 5.4E-39 1.2E-43 274.2 11.6 268 9-298 460-748 (775)
370 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-36 2.3E-41 260.6 24.4 248 19-290 2-264 (268)
371 KOG1026 Nerve growth factor re 100.0 4.8E-38 1E-42 288.0 14.8 248 12-288 486-755 (774)
372 smart00220 S_TKc Serine/Threon 100.0 2.4E-36 5.3E-41 253.6 23.2 242 24-294 1-244 (244)
373 KOG1290 Serine/threonine prote 100.0 5.1E-37 1.1E-41 264.6 18.8 290 4-300 69-559 (590)
374 KOG0670 U4/U6-associated splic 100.0 2.4E-38 5.1E-43 274.6 9.5 287 4-296 424-751 (752)
375 KOG0587 Traf2- and Nck-interac 100.0 5.5E-37 1.2E-41 280.4 18.5 259 11-297 18-288 (953)
376 KOG0664 Nemo-like MAPK-related 100.0 3.4E-39 7.4E-44 260.1 3.4 297 13-311 54-362 (449)
377 KOG4250 TANK binding protein k 100.0 9.5E-38 2.1E-42 280.2 12.7 270 12-284 13-297 (732)
378 KOG1006 Mitogen-activated prot 100.0 6.1E-39 1.3E-43 257.3 4.0 264 11-298 63-334 (361)
379 KOG0614 cGMP-dependent protein 100.0 3.2E-38 6.9E-43 273.2 6.8 259 11-298 419-684 (732)
380 PLN03225 Serine/threonine-prot 100.0 2.9E-36 6.2E-41 280.6 19.3 276 11-300 131-459 (566)
381 KOG0668 Casein kinase II, alph 100.0 1.9E-37 4.1E-42 243.9 8.5 279 11-300 37-331 (338)
382 KOG0608 Warts/lats-like serine 100.0 4.2E-36 9.2E-41 266.1 14.5 260 12-298 629-935 (1034)
383 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-36 4.4E-41 273.6 11.5 249 13-290 630-886 (996)
384 KOG4257 Focal adhesion tyrosin 100.0 1.5E-35 3.2E-40 262.3 15.6 247 12-289 389-643 (974)
385 KOG0695 Serine/threonine prote 100.0 1.2E-35 2.6E-40 246.0 13.9 258 12-298 250-523 (593)
386 KOG4278 Protein tyrosine kinas 100.0 2.3E-35 4.9E-40 261.1 15.5 243 13-288 268-516 (1157)
387 KOG1094 Discoidin domain recep 100.0 2.6E-35 5.6E-40 258.9 15.4 260 8-290 534-799 (807)
388 PLN03224 probable serine/threo 100.0 5.6E-34 1.2E-38 259.4 23.2 270 11-295 144-504 (507)
389 KOG0199 ACK and related non-re 100.0 1.8E-34 3.8E-39 258.3 15.8 257 11-297 109-374 (1039)
390 PLN00113 leucine-rich repeat r 100.0 9.4E-34 2E-38 282.2 22.8 254 10-291 688-947 (968)
391 KOG1167 Serine/threonine prote 100.0 1.4E-34 3.1E-39 245.9 12.3 283 8-298 32-388 (418)
392 KOG1027 Serine/threonine prote 100.0 3.3E-35 7.1E-40 267.7 8.2 254 14-302 511-778 (903)
393 cd00180 PKc Catalytic domain o 100.0 8.3E-32 1.8E-36 220.8 22.5 213 20-292 1-215 (215)
394 KOG0984 Mitogen-activated prot 100.0 4.7E-33 1E-37 215.9 13.6 214 12-227 46-268 (282)
395 KOG1152 Signal transduction se 100.0 8.4E-34 1.8E-38 249.2 9.3 198 12-212 561-769 (772)
396 KOG0576 Mitogen-activated prot 100.0 3.5E-34 7.5E-39 255.2 6.3 264 11-299 14-279 (829)
397 KOG1025 Epidermal growth facto 100.0 1.8E-32 3.8E-37 249.3 15.2 248 13-290 697-952 (1177)
398 KOG1345 Serine/threonine kinas 100.0 4.8E-33 1E-37 224.2 9.6 260 10-298 22-294 (378)
399 KOG0200 Fibroblast/platelet-de 100.0 2.7E-31 5.8E-36 249.5 22.3 248 13-289 297-573 (609)
400 KOG2052 Activin A type IB rece 100.0 1.9E-31 4.1E-36 228.1 15.9 189 9-206 208-420 (513)
401 KOG3653 Transforming growth fa 100.0 1.4E-31 3E-36 230.4 13.9 190 12-210 210-422 (534)
402 smart00221 STYKc Protein kinas 100.0 1.2E-29 2.6E-34 210.7 20.5 211 14-225 1-215 (225)
403 PLN00181 protein SPA1-RELATED; 100.0 5.3E-31 1.2E-35 256.4 11.8 201 67-297 28-271 (793)
404 KOG1024 Receptor-like protein 100.0 4.6E-30 1E-34 216.5 12.8 251 11-290 283-550 (563)
405 smart00750 KIND kinase non-cat 100.0 6.5E-29 1.4E-33 199.0 14.2 167 95-296 1-170 (176)
406 KOG0590 Checkpoint kinase and 100.0 5.1E-29 1.1E-33 231.6 6.5 267 12-299 317-593 (601)
407 KOG1164 Casein kinase (serine/ 99.9 1.8E-25 3.9E-30 195.8 23.4 253 13-291 19-293 (322)
408 KOG1163 Casein kinase (serine/ 99.9 2.6E-26 5.7E-31 182.5 14.2 216 3-223 5-232 (341)
409 COG0515 SPS1 Serine/threonine 99.9 1.9E-23 4.2E-28 182.7 24.1 262 14-297 2-281 (384)
410 PRK09188 serine/threonine prot 99.9 1.7E-24 3.8E-29 189.6 14.0 167 9-185 15-194 (365)
411 PF14531 Kinase-like: Kinase-l 99.9 1.3E-24 2.7E-29 182.8 12.6 235 13-282 13-288 (288)
412 KOG0195 Integrin-linked kinase 99.9 3.6E-24 7.8E-29 173.3 8.9 245 12-289 190-440 (448)
413 PRK10359 lipopolysaccharide co 99.9 7.9E-24 1.7E-28 172.9 10.1 174 8-206 27-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.9 2.4E-23 5.2E-28 168.0 12.0 141 17-161 2-167 (190)
415 KOG0603 Ribosomal protein S6 k 99.9 1.3E-24 2.8E-29 194.2 3.9 240 19-298 1-250 (612)
416 KOG1165 Casein kinase (serine/ 99.9 1.5E-22 3.2E-27 168.1 15.2 210 10-224 26-248 (449)
417 KOG1240 Protein kinase contain 99.9 7.3E-24 1.6E-28 199.0 4.7 248 13-291 24-291 (1431)
418 KOG0606 Microtubule-associated 99.9 5.7E-23 1.2E-27 192.6 10.1 240 10-314 81-341 (1205)
419 cd05145 RIO1_like RIO kinase f 99.9 5.1E-22 1.1E-26 160.8 13.8 142 16-162 1-168 (190)
420 KOG4158 BRPK/PTEN-induced prot 99.9 7.9E-22 1.7E-26 167.5 12.7 202 69-298 274-526 (598)
421 PRK12274 serine/threonine prot 99.8 2.7E-20 5.8E-25 149.1 13.8 185 15-212 5-207 (218)
422 KOG1166 Mitotic checkpoint ser 99.8 4.5E-20 9.8E-25 175.9 13.2 192 11-210 697-901 (974)
423 smart00090 RIO RIO-like kinase 99.8 3.9E-20 8.4E-25 154.3 11.0 151 6-161 20-198 (237)
424 KOG1023 Natriuretic peptide re 99.8 9.2E-20 2E-24 163.0 11.5 207 65-289 1-218 (484)
425 PRK10345 hypothetical protein; 99.8 8.5E-19 1.8E-23 142.9 14.1 135 15-158 5-156 (210)
426 PRK14879 serine/threonine prot 99.8 5.7E-18 1.2E-22 139.6 13.2 136 17-160 1-143 (211)
427 KOG1033 eIF-2alpha kinase PEK/ 99.8 3.5E-19 7.6E-24 156.8 5.6 177 85-295 330-516 (516)
428 KOG0590 Checkpoint kinase and 99.7 1.6E-19 3.4E-24 168.4 -0.4 263 11-296 19-291 (601)
429 cd05144 RIO2_C RIO kinase fami 99.7 2.1E-17 4.6E-22 134.8 12.1 138 14-162 17-176 (198)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 2.8E-17 6E-22 134.2 12.0 131 19-160 1-138 (199)
431 KOG0601 Cyclin-dependent kinas 99.7 1.7E-17 3.7E-22 148.7 10.9 261 9-298 111-386 (524)
432 PRK09605 bifunctional UGMP fam 99.7 9.7E-17 2.1E-21 149.9 13.2 139 11-161 332-477 (535)
433 cd05119 RIO RIO kinase family, 99.7 1.5E-16 3.3E-21 128.5 12.5 136 17-161 2-164 (187)
434 PRK01723 3-deoxy-D-manno-octul 99.7 1.4E-15 3.1E-20 127.1 13.9 135 18-160 37-191 (239)
435 KOG1243 Protein kinase [Genera 99.6 3.5E-15 7.7E-20 135.3 15.1 170 30-209 30-200 (690)
436 cd05120 APH_ChoK_like Aminogly 99.6 2.3E-15 4.9E-20 116.9 11.4 132 16-160 2-138 (155)
437 KOG3087 Serine/threonine prote 99.5 1.1E-13 2.4E-18 106.9 11.9 144 16-161 11-166 (229)
438 KOG1266 Protein kinase [Signal 99.5 7.7E-15 1.7E-19 122.5 5.5 213 62-309 118-349 (458)
439 cd05146 RIO3_euk RIO kinase fa 99.5 1.1E-13 2.3E-18 111.1 11.7 140 17-162 2-175 (197)
440 TIGR01982 UbiB 2-polyprenylphe 99.5 2.6E-13 5.6E-18 123.1 11.2 152 6-162 109-308 (437)
441 KOG3741 Poly(A) ribonuclease s 99.5 7.9E-12 1.7E-16 110.7 18.3 221 24-299 288-532 (655)
442 cd05151 ChoK Choline Kinase (C 99.4 6.1E-13 1.3E-17 105.6 10.2 128 17-160 3-136 (170)
443 KOG0606 Microtubule-associated 99.4 5.1E-14 1.1E-18 133.3 4.0 261 11-298 803-1099(1205)
444 PRK04750 ubiB putative ubiquin 99.4 1.2E-12 2.6E-17 120.3 9.6 147 9-163 117-316 (537)
445 KOG0601 Cyclin-dependent kinas 99.4 6.3E-13 1.4E-17 119.6 6.3 249 11-294 264-517 (524)
446 COG3642 Mn2+-dependent serine/ 99.4 6.6E-12 1.4E-16 97.6 11.0 133 18-161 2-141 (204)
447 COG4248 Uncharacterized protei 99.3 7.3E-11 1.6E-15 102.4 16.7 253 15-287 14-292 (637)
448 KOG2137 Protein kinase [Signal 99.2 4.4E-12 9.5E-17 115.9 3.2 154 119-297 107-271 (700)
449 cd05154 ACAD10_11_like Acyl-Co 99.2 1.1E-10 2.4E-15 96.6 11.4 140 17-160 3-206 (223)
450 PF01163 RIO1: RIO1 family; I 99.2 8.3E-11 1.8E-15 94.0 9.5 126 28-161 2-156 (188)
451 PRK15123 lipopolysaccharide co 99.2 4E-10 8.7E-15 95.4 12.7 141 18-160 28-194 (268)
452 COG0478 RIO-like serine/threon 99.1 4.4E-10 9.6E-15 92.7 10.7 138 14-161 93-252 (304)
453 PRK09902 hypothetical protein; 99.0 1.5E-08 3.2E-13 81.7 13.0 137 21-160 27-179 (216)
454 PF06293 Kdo: Lipopolysacchari 99.0 7.8E-09 1.7E-13 84.6 11.8 136 25-161 17-171 (206)
455 PF06176 WaaY: Lipopolysacchar 99.0 4.7E-09 1E-13 84.9 9.8 138 8-159 27-182 (229)
456 COG1718 RIO1 Serine/threonine 98.8 1.8E-08 4E-13 82.4 7.6 139 17-161 53-216 (268)
457 COG0661 AarF Predicted unusual 98.7 8.2E-08 1.8E-12 88.2 10.1 144 17-163 130-317 (517)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 6.8E-07 1.5E-11 74.2 11.9 134 18-160 7-182 (226)
459 KOG1035 eIF-2alpha kinase GCN2 98.5 2.5E-07 5.5E-12 89.9 8.0 199 60-298 231-441 (1351)
460 COG2112 Predicted Ser/Thr prot 98.4 2.1E-06 4.5E-11 66.7 9.2 130 15-161 25-156 (201)
461 cd05150 APH Aminoglycoside 3'- 98.4 5.5E-06 1.2E-10 69.7 12.7 72 18-96 4-77 (244)
462 PF01636 APH: Phosphotransfera 98.4 4.9E-06 1.1E-10 69.2 11.6 138 17-160 2-197 (239)
463 KOG1235 Predicted unusual prot 98.3 9.8E-06 2.1E-10 74.5 11.2 152 5-161 152-355 (538)
464 PLN02876 acyl-CoA dehydrogenas 98.2 2.4E-05 5.1E-10 77.3 13.4 80 16-96 42-129 (822)
465 PF10707 YrbL-PhoP_reg: PhoP r 98.2 5.9E-05 1.3E-09 61.0 13.4 133 17-158 6-170 (199)
466 cd05157 ETNK_euk Ethanolamine 98.1 5E-05 1.1E-09 63.5 12.1 72 17-95 3-76 (235)
467 KOG2270 Serine/threonine prote 98.1 1.5E-05 3.3E-10 69.1 8.7 143 15-161 147-314 (520)
468 TIGR02721 ycfN_thiK thiamine k 98.0 3.6E-05 7.9E-10 65.3 9.8 133 19-160 3-175 (256)
469 cd05155 APH_ChoK_like_1 Unchar 97.9 3.7E-05 8.1E-10 64.3 7.6 31 130-160 164-194 (235)
470 cd05153 HomoserineK_II Homoser 97.9 0.00014 3.1E-09 62.9 11.5 138 16-160 18-205 (296)
471 KOG0576 Mitogen-activated prot 97.9 1.2E-06 2.6E-11 80.4 -2.4 243 15-297 245-490 (829)
472 PF13095 FTA2: Kinetochore Sim 97.9 0.00021 4.6E-09 57.4 10.6 127 12-158 37-206 (207)
473 TIGR00938 thrB_alt homoserine 97.9 0.00014 3E-09 63.5 10.5 138 17-160 27-217 (307)
474 cd05156 ChoK_euk Choline Kinas 97.8 0.0002 4.4E-09 62.3 10.4 72 17-95 3-81 (302)
475 PRK09550 mtnK methylthioribose 97.7 0.0014 3.1E-08 58.8 14.5 78 16-95 30-115 (401)
476 PRK05231 homoserine kinase; Pr 97.7 0.0012 2.6E-08 57.9 14.0 31 130-160 187-217 (319)
477 PF12260 PIP49_C: Protein-kina 97.7 0.00012 2.7E-09 58.8 7.1 98 60-161 8-112 (188)
478 PLN02421 phosphotransferase, a 97.6 0.00092 2E-08 58.9 11.1 139 15-160 17-213 (330)
479 PLN02236 choline kinase 97.4 0.0024 5.1E-08 56.6 11.4 139 15-160 39-231 (344)
480 TIGR01767 MTRK 5-methylthiorib 97.3 0.0043 9.3E-08 54.7 12.1 82 19-101 2-92 (370)
481 KOG2268 Serine/threonine prote 97.3 0.00023 5E-09 61.0 3.9 136 14-160 94-251 (465)
482 PRK12396 5-methylribose kinase 97.3 0.0025 5.4E-08 56.9 10.4 78 17-95 34-117 (409)
483 KOG1093 Predicted protein kina 97.3 0.0013 2.7E-08 59.9 8.2 172 57-297 28-200 (725)
484 COG5072 ALK1 Serine/threonine 97.3 0.0036 7.9E-08 54.7 10.6 130 81-226 296-428 (488)
485 PLN02756 S-methyl-5-thioribose 97.2 0.0086 1.9E-07 53.7 12.6 76 16-95 36-119 (418)
486 COG3173 Predicted aminoglycosi 97.2 0.0069 1.5E-07 52.6 11.3 139 15-162 28-230 (321)
487 TIGR02906 spore_CotS spore coa 97.1 0.0099 2.1E-07 51.8 11.7 29 130-159 187-215 (313)
488 TIGR02904 spore_ysxE spore coa 97.0 0.012 2.6E-07 51.4 11.9 30 131-160 197-226 (309)
489 KOG1826 Ras GTPase activating 97.0 5.2E-05 1.1E-09 76.4 -3.6 152 61-213 1279-1441(2724)
490 PTZ00384 choline kinase; Provi 96.9 0.0097 2.1E-07 53.4 10.4 77 15-95 53-133 (383)
491 PF01633 Choline_kinase: Choli 96.9 0.0029 6.3E-08 51.9 6.4 32 130-161 143-175 (211)
492 PF03881 Fructosamin_kin: Fruc 96.8 0.014 3.1E-07 50.1 10.3 75 14-95 19-96 (288)
493 cd05152 MPH2' Macrolide 2'-Pho 96.7 0.0084 1.8E-07 51.4 8.1 30 131-160 186-216 (276)
494 PRK10593 hypothetical protein; 96.6 0.012 2.6E-07 51.1 8.7 107 12-130 14-127 (297)
495 PTZ00296 choline kinase; Provi 96.5 0.034 7.3E-07 51.0 11.3 73 16-95 109-190 (442)
496 COG2334 Putative homoserine ki 96.4 0.037 8.1E-07 48.5 10.1 135 18-159 32-227 (331)
497 PRK06148 hypothetical protein; 96.2 0.072 1.6E-06 54.1 12.6 31 130-160 203-236 (1013)
498 PRK11768 serine/threonine prot 95.9 0.26 5.5E-06 43.4 13.3 28 130-159 196-223 (325)
499 PF07387 Seadorna_VP7: Seadorn 95.8 0.06 1.3E-06 44.0 7.8 103 38-158 86-190 (308)
500 KOG2269 Serine/threonine prote 94.5 0.058 1.2E-06 46.7 4.4 137 15-159 255-431 (531)
No 1
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.9e-59 Score=374.93 Aligned_cols=287 Identities=73% Similarity=1.187 Sum_probs=278.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|...++||+|.||.||+|++..+|+.||||+++........+....+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 68999999999999999999999999999999999988887778888899999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|++.+|...++.+...++...+..++.++++|++|||++.|.||||||.|++++.+|.+||+|||+++.++++.......
T Consensus 82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~ 161 (318)
T KOG0659|consen 82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ 161 (318)
T ss_pred eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
+.|.||.|||++++...|+...|+||.|||+.||+.+.+.|.+.++.+++..++..++++.+++||++..+++.....+.
T Consensus 162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~ 241 (318)
T KOG0659|consen 162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF 241 (318)
T ss_pred eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..++....++.+++++.+|+++||..||.+|+++.|+|+|+||++..
T Consensus 242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence 99999999999999999999999999999999999999999999754
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.5e-58 Score=376.11 Aligned_cols=289 Identities=40% Similarity=0.675 Sum_probs=259.7
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+.|+.+..+|+|++|+||+|+++.+|+.||||++.-+..++...+-.++|+++|++++|+|+|.++.+|...+..++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 67999999999999999999999999999999998887777777777899999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
||+-++++.+......++...+..++.|++.|+.|+|+++++||||||+||+++.+|.+||||||+|+....+...++..
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY 161 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY 161 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence 99999999999988889999999999999999999999999999999999999999999999999999987788899999
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc---chhhh
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP---DYVEY 248 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 248 (314)
+.|.||.|||++.++.+|....|||++||++.||++|.+.|++..+.+++..+....+...|....=....+ ...--
T Consensus 162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP 241 (396)
T KOG0593|consen 162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP 241 (396)
T ss_pred hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence 999999999999999999999999999999999999999999999999999999999888776543221111 11111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
......+++..++.++.-+.+|+++||..||++|++.+|+|.||||..+-++
T Consensus 242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er 293 (396)
T KOG0593|consen 242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIER 293 (396)
T ss_pred CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHH
Confidence 2223344566678899999999999999999999999999999999877543
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-56 Score=391.70 Aligned_cols=254 Identities=28% Similarity=0.454 Sum_probs=230.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+|...++||+|+|.+||.+++..+|+.||+|++.+... ......+..+|+++.+.++|||||+++++|++.+++|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 379999999999999999999999999999999987653 3334456779999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|.|.. +|..+.+ +++.++|..|+.++.||+.||.|||+++|+|||||..|+|++++..|||+|||+|+....+.....
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 99995 5555555 777899999999999999999999999999999999999999999999999999999988878888
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
..+|||-|+|||++.. ...+..+||||+||+||.|+.|++||......+++.++.......+.
T Consensus 177 TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---------------- 239 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---------------- 239 (592)
T ss_pred eecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----------------
Confidence 8999999999999986 66799999999999999999999999999999999998766433322
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
.++.++.+||.++|+.||.+|||+++||.|+||+
T Consensus 240 ------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 240 ------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred ------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 4699999999999999999999999999999993
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-57 Score=379.88 Aligned_cols=267 Identities=30% Similarity=0.477 Sum_probs=230.4
Q ss_pred ccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-----cchhhHHHHHHHhhcCCCCeeeeecee
Q 021299 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-----VNFTALREIKLLKELKSPHIIELIDAF 80 (314)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~ 80 (314)
.++.+.+.|.+.+.||+|+||.|-+|..+.+|+.||+|.+.+...... ......+|+++|+.++||+|+++.++|
T Consensus 166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f 245 (475)
T KOG0615|consen 166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF 245 (475)
T ss_pred ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence 567789999999999999999999999999999999999987653331 222345899999999999999999999
Q ss_pred ccCCeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC---CcEEEeecc
Q 021299 81 PHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFG 156 (314)
Q Consensus 81 ~~~~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~---~~~~l~df~ 156 (314)
+.....|+||||++| +|.+.+-..+ .+.+.....++.|++.|+.|||++||+||||||+|||++.+ .-+||+|||
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc
Confidence 999999999999985 8888887554 58899999999999999999999999999999999999776 579999999
Q ss_pred ceeeeCCCCCcccccccCccccCcccccCc--cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHH-HHHHHHHhhCCCCC
Q 021299 157 LARIFGSPDRRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID-QLGKIFAAFGTATP 233 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~--~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 233 (314)
+|+..+.. ..-...+|||.|.|||++.+. ..+..+.|+|||||+||-+++|.+||....... ...++.++.....|
T Consensus 325 lAK~~g~~-sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p 403 (475)
T KOG0615|consen 325 LAKVSGEG-SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP 403 (475)
T ss_pred hhhccccc-eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC
Confidence 99988743 344567899999999999752 234568999999999999999999998766555 77777777666666
Q ss_pred CCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..|. .+++++.+||.+||..||++|||++|+|+||||+...
T Consensus 404 ~~w~------------------------~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 404 LQWD------------------------RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hhhh------------------------hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 5554 4699999999999999999999999999999999654
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-56 Score=384.70 Aligned_cols=289 Identities=40% Similarity=0.679 Sum_probs=255.3
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCC-e
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG-N 85 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~-~ 85 (314)
..+.++|.+++.||.|.||.||+|+.+.+|+.||||.++.....-+. .--.+|+..|++++ ||||+++.+++.++. .
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 35689999999999999999999999999999999999876543211 12237999999998 999999999987777 9
Q ss_pred EEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 86 ~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
.|+|||||+.+|.++++.++..+++..++.|+.||++||+|+|++|++|||+||+|||+..+..+||+|||+|+... ..
T Consensus 85 L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~-Sk 163 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR-SK 163 (538)
T ss_pred EeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc-cC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998763 34
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.-++..+.|.||.|||++.....|+.+.|+|++|||++|+.+-++.|++.++.+++.++....|++....|+....+...
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 45567788999999999988889999999999999999999999999999999999999999999999888875433333
Q ss_pred h--hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 V--EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 ~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
- .+.+....++....+++++++.+||.+||.+||++||||.|+|+||||+--.
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 2 3333445556777788999999999999999999999999999999998543
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-55 Score=369.27 Aligned_cols=259 Identities=29% Similarity=0.472 Sum_probs=221.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-eEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv~ 90 (314)
++.+.++.||+|+.|+||+++|+.+++.+|+|++.. ..++...+.+.+|+++++..+||+||.+++.|..++ .++|+|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 577889999999999999999999999999999943 344556667889999999999999999999998888 499999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||+| +|...+.. .+.+++.....++.++++||.|||. ++|+||||||+|||++..|.|||||||-+...-.. ..
T Consensus 158 EYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a 234 (364)
T KOG0581|consen 158 EYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IA 234 (364)
T ss_pred hhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hc
Confidence 99997 55555544 4679999999999999999999995 99999999999999999999999999999876333 55
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCC-----CcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-----SDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
...+||..|||||.+.+ ..|+.++||||||+.++|+.+|..|+... ...+.+..+.. .++..+|..
T Consensus 235 ~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~----~ppP~lP~~---- 305 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD----EPPPRLPEG---- 305 (364)
T ss_pred ccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc----CCCCCCCcc----
Confidence 67889999999999988 78999999999999999999999999775 34444444433 333333321
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
..|+++++||..||++||++|||+.|+++|||+++..+..
T Consensus 306 ------------------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 306 ------------------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred ------------------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 2599999999999999999999999999999999886543
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-54 Score=356.26 Aligned_cols=287 Identities=43% Similarity=0.787 Sum_probs=260.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--CCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~i 88 (314)
.++|..+..|++|+||.||+|+++.+++.||+|+++.........-...+|+.++.+++|||||.+-.+... -+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 588999999999999999999999999999999999887666655566799999999999999999987754 347999
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||||+.+|.+.+...+.++...++..++.|+++|++|||++.|+||||||+|++++..|.+||+|||+|+..+++-...
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~ 234 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPY 234 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccC
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999888888
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...+-|.||.|||++.+...|+.+.|+||+|||+.+|+++.+.|.+....+++..++...+.+....||....++.....
T Consensus 235 T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~ 314 (419)
T KOG0663|consen 235 TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM 314 (419)
T ss_pred cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc
Confidence 88899999999999999899999999999999999999999999999999999999999999999999999888876433
Q ss_pred --ccccCCCCCccCCC--CCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 249 --QYVAAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 249 --~~~~~~~~~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.......+...++. +++...+|+..+|..||.+|.|++|.|.|+||...
T Consensus 315 ~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 315 TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 33333334444443 55999999999999999999999999999999974
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-54 Score=370.85 Aligned_cols=284 Identities=45% Similarity=0.805 Sum_probs=253.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~i 88 (314)
.+.|..+++||+|.||.||++++..+|+.||+|+++.+...+....-..+|+.+|++++||||+++.+...+. +.+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 5789999999999999999999999999999999998876666665667999999999999999999977554 79999
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
|||||+-+|..++......+++.++..++.||+.||+|||++|+.|||||.+|||+|.+|.+||+|||+|.+...... .
T Consensus 196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~ 275 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP 275 (560)
T ss_pred EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc
Confidence 999999999999998888899999999999999999999999999999999999999999999999999997755443 3
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+-|.||.|||++.+...|+.+.|+||.||||.||++|++.|.+..+.+++..|++.-+++....|+ ...++....
T Consensus 276 ~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~ 354 (560)
T KOG0600|consen 276 YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATI 354 (560)
T ss_pred cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccc
Confidence 6677889999999999998899999999999999999999999999999999999999999999999998 445553332
Q ss_pred hccc--cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 248 YQYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 248 ~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
+... ....+...+..+++...+|+..||..||++|.||.++|+|+||.
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 2222 22334455778899999999999999999999999999999994
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-53 Score=354.33 Aligned_cols=259 Identities=29% Similarity=0.467 Sum_probs=229.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|+++++||+|+||+|+.++++.+++.||+|++++...-.. .......|..++.+++||+|++++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 6899999999999999999999999999999999988764443 233556899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
+||+.| .|..-++ +.+.++++.++-++..|+.||.|||++||+||||||+|||++.+|.++|+|||+|+..-......
T Consensus 104 ld~~~GGeLf~hL~-~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t 182 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ-REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT 182 (357)
T ss_pred EeccCCccHHHHHH-hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc
Confidence 999997 5555554 44569999999999999999999999999999999999999999999999999999766666666
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...+||+.|+|||++.+ ..++.++|.||||+++|+|++|.+||.+.+.......+...-....+.
T Consensus 183 ~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~-------------- 247 (357)
T KOG0598|consen 183 RTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG-------------- 247 (357)
T ss_pred ccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--------------
Confidence 66789999999999988 689999999999999999999999999999999999887763222221
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC----CHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI----TAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~ell~h~~~~~~~ 298 (314)
.++.+++++++++|..||++|. ++++|-+||||..++
T Consensus 248 -------------~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 248 -------------YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred -------------cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 2599999999999999999996 689999999999985
No 10
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.3e-52 Score=347.37 Aligned_cols=290 Identities=48% Similarity=0.813 Sum_probs=263.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC-eeeeeceeccCC-----
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKG----- 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~----- 84 (314)
...|..++.||+|++|+||+|+.+.+|+.||+|+++.....+.......+|+.+++.++|+| |+.+.+++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 56789999999999999999999999999999999988776666667779999999999999 999999987666
Q ss_pred -eEEEEEecccccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 85 -NLHLVFEFMETDLETVIRNTN---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 85 -~~~iv~e~~~g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
..++||||++-+|..++.... ..++...+..+++||+.||+|||+++|+||||||.||+++++|.+||+|||+|..
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 889999999999999998766 4688899999999999999999999999999999999999999999999999998
Q ss_pred eCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
..-+.......++|.+|.|||++.+...|+...||||+|||++||+++.+.|.+..+.+++..++...+++....||...
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 87777788899999999999999998889999999999999999999999999999999999999999999999999888
Q ss_pred cccchh-hhcccc-CCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 241 YLPDYV-EYQYVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 241 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.++... .+.... ...+....+..++...+++.+||+.+|.+|.|++.+|+||||+.....
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 777665 333333 445666667777899999999999999999999999999999988543
No 11
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-53 Score=352.30 Aligned_cols=300 Identities=37% Similarity=0.631 Sum_probs=257.2
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-----CC
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----KG 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~ 84 (314)
+...|..++.||.|++|.|+.+.++.+|+.||+|++...........+..+|++.+++++|+||+.+.+.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4567777899999999999999999999999999997555555555566799999999999999999998744 34
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.+|+|+|+|+.+|...++... .++++.+..++.|++.||+|+|+-|++|+||||.|++++.+..+||+|||+|+.....
T Consensus 100 DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred eeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc
Confidence 689999999888888877654 4999999999999999999999999999999999999999999999999999987542
Q ss_pred --CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC--
Q 021299 165 --DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA-- 240 (314)
Q Consensus 165 --~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (314)
...-+..+.|.||.|||++.....|+.+.||||.||||.||++|++.|++.+...++..+....+++.++.+....
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 2223456779999999999888899999999999999999999999999999999999999999999877665544
Q ss_pred -cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcceeecccceec
Q 021299 241 -YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFVFVDFCSYL 310 (314)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~~~~~~~ 310 (314)
-..-..........++...++++++.+.+|+.+||..||.+|+|++|+|+|||+..+-+--..+..|+.+
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~~ 329 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPIF 329 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCCC
Confidence 2222233445556667778899999999999999999999999999999999999998777766555543
No 12
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.5e-51 Score=354.72 Aligned_cols=282 Identities=40% Similarity=0.765 Sum_probs=238.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||.|++|+||++.++.++..+++|.+...... .....+.+|+++++.++||||+++++++..++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 5799999999999999999999999999999998754322 223356689999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|++|+|.+.+......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.............
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~ 163 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNE 163 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCc
Confidence 99999999888776678999999999999999999999999999999999999999999999999998654444344455
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.+++.|+|||.+.+...++.++|+||||+++|+|++|.+||......+....+....+......|+..............
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
T cd07871 164 VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFP 243 (288)
T ss_pred eecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccC
Confidence 67889999999877667899999999999999999999999999999999999888888888777765433322221111
Q ss_pred --cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 252 --AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 252 --~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
...+.....+.+++++.+||.+||+.||.+|||++|+++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 244 QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1111222345678999999999999999999999999999998
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-52 Score=361.93 Aligned_cols=258 Identities=29% Similarity=0.460 Sum_probs=225.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhh-HHHHHHHhhc-CCCCeeeeeceeccCCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA-LREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~-~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i 88 (314)
..+|+..+.||+|+|++|++|.++.+++.||||++.+.-...+...+. ..|-..|..| .||+|++++..|+++...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 578999999999999999999999999999999987653222222222 2577778888 79999999999999999999
Q ss_pred EEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-
Q 021299 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 89 v~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~- 166 (314)
|+||++ |+|++++.+. +.+++..++.++.+|+.||+|||++||+||||||+|||++.+++++|+|||.++.+.....
T Consensus 152 vLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 999998 6999999876 4699999999999999999999999999999999999999999999999999988743211
Q ss_pred ----------cc--cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 167 ----------RF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 167 ----------~~--~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
.. ...+||-.|.|||+|.. ...+..+|+|+|||++|+|+.|.+||.+.++.-+..+++......+
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-- 307 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-- 307 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC--
Confidence 11 44689999999999977 7789999999999999999999999999999999999988743333
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
++.++.+.+||+++|..||++|+++.||.+||||.+++
T Consensus 308 --------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 308 --------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred --------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 35689999999999999999999999999999999884
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-50 Score=356.73 Aligned_cols=259 Identities=33% Similarity=0.488 Sum_probs=227.6
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc---cCcchhhHHHHHHHhhcC-CCCeeeeeceeccCC
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 84 (314)
...+.|.+.+.||+|+||+|+++.+..+|..+|+|.+...... ......+.+|+.+++.++ ||||+++.+++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4578999999999999999999999999999999977665221 123445558999999999 999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeeeC
Q 021299 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFG 162 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~~ 162 (314)
.+++||||+.| +|.+++.+ .+++.+..++.+++|++.|++|||++||+||||||+||+++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 99999999986 99999998 6789999999999999999999999999999999999999999 999999999999875
Q ss_pred CCCCcccccccCccccCcccccCcc-CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~-~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
..........|++.|+|||++.+.. +...++||||+|++||.|++|..||...+.......+..+... +|
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~-----~p---- 243 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK-----IP---- 243 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc-----CC----
Confidence 4556667788999999999998866 5579999999999999999999999998777777775544211 11
Q ss_pred ccchhhhccccCCCCCccCCCC-CHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSA-SDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
..+ ++++++|+.+||..||.+|+++.++++||||+.
T Consensus 244 -------------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 -------------------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -------------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 224 899999999999999999999999999999997
No 15
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.7e-50 Score=348.30 Aligned_cols=288 Identities=40% Similarity=0.702 Sum_probs=229.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||+|++|+||++.++.+++.+++|++....... ....+.+|+.+++.++||||+++.+++.+....++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 378999999999999999999999999999999987654322 2235568999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
||+++++.+.+....+.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+............
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 162 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSN 162 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCC
Confidence 99999999998877777999999999999999999999999999999999999999999999999999765444334445
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc-HHHHHHHHHhhCCCCCCCCCCcCcccchhhh-
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEY- 248 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (314)
..+++.|+|||.+.+...++.++|+||||+++|+|++|..||....+ ......+....+......|+.....+.....
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd07869 163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER 242 (303)
T ss_pred CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence 66788999999987656688999999999999999999999987544 3445555555555444444433221111000
Q ss_pred -ccccCCCCCccC--CCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 249 -QYVAAPPLRSLF--PSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 249 -~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
...........+ ...++.+.+|+.+||+.||.+|||++|+++||||+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 000000000111 124678999999999999999999999999999998764
No 16
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-52 Score=336.63 Aligned_cols=248 Identities=28% Similarity=0.489 Sum_probs=218.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeec-eeccCC-eEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-AFPHKG-NLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~i 88 (314)
..+|+++++||.|+||+||++.+..+|..+|.|.+.....+.........|+.+|++++||||+++++ .+.+++ ..+|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 46799999999999999999999999999999999877777667777889999999999999999998 554444 4899
Q ss_pred EEeccc-ccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh--CC--cccCCCCCCceEEecCCcEEEeeccceee
Q 021299 89 VFEFME-TDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHK--KW--VLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 89 v~e~~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~--~~--i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
|||+|. |+|..+++. .+..+++..+|.++.|++.||.++|+ .. +.|+||||.||+++.+|.|||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999998 688888863 45679999999999999999999999 44 99999999999999999999999999999
Q ss_pred eCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
+.+........+|||.|||||.+.+ ..|+.+||||||||++|||...++||.+.+-.+....+.++..++.|.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~------ 250 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD------ 250 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH------
Confidence 8877777778899999999999988 789999999999999999999999999997777777776663222221
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA 285 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 285 (314)
...|..+..||..|+..||++||+.
T Consensus 251 --------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 --------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred --------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 2358899999999999999999996
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-50 Score=341.13 Aligned_cols=261 Identities=32% Similarity=0.501 Sum_probs=227.5
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..++|...+.||+|+|++||+|+++.++..||||.+...............|+++|+.++||||+.++++.+..+++|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 46789999999999999999999999999999999988765555555667899999999999999999999999999999
Q ss_pred Eeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC------CcEEEeeccceeeeC
Q 021299 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH------GQLKLADFGLARIFG 162 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~------~~~~l~df~~~~~~~ 162 (314)
||||. |+|.++++..+ .+++..++.++.||+.|+++||+++|+||||||.|||++.. -.+||+|||+|+...
T Consensus 88 MEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999 58888888765 59999999999999999999999999999999999999875 358999999999875
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+........|+|.|||||++.. ..|+.|+|+||+|+++|+|++|.+||......+.+..+.+.....+.
T Consensus 167 -~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~--------- 235 (429)
T KOG0595|consen 167 -PGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV--------- 235 (429)
T ss_pred -chhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc---------
Confidence 4555567789999999999976 68999999999999999999999999999999988866554222111
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
....+++...+|+...|+.+|..|.+..+-..|+++..-.
T Consensus 236 ----------------~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 236 ----------------LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred ----------------hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 1123477788999999999999999999999999987654
No 18
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9e-52 Score=327.50 Aligned_cols=262 Identities=32% Similarity=0.474 Sum_probs=236.0
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
-+.++|.+.+.||+|.|+.|+++.+..+|+.+++|.+...........++.+|+++.+.++||||+.+.+.+.+.+..|+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 45799999999999999999999999999999999998877777677788899999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec---CCcEEEeeccceeeeCCC
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGLARIFGSP 164 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~---~~~~~l~df~~~~~~~~~ 164 (314)
|||++.| +|...+-.+ -..++..+...++||+.+|.|+|.+||+|+|+||.|+++-. .--+||+|||.+...+ .
T Consensus 88 vFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~ 165 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-D 165 (355)
T ss_pred EEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-C
Confidence 9999997 676666544 34789999999999999999999999999999999999943 2369999999999887 6
Q ss_pred CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....+..|+|.|+|||++.. .+++..+|||+.||+||-|+.|.+||-+.+......++.++-...++..|+
T Consensus 166 g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~------- 237 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWD------- 237 (355)
T ss_pred ccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccC-------
Confidence 666677889999999999988 789999999999999999999999999999999999998886666665554
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.+++++++||++||..||.+|+|+.|.|+|||+..-
T Consensus 238 -----------------~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 238 -----------------TVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred -----------------cCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 569999999999999999999999999999999864
No 19
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-49 Score=345.97 Aligned_cols=288 Identities=39% Similarity=0.756 Sum_probs=241.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||+|++|.||++.++.++..+++|.+....... ....+.+|+++++.++||||+++++++..++..+++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 68999999999999999999999999999999997654322 23356689999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|+++++.+.+...+..+++..+..++.||+.||++||++|++|+||||+||+++.++.++|+|||.+.............
T Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 164 (309)
T cd07872 85 YLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNE 164 (309)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccc
Confidence 99999999988777778999999999999999999999999999999999999999999999999997654444333445
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+..+....+....+......|+..............
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
T cd07872 165 VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFP 244 (309)
T ss_pred cccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcC
Confidence 67888999999877667899999999999999999999999999988888888888877777666654333222211111
Q ss_pred --cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 252 --AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 252 --~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.........+.+++++.+||.+||+.||.+|||++|+++||||+.+..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~ 295 (309)
T cd07872 245 KYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR 295 (309)
T ss_pred ccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence 1111122335679999999999999999999999999999999987644
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.2e-51 Score=355.39 Aligned_cols=256 Identities=32% Similarity=0.513 Sum_probs=233.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||+|+||+||+++++.+.+.||+|.+.+....+...+.+.+|+++++.++||||+.+++.|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 68999999999999999999999999999999999887776666678899999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|+.|+|..++...+ .++++.+..++.+++.||.|||+++|.|+|+||.||++..+|.+|+||||+++.++.........
T Consensus 82 ~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi 160 (808)
T KOG0597|consen 82 YAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI 160 (808)
T ss_pred hhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence 99998888887654 59999999999999999999999999999999999999999999999999999998888777888
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.|||.|||||++.+ .+++..+|+|||||++||++.|++||-..........+... +..||
T Consensus 161 kGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d-----~v~~p-------------- 220 (808)
T KOG0597|consen 161 KGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD-----PVKPP-------------- 220 (808)
T ss_pred cCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC-----CCCCc--------------
Confidence 89999999999986 88999999999999999999999999888777777766543 22222
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
..++..+.+|+..+|.+||.+|.+..+++.|||.++-
T Consensus 221 ---------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 221 ---------STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred ---------ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 1469999999999999999999999999999998864
No 21
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.5e-49 Score=341.97 Aligned_cols=282 Identities=37% Similarity=0.639 Sum_probs=224.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|+||+++++.++..+++|++............+.+|+.+++.++||||+++.+++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47999999999999999999999999999999998765444444566789999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-Ccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTH 170 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~ 170 (314)
|++++++..+......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE 160 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence 99998888777666679999999999999999999999999999999999999999999999999998653322 22234
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc-
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ- 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (314)
..+++.|+|||.+.+ ..++.++|+||||+++|+|++|.+||......+....+....+..+...+......+......
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07848 161 YVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF 239 (287)
T ss_pred cccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence 567889999999876 557899999999999999999999999887776666655544433322211100000000000
Q ss_pred ---cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 ---YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.............++.++.+||.+||+.||++|||++|+++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000111223468899999999999999999999999999998
No 22
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=9e-49 Score=340.89 Aligned_cols=290 Identities=38% Similarity=0.724 Sum_probs=238.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||.|++|.||++.+..+++.+++|.+....... ....+.+|+++++.++||||+++++++...+..+++|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 368999999999999999999999999999999987554322 2235568999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
||+++++...+......+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 84 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (301)
T cd07873 84 EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSN 163 (301)
T ss_pred eccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccc
Confidence 99999999999877777999999999999999999999999999999999999999999999999999765443333344
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+..+....+....+......|+.............
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
T cd07873 164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243 (301)
T ss_pred cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence 55688899999987756678999999999999999999999999888888887777777666665554322211111111
Q ss_pred --ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 251 --VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 251 --~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
............+++.+.+||.+||+.||.+|||++|+++||||+...++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~ 296 (301)
T cd07873 244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERI 296 (301)
T ss_pred CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchh
Confidence 111112233456789999999999999999999999999999999887654
No 23
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-50 Score=334.47 Aligned_cols=280 Identities=37% Similarity=0.659 Sum_probs=240.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-----eE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 86 (314)
=.|...+++|.|+||.||.+....+++.+|||+...+..-. ..|+++++.++||||+++.-+|.... ..
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 36888999999999999999999999999999987654322 17999999999999999998874322 34
Q ss_pred EEEEecccccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeeeC
Q 021299 87 HLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFG 162 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~~ 162 (314)
.+||||++-+|.+.++. .+..++.-.+.-+..||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+...
T Consensus 98 nlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 98 NLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 58999999999999874 35568889999999999999999999999999999999999987 899999999999885
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
....+ .+...+..|.|||++.+...|+.+-||||.||++.||+.|++.|++.+..+++..+.+.+|.++.+++..+...
T Consensus 178 ~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 178 KGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred cCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 54444 66777889999999999999999999999999999999999999999999999999999999998887765444
Q ss_pred cchhhhccccCCCCCc-cCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 243 PDYVEYQYVAAPPLRS-LFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
-....+......+... .....++++.+|+.++|.-+|++|.++.|++.||||....
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 3333333333333323 5567899999999999999999999999999999999764
No 24
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-48 Score=337.20 Aligned_cols=280 Identities=40% Similarity=0.736 Sum_probs=226.7
Q ss_pred hhccceeeeCccccceEEEEEECC-CCcEEEEEEeecCCcccCcchhhHHHHHHHhhc---CCCCeeeeeceec-----c
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFP-----H 82 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~-----~ 82 (314)
++|++.+.||+|++|+||+|.+.. ++..+++|.+..............+|+.+++.+ .||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 467899999876654443333455676666655 6999999999874 3
Q ss_pred CCeEEEEEecccccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 83 KGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 83 ~~~~~iv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
....+++||++++++.+++... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+...
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 4568999999999999988754 345899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
... .......+++.|+|||.+.+ ..++.++|+||||+++|+|++|.+||......+....+....+...+..++....
T Consensus 161 ~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 161 SFQ-MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred cCC-cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 433 23344567889999999876 5688999999999999999999999999999999999888877666666654432
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.... .+......++....+.+++.+.+|+.+||+.||++|||+.|+|+||||
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQ-AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccch-hccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 2211 111222223334445678999999999999999999999999999997
No 25
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-49 Score=322.14 Aligned_cols=255 Identities=26% Similarity=0.398 Sum_probs=224.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|++++.||.|+||+|.+++++.+|.-||+|.+.+...-.- ......+|.++|+.+.||+++.+++.+.+.++.|+|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 5789999999999999999999999999999999976542111 112334799999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||.+| .+.+++++ .+++++..++-++.||+.||+|||+++|++|||||+|||++.+|.+||+|||+|+.... ..
T Consensus 123 meyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---rT 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---RT 198 (355)
T ss_pred EeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---cE
Confidence 999997 56666654 44699999999999999999999999999999999999999999999999999997633 24
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...+|||.|+|||++.+ ..++.++|-|+||+++|||+.|.+||-..++..+...+..+.-..++
T Consensus 199 ~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~--------------- 262 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS--------------- 262 (355)
T ss_pred EEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc---------------
Confidence 56789999999999988 88999999999999999999999999999999999999887443332
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCC-----CCHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR-----ITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R-----ps~~ell~h~~~~~~~ 298 (314)
.+++++++|+.++|+.|-++| ....+|..||||++++
T Consensus 263 -------------~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 263 -------------YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred -------------ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 359999999999999999999 3567899999999874
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-49 Score=347.69 Aligned_cols=257 Identities=30% Similarity=0.503 Sum_probs=226.4
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
...|.....||+|+.|.||.+....+++.||+|.+....... ...+.+|+.+++..+|+|||.+++.|...+..|+||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 478899999999999999999999999999999998765432 335679999999999999999999998889999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|.+.+.... +++.+++.+++.++.||+|||.+||+|+|||.+||++..+|.+||+|||+|...........
T Consensus 350 Eym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred eecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 99997 5555555444 99999999999999999999999999999999999999999999999999998877777888
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
.-+|||+|||||+... ..|+.+.||||||++++||+-|.+||-..++...+..+... ++...
T Consensus 428 TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~l---------------- 489 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKL---------------- 489 (550)
T ss_pred cccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCc----------------
Confidence 8999999999999977 78999999999999999999999999988887777776543 22111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.....+|+++++|+.+||+.||++|+++.|||+||||+.-
T Consensus 490 --------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 490 --------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred --------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 1234679999999999999999999999999999999643
No 27
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.6e-48 Score=336.36 Aligned_cols=282 Identities=47% Similarity=0.806 Sum_probs=228.5
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||.|++|.||++.+..+|+.+++|.+............+.+|+++++.++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 58999999999999999999999999999999976554444444566899999999999999999999999999999999
Q ss_pred ccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccc
Q 021299 93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 93 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
+++++.+.+....+.+++..++.++.||+.||.+||++|++|+||+|+||+++.++.++|+|||.+...+..........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (284)
T cd07839 81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEV 160 (284)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCc
Confidence 99999998887677799999999999999999999999999999999999999999999999999986654433334456
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCc-cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
+++.|+|||.+.+...++.++|+||||+++|+|++|..| |...+.......+....+......++..............
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07839 161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY 240 (284)
T ss_pred cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCC
Confidence 678899999987756678999999999999999998866 5666666666666666555544444332222221111110
Q ss_pred cC-CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 252 AA-PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.. ....+..+.+++++.+||.+||+.||.+|||++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00 00122334678999999999999999999999999999997
No 28
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.1e-48 Score=333.35 Aligned_cols=282 Identities=49% Similarity=0.856 Sum_probs=232.0
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 58899999999999999999999999999999976554444445667899999999999999999999999999999999
Q ss_pred ccccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+.+++.+.+.... ..+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+...+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH 160 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence 9999988886543 56899999999999999999999999999999999999999999999999999876544444444
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh-c
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY-Q 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (314)
..+++.|+|||.+.+...++.++|+||||+++++|++|.+||................+......|+........... .
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (285)
T cd07861 161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP 240 (285)
T ss_pred CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcc
Confidence 566888999999876566789999999999999999999999988877777777776665555555443333222111 1
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.............+++++.++|.+||+.||++|||+.++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 241 KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 111111222344579999999999999999999999999999997
No 29
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.4e-48 Score=339.90 Aligned_cols=261 Identities=30% Similarity=0.463 Sum_probs=221.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-chhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|.++++||+|+||.||+|+.+.+|+.||+|++++....... ......|-.+|...++|.||+++..|++..+.|+|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 47899999999999999999999999999999999987643322 22445688888888999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC-----
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----- 163 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~----- 163 (314)
|||++| ++.+++...+ .+++..++.++.+++.|+..||+.|++|+||||+|+||+..|.+||+|||+|.-...
T Consensus 220 MEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred EEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhh
Confidence 999996 7888887655 699999999999999999999999999999999999999999999999999943211
Q ss_pred -----------------CCCc-------------------------ccccccCccccCcccccCccCCCCcchHhhHHHH
Q 021299 164 -----------------PDRR-------------------------FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCI 201 (314)
Q Consensus 164 -----------------~~~~-------------------------~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~l 201 (314)
.... ....+|||-|+|||++.+ ..++..+|.||||||
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~I 377 (550)
T KOG0605|consen 299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCI 377 (550)
T ss_pred hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHH
Confidence 0000 013478899999999988 669999999999999
Q ss_pred HHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC
Q 021299 202 FAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA 281 (314)
Q Consensus 202 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 281 (314)
+|||+.|.+||.+.++.++...+..-..... + +....+++++++||.+||+ ||++
T Consensus 378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---f---------------------P~~~~~s~eA~DLI~rll~-d~~~ 432 (550)
T KOG0605|consen 378 MYEMLVGYPPFCSETPQETYRKIVNWRETLK---F---------------------PEEVDLSDEAKDLITRLLC-DPEN 432 (550)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---C---------------------CCcCcccHHHHHHHHHHhc-CHHH
Confidence 9999999999999999999999876532211 1 1112458999999999999 9999
Q ss_pred CCC---HHHHhcCccccccC
Q 021299 282 RIT---AQQALEHRFAKSFN 298 (314)
Q Consensus 282 Rps---~~ell~h~~~~~~~ 298 (314)
|.. ++||..||||+.++
T Consensus 433 RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 433 RLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred hcCcccHHHHhcCCccccCC
Confidence 986 89999999999884
No 30
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.2e-48 Score=343.79 Aligned_cols=287 Identities=38% Similarity=0.628 Sum_probs=224.9
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----CeEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----GNLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 87 (314)
+|++.+.||+|++|.||++.++.+|..|++|.+............+.+|+++++.++||||+++.+++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 68999999999999999999999999999999875433333334567899999999999999999987432 3589
Q ss_pred EEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-
Q 021299 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~- 166 (314)
++|||++++|.+.+.... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+........
T Consensus 81 lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 999999999988886544 589999999999999999999999999999999999999999999999999975432211
Q ss_pred --cccccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 167 --RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 167 --~~~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
......+++.|+|||.+.+. ..++.++||||||+++|+|++|.+||...........+....+...+..+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 12345688999999988642 467899999999999999999999998887777666666655544433222111100
Q ss_pred c---hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 244 D---YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 244 ~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
. ..........+.....+.+++.+.+++.+||+.||++|||++|+++||||+.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~ 299 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKV 299 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence 0 00111111222333345678999999999999999999999999999999987653
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-48 Score=330.69 Aligned_cols=270 Identities=27% Similarity=0.339 Sum_probs=226.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+.|++...||.|..++||+|+....++.|+||++........ ...+.+|++.++.++||||++.+..|..+...|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 4789999999999999999999999999999999998877665 457789999999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
++|. |++++.+... ...+++..+..+.+++++||.|||++|.+|||||+.|||++.+|.|+|+|||.+..+.......
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 9998 5888888764 4469999999999999999999999999999999999999999999999999987664433222
Q ss_pred ----cccccCccccCccccc-CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 169 ----THQVFARWYRAPELLF-GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 169 ----~~~~~~~~y~sPE~~~-~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
....|+++|+|||++. .-..|+.|+||||+|++..||.+|..||..-.+...+-.-.++...... ....+
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-----t~~~~ 258 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-----TSGLD 258 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-----cccCC
Confidence 3458999999999954 3355899999999999999999999999988777766554443221111 00000
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.. -....+..++++|..||+.||++|||++++|+|+||++...
T Consensus 259 ~d-------------~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 259 KD-------------EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred hH-------------HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 00 01234678999999999999999999999999999998753
No 32
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=296.98 Aligned_cols=286 Identities=47% Similarity=0.823 Sum_probs=264.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..|...+.||+|.+|+|++++.+.+++.|++|..+.+..++.......+|+-+++.++|.||+++++....++...+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46788899999999999999999999999999999999888888889999999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
+|..+|..+..+-++.++.+.++.++.|+++|+.++|++++.|+|+||.|.+++.+|.+|+.|||+++.++-+-......
T Consensus 82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae 161 (292)
T KOG0662|consen 82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE 161 (292)
T ss_pred HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
+.|.||.+|.++++..-|+..-|+||-||++.++. .|.+.|++.+..+++.+++...+....++||....+++...+..
T Consensus 162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ 241 (292)
T KOG0662|consen 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI 241 (292)
T ss_pred eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence 99999999999999888999999999999999997 67799999999999999999999999999999988887754433
Q ss_pred ccC-CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 251 VAA-PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 251 ~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
-.. ....++.+.++..-++|++++|.-+|.+|+++++.++||||...
T Consensus 242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 322 22345567788889999999999999999999999999999854
No 33
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=331.10 Aligned_cols=261 Identities=31% Similarity=0.492 Sum_probs=214.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC--eEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--NLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~i 88 (314)
..+|...+.||+|+||+||++.+..+|..+|+|......... ...+.+|++++..++|||||++.+...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 356889999999999999999999999999999998763222 334679999999999999999999743333 6899
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceeeeCC---
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGS--- 163 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~~~~--- 163 (314)
+|||+.| +|.+++...++.++++.++.+.+||+.||+|||++|++|+||||+|||++. ++.+||+|||.+.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 9999985 888888877668999999999999999999999999999999999999999 79999999999987653
Q ss_pred CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCC-CcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 164 ~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.........||+.|+|||++..+.....++|||||||++.+|+||.+||... ........+... . .
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~--~-~---------- 240 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE--D-S---------- 240 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc--C-C----------
Confidence 1222345789999999999985333446999999999999999999999874 333322222211 1 1
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.+.+...+++++++++.+||..||.+|||++++|+|||.++...
T Consensus 241 -------------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 241 -------------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred -------------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 11233457999999999999999999999999999999987544
No 34
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.2e-47 Score=330.01 Aligned_cols=279 Identities=40% Similarity=0.750 Sum_probs=224.7
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc---CCCCeeeeeceecc-----CC
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPH-----KG 84 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~-----~~ 84 (314)
+|++.+.||+|++|+||++.++.+|+.+++|.+..............+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58999999999999999999999999999999876544333333445666666655 79999999998753 34
Q ss_pred eEEEEEecccccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 85 NLHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
..++++|++++++.+.+.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 689999999999988887643 4589999999999999999999999999999999999999999999999999976532
Q ss_pred CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
. .......+++.|+|||.+.+ ..++.++|+||||+++|+|++|.+||......+....+....+......|+......
T Consensus 161 ~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 161 Q-MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred c-ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 2 22234467888999999876 568999999999999999999999999988888888888776665555555332211
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
. ..+............+.++..+.++|.+||+.||++|||+.|++.||||
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 239 R-GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred c-cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1 1111222233334456788999999999999999999999999999998
No 35
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-49 Score=317.62 Aligned_cols=264 Identities=30% Similarity=0.503 Sum_probs=231.7
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc--hh----hHHHHHHHhhc-CCCCeeeeecee
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--FT----ALREIKLLKEL-KSPHIIELIDAF 80 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~--~~----~~~e~~~l~~l-~~~~i~~~~~~~ 80 (314)
+.+.+.|...+.||.|..++|-++.++.+|+.+++|++.......... .+ -.+|+.+|+++ .||+|.++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 456788999999999999999999999999999999997765433221 11 22689999998 599999999999
Q ss_pred ccCCeEEEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 81 PHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 81 ~~~~~~~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
+.+.+.++|+|.|+ |.|.+++.+.- .+++...+.|++|++.|++|||.++|+|+||||+||+++++.+++|+|||+++
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceee
Confidence 99999999999998 78999887654 59999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCcccccccCccccCcccccCc-----cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGA-----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~-----~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
.. .+.......+|||.|+|||.++.. ..|+...|+|++|+|||.|+.|.+||=.....-.+..++++......+
T Consensus 172 ~l-~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp 250 (411)
T KOG0599|consen 172 QL-EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP 250 (411)
T ss_pred cc-CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc
Confidence 87 345566778999999999998642 347899999999999999999999998877778888888887777777
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.|.+ +++..++||.+||+.||++|.|++|+|.||||+++
T Consensus 251 eWad------------------------is~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 251 EWAD------------------------ISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred chhh------------------------ccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 7664 49999999999999999999999999999999766
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-48 Score=345.37 Aligned_cols=264 Identities=28% Similarity=0.451 Sum_probs=233.7
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecC-CcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG-KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
-.+=|++.+-||.|+.|.|-+|++..+|+..|||.+.+. .........+..|+-+++.+.||||+.++++|++..+.|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 356789999999999999999999999999999999877 3334444567799999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
|.||+.| .|.+++..++ ++++..++.++.||+.|+.|+|..+|+|+||||+|++++..+++||+|||.|... .+...
T Consensus 90 vlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~gkl 167 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-VPGKL 167 (786)
T ss_pred EEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc-cCCcc
Confidence 9999985 8888888665 5899999999999999999999999999999999999999999999999999875 34445
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+|.|-|.+||++.+..+.+.++||||.|||||.|++|..||.+.+.-..+..+.++....+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP--------------- 232 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP--------------- 232 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC---------------
Confidence 56678999999999999977789999999999999999999999998888888888776643322
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcceee
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFVF 303 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~ 303 (314)
..+++++++||.+||+.||.+|+|.+||++|||+.+..+..+.
T Consensus 233 -------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 233 -------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred -------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 3579999999999999999999999999999999998765543
No 37
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-47 Score=339.03 Aligned_cols=285 Identities=33% Similarity=0.512 Sum_probs=222.0
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
.+.++|++.+.||+|+||.||++.+..+|..+++|.+............+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 567999999999999999999999999999999999976544444445667899999999999999999988543
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+++|||+++++...+.. .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 35799999999998887643 37899999999999999999999999999999999999999999999999997543
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC--
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA-- 240 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (314)
.. .......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+....+....+......+....
T Consensus 175 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 175 TN-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred cC-ccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 22 22234567888999999976 668899999999999999999999999888777666665554433321111000
Q ss_pred ------------cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 241 ------------YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 241 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.............+.........++++.+||.+||+.||++|||++|+|+||||+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 322 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY 322 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence 0000000000001111112223578899999999999999999999999999998654
No 38
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.4e-48 Score=352.23 Aligned_cols=282 Identities=33% Similarity=0.562 Sum_probs=220.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--------
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------- 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 82 (314)
.++|++.+.||+|+||+||+|.+..+++.||+|++..... ...+|+.+++.++||||+++.+++..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ------YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 4679999999999999999999999999999998854321 23479999999999999999887632
Q ss_pred CCeEEEEEecccccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-cEEEeeccce
Q 021299 83 KGNLHLVFEFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLA 158 (314)
Q Consensus 83 ~~~~~iv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-~~~l~df~~~ 158 (314)
....+++|||+++++...+.. ....+++..++.++.||+.||+|||++|++|+||||+||+++.++ .+||+|||++
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 225679999999988777653 455799999999999999999999999999999999999998765 7999999999
Q ss_pred eeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
....... ......+++.|+|||.+.+...++.++|||||||++|+|++|.+||.+....+.+..+....+......+..
T Consensus 219 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 219 KNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred hhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 8653322 223456788999999987756789999999999999999999999999988888888887766554332221
Q ss_pred cCcccchhhhccccCCCCC-ccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 239 LAYLPDYVEYQYVAAPPLR-SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
....-....+.......+. .+....++++.+||.+||+.||.+|||+.|++.||||+.+.+
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 1000000000001111111 122346889999999999999999999999999999987754
No 39
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.8e-47 Score=330.96 Aligned_cols=286 Identities=66% Similarity=1.125 Sum_probs=240.3
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc---cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+|.+.+.||+|++|.||++.+..+|+.+++|.+...... ......+.+|+++++.++|+||+++++++.+++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 588999999999999999999989999999999876543 22333456899999999999999999999999999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|||+.|+|.+++......+++..+..++.||+.||.+||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT 160 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence 99997799998876655799999999999999999999999999999999999999999999999999987755444444
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+...++.++|+||||+++++|++|.+||......+....+....+......++............
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T cd07841 161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK 240 (298)
T ss_pred ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccc
Confidence 45667889999998765678999999999999999999999999888888888877776666665565544444333333
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.....+........+.++.++|.+||..||++|||++|++.||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 3333444445567789999999999999999999999999999999753
No 40
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=7.8e-47 Score=329.90 Aligned_cols=288 Identities=41% Similarity=0.759 Sum_probs=235.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~i 88 (314)
.++|++.+.||.|++|.||++.++.+|+.|++|.+..............+|+++++.++|+|++++.+++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 4789999999999999999999999999999999976554443333456899999999999999999988654 56899
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||||+++++.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 165 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM 165 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC
Confidence 99999999998888766779999999999999999999999999999999999999999999999999998765443333
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+..+....+....+......++.....+.....
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (309)
T cd07845 166 TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF 245 (309)
T ss_pred CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccc
Confidence 44455778999999877567899999999999999999999999999999988888887776666555544333322111
Q ss_pred cc--ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 249 QY--VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.. .............++++.++|.+||+.||++|||+++++.||||++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 246 TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred cccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 11 111111222334688999999999999999999999999999998553
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-47 Score=332.37 Aligned_cols=254 Identities=26% Similarity=0.349 Sum_probs=215.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|+||++.++.+|+.+++|.+...... ......+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 4799999999999999999999999999999999754322 122335668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+.| +|.+++...+ .+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++...... ..
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~ 156 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TW 156 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---cc
Confidence 99985 7888776544 6899999999999999999999999999999999999999999999999999765322 22
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...........+.....
T Consensus 157 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-------------------- 215 (291)
T cd05612 157 TLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-------------------- 215 (291)
T ss_pred cccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--------------------
Confidence 3467889999999876 5678999999999999999999999988877666666544311
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
.+...+++.+.+||.+||+.||.+||+ ++++++||||+.++
T Consensus 216 --------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 216 --------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred --------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 011235889999999999999999995 99999999998764
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-48 Score=331.25 Aligned_cols=262 Identities=27% Similarity=0.417 Sum_probs=220.7
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC------------cchhhHHHHHHHhhcCCCCeeeee
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHIIELI 77 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~~ 77 (314)
..++|++.+.||+|.+|.|-+|++..+++.||+|++.+...... ...+..+|+.+++++.|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 46899999999999999999999999999999999977643211 113566899999999999999999
Q ss_pred ceec--cCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeec
Q 021299 78 DAFP--HKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF 155 (314)
Q Consensus 78 ~~~~--~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df 155 (314)
.+.. ..+.+|+|+|||..+-..+.-..+.-+++.+++.++++++.||+|||.+||+||||||+|+|++.+|.|||+||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence 9985 45689999999996655555444434899999999999999999999999999999999999999999999999
Q ss_pred cceeeeCC-----CCCcccccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHh
Q 021299 156 GLARIFGS-----PDRRFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227 (314)
Q Consensus 156 ~~~~~~~~-----~~~~~~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~ 227 (314)
|.+..... .........|||+|+|||...++ ...+.+.|||||||+||-|+.|+.||.+....++...+...
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~ 334 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND 334 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC
Confidence 99987621 22223346899999999998762 34578999999999999999999999999999998888654
Q ss_pred hCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
-...+. .+.+.+.+++||.+||++||++|+++.+|..|||...-
T Consensus 335 pL~fP~--------------------------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 335 PLEFPE--------------------------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cccCCC--------------------------cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 222211 23468899999999999999999999999999999866
No 43
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-47 Score=333.62 Aligned_cols=263 Identities=35% Similarity=0.563 Sum_probs=235.7
Q ss_pred cHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcC-CCCeeeeeceeccCC
Q 021299 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (314)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 84 (314)
...+.+.|.+.+.||.|.||.||++.++.+|+.+|+|.+.+...... ......+|+++++++. ||||+.+.+.|++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 45677899999999999999999999999999999999988765433 3346679999999998 999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC----CcEEEeecccee
Q 021299 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGLAR 159 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~----~~~~l~df~~~~ 159 (314)
.+++|||++.| .|.+.+... .+++..+..++.|++.++.|||+.|++|+||||+|+++... +.++++|||++.
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999995 899988877 39999999999999999999999999999999999999543 479999999999
Q ss_pred eeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCc
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
.... .......+||+.|+|||++.. ..++...||||+|+++|.|++|.+||...........+..+........|+
T Consensus 188 ~~~~-~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~-- 263 (382)
T KOG0032|consen 188 FIKP-GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWD-- 263 (382)
T ss_pred EccC-CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcc--
Confidence 8866 666778899999999999976 789999999999999999999999999999888888887776655555554
Q ss_pred CcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.++..+.++|++||..||.+|+|+.++|+|||++..
T Consensus 264 ----------------------~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 264 ----------------------DISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred ----------------------ccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 569999999999999999999999999999999976
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-47 Score=336.86 Aligned_cols=251 Identities=26% Similarity=0.386 Sum_probs=209.8
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
+.||+|+||.||++.++.+|+.+++|++...... ........+|+++++.++||||+++.+++..++..++||||+.|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999999764321 22223456899999999999999999999999999999999986
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCc
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 175 (314)
+|...+.. .+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............|++
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 159 (323)
T cd05571 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence 66666654 44689999999999999999999999999999999999999999999999999875433333334456899
Q ss_pred cccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCC
Q 021299 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (314)
Q Consensus 176 ~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-------------------------- 212 (323)
T cd05571 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------------------------- 212 (323)
T ss_pred cccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------------------------
Confidence 9999999876 6689999999999999999999999987766555544432210
Q ss_pred CCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 256 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.+...+++++.+||.+||..||++|| ++.++++||||++++
T Consensus 213 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 213 --RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 11234689999999999999999999 899999999998864
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-48 Score=336.65 Aligned_cols=258 Identities=28% Similarity=0.474 Sum_probs=238.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe-EEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~iv 89 (314)
.++|..++++|.|+||.+++++++..++.+++|.+..............+|+.+++++.||||+.+.+.|.+++. .+|+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 478999999999999999999999999999999999988888777788899999999999999999999988887 9999
Q ss_pred Eecccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
|+||+| ++.+.+.+++ ..++++.+..|+.|++.|+.|||+++|.|+|||+.|||++.++.|+|+|||+++.++.....
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 999996 8888887665 67999999999999999999999999999999999999999999999999999999887777
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+||+.|++||.+.+ .+|+.++|||||||++|+|++-+++|.+.+-.....++......+.+.
T Consensus 163 a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~------------- 228 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS------------- 228 (426)
T ss_pred hheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc-------------
Confidence 788999999999999987 899999999999999999999999999999999999998876444443
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
..+.+++.||..||..+|..||++.++|.+|.++-
T Consensus 229 --------------~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 229 --------------MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred --------------cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 34999999999999999999999999999998873
No 46
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.5e-47 Score=326.37 Aligned_cols=282 Identities=50% Similarity=0.872 Sum_probs=231.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++++.||.|++|.||++.++.+|+.+++|.+............+.+|++++++++||||+++++++.+++..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 48899999999999999999999999999999876654444445677899999999999999999999999999999999
Q ss_pred ccccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 93 METDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 93 ~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
+.+++...+... ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+...+.........
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (284)
T cd07860 81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 160 (284)
T ss_pred cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence 998988888654 4568999999999999999999999999999999999999999999999999987664443333444
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh-hhcc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV-EYQY 250 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (314)
.+++.|+|||.+.+...++.++|+||||+++|+|++|..||..........++....+......++.....+... .+..
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd07860 161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK 240 (284)
T ss_pred cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence 567889999998775667899999999999999999999999888888888877776665554444322221111 1111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
..........+.+++++.++|.+||+.||++|||+++++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 241 WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 11122223345678999999999999999999999999999998
No 47
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.7e-47 Score=336.14 Aligned_cols=285 Identities=32% Similarity=0.514 Sum_probs=224.3
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
.+.++|.+.+.||+|+||.||++.+..+++.+++|.+..............+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 457999999999999999999999999999999999876544444444566899999999999999999987533
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+++|||+++++...+.. .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...+
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 35799999999998887753 48899999999999999999999999999999999999999999999999997653
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. .......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+....+...++.+......
T Consensus 171 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 171 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred Cc-cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 32 22234567889999999876 66889999999999999999999999988877777777666655443322211100
Q ss_pred c--------------chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 243 P--------------DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 243 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
. ..........+.........+.++.+||.+||+.||++|||+.|+|+||||+.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 0 0000000001111112233567899999999999999999999999999998664
No 48
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-46 Score=336.34 Aligned_cols=286 Identities=32% Similarity=0.513 Sum_probs=225.6
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
.+.++|.+.+.||+|++|.||.+.+..+++.+++|++............+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 357899999999999999999999999999999999976544444445667899999999999999999887433
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...|+||||+++++...+.. .+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||++...+
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 35799999999998887753 37889999999999999999999999999999999999999999999999997653
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. .......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+....+....+...+..++.....
T Consensus 178 ~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 178 TS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred CC-CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 32 22234567889999999977 66899999999999999999999999998888888887776665443322211110
Q ss_pred cc--------------hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 243 PD--------------YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 243 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.. .........+.........+..+.+||.+||+.||.+|||+.|+|+||||+.+.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 00 0000000011111112234678999999999999999999999999999987644
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-47 Score=334.84 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=215.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|.+.+.||+|++|.||++.++.+|+.+++|.+..... .......+.+|+.+++.++||||+++++++.+++..+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 5889999999999999999999999999999999976532 122234566899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||+.| +|.+.+... +.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 97 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT--- 172 (329)
T ss_pred EcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---
Confidence 999985 777777654 468999999999999999999999999999999999999999999999999998653322
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+..... .+
T Consensus 173 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----~~------------ 234 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL-----KF------------ 234 (329)
T ss_pred ceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc-----CC------------
Confidence 23468889999999876 5678999999999999999999999988776666555543211 01
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCcccccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSF 297 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~ 297 (314)
...+++.+.+||.+||+.||.+||+ ++++++||||++.
T Consensus 235 -----------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 235 -----------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred -----------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 1235889999999999999999997 7999999999874
No 50
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.5e-46 Score=322.94 Aligned_cols=283 Identities=41% Similarity=0.711 Sum_probs=225.3
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++.++.+|+.+++|.+............+.+|+.+++.++|+|++++++++......+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 57999999999999999999999899999999987654444444456789999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|+++++++.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.............
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY 160 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence 99998777776666679999999999999999999999999999999999999999999999999998765443333344
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCC---CcCcccchhhh
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP---DLAYLPDYVEY 248 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 248 (314)
.++..|+|||.+.+...++.++|+||||+++++|++|..||......+....+....+...+.... ...........
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07847 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP 240 (286)
T ss_pred ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence 567889999998775667899999999999999999999998887777666655544433221100 00000000000
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......+.....+.++..+.+|+.+||+.||++||++.|++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0011111122345678999999999999999999999999999998
No 51
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-46 Score=326.74 Aligned_cols=284 Identities=44% Similarity=0.829 Sum_probs=235.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~i 88 (314)
.++|++.+.||.|++|.||+|.+..+++.+++|.++...........+.+|+.+++.++||||+++.+++... +..++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 4689999999999999999999998999999999987655443334556899999999999999999988766 89999
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
++||++++|.+.+......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 163 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY 163 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc
Confidence 99999999999887766679999999999999999999999999999999999999999999999999998775543444
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....+++.|+|||.+.+...++.++|+||||+++++|++|.+||...........+....+...+..|+.....+.....
T Consensus 164 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (293)
T cd07843 164 TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK 243 (293)
T ss_pred ccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccc
Confidence 45567888999999877566789999999999999999999999998888888888877776666655544333322211
Q ss_pred ccc--cCCCCCccCCC--CCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYV--AAPPLRSLFPS--ASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~--~~~~~~~~~~~--~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
... .........+. +++.+.++|++||+.||++|||++|++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 244 TFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 111 11111222233 48899999999999999999999999999998
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-46 Score=325.32 Aligned_cols=261 Identities=25% Similarity=0.361 Sum_probs=214.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.|+..+.||+|+||.||++.+..+|+.+++|.+....... .....+.+|+++++.++|++++++.+++.+++..++++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3788999999999999999999999999999987654322 222345689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|+.| +|...+... ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVR 159 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-Ceec
Confidence 9985 676666543 346899999999999999999999999999999999999999999999999999875322 2233
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...........+........
T Consensus 160 ~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------- 221 (285)
T cd05631 160 GRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ----------------- 221 (285)
T ss_pred CCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-----------------
Confidence 4568899999999976 6789999999999999999999999987655433333322211111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccCc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFNG 299 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~~ 299 (314)
......+++++.+|+.+||+.||.+||+ ++++++||||+.++.
T Consensus 222 -------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 222 -------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred -------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 1122346899999999999999999997 899999999999863
No 53
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.8e-47 Score=340.11 Aligned_cols=285 Identities=34% Similarity=0.561 Sum_probs=226.1
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-----eEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 87 (314)
+|.+.+.||+|++|.||++.+..+|+.||+|.+............+.+|+.+++.++|+||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999999999999998654333333345678999999999999999999987766 789
Q ss_pred EEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-C
Q 021299 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-R 166 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~ 166 (314)
+|+||+.+++...+... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... .
T Consensus 81 lv~e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 99999999988887654 368999999999999999999999999999999999999999999999999998653322 1
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc-h
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-Y 245 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 245 (314)
......+++.|+|||.+.+...++.++||||||+++|+|++|..||......+....+....+......+........ .
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 223345788899999998756689999999999999999999999999988888888877766554433221100000 0
Q ss_pred hhhccccCCC---CCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 VEYQYVAAPP---LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 ~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
........+. ........++++.+||.+||+.||++|||++|+++||||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 0000000000 1122345688999999999999999999999999999999753
No 54
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.3e-47 Score=336.98 Aligned_cols=286 Identities=34% Similarity=0.583 Sum_probs=226.8
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
++.++|.+.+.||.|+||+||++.+..++..||+|.+............+.+|+++++.++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 467899999999999999999999999999999999876543333334566899999999999999999987433
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+++++++++++...+... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 357899999988888777543 49999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. .....+++.|+|||.+.+...++.++||||||+++|+|++|..||...+..+....+....+...+..+......
T Consensus 170 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 170 DE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred CC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 32 234567889999999877567899999999999999999999999988888877777766555443322211111
Q ss_pred cchh---hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 243 PDYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 243 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.... .........+.......++.+.+||.+||+.||.+|||+.|+++||||..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 0000 00000111122233456788999999999999999999999999999997643
No 55
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.5e-46 Score=325.85 Aligned_cols=284 Identities=45% Similarity=0.789 Sum_probs=230.7
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCe-----
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGN----- 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~----- 85 (314)
++|++.+.||+|++|.||++.+..+++.|++|.+............+.+|+.+++.+. |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 5799999999999999999999999999999998776544444456778999999995 6999999998866554
Q ss_pred EEEEEecccccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceee
Q 021299 86 LHLVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (314)
Q Consensus 86 ~~iv~e~~~g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~ 160 (314)
.|++|||+++++.+++... ...+++..++.++.||+.||.|||++|++|+||+|+||+++. ++.++|+|||.+..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 8999999999998888653 235899999999999999999999999999999999999998 88999999999986
Q ss_pred eCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
............+++.|+|||.+.+...++.++|+||||+++|+|++|..||...........+...........++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 54433333444567889999998765667999999999999999999999999888888887777766655555554433
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
....................+.+++++.++|.+||..||.+||+++|++.||||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 3333222222222222333456799999999999999999999999999999985
No 56
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-46 Score=323.12 Aligned_cols=283 Identities=48% Similarity=0.887 Sum_probs=235.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||+|++|.||++.+..+|..+++|.+............+.+|+.++++++|+|++++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 58999999999999999999998999999999987654444445677899999999999999999999999999999999
Q ss_pred ccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-ccccc
Q 021299 93 METDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQ 171 (314)
Q Consensus 93 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~ 171 (314)
++++|.+.+......+++..++.++.||+.||++||+.|++|+||+|+||+++.++.++|+|||.+........ .....
T Consensus 81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 160 (286)
T cd07832 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ 160 (286)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence 97799998887767799999999999999999999999999999999999999999999999999987644321 23345
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc-
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY- 250 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 250 (314)
.++..|+|||.+.+...++.++|+||||+++++|++|.+||....+......+....+...+..|+.............
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07832 161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFP 240 (286)
T ss_pred cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCC
Confidence 6788899999987756679999999999999999999999988888888888877777666655554333322211111
Q ss_pred -ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 251 -VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 251 -~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
..........+..+.++.++|.+||..+|++||+++++++||||.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 111112334456789999999999999999999999999999984
No 57
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.3e-47 Score=337.86 Aligned_cols=260 Identities=30% Similarity=0.480 Sum_probs=218.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||+|++|+||+|.+..+|+.||+|++....... .....+.+|++++..++|+||+++++++.++++.++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999997654322 23345668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC----
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~---- 165 (314)
||+.| +|.+.+... +.+++..++.++.||+.||++||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 99975 888887765 569999999999999999999999999999999999999999999999999997654333
Q ss_pred -------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHH
Q 021299 166 -------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ 220 (314)
Q Consensus 166 -------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~ 220 (314)
.......|++.|+|||.+.+ ..++.++|||||||++|+|++|..||........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 22334568899999999977 5789999999999999999999999998887666
Q ss_pred HHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-HHHHhcCccccccC
Q 021299 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRFAKSFN 298 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~ell~h~~~~~~~ 298 (314)
...+........ .+ ....+++++.+||.+||. ||.+||+ ++++++||||+++.
T Consensus 239 ~~~i~~~~~~~~---~p---------------------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~ 292 (350)
T cd05573 239 YNKIINWKESLR---FP---------------------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGID 292 (350)
T ss_pred HHHHhccCCccc---CC---------------------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCC
Confidence 666544211111 00 011258999999999997 9999999 99999999999763
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-47 Score=339.87 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=224.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~i 88 (314)
.++|+++++||.|.||+|+++..+.+++.||||++++...-.. .....+.|.+++...+ ||.++.++..|+...+.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 4789999999999999999999999999999999998764333 3334557888887775 9999999999999999999
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||||+.|+.... ....+.+++..++-++..|+.||.|||++||+|||||.+||++|.+|.+||+|||+|+..-......
T Consensus 447 vmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~T 525 (694)
T KOG0694|consen 447 VMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRT 525 (694)
T ss_pred EEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCcc
Confidence 999999755222 2334569999999999999999999999999999999999999999999999999998765455566
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....|||.|+|||++.+ ..|+.+.|.|+|||+||+|+.|..||.+.+..+....+...... +
T Consensus 526 sTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~-----y------------ 587 (694)
T KOG0694|consen 526 STFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR-----Y------------ 587 (694)
T ss_pred ccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC-----C------------
Confidence 77889999999999988 78999999999999999999999999999999999888654211 1
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
+..++.++.++++++|..+|++|... ++|..||||+.++
T Consensus 588 -----------P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 588 -----------PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred -----------CCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 12469999999999999999999976 7799999999985
No 59
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.7e-46 Score=323.36 Aligned_cols=289 Identities=48% Similarity=0.842 Sum_probs=235.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||.|++|+||++.++.+|+.+++|.+............+.+|+++++.++|+||+++++++.++...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57999999999999999999999999999999987654444444566789999999999999999999999999999999
Q ss_pred cccccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|+++++.+.+.... ..+++..++.++.||+.||++||++|++|+||+|+||+++. ++.++|+|||.+...+.......
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFT 161 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccc
Confidence 99999888876543 34688899999999999999999999999999999999985 45799999999976544433334
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+...++.++|+||||+++|+|++|.+||......+....+....+......|.....++......
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF 241 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence 45667889999998775668899999999999999999999999888888888877776666655555443333321111
Q ss_pred cc-cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 250 YV-AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 250 ~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.. .........+.+++++.+++.+||+.+|++||++.++++||||..+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~~ 293 (294)
T PLN00009 242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDA 293 (294)
T ss_pred ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhcC
Confidence 11 1111222345678999999999999999999999999999999987653
No 60
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.9e-47 Score=338.18 Aligned_cols=284 Identities=33% Similarity=0.554 Sum_probs=230.6
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-C-----CCeeeeeceec
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-S-----PHIIELIDAFP 81 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~-----~~i~~~~~~~~ 81 (314)
+-|.-+|.+.++||+|+||.|.+|.+..+++.||||+++....- ......|+.+|..++ | -|+|++.++|.
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f---~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~ 258 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF---LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY 258 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH---HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc
Confidence 33445999999999999999999999999999999999865432 224457999999997 3 58999999999
Q ss_pred cCCeEEEEEecccccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC--cEEEeeccce
Q 021299 82 HKGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG--QLKLADFGLA 158 (314)
Q Consensus 82 ~~~~~~iv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~--~~~l~df~~~ 158 (314)
..++.|+|+|.++-+|.++++.. -.+++...++.++.||+.||..||+.||+|+||||+|||+...+ .+||+|||.+
T Consensus 259 fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 259 FRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred cccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccc
Confidence 99999999999999999999865 34699999999999999999999999999999999999997654 7999999999
Q ss_pred eeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
+.....- ...+-+..|.|||++.+ .+|+.+-||||||||+.||++|.+.|.+.++.++++.|++.++.+++.-+..
T Consensus 339 c~~~q~v---ytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 339 CFESQRV---YTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred cccCCcc---eeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9764322 25566788999999998 8899999999999999999999999999999999999999998766543331
Q ss_pred cCcccchhhh------------------------------ccccCC----CCCccCC-CCCHHHHHHHhhhcccCCCCCC
Q 021299 239 LAYLPDYVEY------------------------------QYVAAP----PLRSLFP-SASDDALDLLSKMFTYDPKARI 283 (314)
Q Consensus 239 ~~~~~~~~~~------------------------------~~~~~~----~~~~~~~-~~~~~~~~li~~~l~~dp~~Rp 283 (314)
........+. .....+ .+..... .....+.+++++||++||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 1111000000 000011 1112222 3456689999999999999999
Q ss_pred CHHHHhcCccccccC
Q 021299 284 TAQQALEHRFAKSFN 298 (314)
Q Consensus 284 s~~ell~h~~~~~~~ 298 (314)
|+.|+|+||||..-.
T Consensus 495 tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 495 TPAQALNHPFLTGTS 509 (586)
T ss_pred CHHHHhcCccccccc
Confidence 999999999999543
No 61
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1e-46 Score=332.78 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=215.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCC-cEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~-~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
.++|.+.+.||+|++|.||+|.+..++ ..+++|.+...... ......+.+|+.+++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 578999999999999999999866554 68999998754322 2223356689999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
||||+.| +|.+.+... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~--- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR--- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC---
Confidence 9999975 777777654 46899999999999999999999999999999999999999999999999999875432
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.....|++.|+|||.+.+ ..++.++|+||||+++|+|++|.+||...+.......+......
T Consensus 185 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~----------------- 246 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY----------------- 246 (340)
T ss_pred cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-----------------
Confidence 234568889999999876 56789999999999999999999999988777666665443211
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
....+++.+.++|++||+.||.+|+ +++++++||||++++
T Consensus 247 -----------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 247 -----------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred -----------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 1123588999999999999999995 899999999999875
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-46 Score=331.86 Aligned_cols=261 Identities=28% Similarity=0.408 Sum_probs=217.3
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|.||+|.+..+++.|++|++....... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997653221 22335668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|.+++... +.+++..+..++.||+.||.+||++|++|+||||+||+++.++.++|+|||++..... ...
T Consensus 81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~ 156 (333)
T cd05600 81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YAN 156 (333)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccC
Confidence 99985 777777644 4689999999999999999999999999999999999999999999999999976533 234
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++||||||+++|+|++|..||......+....+.............
T Consensus 157 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------------ 223 (333)
T cd05600 157 SVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD------------ 223 (333)
T ss_pred CcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCC------------
Confidence 4568899999999977 578999999999999999999999998887766665554321111100000
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.....+++++.+||.+||..+|++||+++++++||||+..
T Consensus 224 --------~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 224 --------DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred --------ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 0012468999999999999999999999999999999976
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-46 Score=335.26 Aligned_cols=278 Identities=25% Similarity=0.340 Sum_probs=215.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+++.||+|++|.||++.+..+++.+|+|.... ....+|++++++++||||+++++++..+...++++|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 679999999999999999999999999999997532 234589999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC-CCcccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP-DRRFTH 170 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~-~~~~~~ 170 (314)
++.+++...+.... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...... ......
T Consensus 164 ~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 242 (391)
T PHA03212 164 RYKTDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG 242 (391)
T ss_pred cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence 99999988887654 5899999999999999999999999999999999999999999999999999653222 223334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC-------cHHHHHHHHHhhCCCCCCCCCCcCc--
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-------DIDQLGKIFAAFGTATPSQWPDLAY-- 241 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-- 241 (314)
..||+.|+|||++.+ ..++.++||||||+++|+|++|..||-... .......+....+..+. .++....
T Consensus 243 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~-~~~~~~~~~ 320 (391)
T PHA03212 243 WAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN-EFPIDAQAN 320 (391)
T ss_pred ccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh-hcCcchhHH
Confidence 578999999999876 668999999999999999999997664322 23445555555444322 2221100
Q ss_pred ccchh-hhcc--ccCC---CCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 242 LPDYV-EYQY--VAAP---PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 242 ~~~~~-~~~~--~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
..... .... ...+ +.......++.++.+||.+||+.||.+|||++|+|+||||+.+...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 00000 0000 0000 0001112357789999999999999999999999999999987543
No 64
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.5e-46 Score=321.31 Aligned_cols=283 Identities=41% Similarity=0.772 Sum_probs=224.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||+|++|.||++.++.+++.|++|.+....... ....+.+|+++++.++|+||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 378999999999999999999998899999999987654322 2234568999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
||++++|.+.+......+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (291)
T cd07844 83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSN 162 (291)
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccc
Confidence 99999999988876667899999999999999999999999999999999999999999999999998754333333333
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC-cHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
..++..|+|||.+.+...++.++|+||+|+++|+|++|..||.... ..+....+....+...+..++............
T Consensus 163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence 4467789999998765667899999999999999999999997665 445555555555555454444333222111111
Q ss_pred c--ccCCCCCccCCCCC--HHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 Y--VAAPPLRSLFPSAS--DDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~--~~~~~~~~~~~~~~--~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
. .....+......++ ..+.+++.+||+.+|++|||+.+++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 1 11111222223344 889999999999999999999999999998
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-46 Score=329.26 Aligned_cols=251 Identities=26% Similarity=0.391 Sum_probs=209.4
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
+.||+|+||.||++.+..+|..|++|.+...... ......+.+|+++++.++||||+++.+.+..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999999999999999999765321 12223456799999999999999999999999999999999986
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCc
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 175 (314)
+|...+.. .+.+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............|++
T Consensus 81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 159 (323)
T cd05595 81 ELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence 66665554 34689999999999999999999999999999999999999999999999999875433333334456889
Q ss_pred cccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCC
Q 021299 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (314)
Q Consensus 176 ~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-------------------------- 212 (323)
T cd05595 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------------------------- 212 (323)
T ss_pred CcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------------------
Confidence 9999999876 5679999999999999999999999988776665555432211
Q ss_pred CCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 256 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.....+++++.++|.+||..||.+|| ++.++++||||.+..
T Consensus 213 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 213 --RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 01124689999999999999999998 899999999998764
No 66
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8e-46 Score=319.42 Aligned_cols=281 Identities=53% Similarity=0.920 Sum_probs=230.8
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
|++.+.||.|++|.||++.++.+|..+++|++............+.+|++.++.++|+|++++++++.+++..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 67899999999999999999999999999999876544444456778999999999999999999999999999999999
Q ss_pred cccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccc
Q 021299 94 ETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 94 ~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
++++.+++.... ..+++..+..++.|++.||++||+++++|+||+|+||+++.++.++|+|||.+..............
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 160 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV 160 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence 989988887654 4689999999999999999999999999999999999999999999999999976544333333445
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh-hccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 251 (314)
+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+.......+...........|+.....+.... +...
T Consensus 161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd07835 161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW 240 (283)
T ss_pred cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence 678899999887755678999999999999999999999998888777777777665555544443332222211 1111
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.........+.+++.+.++|.+||+.||++|||++|++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 2222333455678999999999999999999999999999998
No 67
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.9e-46 Score=326.82 Aligned_cols=295 Identities=42% Similarity=0.763 Sum_probs=243.2
Q ss_pred cHHHHhhccc-eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC------------cchhhHHHHHHHhhcCCCCe
Q 021299 7 SKKVADRYLK-REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------------VNFTALREIKLLKELKSPHI 73 (314)
Q Consensus 7 ~~~~~~~y~~-~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i 73 (314)
...+.++|.. .+.||+|++|+||++.+..+++.+++|++........ ....+.+|+++++.++|+||
T Consensus 3 ~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 3 SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred ccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 4567889975 4779999999999999999999999999876533221 11235689999999999999
Q ss_pred eeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEe
Q 021299 74 IELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA 153 (314)
Q Consensus 74 ~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~ 153 (314)
+++.+++..++..+++||++.|++.+.+... ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+
T Consensus 83 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 83 MGLVDVYVEGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred eeeeEEEecCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999999999999998888654 358999999999999999999999999999999999999999999999
Q ss_pred eccceeeeCC--------------CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHH
Q 021299 154 DFGLARIFGS--------------PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219 (314)
Q Consensus 154 df~~~~~~~~--------------~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~ 219 (314)
|||.+..... .........+++.|+|||.+.+...++.++|+||||+++++|++|.+||...+..+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999976641 11122233457789999998775667999999999999999999999999999888
Q ss_pred HHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
....+....+......|+.....+....................++++.++|.+||+.+|++||+++|++.||||+....
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence 88888888777777667665544444433333444444455667899999999999999999999999999999998876
Q ss_pred cee
Q 021299 300 VFV 302 (314)
Q Consensus 300 ~~~ 302 (314)
...
T Consensus 322 ~~~ 324 (335)
T PTZ00024 322 PCD 324 (335)
T ss_pred CCC
Confidence 543
No 68
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-46 Score=327.11 Aligned_cols=249 Identities=28% Similarity=0.406 Sum_probs=208.1
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||+|+||+||++.+..+++.+++|.+..... .......+..|+.+++.++||||+++.+++...+..++||||++| +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999999999999999999875432 222233556899999999999999999999999999999999986 77
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccc
Q 021299 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (314)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y 177 (314)
.+.+... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|++.|
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 159 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 159 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence 7777654 468999999999999999999999999999999999999999999999999997643333333445689999
Q ss_pred cCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCC
Q 021299 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (314)
Q Consensus 178 ~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (314)
+|||.+.+ ..++.++||||||+++|+|++|..||...+.......+.... .
T Consensus 160 ~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~-----~----------------------- 210 (312)
T cd05585 160 LAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP-----L----------------------- 210 (312)
T ss_pred CCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-----C-----------------------
Confidence 99999876 668999999999999999999999998877665555443210 0
Q ss_pred ccCCCCCHHHHHHHhhhcccCCCCCC---CHHHHhcCccccccC
Q 021299 258 SLFPSASDDALDLLSKMFTYDPKARI---TAQQALEHRFAKSFN 298 (314)
Q Consensus 258 ~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~h~~~~~~~ 298 (314)
.....+++++.++|.+||+.||.+|| ++.+++.||||+..+
T Consensus 211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 211 RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 11234688999999999999999997 589999999999863
No 69
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.9e-46 Score=332.40 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=211.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++++.||+|++|+||++.++.+++.||+|++...... ......+..|+.+++.++|++|+++++.+++....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 5799999999999999999999999999999999764322 222234567999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC---
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--- 166 (314)
||++| +|.+.+... +.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 99986 777777654 4699999999999999999999999999999999999999999999999999875422110
Q ss_pred --------------------------------cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCC
Q 021299 167 --------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG 214 (314)
Q Consensus 167 --------------------------------~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~ 214 (314)
......||+.|+|||.+.+ ..++.++|+|||||++|+|++|..||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0123468999999999876 5688999999999999999999999988
Q ss_pred CCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCC---CCCCHHHHhcC
Q 021299 215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPK---ARITAQQALEH 291 (314)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~---~Rps~~ell~h 291 (314)
....+....+....... ..+. ...+++++.++|.+|+. +|. .||+++||++|
T Consensus 239 ~~~~~~~~~i~~~~~~~---~~p~---------------------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETL---IFPP---------------------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCcc---cCCC---------------------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 87777666654321110 0000 11358899999999776 444 46899999999
Q ss_pred ccccccC
Q 021299 292 RFAKSFN 298 (314)
Q Consensus 292 ~~~~~~~ 298 (314)
|||+.++
T Consensus 294 p~f~~~~ 300 (363)
T cd05628 294 PFFEGVD 300 (363)
T ss_pred CCCCCCC
Confidence 9999874
No 70
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.8e-46 Score=333.62 Aligned_cols=260 Identities=27% Similarity=0.429 Sum_probs=213.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|+||+||++++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4799999999999999999999999999999999764322 122234567999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC---
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--- 166 (314)
||+.| +|.+.+... +.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 99985 677776654 4699999999999999999999999999999999999999999999999999875422110
Q ss_pred -----------------------------------cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCc
Q 021299 167 -----------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF 211 (314)
Q Consensus 167 -----------------------------------~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~p 211 (314)
......||+.|+|||++.. ..++.++|||||||++|+|++|..|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCC
Confidence 0112358999999999876 6689999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHH
Q 021299 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQA 288 (314)
Q Consensus 212 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~el 288 (314)
|...........+....... ..+. ...+++++.+||.+||. +|.+|++ ++++
T Consensus 239 f~~~~~~~~~~~i~~~~~~~---~~~~---------------------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l 293 (364)
T cd05599 239 FCSDNPQETYRKIINWKETL---QFPD---------------------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI 293 (364)
T ss_pred CCCCCHHHHHHHHHcCCCcc---CCCC---------------------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence 98887666655554321100 0010 11458999999999997 9999998 9999
Q ss_pred hcCccccccC
Q 021299 289 LEHRFAKSFN 298 (314)
Q Consensus 289 l~h~~~~~~~ 298 (314)
+.||||+..+
T Consensus 294 l~h~~~~~~~ 303 (364)
T cd05599 294 KSHPFFKGVD 303 (364)
T ss_pred hcCCCcCCCC
Confidence 9999998764
No 71
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.5e-46 Score=327.11 Aligned_cols=254 Identities=24% Similarity=0.386 Sum_probs=209.4
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHH---hhcCCCCeeeeeceeccCCeEEEE
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLL---KELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l---~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
|++++.||+|++|.||++.+..+|+.|++|.+...... ......+..|.+++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78899999999999999999999999999999764321 12223344555544 566899999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||+.| +|...+.. +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+..........
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT 158 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence 999986 66665543 359999999999999999999999999999999999999999999999999987543333333
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||......+....+......
T Consensus 159 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~------------------ 219 (324)
T cd05589 159 STFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR------------------ 219 (324)
T ss_pred cccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC------------------
Confidence 44568899999999876 66789999999999999999999999888776666555432111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
....+++.+.++|.+||+.||++|| ++.++++||||+.+.
T Consensus 220 ----------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 220 ----------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred ----------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 1124588999999999999999999 799999999999864
No 72
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.4e-46 Score=331.30 Aligned_cols=262 Identities=26% Similarity=0.356 Sum_probs=218.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||+|++|+||++.++.+|+.+++|.+..... .......+.+|+.+++.++|++|+++.+++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999999999999999986543 2223334568899999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~ 168 (314)
||++| +|.+++......+++..+..++.|++.||.+||++|++|+||||+||+++.++.++|+|||++........ ..
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 99975 88888877666799999999999999999999999999999999999999999999999999987643322 22
Q ss_pred cccccCccccCcccccC-----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 169 THQVFARWYRAPELLFG-----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~-----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
....+++.|+|||.+.. ...++.++||||||+++|+|++|..||...........+...... ..++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~------ 231 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF---LKFP------ 231 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc---cCCC------
Confidence 33468899999999863 345789999999999999999999999887776666655432110 0111
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..+.+++++.+||.+||+ +|.+||++++++.||||+.++
T Consensus 232 ---------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~ 270 (330)
T cd05601 232 ---------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKID 270 (330)
T ss_pred ---------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence 012468999999999998 999999999999999999764
No 73
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.4e-46 Score=328.29 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=208.2
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
+.||+|+||.||++.+..+|..+|+|++...... ......+.+|+++++.++||||+++.+.+...+..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4689999999999999999999999999765322 22234566899999999999999999999999999999999986
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCc
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFAR 175 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 175 (314)
+|...+.. .+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............|++
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 159 (328)
T cd05593 81 ELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP 159 (328)
T ss_pred CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence 66666654 34689999999999999999999999999999999999999999999999999875433333334456889
Q ss_pred cccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCC
Q 021299 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (314)
Q Consensus 176 ~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
.|+|||.+.+ ..++.++||||||+++|+|++|..||...+.......+.... .
T Consensus 160 ~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~-----~--------------------- 212 (328)
T cd05593 160 EYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED-----I--------------------- 212 (328)
T ss_pred CccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC-----c---------------------
Confidence 9999999876 567999999999999999999999998766555544432210 0
Q ss_pred CCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 256 LRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 256 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.+...+++++.++|.+||..||++|+ +++++++||||...+
T Consensus 213 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 258 (328)
T cd05593 213 --KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVN 258 (328)
T ss_pred --cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 11234689999999999999999997 899999999998753
No 74
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-45 Score=330.06 Aligned_cols=261 Identities=26% Similarity=0.331 Sum_probs=215.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|++.+.||+|++|.||++.++.+++.+|+|.+....... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 578999999999999999999999999999999997543222 2223456899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
|||++| +|.+.+... .+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+........ .
T Consensus 122 ~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 122 MEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence 999985 777776543 488999999999999999999999999999999999999999999999999987643322 2
Q ss_pred ccccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 FTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....|++.|+|||.+.+. ..++.++|+||||+++|+|++|..||...........+...... ..++.
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~~------ 270 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS---LTFPD------ 270 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc---CCCCC------
Confidence 2345689999999998652 24789999999999999999999999988776666665432111 11111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~ 297 (314)
...++.++.+||++||+.+|.+ |++++++++||||+..
T Consensus 271 ---------------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 271 ---------------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred ---------------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 1235899999999999999988 9999999999999864
No 75
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.5e-46 Score=325.90 Aligned_cols=251 Identities=27% Similarity=0.396 Sum_probs=208.7
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|++|+||++.++.+++.|++|.+..... .......+..|..+++.+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999999999999999976432 122233455777888766 699999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT 159 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence 676666544 469999999999999999999999999999999999999999999999999987643333333445689
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~------------------------ 214 (320)
T cd05590 160 PDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV------------------------ 214 (320)
T ss_pred ccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC------------------------
Confidence 99999999876 66789999999999999999999999988777766665432110
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH------HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA------QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~ell~h~~~~~~~ 298 (314)
....+++++.++|.+||+.||.+||++ +++++||||+.+.
T Consensus 215 ----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 215 ----YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred ----CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 112358899999999999999999998 9999999998764
No 76
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-45 Score=318.75 Aligned_cols=281 Identities=44% Similarity=0.830 Sum_probs=228.9
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||.|++|.||++.+..+|..+++|.+...... .....+.+|+++++.++|+|++++++++.+.+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 589999999999999999999999999999999765432 2234566899999999999999999999999999999999
Q ss_pred ccccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 METDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
++|++.+.+.... ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 9999988887544 56899999999999999999999999999999999999999999999999999765443333344
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh-hc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE-YQ 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (314)
..++..|+|||.+.+...++.++|+||||+++|+|++|..||......+...++...........+........... ..
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 55678899999987756678999999999999999999999999888888888777766555554443332221110 00
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
...........+.+++.+.++|.+||+.||++||+++++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000111122334568899999999999999999999999999998
No 77
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-45 Score=321.86 Aligned_cols=251 Identities=25% Similarity=0.358 Sum_probs=212.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcE-EEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-eEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT-VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~-~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~i 88 (314)
.+...+.+.||+|+||+||++.+. |.. +++|.+............+.+|+.++.+++||||+++++++.+.. ..++
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i 117 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI 117 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence 455566777999999999999766 555 999999877655554668889999999999999999999998877 7999
Q ss_pred EEeccc-ccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCCCceEEecCC-cEEEeeccceeeeCCC
Q 021299 89 VFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP 164 (314)
Q Consensus 89 v~e~~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~~ 164 (314)
||||++ |+|..++.. ....++...+..++.||+.||.|||+++ |+|+||||+|||++.++ .+||+|||+++.....
T Consensus 118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 999998 578888877 4778999999999999999999999999 99999999999999997 9999999999877544
Q ss_pred CCcccccccCccccCcccccC-ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 165 DRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~-~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
........||+.|||||++.+ ...++.++||||+|+++|+|+||..||...........+........
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~----------- 266 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP----------- 266 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------
Confidence 334444789999999999985 26799999999999999999999999999888555555543322111
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
+....++.+..|+.+||..||.+||+..+++
T Consensus 267 ---------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 267 ---------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred ---------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 1123588999999999999999999998875
No 78
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.7e-46 Score=319.44 Aligned_cols=259 Identities=34% Similarity=0.528 Sum_probs=215.4
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
|++.+.||+|++|+||++.+..+++.+|+|.+..............+|+..+++++||||+++.+++......+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999987655544444456999999999999999999999999999999999
Q ss_pred cc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccc
Q 021299 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 94 ~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
++ +|.+++. ..+.+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+..............
T Consensus 81 ~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 81 PGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp TTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred cccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98 8888887 344589999999999999999999999999999999999999999999999999987544455556677
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (314)
+++.|+|||.+......+.++|+||||+++++|++|..||...........+..............
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 225 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ-------------- 225 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS--------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc--------------
Confidence 889999999987347789999999999999999999999988743333333322211111110000
Q ss_pred CCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 253 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....+.++.++|.+||+.||++||+++++++||||
T Consensus 226 -------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 226 -------SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -------cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 01113789999999999999999999999999998
No 79
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8e-46 Score=325.56 Aligned_cols=256 Identities=25% Similarity=0.354 Sum_probs=212.5
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCC-CCeeeeeceeccCCeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKS-PHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~ 90 (314)
+|++.+.||+|++|.||+|.++.+++.||+|++...... ......+..|.+++..+.| ++|+.+.+++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999999764321 2223345678888988876 46888999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|...+... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 99985 777776554 4589999999999999999999999999999999999999999999999999875433333334
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||......+....+.....
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-------------------- 218 (324)
T cd05587 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-------------------- 218 (324)
T ss_pred eecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------------
Confidence 4568899999999976 6678999999999999999999999988777666665543211
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
.....+++++.+++.+||..||.+|++. +++++||||+..+
T Consensus 219 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~ 264 (324)
T cd05587 219 --------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID 264 (324)
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 1112458899999999999999999986 8999999999864
No 80
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-45 Score=324.26 Aligned_cols=285 Identities=25% Similarity=0.388 Sum_probs=216.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++.+..+|..+++|.+..... ......+.+|+++++.++||||+++++++..++..+++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 4799999999999999999999999999999999876432 223346778999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||++| +|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ..
T Consensus 83 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 159 (331)
T cd06649 83 EHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (331)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--cc
Confidence 99986 7777776543 589999999999999999999986 6999999999999999999999999998755322 22
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc----
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD---- 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 244 (314)
....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+....................
T Consensus 160 ~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (331)
T cd06649 160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGR 238 (331)
T ss_pred ccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccc
Confidence 34568889999999876 5689999999999999999999999987665444332211110000000000000000
Q ss_pred ---------------hhhhccccCCCCCcc-CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 245 ---------------YVEYQYVAAPPLRSL-FPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 245 ---------------~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
............+.. ...+++++.+||.+||+.||++|||++++++||||+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~ 310 (331)
T cd06649 239 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE 310 (331)
T ss_pred cccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence 000000000000000 12468899999999999999999999999999999976543
No 81
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.2e-45 Score=316.36 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=207.1
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||+|+||+||++.++.+|+.+++|.+........ ....+..|+++++.++|++|+++.+++......+++|||++| +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999999999999999999876533221 223456799999999999999999999999999999999985 77
Q ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 98 ETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 98 ~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
...+.. ....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||.+..............++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence 666543 34568999999999999999999999999999999999999999999999999998765444444455788
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+........
T Consensus 161 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------- 217 (280)
T cd05608 161 PGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS---------------------- 217 (280)
T ss_pred cCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC----------------------
Confidence 89999999977 5678999999999999999999999977554333222222211111
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
......+++.+.+++.+||+.||++|| +++++++||||+.++
T Consensus 218 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 218 --VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred --CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 011234689999999999999999999 889999999999864
No 82
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9.4e-46 Score=324.71 Aligned_cols=250 Identities=27% Similarity=0.367 Sum_probs=208.6
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||.||+|.++.+++.+++|.+...... ......+..|.+++..+ +||+|+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999999764322 22223455788888766 799999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+..............|+
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT 159 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence 777666544 458999999999999999999999999999999999999999999999999997643333334455688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||......+....+......
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~------------------------ 214 (321)
T cd05591 160 PDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL------------------------ 214 (321)
T ss_pred ccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC------------------------
Confidence 99999999876 66899999999999999999999999988877766665432110
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCC-------CHHHHhcCcccccc
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-------TAQQALEHRFAKSF 297 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-------s~~ell~h~~~~~~ 297 (314)
....+++++.+++.+||+.||++|| +++++++||||..+
T Consensus 215 ----~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 215 ----YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred ----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 0113588999999999999999999 99999999999875
No 83
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.1e-45 Score=318.34 Aligned_cols=285 Identities=42% Similarity=0.726 Sum_probs=224.6
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 83 (314)
..++|.+.+.||+|++|.||++.+..+++.+++|.+..............+|++++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 45789999999999999999999999999999999876554443344556899999999999999999987543
Q ss_pred --CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 84 --GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 84 --~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
...+++|||+++++.+.+......+++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+...
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 346999999999999988877667999999999999999999999999999999999999999999999999999765
Q ss_pred CCCCC----cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 162 GSPDR----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 162 ~~~~~----~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
..... ......++..|+|||.+.+...++.++|+||||+++|+|++|.+||...+.......+....+..++..++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence 33221 11233567789999998775567899999999999999999999999888777777776666655555554
Q ss_pred CcCcccchhhhccccCC--CCCc--cCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 238 DLAYLPDYVEYQYVAAP--PLRS--LFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
................. .... .....+..+.++|.+||..||.+|||++++++||||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 250 GVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred cccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 43222211111000000 0000 001136778999999999999999999999999998
No 84
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-46 Score=317.20 Aligned_cols=258 Identities=28% Similarity=0.499 Sum_probs=231.5
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCC-cccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.++..+|.+.+.||+|.+|.|-++.....|..||||.++++. .+++....+.+|++++..++||||++++.+|++.+.+
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 357789999999999999999999988999999999998875 4445556788999999999999999999999999999
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
.|||||.. |.|.+++.+++ .+++..++.+++||++|+.|+|+++++|+|||.+||+++.|+++||.|||++-... +.
T Consensus 129 vivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~-~~ 206 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA-DK 206 (668)
T ss_pred EEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc-cc
Confidence 99999998 58999998765 59999999999999999999999999999999999999999999999999997663 33
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
......+|+|.|.+||++.+..+-.+..|.||||++||.|+.|..||.+.+....+.++..+....++
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~------------ 274 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE------------ 274 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC------------
Confidence 44456789999999999999777789999999999999999999999999999999998877443332
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
-+..+.-||+.||..+|++|.|+++|.+|=|++=
T Consensus 275 -----------------~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 275 -----------------TPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred -----------------CCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 2777999999999999999999999999999873
No 85
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-48 Score=327.93 Aligned_cols=262 Identities=28% Similarity=0.415 Sum_probs=224.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
...|+..+.||.|+||.||+|.+..+++.||+|++........ ...+.+|+.++..++++||.+.++.|..+...+++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de-Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE-IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchh-hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 3578889999999999999999999999999999988765443 346778999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|||.|+...-+.+.+..+++..+..++++++.|+.|||..+.+|+|||+.||++..+|.|+|+|||.+............
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 99997555555555555689999999999999999999999999999999999999999999999999988776666688
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
.+|||.|||||++.+ ..|+.++||||||++.++|++|.+|+....+...+..+ ....|..+
T Consensus 171 fvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----pk~~PP~L-------------- 231 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----PKSAPPRL-------------- 231 (467)
T ss_pred ccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----cCCCCCcc--------------
Confidence 899999999999985 78999999999999999999999999887773332222 11112111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
....++.+++||..||+.||+.||+|.++|+|+|++.-.+..
T Consensus 232 ---------~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s 273 (467)
T KOG0201|consen 232 ---------DGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTS 273 (467)
T ss_pred ---------ccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCch
Confidence 124689999999999999999999999999999999855433
No 86
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.7e-45 Score=330.33 Aligned_cols=260 Identities=26% Similarity=0.356 Sum_probs=209.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.|.+++.||+|+||+||+|.+..+++.||+|++...... ......+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 589999999999999999999999999999999765322 2223356689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-----
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----- 165 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~----- 165 (314)
|++| +|.+++... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9985 777777654 358999999999999999999999999999999999999999999999999875321100
Q ss_pred ------------------------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHH
Q 021299 166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA 203 (314)
Q Consensus 166 ------------------------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~ 203 (314)
.......||+.|+|||.+.+ ..++.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILF 239 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHH
Confidence 00112468899999999876 56789999999999999
Q ss_pred HHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcc--cCCCC
Q 021299 204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFT--YDPKA 281 (314)
Q Consensus 204 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~--~dp~~ 281 (314)
+|++|..||...........+....... ..+ ....+++++.+||.+|+. .+|.+
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~~---------------------~~~~~s~~~~dli~~ll~~~~~~~~ 295 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTL---HIP---------------------PQVKLSPEAVDLITKLCCSAEERLG 295 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHcccccc---CCC---------------------CCCCCCHHHHHHHHHHccCcccccC
Confidence 9999999998877665555443221110 011 012468999999999665 45555
Q ss_pred CCCHHHHhcCccccccC
Q 021299 282 RITAQQALEHRFAKSFN 298 (314)
Q Consensus 282 Rps~~ell~h~~~~~~~ 298 (314)
|+++++++.||||+.+.
T Consensus 296 R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 296 RNGADDIKAHPFFSEVD 312 (381)
T ss_pred CCCHHHHhcCcccCCCC
Confidence 99999999999998764
No 87
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=311.81 Aligned_cols=261 Identities=26% Similarity=0.349 Sum_probs=222.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.+.|++++.||.|.-|+||+++.+.++..+|+|++.+..... ....+...|.++|+.++||.++.+++.|+.+...|++
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 368899999999999999999999999999999998876543 2333455799999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC----
Q 021299 90 FEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS---- 163 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~---- 163 (314)
||||.| +|..+.+++ ++.+++..++-++..++.||+|||..||++|||||+||||-++|.+.|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 999996 788777765 55799999999999999999999999999999999999999999999999988732200
Q ss_pred -----------------------------C-C----------------------CcccccccCccccCcccccCccCCCC
Q 021299 164 -----------------------------P-D----------------------RRFTHQVFARWYRAPELLFGAKQYGA 191 (314)
Q Consensus 164 -----------------------------~-~----------------------~~~~~~~~~~~y~sPE~~~~~~~~~~ 191 (314)
. . ......+||-.|+|||++.+ ..-+.
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgs 314 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGS 314 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-CCCCc
Confidence 0 0 11123456777999999998 44689
Q ss_pred cchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHH
Q 021299 192 GVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLL 271 (314)
Q Consensus 192 ~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 271 (314)
+.|.|+||+++|||+.|..||++.+..+++..+.......+.. +.++..+++||
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--------------------------~~vs~~akDLI 368 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--------------------------PEVSSAAKDLI 368 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--------------------------CcchhHHHHHH
Confidence 9999999999999999999999999999999887653322221 24688999999
Q ss_pred hhhcccCCCCCCC----HHHHhcCccccccC
Q 021299 272 SKMFTYDPKARIT----AQQALEHRFAKSFN 298 (314)
Q Consensus 272 ~~~l~~dp~~Rps----~~ell~h~~~~~~~ 298 (314)
+++|.+||.+|.. ++||.+||||++++
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred HHHhccChhhhhccccchHHhhcCccccCCC
Confidence 9999999999999 99999999999985
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-45 Score=322.88 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=207.8
Q ss_pred eeeeCccccceEEEEEEC---CCCcEEEEEEeecCCcc--cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 17 REVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++.||+|+||.||++++. .+++.+++|.+...... ......+.+|+.+++.++||||+++++.+..++..|++||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 468999999999999864 46789999999764321 1222345679999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|+.| +|.+.+... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++............
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (323)
T cd05584 81 YLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT 159 (323)
T ss_pred CCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence 9986 676666544 46889999999999999999999999999999999999999999999999998754333333344
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+.......+.....
T Consensus 160 ~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~--------------------- 217 (323)
T cd05584 160 FCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL--------------------- 217 (323)
T ss_pred cCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------------------
Confidence 568899999999876 5678999999999999999999999988777666655543211
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCcccccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSF 297 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~ 297 (314)
...+.+++.+.++|.+||..||++|| +++++++||||+..
T Consensus 218 -------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 218 -------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 11224588999999999999999999 89999999999865
No 89
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3e-45 Score=321.03 Aligned_cols=274 Identities=38% Similarity=0.674 Sum_probs=206.9
Q ss_pred eeeeCccccceEEEEEEC--CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec--cCCeEEEEEec
Q 021299 17 REVLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVFEF 92 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~iv~e~ 92 (314)
...||+|+||+||+|.++ .++..+++|.+..... .....+|++++++++||||+++.+.+. .+...+++||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999865 3668899999864432 234568999999999999999999874 45678999999
Q ss_pred ccccHHHHHHhC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE----ecCCcEEEeeccceee
Q 021299 93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI 160 (314)
Q Consensus 93 ~~g~l~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~----~~~~~~~l~df~~~~~ 160 (314)
+++++.+.+... ...+++..++.++.||+.||.|||++|++|+||||+||++ +.++.+||+|||.+..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 999988887532 2258999999999999999999999999999999999999 3557899999999986
Q ss_pred eCCCC---CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc---------HHHHHHHHHhh
Q 021299 161 FGSPD---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF 228 (314)
Q Consensus 161 ~~~~~---~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~---------~~~~~~~~~~~ 228 (314)
..... .......+++.|+|||.+.+...++.++|+||+|+++|+|++|.+||..... ......+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 54322 1223456788999999998766789999999999999999999999965442 34455555555
Q ss_pred CCCCCCCCCCcCcccchhhhccc-------cC---CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYV-------AA---PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+......|+.............. .. ..........++++.+||++||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 55444444432222111100000 00 00001112346779999999999999999999999999998
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6e-46 Score=326.50 Aligned_cols=251 Identities=25% Similarity=0.377 Sum_probs=207.5
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
+.||+|+||.||++.+..+|..+++|.+...... ........+|+++++.++||||+++.+.+..++..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999999999999999999764322 12223456789999999999999999999999999999999986
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. ...+++..+..++.||+.||.|||+ +|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (325)
T cd05594 81 ELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 159 (325)
T ss_pred cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence 66555544 4468999999999999999999997 799999999999999999999999999987643333333445688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++||||||+++|+|++|..||...........+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~------------------------- 213 (325)
T cd05594 160 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI------------------------- 213 (325)
T ss_pred cccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-------------------------
Confidence 99999999876 5679999999999999999999999987766555444322110
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.+...+++++.+||.+||+.||++|+ ++.++++||||.+..
T Consensus 214 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 214 ---RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 01124588999999999999999997 899999999999764
No 91
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.2e-45 Score=315.43 Aligned_cols=281 Identities=59% Similarity=0.957 Sum_probs=233.1
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
|.+.+.||+|++|.||++.+..+++.+++|.+............+.+|+++++.++|++|+++++++..+...++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 67889999999999999999889999999998776555444556778999999999999999999999999999999999
Q ss_pred cccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 94 ~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
++++.+.+......+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+..............+
T Consensus 81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 160 (283)
T cd05118 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV 160 (283)
T ss_pred CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence 99999998877677999999999999999999999999999999999999999999999999999877554433344567
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch--hhhccc
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY--VEYQYV 251 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 251 (314)
+..|+|||.+.+...++.++|+||||+++|+|++|+.||...+..+....+....+...+..++........ ......
T Consensus 161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05118 161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK 240 (283)
T ss_pred cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc
Confidence 788999999877557899999999999999999999999998888887777766666555555443321111 111111
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.........+.++.++.++|.+||+.||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 1112223345678999999999999999999999999999997
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-45 Score=326.11 Aligned_cols=258 Identities=27% Similarity=0.412 Sum_probs=206.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|..++.||+|++|+||++.+..+|+.|++|.+..... ......+.+|+++++.++|+||+++++++..++..+++|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 5788999999999999999999999999999999865432 223345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+.| +|.. ....++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 152 e~~~~~~L~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 226 (353)
T PLN00034 152 EFMDGGSLEG-----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226 (353)
T ss_pred ecCCCCcccc-----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence 99997 4432 22356788889999999999999999999999999999999999999999999987644333334
Q ss_pred ccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
...|+..|+|||.+.. ....+.++||||||+++|+|++|..||......+....+........
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 293 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP------------- 293 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------------
Confidence 4578899999998743 23446799999999999999999999974433222222211111111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
......++.++.+||.+||..||++||++.|+++||||.+-.
T Consensus 294 -----------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 294 -----------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred -----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 111234688999999999999999999999999999999753
No 93
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.7e-45 Score=327.21 Aligned_cols=261 Identities=26% Similarity=0.349 Sum_probs=214.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|++.+.||+|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 58999999999999999999999999999999998753322 12223456899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
|||++| +|.+++... .+++..+..++.||+.||+|||++|++|+||||+||+++.++.+||+|||++........ .
T Consensus 122 ~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~ 199 (370)
T cd05621 122 MEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR 199 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence 999985 788877644 488999999999999999999999999999999999999999999999999987643222 2
Q ss_pred ccccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 FTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....|++.|+|||.+.+. ..++.++|+||||+++|+|++|..||...........+....... .++.
T Consensus 200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~p~------ 270 (370)
T cd05621 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL---NFPE------ 270 (370)
T ss_pred cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc---CCCC------
Confidence 2355689999999998653 237899999999999999999999998887776666655432111 1111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~ 297 (314)
...++..+.+++.+||+.++.+ |++++|+++||||+..
T Consensus 271 ---------------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 271 ---------------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred ---------------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 1235889999999999865544 8999999999999864
No 94
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-45 Score=322.24 Aligned_cols=251 Identities=27% Similarity=0.394 Sum_probs=205.7
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||.||++.++.+|+.+++|.+...... .........|..++... +||+|+++++++.+.+..|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999999765321 12223345677777654 899999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+..............|+
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence 777776654 468999999999999999999999999999999999999999999999999987543333333455689
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+..... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~-----~------------------- 214 (316)
T cd05620 160 PDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP-----H------------------- 214 (316)
T ss_pred cCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----C-------------------
Confidence 99999999976 6689999999999999999999999988776655554432210 0
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH-HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~ell~h~~~~~~~ 298 (314)
....++.++.+||.+||+.||++||++ +++++||||+.++
T Consensus 215 ----~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 215 ----YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred ----CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 112358899999999999999999998 5899999998864
No 95
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.7e-45 Score=316.56 Aligned_cols=283 Identities=37% Similarity=0.674 Sum_probs=223.7
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++.+..+++.+++|.+............+.+|+++++.++||||+++++++...+..++++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 57999999999999999999998899999999987655444344456789999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|++++++..+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY 160 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence 99987766665555568999999999999999999999999999999999999999999999999998764444433445
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc---hhhh
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD---YVEY 248 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 248 (314)
.++..|+|||.+.+...++.++|+||||+++++|++|.+||......+....+....+............... ....
T Consensus 161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T cd07846 161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP 240 (286)
T ss_pred cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence 6788899999987656678899999999999999999999988777776666665544322111000000000 0000
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
............++++..+.+|+.+||+.+|++||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000111122245678999999999999999999999999999998
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-45 Score=324.95 Aligned_cols=260 Identities=27% Similarity=0.406 Sum_probs=207.6
Q ss_pred hccceeeeCccccceEEEEEEC---CCCcEEEEEEeecCCcc--cCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNL 86 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 86 (314)
+|++.+.||+|++|+||++++. .++..+++|++...... ......+..|+.+++.+. |++|+++.+++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999764 46789999999754321 122234567999999994 89999999999999999
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
+++|||+.| +|.+.+... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 999999986 777777654 358999999999999999999999999999999999999999999999999997643322
Q ss_pred -CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 166 -~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.......|++.|+|||.+.+...++.++||||||+++|+|++|..||...........+........+
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~----------- 228 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP----------- 228 (332)
T ss_pred CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC-----------
Confidence 22224468899999999977556789999999999999999999999654322222222211111111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~ 297 (314)
.....+++.+.+++.+||..||++|| +++++++||||+..
T Consensus 229 -------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 229 -------------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 11234688999999999999999999 88999999999875
No 97
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.6e-45 Score=318.74 Aligned_cols=284 Identities=45% Similarity=0.775 Sum_probs=231.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--------
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------- 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 82 (314)
.++|.+.+.||+|++|.||++.++.+++.+++|.+..............+|+++++.++|+||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 689999999999999999999999999999999987655444333456689999999999999999987633
Q ss_pred CCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 83 KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 83 ~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
....++++||+.+++...+......+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 23579999999999988888766679999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCc-----------ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCC
Q 021299 163 SPDRR-----------FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (314)
Q Consensus 163 ~~~~~-----------~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 231 (314)
..... .....+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...........+....+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 32211 1223457789999998765668899999999999999999999999888888888877776666
Q ss_pred CCCCCCCcCcccchhh--hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 232 TPSQWPDLAYLPDYVE--YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.+..++.....+.... ...............+++.+.++|.+||..||.+|||+.+++.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 6666665544443321 11111122222344567889999999999999999999999999998
No 98
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-44 Score=313.17 Aligned_cols=282 Identities=43% Similarity=0.750 Sum_probs=219.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++.+..+|..+++|.+...... .....+.+|+.+++.++|+||+++.+++..++..++++|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 6899999999999999999999999999999998765432 233355689999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|+.+++.+.+......+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.+.............
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 163 (291)
T cd07870 84 YMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSE 163 (291)
T ss_pred cccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCc
Confidence 99999998887666678889999999999999999999999999999999999999999999999987654433333444
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc-HHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
.+++.|+|||.+.+...++.++|+||||+++++|++|..||..... .+...++....+......++.....+.......
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF 243 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence 5688899999987655678899999999999999999999976543 344444444444333333322221111111000
Q ss_pred cc--CCCCCccCC--CCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VA--APPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~--~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.. ......... ..++.+.+++.+||..||++|||+.|++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00 000111111 236789999999999999999999999999997
No 99
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-44 Score=314.81 Aligned_cols=287 Identities=43% Similarity=0.770 Sum_probs=233.3
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC---
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--- 84 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 84 (314)
....++|++.+.||+|++|.||++.++.+|+.+++|.+............+.+|++++++++|||++++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 44678999999999999999999999999999999999766544444445668999999999999999999886544
Q ss_pred -------eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccc
Q 021299 85 -------NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (314)
Q Consensus 85 -------~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~ 157 (314)
..++++||+++++...+......+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 7899999999999888887666799999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCC-cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 158 ARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
+........ ......++..|+|||.+.+....+.++|+||||+++++|++|.+||...+..+....+....+...+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 986543321 1223345677999998876556789999999999999999999999988888888888877776666666
Q ss_pred CCcCcccchhhhccc--cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 237 PDLAYLPDYVEYQYV--AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+.....+........ ...........++..+.+++.+||..||++||++++++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 554333222111110 1111222334568999999999999999999999999999997
No 100
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.8e-45 Score=322.44 Aligned_cols=251 Identities=26% Similarity=0.381 Sum_probs=208.1
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||+||++.++.++..+++|.+...... .........|.++++.+ +||||+++++++...+..++||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999865322 22223455788888877 699999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++..............++
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 159 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT 159 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence 676666544 469999999999999999999999999999999999999999999999999987543333333345688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~------------------------- 213 (318)
T cd05570 160 PDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV------------------------- 213 (318)
T ss_pred ccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence 89999999976 6789999999999999999999999988776665555432210
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
.....+++++.+||++||..||.+||++ .++++||||+..+
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~ 259 (318)
T cd05570 214 ---RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID 259 (318)
T ss_pred ---CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 0112458899999999999999999999 9999999998864
No 101
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-45 Score=330.88 Aligned_cols=260 Identities=28% Similarity=0.401 Sum_probs=209.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+++.||+|+||+||++.+..+|+.|++|++..... .......+.+|+++++.++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 479999999999999999999999999999999875432 1222234567999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC---
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--- 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--- 166 (314)
||++| +|.+.+... +.+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99975 787777654 4689999999999999999999999999999999999999999999999999863211000
Q ss_pred --------------------------------------------cccccccCccccCcccccCccCCCCcchHhhHHHHH
Q 021299 167 --------------------------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIF 202 (314)
Q Consensus 167 --------------------------------------------~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll 202 (314)
......|++.|+|||.+.+ ..++.++|+|||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil 238 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIM 238 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhh
Confidence 0012458899999999876 6689999999999999
Q ss_pred HHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCC
Q 021299 203 AELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282 (314)
Q Consensus 203 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 282 (314)
|+|++|.+||......+....+...... ..++. ...++.++.+||.+||. +|.+|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~---------------------~~~~s~~~~dli~~lL~-~~~~r 293 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRET---LYFPD---------------------DIHLSVEAEDLIRRLIT-NAENR 293 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCc---cCCCC---------------------CCCCCHHHHHHHHHHhc-CHhhc
Confidence 9999999999887766665554432110 01110 12358899999999998 66665
Q ss_pred ---CCHHHHhcCccccccC
Q 021299 283 ---ITAQQALEHRFAKSFN 298 (314)
Q Consensus 283 ---ps~~ell~h~~~~~~~ 298 (314)
+++.+++.||||+..+
T Consensus 294 ~~r~~~~~~l~hp~~~~~~ 312 (377)
T cd05629 294 LGRGGAHEIKSHPFFRGVD 312 (377)
T ss_pred CCCCCHHHHhcCCCcCCCC
Confidence 5999999999998753
No 102
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.1e-45 Score=321.68 Aligned_cols=256 Identities=25% Similarity=0.343 Sum_probs=213.0
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
+|.+.+.||+|+||.||++.+..+++.+++|.+....... ........|..++..+ .|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5889999999999999999999999999999998653222 1222345677777777 4799999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|...+... +.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 99985 777776554 3589999999999999999999999999999999999999999999999999976543333444
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~------------------- 219 (323)
T cd05616 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA------------------- 219 (323)
T ss_pred cCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------
Confidence 5668899999999976 66899999999999999999999999988777666665443111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
....++.++.+++.+||+.||++|++. .++++||||+.++
T Consensus 220 ---------~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 220 ---------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred ---------CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 112458899999999999999999984 8999999998764
No 103
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.6e-46 Score=331.54 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=211.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+|++++.||+|++|+||++++..+++.+|+|.+...... ......+.+|+.+++.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3699999999999999999999999999999998654321 122335668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC----
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~---- 165 (314)
||++| +|.+++... +.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 99985 787777654 468999999999999999999999999999999999999999999999999975321000
Q ss_pred ---------------------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH
Q 021299 166 ---------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (314)
Q Consensus 166 ---------------------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll 206 (314)
.......|++.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehh
Confidence 00112468899999999976 66799999999999999999
Q ss_pred hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC---
Q 021299 207 NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI--- 283 (314)
Q Consensus 207 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp--- 283 (314)
+|..||......+....+....... .. +....+++++.++|.+|+ .+|.+|+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~---~~---------------------~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTL---HI---------------------PSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccc---cC---------------------CCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 9999998877666555443211100 00 011246889999999976 5999999
Q ss_pred CHHHHhcCccccccC
Q 021299 284 TAQQALEHRFAKSFN 298 (314)
Q Consensus 284 s~~ell~h~~~~~~~ 298 (314)
++.++++||||+.++
T Consensus 294 t~~ell~h~~~~~~~ 308 (376)
T cd05598 294 GADEIKAHPFFKGID 308 (376)
T ss_pred CHHHHhCCCCcCCCC
Confidence 999999999999764
No 104
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-45 Score=330.24 Aligned_cols=259 Identities=26% Similarity=0.373 Sum_probs=210.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+|++++.||+|+||+||++++..+++.+++|.+...... ......+.+|+.+++.++|+||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 689999999999999999999999999999998754321 1222356689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-----
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----- 165 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~----- 165 (314)
|++| +|.+.+... +.+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 9985 777777654 468999999999999999999999999999999999999999999999999875321000
Q ss_pred ------------------------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHH
Q 021299 166 ------------------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFA 203 (314)
Q Consensus 166 ------------------------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~ 203 (314)
.......||+.|+|||++.+ ..++.++|+|||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILY 239 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHH
Confidence 00112368899999999876 56889999999999999
Q ss_pred HHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC
Q 021299 204 ELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI 283 (314)
Q Consensus 204 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 283 (314)
+|++|.+||...++.+....+........ .+ ....+++++.++|.+|+ .+|.+|+
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~---~p---------------------~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLH---IP---------------------PQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcC---CC---------------------CcccCCHHHHHHHHHHc-cCHhHcC
Confidence 99999999988776665555443211110 00 11246899999999986 5999999
Q ss_pred C---HHHHhcCccccccC
Q 021299 284 T---AQQALEHRFAKSFN 298 (314)
Q Consensus 284 s---~~ell~h~~~~~~~ 298 (314)
+ ++++++||||+.++
T Consensus 295 ~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 295 GKNGADEIKAHPFFKTID 312 (382)
T ss_pred CCCCHHHHhcCCCcCCcC
Confidence 7 99999999998864
No 105
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.8e-45 Score=322.64 Aligned_cols=295 Identities=37% Similarity=0.631 Sum_probs=234.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec----cCCe
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP----HKGN 85 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~ 85 (314)
+.++|.+.+.||+|++|.||++.++.+|..|++|.+............+.+|+.+++.++||||+++.+++. ....
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 458999999999999999999999999999999998765443344455668999999999999999999874 3457
Q ss_pred EEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 86 ~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
.++|+||++|++.+.+... +.+++..++.++.||+.||++||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEEEehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 8999999999888877654 459999999999999999999999999999999999999999999999999997654322
Q ss_pred Cc----ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 166 RR----FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 166 ~~----~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.. .....++..|+|||.+.+...++.++|+||||+++|+|++|..||...+.......+....+..++..+.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 11 12346788899999987655689999999999999999999999998888877777777666554443332211
Q ss_pred ccc---hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcceeecc
Q 021299 242 LPD---YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFVFVD 305 (314)
Q Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~~ 305 (314)
... ................+.+++++.++|++||+.+|++||++++++.||||+++........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~ 308 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPT 308 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccccc
Confidence 100 0011111111122234567999999999999999999999999999999998876665544
No 106
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-45 Score=320.22 Aligned_cols=251 Identities=28% Similarity=0.421 Sum_probs=205.3
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhh-cCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||.||+|.+..+++.||+|.+....... ........|..++.. .+||||+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999998653221 222233456666654 4799999999999999999999999985
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt 159 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence 676666544 469999999999999999999999999999999999999999999999999998654333344455689
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~------------------------- 213 (316)
T cd05592 160 PDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP------------------------- 213 (316)
T ss_pred ccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence 99999999876 5689999999999999999999999988777666655432210
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH-HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA-QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~ell~h~~~~~~~ 298 (314)
.....++.++.+++.+||+.||++||++ .+++.||||+..+
T Consensus 214 ---~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 214 ---HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred ---CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 0112358899999999999999999986 5888999999764
No 107
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.3e-45 Score=322.65 Aligned_cols=290 Identities=37% Similarity=0.646 Sum_probs=230.1
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----C
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 84 (314)
+.++|.+.+.||.|++|+||++.+..++..+++|.+............+.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 56789999999999999999999999999999999876433333334566899999999999999999987543 3
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
..++++||+++++.+.+... +.+++..+..++.|++.||.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 58999999999998887654 46999999999999999999999999999999999999999999999999999865433
Q ss_pred CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
........++..|+|||.+.....++.++|+||||+++|+|++|.+||...+.......+....+...+..+........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 22233445678899999887645688999999999999999999999988877777777766666555444321111110
Q ss_pred hh---hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 245 YV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 245 ~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.. ..............+.+++++.++|.+||+.+|++|||++++++||||+.+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00 000111112223345689999999999999999999999999999999987644
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8e-46 Score=324.75 Aligned_cols=252 Identities=26% Similarity=0.421 Sum_probs=210.3
Q ss_pred eeeeCccccceEEEEEEC---CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 17 REVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
++.||+|++|.||++++. .+|+.+++|++..............+|++++++++||||+++++++..++..|+||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 367999999999999763 57889999999865443333345567999999999999999999999999999999999
Q ss_pred cc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccc
Q 021299 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 94 ~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
.| +|.+.+... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+..............
T Consensus 81 ~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 159 (318)
T cd05582 81 RGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 159 (318)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence 85 777777543 4689999999999999999999999999999999999999999999999999976544333334556
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (314)
|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+..... .
T Consensus 160 g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-----~----------------- 216 (318)
T cd05582 160 GTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-----G----------------- 216 (318)
T ss_pred CChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----C-----------------
Confidence 8899999999876 5678999999999999999999999988777666655543211 0
Q ss_pred CCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 253 APPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 253 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
....+++.+.+||++||+.||++||+ +++++.||||+.+.
T Consensus 217 ------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 217 ------MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred ------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence 11245889999999999999999999 78899999998763
No 109
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-46 Score=293.78 Aligned_cols=256 Identities=27% Similarity=0.429 Sum_probs=228.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|.+.+.||.|-||.||+++.+.++-.+++|++.++... ......+.+|+++...++||||++++++|.++...|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 58899999999999999999999999999999999877533 23444566899999999999999999999999999999
Q ss_pred Eeccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
+||.. |.+...++.. .+.+++..++.++.|++.|+.|+|.++++||||||+|++++..+.+||+|||-+... +...
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~--p~~k 178 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA--PSNK 178 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec--CCCC
Confidence 99998 6888888754 556999999999999999999999999999999999999999999999999999765 3556
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+||.-|.|||...+ ...+...|+|++|++.|+++.|.+||......++.+++.+..-..+
T Consensus 179 R~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--------------- 242 (281)
T KOG0580|consen 179 RKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--------------- 242 (281)
T ss_pred ceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---------------
Confidence 677889999999998877 6779999999999999999999999999998899888876532222
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
..++..+.++|.+||..+|.+|.+..|++.|||+.+.
T Consensus 243 -------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 243 -------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred -------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 2569999999999999999999999999999999865
No 110
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7e-45 Score=320.39 Aligned_cols=264 Identities=25% Similarity=0.330 Sum_probs=214.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|+||+||++.+..+++.||+|++...... ......+.+|..+++.++|+||+++++++.++++.++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 5799999999999999999999999999999999753221 122234567899999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~ 168 (314)
||+.| +|.+++......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+........ ..
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 99975 88888876666799999999999999999999999999999999999999999999999999876543322 22
Q ss_pred cccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....|++.|+|||.+.. ...++.++|+||||+++|+|++|..||......+....+....... .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---~--------- 228 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF---Q--------- 228 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc---c---------
Confidence 23468899999999863 2456889999999999999999999998877666655554321100 0
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCccccccC
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSFN 298 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~~ 298 (314)
+......+++.+.++|++||+.++.+ |++++++++||||...+
T Consensus 229 -----------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~ 273 (331)
T cd05597 229 -----------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID 273 (331)
T ss_pred -----------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence 11112346899999999999765544 88999999999998764
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1e-44 Score=312.90 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=213.2
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.|++.+.||+|++|+||++.+..+++.+|+|.+....... .....+.+|+.+++.++||||+++.+.+..++..+++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4889999999999999999999999999999997654322 222345679999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|+.| +|.+.+... ...+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIR 159 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccc
Confidence 9985 777666543 3468999999999999999999999999999999999999999999999999997653222 223
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||...........+.........
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------- 222 (285)
T cd05605 160 GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE---------------- 222 (285)
T ss_pred cccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc----------------
Confidence 4467889999999876 56789999999999999999999999876654444443332211111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.....+++.+.+||.+||..||.+|| +++++++||||...+
T Consensus 223 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 223 --------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred --------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 11234688999999999999999999 999999999999753
No 112
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.4e-45 Score=314.06 Aligned_cols=283 Identities=41% Similarity=0.703 Sum_probs=226.7
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||+|++|.||++.+..+++.+++|.+............+.+|+++++.++|+||+++++++...+..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 47999999999999999999999999999999997765555555677899999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH 170 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~ 170 (314)
|+++++...+......+++..+..++.||+.|+.+||++|++|+||+|+||+++.++.++|+|||.+........ ....
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD 160 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence 999988877766666799999999999999999999999999999999999999999999999999877644432 3334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.+...++.++|+||||+++|+|++|.+||......+....+....+...+.................
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF 240 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence 56678899999998754789999999999999999999999988777766666665555444332222111110000000
Q ss_pred --c-cCCCCC-ccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 --V-AAPPLR-SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 --~-~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
. ...... .....+++++.+||++||..+|++||++++++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 000000 1122348999999999999999999999999999997
No 113
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.1e-45 Score=323.66 Aligned_cols=287 Identities=34% Similarity=0.544 Sum_probs=223.5
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
.+.++|++.+.||+|++|.||++.+..+|+.+++|.+............+.+|+.+++.++|+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 568999999999999999999999999999999999865443333344566899999999999999999987543
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...++||||+.+++...+... ++...+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.+....
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 357999999999988887643 8899999999999999999999999999999999999999999999999998764
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
... ......+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...+.......+....+...+.........
T Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 170 TSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCC-CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 332 2233456788999999876 66899999999999999999999999988877777777665554432211110000
Q ss_pred cch--------------hhhccccCCC-CCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 243 PDY--------------VEYQYVAAPP-LRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 243 ~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
... ........+. ........++.+.++|.+||+.||++|||+.|+|.||||+.|...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~ 320 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP 320 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence 000 0000000000 000122357789999999999999999999999999999987653
No 114
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.4e-45 Score=323.75 Aligned_cols=275 Identities=24% Similarity=0.333 Sum_probs=209.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..|++++.||+|++|.||++.+..++..+++|..... ....|+.+++.++|+||+++++++...+..++|+|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 5699999999999999999999999999999975322 22468999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
++.|++.+++......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+..... .......
T Consensus 138 ~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~-~~~~~~~ 216 (357)
T PHA03209 138 HYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV-APAFLGL 216 (357)
T ss_pred ccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc-Ccccccc
Confidence 999999999987777899999999999999999999999999999999999999999999999999975422 2223345
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCC-CccCCCCc---------HHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSD---------IDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~-~pf~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.|++.|+|||.+.+ ..++.++|+||||+++|+|+++. ++|..... ...+..+....+.. +..++....
T Consensus 217 ~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 294 (357)
T PHA03209 217 AGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH-PEEFPRDPG 294 (357)
T ss_pred cccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC-hhhcCCCCc
Confidence 68899999999877 56899999999999999999865 44443221 12222233332222 222221110
Q ss_pred ccc---hhhhccccCCCCC----ccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 242 LPD---YVEYQYVAAPPLR----SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 242 ~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
... ..........+.. .....++..+.+||.+||+.||++|||++|+|+||||+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 295 SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000 0000000000000 0012467788899999999999999999999999999864
No 115
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.9e-45 Score=323.04 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=205.5
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHH-HHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|++|+||++.++.+|+.+++|.+....... .....+..|.. +++.++||||+++++.+.+.+..++||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999997643221 12223334444 56788999999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. .+.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (323)
T cd05575 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT 159 (323)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence 67666654 4468999999999999999999999999999999999999999999999999987543333333445688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~------------------------- 213 (323)
T cd05575 160 PEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL------------------------- 213 (323)
T ss_pred hhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence 99999999876 6688999999999999999999999988776665555443210
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH----HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~h~~~~~~~ 298 (314)
...+.+++.+.++|.+||+.||.+||++ .++++||||..+.
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~ 258 (323)
T cd05575 214 ---RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258 (323)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 1123458899999999999999999998 6999999998764
No 116
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.7e-45 Score=312.92 Aligned_cols=281 Identities=51% Similarity=0.890 Sum_probs=234.3
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
|+..+.||+|.+|.||++....+++.+++|.+............+..|+.+++.++|+|++++++++.+.+..++++|++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 67789999999999999999999999999999876544444456678999999999999999999999999999999999
Q ss_pred cccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 94 ~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
+++|.+.+......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+..............+
T Consensus 81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 160 (282)
T cd07829 81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV 160 (282)
T ss_pred CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence 99999999877557999999999999999999999999999999999999999999999999999876544433444556
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc-hhhhcccc
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-YVEYQYVA 252 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 252 (314)
+..|+|||.+.+...++.++|+||||++++++++|.+||...........+....+...+..|+....... ...+....
T Consensus 161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (282)
T cd07829 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP 240 (282)
T ss_pred CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC
Confidence 77899999987755789999999999999999999999999888888888888777666665554433321 11111111
Q ss_pred CCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 253 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
........+.++..+.++|.+||+.||++||++++++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 122223345568899999999999999999999999999997
No 117
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.1e-45 Score=321.00 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=203.0
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|++|.||++.++.+++.||+|.+....... .....+..|..+++.+ +||||+++++++...+..|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999999999999999998653322 2223456788888888 699999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence 776666544 469999999999999999999999999999999999999999999999999987533333333445688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcH--------HHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--------DQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...... ......... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~--------------- 220 (329)
T cd05588 160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---K--------------- 220 (329)
T ss_pred ccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---C---------------
Confidence 99999999876 66789999999999999999999999642211 111111100 0
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC------HHHHhcCccccccC
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRFAKSFN 298 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~h~~~~~~~ 298 (314)
.......++.++.++|.+||..||.+|++ ++++++||||..+.
T Consensus 221 ---------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~ 269 (329)
T cd05588 221 ---------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNID 269 (329)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence 01112346889999999999999999997 78999999998753
No 118
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.2e-44 Score=305.76 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=215.9
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||+|++|.||++.++.+++.+++|.+............+.+|+++++.++|||++++++++.+.+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 48889999999999999999999999999999976554444455677899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+.| +|.+++... ...+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+............
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 975 888888764 457899999999999999999999999999999999999999999999999999876544433344
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...........+......
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------- 219 (256)
T cd08529 161 IVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFP-------------------- 219 (256)
T ss_pred cccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--------------------
Confidence 567888999999876 56789999999999999999999999887755555444332111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+....+++++.+++.+||+.+|++||++.++++|||+
T Consensus 220 -------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 220 -------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 1112458899999999999999999999999999996
No 119
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.4e-44 Score=304.84 Aligned_cols=254 Identities=24% Similarity=0.414 Sum_probs=212.3
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-CCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e 91 (314)
+|++.+.||.|++|.||++.++.+++.+++|.+............+.+|++++++++|+|++++.+.+.. +...++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 5899999999999999999999999999999997655444444566789999999999999999998764 456899999
Q ss_pred cccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
+++| ++.+.+... ...+++..+..++.|++.|+++||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 9985 788777653 44689999999999999999999999999999999999999999999999999987654444444
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...+.......+......
T Consensus 161 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~------------------- 220 (257)
T cd08223 161 TLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP------------------- 220 (257)
T ss_pred cccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-------------------
Confidence 4567888999999876 66789999999999999999999999876655544443332110
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.....+++++.+++.+||+.||++||++.++++||||
T Consensus 221 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 --------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0112458899999999999999999999999999997
No 120
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.7e-45 Score=318.41 Aligned_cols=251 Identities=26% Similarity=0.417 Sum_probs=206.0
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhh-cCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||+||++.++.+++.||+|.+...... .........|..+++. ++||||+++++++.+.+..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999765321 1222334467777765 4899999999999999999999999985
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT 159 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence 777776643 458999999999999999999999999999999999999999999999999987643333333455688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||+|+++|+|++|..||......+....+...... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~-----~------------------ 215 (316)
T cd05619 160 PDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC-----Y------------------ 215 (316)
T ss_pred ccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----C------------------
Confidence 99999999876 56899999999999999999999999887766655554322100 0
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCHH-HHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ-QALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-ell~h~~~~~~~ 298 (314)
...++.++.++|.+||+.||++||++. +++.||||+.++
T Consensus 216 -----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 216 -----PRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred -----CccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 113588899999999999999999996 899999998864
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7.3e-45 Score=324.68 Aligned_cols=261 Identities=26% Similarity=0.344 Sum_probs=213.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|++.+.||+|+||.||++.++.+++.+++|.+...... ......+.+|..+++.++||||+++++.+.+++..++|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 58999999999999999999999999999999998753321 22223456889999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
|||++| +|.+++... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+........ .
T Consensus 122 ~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~ 199 (371)
T cd05622 122 MEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 199 (371)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence 999985 777777544 488999999999999999999999999999999999999999999999999987643322 2
Q ss_pred ccccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 FTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....||+.|+|||.+... ..++.++|+||||+++|+|++|..||...+.......+....... .++.
T Consensus 200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~~~------ 270 (371)
T cd05622 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL---TFPD------ 270 (371)
T ss_pred ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc---cCCC------
Confidence 2345689999999998653 237899999999999999999999999887776666654321111 1110
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~ 297 (314)
...++.++.++|.+||..++.+ |++++++++||||++.
T Consensus 271 ---------------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 271 ---------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred ---------------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 1246999999999999854443 7899999999999874
No 122
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7e-45 Score=320.05 Aligned_cols=252 Identities=24% Similarity=0.357 Sum_probs=201.8
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||+||++.++.+++.+++|.+....... .....+..|+.++..+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999998654322 2223455788887776 799999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 159 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence 676665543 469999999999999999999999999999999999999999999999999987543333333445688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc--------HHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--------IDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||..... .......... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---~--------------- 220 (329)
T cd05618 160 PNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---K--------------- 220 (329)
T ss_pred ccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---C---------------
Confidence 99999999976 6678999999999999999999999953211 1111111100 0
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC------HHHHhcCccccccC
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRFAKSFN 298 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~h~~~~~~~ 298 (314)
...+...++..+.++|++||..||.+||+ .+++++||||+.++
T Consensus 221 ---------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~ 269 (329)
T cd05618 221 ---------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 269 (329)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence 01122356889999999999999999998 58999999998763
No 123
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=319.67 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=238.1
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
.|.+=|.+.+-||+|-|..|-++++-.+|+.||+|++.+...+......+++|++.++..+|||||+++.+...+...|+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 35677999999999999999999999999999999999998888777788999999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE-ecCCcEEEeeccceeeeCCCCC
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~-~~~~~~~l~df~~~~~~~~~~~ 166 (314)
|.|.-+| +|.+++.+....++++.+.+++.||+.|+.|+|+..++|+||||+||++ .+-|-|||+|||++-.+ .+..
T Consensus 95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf-~PG~ 173 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF-QPGK 173 (864)
T ss_pred EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC-CCcc
Confidence 9999985 9999999888889999999999999999999999999999999999866 56799999999999766 3444
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....+|+..|.|||++.++.+..++.||||||||||-|++|++||...++.+++..++.+-.+.
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtv--------------- 238 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTV--------------- 238 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccC---------------
Confidence 55667889999999999998888999999999999999999999999999999999988763322
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
+..++.+.++||..||..||.+|.+.++|..|+|++.++
T Consensus 239 -------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 239 -------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred -------------chhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 235799999999999999999999999999999999986
No 124
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.9e-45 Score=320.09 Aligned_cols=287 Identities=41% Similarity=0.671 Sum_probs=235.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-----eEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 87 (314)
+|++.+.||.|++|.||++.+..+++.+++|.+............+.+|+.+++.++|+||+++.+++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 689999999999999999999888999999999765443444456778999999999999999999987664 789
Q ss_pred EEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC--
Q 021299 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-- 165 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-- 165 (314)
++|+|+++++.+.+.... .+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 999999998888876544 79999999999999999999999999999999999999999999999999998765443
Q ss_pred -CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 166 -RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 166 -~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.......+++.|+|||.+.+...++.++|+||||+++++|++|.+||......+....+....+...+..+........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 1233456788899999998744789999999999999999999999999998888888888776666554432111111
Q ss_pred h---hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 245 Y---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 245 ~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
. ...............+.+++.+.++|.+||+.+|++||++++++.||||+++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 1 1111112222333455679999999999999999999999999999999988644
No 125
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.3e-44 Score=311.78 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=215.9
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..+.|++++.||.|++|.||++.+..++..+++|.+.... ......+.+|+.+++.++|+|++++.+.+..++..++|
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 3578999999999999999999999999999999987542 22234566899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||++| ++...+.+....+++..+..++.|++.++.+||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 167 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR 167 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence 999997 5555565556679999999999999999999999999999999999999999999999999987654333333
Q ss_pred cccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....+++.|+|||.+.+ ...++.++|+||||+++|+|++|.+||...........+... ..+ ..
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~-~~-------- 235 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPP-TL-------- 235 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCc-cC--------
Confidence 44567888999998853 244688999999999999999999999776655444443221 110 00
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.....++.++.++|.+||+.+|++||+++++++||||+.+...
T Consensus 236 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 236 -------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred -------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 0112457889999999999999999999999999999987543
No 126
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.1e-46 Score=304.02 Aligned_cols=288 Identities=42% Similarity=0.732 Sum_probs=241.2
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-CC
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KG 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 84 (314)
-...|++++.||+|.+|.||+|..+.++. .+|+|+++........-....+|+..++.++|+|++.+..++.+ +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 35789999999999999999996555433 68999998876655566677799999999999999999998866 88
Q ss_pred eEEEEEecccccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC----CcEEEeecc
Q 021299 85 NLHLVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFG 156 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~----~~~~l~df~ 156 (314)
.+++++||.+-+|.+.++.. ...++...+..|+.||+.|+.|||++.+.||||||.||+|..+ |+|||+|+|
T Consensus 102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 99999999999999999632 3579999999999999999999999999999999999999877 899999999
Q ss_pred ceeeeCCCCC---cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC---------cHHHHHHH
Q 021299 157 LARIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---------DIDQLGKI 224 (314)
Q Consensus 157 ~~~~~~~~~~---~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~---------~~~~~~~~ 224 (314)
+++.+..+-. .....+.|.||.|||++.+...|+.+.|+|+.|||+.||++..+.|.+.+ ..+.+.++
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 9987754321 22345679999999999998999999999999999999999999996533 56788899
Q ss_pred HHhhCCCCCCCCCCcCcccchhhhcccc----CCC--CCcc---CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 225 FAAFGTATPSQWPDLAYLPDYVEYQYVA----APP--LRSL---FPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
+...+.+....||+....+.....-... ..+ +..+ ...-++...+|+.+||+-||-+|+|+++.++|+||.
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 9999999999999988888774322211 111 1111 122356699999999999999999999999999999
Q ss_pred cc
Q 021299 296 SF 297 (314)
Q Consensus 296 ~~ 297 (314)
..
T Consensus 342 ~d 343 (438)
T KOG0666|consen 342 ED 343 (438)
T ss_pred cC
Confidence 77
No 127
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.9e-45 Score=325.72 Aligned_cols=260 Identities=26% Similarity=0.396 Sum_probs=212.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++++.||+|++|+||++.++.+++.+++|.+..... .......+..|..++..++|++|+++++.+++.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 479999999999999999999999999999999975432 2223345667999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC----
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~---- 165 (314)
||++| +|.+.+.+. +.+++..+..++.|++.||.+||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 99986 777777654 458999999999999999999999999999999999999999999999999986432110
Q ss_pred -------------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCC
Q 021299 166 -------------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG 214 (314)
Q Consensus 166 -------------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~ 214 (314)
.......||+.|+|||++.+ ..++.++|+|||||++|+|++|.+||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCC
Confidence 00113468899999999876 6688999999999999999999999988
Q ss_pred CCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcC
Q 021299 215 SSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEH 291 (314)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h 291 (314)
.........+....... ..+. ...+++++.+||.+|+ .||.+|++ ++++++|
T Consensus 239 ~~~~~~~~~i~~~~~~~---~~p~---------------------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRKVMNWKETL---VFPP---------------------EVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHHHHcCCCce---ecCC---------------------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 87776665554321000 0100 1135889999999987 49999984 8999999
Q ss_pred ccccccC
Q 021299 292 RFAKSFN 298 (314)
Q Consensus 292 ~~~~~~~ 298 (314)
|||++++
T Consensus 294 p~f~~~~ 300 (360)
T cd05627 294 PFFEGVD 300 (360)
T ss_pred CCCCCCC
Confidence 9999864
No 128
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.4e-44 Score=310.50 Aligned_cols=281 Identities=46% Similarity=0.820 Sum_probs=230.9
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEEEEEe
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVFE 91 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~iv~e 91 (314)
|.+.+.||+|++|.||++.+..+|+.+++|.+............+.+|+++++.++|+|++++++++... +..++++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 6789999999999999999999999999999987653333444667899999999999999999999877 89999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTH 170 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~ 170 (314)
|+++++.+.+......+++..++.++.||+.|+++||+.|++|+||+|+||+++.++.++|+|||.+........ ....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 999999988887766799999999999999999999999999999999999999999999999999987644321 1233
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.+...++.++|+||||+++++|++|..||...........+....+...+..++.............
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 45577899999887656678999999999999999999999999888888888877766666666665444322111111
Q ss_pred c--cCCCCCccCCC-CCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 V--AAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~--~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
. ....+...... .++.+.+++.+||+.+|++||+++++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 1 01111122233 38899999999999999999999999999997
No 129
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.5e-44 Score=305.54 Aligned_cols=254 Identities=26% Similarity=0.484 Sum_probs=215.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||+|++|.+|.+.+..+|+.+++|.+............+.+|+.+++.++|+||+++.+++.+.+..++++||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 58999999999999999999999999999999876544333444677899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+.| ++.+.+... ...+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 975 888887654 345889999999999999999999999999999999999999999999999999876544333334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...+..+....+......
T Consensus 161 ~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~-------------------- 219 (256)
T cd08218 161 CIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP-------------------- 219 (256)
T ss_pred ccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC--------------------
Confidence 567788999999876 56789999999999999999999999877766665555432111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......+.++.++|.+||+.+|++||++.++++||||
T Consensus 220 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 -------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 0112458899999999999999999999999999997
No 130
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-44 Score=311.81 Aligned_cols=263 Identities=28% Similarity=0.404 Sum_probs=217.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||.|++|.||++.+..++..+++|.+...... ....+..|+.+++.++|+||+++++.+..+...+++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEE--ELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHH--HHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 47899999999999999999999888999999998754322 2235668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|.+.+......+++..++.++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 99986 77777776666799999999999999999999999999999999999999999999999998876544433334
Q ss_pred ccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 170 HQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
...+++.|+|||.+.. ...++.++|+||||+++|+|++|..||...........+..... + ..
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~-~~--------- 228 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP---P-TL--------- 228 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC---C-Cc---------
Confidence 4567888999998752 24567899999999999999999999987765554444322110 0 00
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.....++.++.++|.+||+.+|++||+++++++||||.+..+-
T Consensus 229 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 271 (280)
T cd06611 229 ------------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDN 271 (280)
T ss_pred ------------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchh
Confidence 0112458899999999999999999999999999999987543
No 131
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-44 Score=333.28 Aligned_cols=278 Identities=23% Similarity=0.378 Sum_probs=211.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC------CCeeeeeceeccC-
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELIDAFPHK- 83 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~- 83 (314)
.++|++.+.||+|+||+||++.+..+++.||+|+++.... .......|+++++.+.| .+++.+.+++..+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK---YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh---hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 5789999999999999999999999999999999964321 11233456666666644 5688888888654
Q ss_pred CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCC--------------
Q 021299 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHG-------------- 148 (314)
Q Consensus 84 ~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~-------------- 148 (314)
++.++||++++++|.+.+... +.+++..+..++.||+.||.|||+ .||+|+||||+||+++.++
T Consensus 205 ~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 205 GHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred ceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 578999999999999988765 469999999999999999999998 5999999999999998765
Q ss_pred --cEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHH
Q 021299 149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFA 226 (314)
Q Consensus 149 --~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~ 226 (314)
.+||+|||.+.... .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||......+....+..
T Consensus 284 ~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~ 359 (467)
T PTZ00284 284 PCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK 359 (467)
T ss_pred CceEEECCCCccccCc---cccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 49999999886432 22334578999999999977 6789999999999999999999999999888888777766
Q ss_pred hhCCCCCCCCCCcCcccchhhh-----------------ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 227 AFGTATPSQWPDLAYLPDYVEY-----------------QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
..+..+. .|............ .......... ...++.+.+||.+||+.||.+|||++|+|
T Consensus 360 ~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 360 TLGRLPS-EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVRE--VIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HcCCCCH-HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhh--hhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 6554432 12111000000000 0000000000 01256788999999999999999999999
Q ss_pred cCccccccCc
Q 021299 290 EHRFAKSFNG 299 (314)
Q Consensus 290 ~h~~~~~~~~ 299 (314)
+||||+++..
T Consensus 437 ~Hp~~~~~~~ 446 (467)
T PTZ00284 437 THPYVLKYYP 446 (467)
T ss_pred cCccccccCC
Confidence 9999998643
No 132
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-44 Score=317.48 Aligned_cols=256 Identities=25% Similarity=0.363 Sum_probs=211.8
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 90 (314)
+|...+.||+|++|+||+|.++.+|+.||+|++...... ......+..|..+++.+. |++|+++.+++...+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 478899999999999999999999999999999764322 222234557888888876 577888999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|...+... +.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99985 777766544 4599999999999999999999999999999999999999999999999999876433333334
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+......
T Consensus 160 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~------------------- 219 (323)
T cd05615 160 TFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS------------------- 219 (323)
T ss_pred CccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------
Confidence 4568899999999876 66889999999999999999999999888776666665543111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
....++.++.+++.+||+.+|.+|++ .+++++||||+.++
T Consensus 220 ---------~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 220 ---------YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred ---------CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 11235889999999999999999997 47899999999874
No 133
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-44 Score=310.38 Aligned_cols=278 Identities=39% Similarity=0.645 Sum_probs=217.3
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccC--CeEEEEE
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK--GNLHLVF 90 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~--~~~~iv~ 90 (314)
|++.+.||+|++|.||++.+..++..+++|.+........ .....+|+..++++. |+|++++++++.++ +..++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 7889999999999999999999999999999876433222 223457888888885 99999999999877 8899999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
||++|++.+.+......+++..++.++.|++.||++||+.|++|+||+|+||+++. +.++|+|||.+........ ...
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-~~~ 157 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-YTE 157 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-cCC
Confidence 99999999998877667999999999999999999999999999999999999999 9999999999976533222 223
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc-hhhhc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD-YVEYQ 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 249 (314)
..+++.|+|||.+.....++.++|+||||+++|+|++|.+||...+..+....+....+...+........... .....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP 237 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence 45678899999876556678999999999999999999999998887777766665544333211000000000 00000
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.............++.++.++|.+||..+|++||++++++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 000111122234568999999999999999999999999999997
No 134
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.8e-44 Score=313.33 Aligned_cols=274 Identities=38% Similarity=0.684 Sum_probs=206.4
Q ss_pred eeeeCccccceEEEEEECC--CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeecee--ccCCeEEEEEec
Q 021299 17 REVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLHLVFEF 92 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--~~~~~~~iv~e~ 92 (314)
...||+|+||+||+|.++. ++..+++|.+..... ...+.+|+++++.++||||+++.+++ ..+...++++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3579999999999998654 567899998864422 23566899999999999999999987 345678999999
Q ss_pred ccccHHHHHHhC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE----ecCCcEEEeeccceee
Q 021299 93 METDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI----GSHGQLKLADFGLARI 160 (314)
Q Consensus 93 ~~g~l~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~----~~~~~~~l~df~~~~~ 160 (314)
+++++.+.+... ...+++..++.++.||+.||.|||++|++|+||||+||++ +.++.++|+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 999988887532 2358899999999999999999999999999999999999 4567899999999986
Q ss_pred eCCCCC---cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc---------HHHHHHHHHhh
Q 021299 161 FGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---------IDQLGKIFAAF 228 (314)
Q Consensus 161 ~~~~~~---~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~---------~~~~~~~~~~~ 228 (314)
...... ......+++.|+|||.+.+...++.++||||||+++|+|++|.+||..... ......+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 543221 223346788899999987756789999999999999999999999975432 23444555555
Q ss_pred CCCCCCCCCCcCcccchhhhcccc----C--C----CCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYVA----A--P----PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~----~--~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+......|+.....+......... . . .........+..+.+|+.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 555554444332222111111000 0 0 0011112346779999999999999999999999999998
No 135
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-44 Score=319.64 Aligned_cols=287 Identities=38% Similarity=0.669 Sum_probs=224.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----C
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK-----G 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 84 (314)
++++|.+.+.||+|++|.||++.+..+|+.|++|.+...... .....+.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ-TFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccc-hhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 568999999999999999999999999999999998643222 2233566899999999999999999876433 3
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
..++++|++++++...+... .+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 58999999999988877543 4899999999999999999999999999999999999999999999999999765432
Q ss_pred CC---cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 165 DR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 165 ~~---~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.. ......+++.|+|||.+.+...++.++|+||||+++|+|++|.+||...+.......+....+...++.+.....
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 21 112346788899999876656689999999999999999999999988777777766666655544433321111
Q ss_pred ccchhh---hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 242 LPDYVE---YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 242 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
...... .......+.....+.+++++.+++.+||+.||++|||+.|+++||||+.+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 000000 0000111111223456889999999999999999999999999999998764
No 136
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-44 Score=316.75 Aligned_cols=284 Identities=25% Similarity=0.389 Sum_probs=214.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++.+..++..+++|.+..... ......+.+|+++++.++|+||+++++++.+++..+++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 5899999999999999999999999999999998876432 223345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||+.| +|.+++... +.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ..
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~ 159 (333)
T cd06650 83 EHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MA 159 (333)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--cc
Confidence 99985 787777654 3589999999999999999999985 7999999999999999999999999998654222 12
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC-cccc---
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA-YLPD--- 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 244 (314)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+ .......+....... ....
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 160 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF-GCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred ccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHh-cCcccCCccccccCcccCCccch
Confidence 33467888999999876 56889999999999999999999999776543332221 110111000000000 0000
Q ss_pred -----------h---hhhccccCCCCCcc-CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 245 -----------Y---VEYQYVAAPPLRSL-FPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 245 -----------~---~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
. ...........+.. ....+.++.+||.+||+.||++|||++|++.||||+.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~ 308 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEAE 308 (333)
T ss_pred hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCccc
Confidence 0 00000000000111 12357899999999999999999999999999999976543
No 137
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.9e-45 Score=320.18 Aligned_cols=250 Identities=26% Similarity=0.371 Sum_probs=204.6
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHH-HHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||+||++.++.+|+.+++|++...... ......+..|.. +++.++||||+++++.+..++..++||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999999999999999999764321 122223344444 56778999999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. .+.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (325)
T cd05604 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT 159 (325)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence 66666554 4469999999999999999999999999999999999999999999999999987543333333455688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~------------------------- 213 (325)
T cd05604 160 PEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL------------------------- 213 (325)
T ss_pred hhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-------------------------
Confidence 99999999876 6678999999999999999999999988776665555433210
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH----HHHhcCcccccc
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRFAKSF 297 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~h~~~~~~ 297 (314)
...+..+..+.++|++||..||.+||++ .++++||||+..
T Consensus 214 ---~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 214 ---VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred ---cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 0112458899999999999999999987 589999999875
No 138
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.8e-45 Score=322.11 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=203.5
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhc---CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL---KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
||+|+||+||+++++.+|+.+|+|.+....... ........|..++... .||+|+++.+.+......++||||+.|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999986543211 1122333566666555 699999999999999999999999985
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. .+.+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 67666654 4468999999999999999999999999999999999999999999999999987543333333455688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+...++.++||||||+++|+|++|..||...+..+....+...... ++
T Consensus 160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~-----~~----------------- 217 (330)
T cd05586 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR-----FP----------------- 217 (330)
T ss_pred ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC-----CC-----------------
Confidence 99999999876566899999999999999999999999887766655554322110 00
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCC----CHHHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARI----TAQQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~ell~h~~~~~~~ 298 (314)
...+++++.++|.+||..||.+|| +++++++||||....
T Consensus 218 -----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 218 -----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred -----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 013588999999999999999998 799999999998653
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.7e-44 Score=303.09 Aligned_cols=255 Identities=26% Similarity=0.462 Sum_probs=210.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC---cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
+.|.+.+.||+|++|.||.+.+..++..+++|.+........ ....+.+|++++++++||||+++++++.++...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 579999999999999999999988999999999876543222 12356689999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
++|+++| ++.+.+... +.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 9999986 777776654 45899999999999999999999999999999999999999999999999999765332211
Q ss_pred c---cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 F---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ~---~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
. ....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+............ ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~----------- 225 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP---TN----------- 225 (263)
T ss_pred cccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC---CC-----------
Confidence 1 23456778999999977 558899999999999999999999998766555444332211 11
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......+++.+.++|.+||..+|.+|||+.++++||||
T Consensus 226 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 226 ------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 11123468899999999999999999999999999997
No 140
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.8e-43 Score=300.26 Aligned_cols=254 Identities=27% Similarity=0.453 Sum_probs=218.7
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|+..+.||.|++|.||.+++..++..+++|.+............+.+|++++++++|+||+++++++.+++..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 58999999999999999999999999999999977655555555677999999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
++| +|.+.+... ...+++..+..++.|++.++++||+.|++|+||+|+||+++.++.++|+|||.+............
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 985 888888765 456899999999999999999999999999999999999999999999999999876444433445
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|.|||.+.+ ..++.++|+||||+++++|++|..||......+....+.......
T Consensus 161 ~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~------------------- 220 (256)
T cd08221 161 VVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP------------------- 220 (256)
T ss_pred cCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-------------------
Confidence 567889999999876 557899999999999999999999998877777666654321111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....++.++.+++.+||..+|++||+++++++|||+
T Consensus 221 --------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 --------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred --------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 113458899999999999999999999999999996
No 141
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.1e-44 Score=315.03 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=203.5
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|++|+||++.+..+++.+++|.+....... .....+.+|..++..+ .||+|++++++++..+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999998653322 2223456788888888 599999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+... +.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT 159 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence 676666544 459999999999999999999999999999999999999999999999999997543333333456689
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC------cHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS------DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||.... ........... . +.
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~-~~-------------- 220 (327)
T cd05617 160 PNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---K-PI-------------- 220 (327)
T ss_pred cccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---C-CC--------------
Confidence 99999999876 667999999999999999999999995422 11112221111 0 00
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC------HHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~h~~~~~~~ 298 (314)
.....++..+.+++.+||..||.+|++ .+++++||||+.++
T Consensus 221 ---------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 221 ---------RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred ---------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 112346889999999999999999998 57999999999874
No 142
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=8.8e-44 Score=306.63 Aligned_cols=260 Identities=27% Similarity=0.393 Sum_probs=213.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+.|++.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+++++.++|+|++++++++...+..++++|
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH--HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 458899999999999999999999999999999864432 223356689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|++| ++...+......+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+............
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 162 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence 9986 565666555667999999999999999999999999999999999999999999999999998765433333344
Q ss_pred cccCccccCccccc----CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 171 QVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 171 ~~~~~~y~sPE~~~----~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
..+++.|+|||.+. ....++.++|+||+|+++|+|++|.+||...........+.........
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 229 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA------------- 229 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCC-------------
Confidence 56788899999874 2345678999999999999999999999877665555554332111100
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
....++.++.++|.+||..||++||+++++++||||+...
T Consensus 230 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 230 ------------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred ------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 1123588999999999999999999999999999998654
No 143
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.7e-44 Score=305.69 Aligned_cols=259 Identities=29% Similarity=0.427 Sum_probs=216.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||.|++|.||++.+..+++.+++|.+..... ......+.+|+++++.++|+|++++.+++.++...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 579999999999999999999999999999999875532 2223356689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
++.| +|.+.+... .+++..++.++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||.+............
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 9986 777777654 6899999999999999999999999999999999999999999999999999887654444445
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+... .+...+
T Consensus 158 ~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----~~~~~~------------- 219 (274)
T cd06609 158 FVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN----NPPSLE------------- 219 (274)
T ss_pred ccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc----CCCCCc-------------
Confidence 667888999999877 45899999999999999999999999876654443333222 111110
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
...+++++.+++.+||..||++|||++++++||||+.....
T Consensus 220 ---------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 220 ---------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred ---------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 01158889999999999999999999999999999976543
No 144
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.7e-44 Score=315.99 Aligned_cols=264 Identities=23% Similarity=0.324 Sum_probs=215.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|+||+||+++++.+++.+++|.+...... ......+.+|..++..++|++|+++.+.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 5799999999999999999999999999999998653221 122234567888999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cc
Q 021299 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RF 168 (314)
Q Consensus 91 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~ 168 (314)
||+. |+|.+++......+++..+..++.||+.||.+||++|++|+||||+||+++.++.++|+|||.+........ ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 9997 588888877666799999999999999999999999999999999999999999999999999875433222 22
Q ss_pred cccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....|++.|+|||.+.. ...++.++|+||||+++|+|++|..||...+..+....+....... .+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~~-------- 229 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF---QF-------- 229 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc---cC--------
Confidence 23568999999999863 3457899999999999999999999998887777666654321110 01
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCccccccC
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSFN 298 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~~ 298 (314)
+.....+++++.+|+++||+.++.+ |++++++++||||++++
T Consensus 230 ------------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 230 ------------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred ------------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 1112346899999999999765554 78999999999999763
No 145
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=9.1e-44 Score=305.80 Aligned_cols=254 Identities=27% Similarity=0.379 Sum_probs=203.3
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||+|+||+||++..+.+|+.+++|.+........ .......|+++++.++||||+++.+.++.+.+.+++|||+.| +|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 7999999999999999999999999975433221 222345699999999999999999999999999999999985 77
Q ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCcc
Q 021299 98 ETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176 (314)
Q Consensus 98 ~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~ 176 (314)
...+... ...+++..+..++.|++.||++||+.|++|+||||+||+++.++.++|+|||.+...... .......+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccCCCCC
Confidence 7776543 345899999999999999999999999999999999999999999999999999765432 22234567888
Q ss_pred ccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCC
Q 021299 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256 (314)
Q Consensus 177 y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (314)
|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+.........
T Consensus 160 y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------- 215 (277)
T cd05607 160 YMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV----------------------- 215 (277)
T ss_pred ccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-----------------------
Confidence 999999877 55899999999999999999999999765433222222221111000
Q ss_pred CccCCCCCHHHHHHHhhhcccCCCCCCCH----HHHhcCccccccC
Q 021299 257 RSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRFAKSFN 298 (314)
Q Consensus 257 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~h~~~~~~~ 298 (314)
......+++++.+|+.+||+.||.+||++ ++++.||||+.++
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 00012468899999999999999999999 6788999999875
No 146
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.9e-44 Score=329.51 Aligned_cols=262 Identities=26% Similarity=0.391 Sum_probs=216.5
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---- 84 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 84 (314)
...++|.+.+.||+|+||+||++.+..+|+.||+|.+............+.+|+..+..++|++++++...+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3458999999999999999999999999999999999876554444445668999999999999999988763221
Q ss_pred ----eEEEEEeccc-ccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecc
Q 021299 85 ----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (314)
Q Consensus 85 ----~~~iv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~ 156 (314)
..++||||+. |+|.+.+... ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 3689999998 4888887643 3468999999999999999999999999999999999999999999999999
Q ss_pred ceeeeCCC--CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 157 LARIFGSP--DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 157 ~~~~~~~~--~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
++...... ........|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...........+.....
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~----- 262 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY----- 262 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-----
Confidence 99765332 122234568899999999976 6689999999999999999999999988766555554433211
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.+..+.+++++.+++.+||+.||.+||++.++++|||++.+.
T Consensus 263 ----------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 263 ----------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 111235689999999999999999999999999999988754
No 147
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.7e-44 Score=323.41 Aligned_cols=276 Identities=22% Similarity=0.292 Sum_probs=210.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
...|.+.+.||+|++|.||++.+..++..|++|.... ....+|++++++++|+||+++++++..++..+++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4579999999999999999999999999999996422 23458999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--cc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF 168 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~ 168 (314)
+++.++|..++......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++....... ..
T Consensus 240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 319 (461)
T PHA03211 240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319 (461)
T ss_pred EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence 9999999999887766799999999999999999999999999999999999999999999999999976533211 12
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCc-cCCCCc------HHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSD------IDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~p-f~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
....|++.|+|||.+.+ ..++.++|||||||++|+|++|..+ |..... ...+.+++....... ..++....
T Consensus 320 ~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~ 397 (461)
T PHA03211 320 YGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHV-DEFPQHAG 397 (461)
T ss_pred cccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccc-ccCCCCcc
Confidence 23468999999999977 6689999999999999999988743 433211 223333333222111 11111100
Q ss_pred ---ccchhhh-----ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 242 ---LPDYVEY-----QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 242 ---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
....... ...........+..++..+.+||++||+.||.+|||++|+|+||||++
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0000000 000000001112246778999999999999999999999999999974
No 148
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.9e-44 Score=315.68 Aligned_cols=263 Identities=23% Similarity=0.315 Sum_probs=214.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||+|+||+||+++++.+++.+|+|.+...... ......+.+|..++..++|++|+++.+++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5899999999999999999999999999999998753221 122234557889999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-c
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-F 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~ 168 (314)
||+.| +|.+++......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......... .
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 99975 888888776667999999999999999999999999999999999999999999999999999766433221 2
Q ss_pred cccccCccccCcccccCc----cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVFARWYRAPELLFGA----KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~----~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....|++.|+|||.+.+. ..++.++|+||||+++|+|++|..||...+..+....+....... .
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~--------- 228 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF---Q--------- 228 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc---c---------
Confidence 234688999999988642 346889999999999999999999998877666665554321110 0
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCC--CCCHHHHhcCcccccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKA--RITAQQALEHRFAKSF 297 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~h~~~~~~ 297 (314)
++.....+++++.++|.+||+.++++ |+++++++.||||+..
T Consensus 229 -----------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 229 -----------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred -----------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 11112346899999999999976655 5789999999999875
No 149
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.5e-44 Score=317.03 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=203.9
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHH-HHHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|++|.||++.+..+|+.+++|.+...... ......+..|. .+++.++||||+++.+.+.+.+..++||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999999754321 11222333444 467888999999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05603 81 GELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT 159 (321)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence 66666654 4468999999999999999999999999999999999999999999999999987543333333445688
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-----~-------------------- 213 (321)
T cd05603 160 PEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP-----L-------------------- 213 (321)
T ss_pred cccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC-----C--------------------
Confidence 99999999876 668899999999999999999999998877655555443220 0
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCH----HHHhcCccccccC
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRFAKSFN 298 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~h~~~~~~~ 298 (314)
...+..+.++.++|.+||+.||.+||++ .++++|+||..++
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~ 258 (321)
T cd05603 214 ---QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPIN 258 (321)
T ss_pred ---CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCC
Confidence 1122458899999999999999999976 4999999998654
No 150
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2e-44 Score=316.81 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=204.5
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHH-HHHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREI-KLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||+||++++..+++.+++|++...... ......+..|. .+++.++|+||+++++++...+..++||||+.|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4799999999999999999999999999764321 11122333333 456778999999999999999999999999986
Q ss_pred -cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 96 -DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 96 -~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
+|...+.. .+.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..............|+
T Consensus 81 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 159 (325)
T cd05602 81 GELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT 159 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence 67666654 4458899999999999999999999999999999999999999999999999987543333334455689
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
+.|+|||.+.+ ..++.++||||||+++|+|++|.+||......+....+.....
T Consensus 160 ~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~------------------------- 213 (325)
T cd05602 160 PEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL------------------------- 213 (325)
T ss_pred ccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-------------------------
Confidence 99999999876 6788999999999999999999999988776666555433210
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCHH----HHhcCcccccc
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQ----QALEHRFAKSF 297 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~----ell~h~~~~~~ 297 (314)
...+.++..+.++|.+||+.||.+||++. ++++|+||..+
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 214 ---QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred ---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 11234689999999999999999999876 89999999875
No 151
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-44 Score=320.48 Aligned_cols=280 Identities=26% Similarity=0.333 Sum_probs=215.2
Q ss_pred HHHhhccceeeeCccccceEEEEEECC--CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.+..+|.+++.||+|++|.||++.... ++..+++|.+.... ...+|+++++.++||||+++++++......
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 346789999999999999999997543 45789999875431 234799999999999999999999999999
Q ss_pred EEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
+++||++.+++..++. ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 162 ~lv~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 162 CMVMPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred EEEehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9999999999999884 445699999999999999999999999999999999999999999999999999976543222
Q ss_pred --cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC---cHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 167 --RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 167 --~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
......|++.|+|||.+.+ ..++.++||||||+++|+|++|..||.... ....+..+....+..+.. ++....
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~-~~~~~~ 318 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE-FPQNGS 318 (392)
T ss_pred cccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc-cCCccc
Confidence 2234568899999999876 668899999999999999999999996644 344455555544433222 221111
Q ss_pred cc---chhhhccccCCC--CCcc--CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 242 LP---DYVEYQYVAAPP--LRSL--FPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 242 ~~---~~~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.. ....+.....++ .+.. ....+.++.++|.+||+.||++|||+.|+|.||||++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 00 000111111110 0000 123577899999999999999999999999999998754
No 152
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9.8e-44 Score=311.10 Aligned_cols=282 Identities=40% Similarity=0.746 Sum_probs=215.4
Q ss_pred hccceeeeCccccceEEEEEECC--CCcEEEEEEeecCC-cccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~--~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~ 87 (314)
+|.+.+.||+|++|.||++.++. ++..|++|.+.... ..........+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58899999999999999999988 78999999998754 1222234556899999999999999999999877 7899
Q ss_pred EEEecccccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec----CCcEEEeecccee
Q 021299 88 LVFEFMETDLETVIRNT----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLAR 159 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~----~~~~~l~df~~~~ 159 (314)
+|||++++++.+.+... ...+++..++.++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||.+.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 99999999888877532 236899999999999999999999999999999999999999 8999999999998
Q ss_pred eeCCCCC---cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHH---------HHHHHHHh
Q 021299 160 IFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID---------QLGKIFAA 227 (314)
Q Consensus 160 ~~~~~~~---~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~---------~~~~~~~~ 227 (314)
....... ......+++.|+|||.+.+...++.++|+||||+++++|++|.+||....... ....+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 6543322 22334567889999988775678999999999999999999999997655432 33444444
Q ss_pred hCCCCCCCCCCcCcccchhhhccc-cCCCCC--------ccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYV-AAPPLR--------SLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.+...+..++.....+........ ...... ......+..+.+++.+||+.||.+|||+.|++.||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 443333322222111111110000 000000 0012568889999999999999999999999999998
No 153
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-43 Score=306.20 Aligned_cols=260 Identities=27% Similarity=0.383 Sum_probs=209.3
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.|++.+.||+|+||.||++.+..+++.+++|.+........ ....+.+|+.+++.++|++++++.+.+..++..+++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37888999999999999999999999999999876543222 12345579999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|+.| +|.+.+... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 159 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIK 159 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-ccc
Confidence 9985 777776543 3458999999999999999999999999999999999999999999999999987653222 223
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|+..|+|||.+.+ ..++.++|+||+|+++|+|++|..||.................. ..
T Consensus 160 ~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~---------------- 221 (285)
T cd05630 160 GRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQ---------------- 221 (285)
T ss_pred CCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hh----------------
Confidence 4468889999999876 66899999999999999999999999765432211111111000 00
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
......+++++.+|+.+||+.||++||| ++|+++||||+.+.
T Consensus 222 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05630 222 -------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN 268 (285)
T ss_pred -------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccC
Confidence 0112345889999999999999999999 99999999998764
No 154
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.7e-44 Score=318.28 Aligned_cols=289 Identities=36% Similarity=0.598 Sum_probs=228.5
Q ss_pred ccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
...++.++|.+.+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.+.|+|++++.+++...+.
T Consensus 9 ~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 9 TVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS 88 (343)
T ss_pred ceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence 34567899999999999999999999999999999999987543333333456689999999999999999998765544
Q ss_pred ------EEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 86 ------LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 86 ------~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.++++|+++++|.+.+... .+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 89 ~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 89 LEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 8999999998998888753 58999999999999999999999999999999999999999999999999997
Q ss_pred eeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCc
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
..... .....++..|+|||.+.+...++.++|+||||+++|+|++|..||...........+....+...+..+...
T Consensus 167 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 167 HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred ccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 65332 233456788999999876557789999999999999999999999988887777777665443332222211
Q ss_pred Ccccchhhh----ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 240 AYLPDYVEY----QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 240 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
... ....+ .......+......+++.+.++|.+||+.||.+|||+.+|+.||||+++...
T Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 244 SSE-SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred cch-hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 100 00000 0011111222234568999999999999999999999999999999988654
No 155
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.8e-43 Score=302.19 Aligned_cols=257 Identities=28% Similarity=0.396 Sum_probs=209.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||+|++|.||++.+..+++.+++|.+...... ....+.+|+.+++.++||||+++++.+...+..++++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE--DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 47999999999999999999999999999999998765322 2234568999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+++ +|.+++... +.+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 86 EFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred eccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 99986 777766544 4689999999999999999999999999999999999999999999999999977654433344
Q ss_pred ccccCccccCccccc--CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 170 HQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~--~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
...+++.|+|||.+. ....++.++|+||||+++|+|++|..||....+.......... ...+....
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~---------- 232 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--NFQPPKLK---------- 232 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--CCCCCccc----------
Confidence 557888999999874 2345788999999999999999999998765544433332211 11111000
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRF 293 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 293 (314)
....++..+.++|.+||..+|++||++++++.|||
T Consensus 233 -----------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 233 -----------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -----------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 01135788999999999999999999999999998
No 156
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6e-44 Score=315.40 Aligned_cols=290 Identities=40% Similarity=0.695 Sum_probs=228.0
Q ss_pred cHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc--C
Q 021299 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH--K 83 (314)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~--~ 83 (314)
...+.++|++.+.||+|++|.||++.+..+|+.+++|++............+.+|+.+++.+ +|+||+++++++.. .
T Consensus 2 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred CchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 45688999999999999999999999988899999999865432222333556899999999 99999999998754 3
Q ss_pred CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 84 ~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
...++||||++++|...+... .+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 82 KDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred ceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 468999999999998888765 588899999999999999999999999999999999999999999999999976533
Q ss_pred CCC-----cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 164 PDR-----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 164 ~~~-----~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
... ......++..|+|||.+.+...++.++|+||||+++|+|++|..||..........++....+......+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 221 222345788899999887656788999999999999999999999998888877777766654433222111
Q ss_pred cCcccc---hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 239 LAYLPD---YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 239 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
...... ................+.++.++.++|.+||+.||++|||+.++++|||++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 100000 000111111222333455799999999999999999999999999999999884
No 157
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-43 Score=301.08 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=211.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++....++..+++|.+..... ...+.+|+++++.++|+|++++.+.+......++++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 689999999999999999999988899999999875432 4467789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+++| +|.+.+......+++..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||.+............
T Consensus 79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 9996 787777766777999999999999999999999999999999999999999999999999999876443333334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.+ ..++.++|+||+|+++++|++|..||...........+.. .....+
T Consensus 159 ~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~-------------- 219 (256)
T cd06612 159 VIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN----KPPPTL-------------- 219 (256)
T ss_pred ccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc----CCCCCC--------------
Confidence 557788999999876 5678999999999999999999999976554433222111 000000
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.....++.++.++|.+||+.||++|||+.|++.||||
T Consensus 220 -------~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 220 -------SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -------CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0112357899999999999999999999999999997
No 158
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.2e-43 Score=301.32 Aligned_cols=260 Identities=27% Similarity=0.392 Sum_probs=214.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||.|++|+||++....++..+++|.+....... ....+.+|+..++.++|+|++++++.+...+..++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 57999999999999999999988889999999987554333 34567789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-
Q 021299 92 FMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (314)
Q Consensus 92 ~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~- 167 (314)
++.| ++.+.+... ...+++..+..++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 9986 777777653 246899999999999999999999999999999999999999999999999998765433222
Q ss_pred ---ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 ---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ---~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....++..|+|||.+.....++.++|+||||+++++|++|..||..........+..... +..++..
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~----- 230 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND----PPSLETG----- 230 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC----CCCcCCc-----
Confidence 2334578889999998775578999999999999999999999998766555444433321 1111100
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
..+..+++.+.+++.+||..||++||++++++.||||
T Consensus 231 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 231 -------------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------------cccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0123568999999999999999999999999999997
No 159
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-43 Score=307.23 Aligned_cols=264 Identities=30% Similarity=0.481 Sum_probs=216.3
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
...++|++.+.||+|++|.||++.+..+++.+++|.+...... ....+.+|+.+++.++|+||+++++++..++..++
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 3468999999999999999999999899999999998754332 23456689999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
||||++| ++.+.+.+. .+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 9999986 777776543 4789999999999999999999999999999999999999999999999999876444333
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+... +.. +
T Consensus 172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~~-~-------------- 234 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP-E-------------- 234 (297)
T ss_pred cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CCC-C--------------
Confidence 344567888999999876 66789999999999999999999999765543322211110 000 0
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
......+++.+.+|+.+||..+|++||++++++.||||+.......
T Consensus 235 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 235 ---------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred ---------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 0112245888999999999999999999999999999997765554
No 160
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.7e-43 Score=300.06 Aligned_cols=257 Identities=32% Similarity=0.422 Sum_probs=212.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||.|++|.||++.+..+++.+++|.+...... ....+.+|+++++.++||||+++++++...+..+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 6899999999999999999999888999999999765433 33567789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|++| ++...+......+++..+..++.|++.|+++||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 9996 677766665567999999999999999999999999999999999999999999999999998765443323344
Q ss_pred cccCccccCcccccCc--cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 171 QVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~--~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
..++..|+|||.+.+. ..++.++|+||||+++++|++|.+||...........+..... .+...
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~------------ 226 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNF--PPPKL------------ 226 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--CCccc------------
Confidence 5677889999998652 2678899999999999999999999987765555444322210 00000
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRF 293 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 293 (314)
.....++.++.+++.+||..+|++|||+.+++.|+|
T Consensus 227 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 227 ---------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ---------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 001234778999999999999999999999999998
No 161
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.6e-43 Score=303.34 Aligned_cols=262 Identities=26% Similarity=0.382 Sum_probs=214.7
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.|+..+.||+|+||+||.+.+..+++.+++|.+........ ....+.+|+++++.++|++++++.+.+..++..+++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47888999999999999999999999999999876533222 22345679999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|+.| ++...+... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+...... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~ 159 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIR 159 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-Cccc
Confidence 9986 676666543 346999999999999999999999999999999999999999999999999999765322 2223
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+.........
T Consensus 160 ~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~---------------- 222 (285)
T cd05632 160 GRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE---------------- 222 (285)
T ss_pred CCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc----------------
Confidence 4568899999999876 56889999999999999999999999877655544444332211111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccCcc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFNGV 300 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~~~ 300 (314)
.....+++++.+|+.+||+.||.+||+ +.+++.|+||+.+...
T Consensus 223 --------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 223 --------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred --------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 112345889999999999999999999 8899999999988543
No 162
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-43 Score=304.24 Aligned_cols=260 Identities=32% Similarity=0.510 Sum_probs=215.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.+|++.+.||.|++|+||++.+..+|+.+++|.+..... .....+.+|+.+++.++|+|++++++++..+...++++|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 579999999999999999999999999999999875432 223456789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|+.| +|...+... .+++..+..++.|++.|+++||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 97 ~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 97 YLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred ecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 9986 666655433 4899999999999999999999999999999999999999999999999998765443333334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+... .. ...
T Consensus 175 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~-~~~---------------- 235 (296)
T cd06655 175 MVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT-PEL---------------- 235 (296)
T ss_pred cCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC-ccc----------------
Confidence 567888999999876 56789999999999999999999999887765554433221 00 000
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
.....+++.+.++|.+||..||++||++.+++.||||+......
T Consensus 236 -------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~~ 279 (296)
T cd06655 236 -------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLS 279 (296)
T ss_pred -------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccccc
Confidence 01124688999999999999999999999999999999766543
No 163
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.3e-43 Score=313.73 Aligned_cols=285 Identities=34% Similarity=0.634 Sum_probs=218.9
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 83 (314)
+.++|.+.+.||.|++|.||++.++.+|+.+++|.+..... .....+.+|+++++.++||||+++++++...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 46899999999999999999999999999999999876543 2334566899999999999999999876543
Q ss_pred --------CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEee
Q 021299 84 --------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLAD 154 (314)
Q Consensus 84 --------~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~d 154 (314)
...++++||+++++.+.+... .+++..++.++.||+.||.+||++|++|+||+|+||+++. ++.++|+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 357899999999888777543 5899999999999999999999999999999999999974 55789999
Q ss_pred ccceeeeCCCCC---cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCC
Q 021299 155 FGLARIFGSPDR---RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTA 231 (314)
Q Consensus 155 f~~~~~~~~~~~---~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 231 (314)
||.+........ ......++..|+|||.+.+...++.++|+||||+++|+|++|..||....+.+............
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999976532211 11223567789999987665678899999999999999999999998887777666655543322
Q ss_pred CCCCCCCcCcccch-hh-hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 232 TPSQWPDLAYLPDY-VE-YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 232 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.+............ .. .......+.....+.++.++.+||.+||+.||.+|||+.+++.||||+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 22111111000000 00 001111122223456789999999999999999999999999999999764
No 164
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.6e-43 Score=302.58 Aligned_cols=278 Identities=43% Similarity=0.790 Sum_probs=220.3
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc---CCCCeeeeeceeccCCe-----
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL---KSPHIIELIDAFPHKGN----- 85 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~i~~~~~~~~~~~~----- 85 (314)
|++.+.||.|++|.||++.++.+++.+++|.+............+.+|+.+++++ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6789999999999999999988899999999976554433333455677766665 59999999999877665
Q ss_pred EEEEEecccccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 86 LHLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 86 ~~iv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.+++||++++++.+.+.... ..+++..++.++.|++.||.+||+.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 99999999999888876643 36899999999999999999999999999999999999999999999999999876433
Q ss_pred CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
. ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|.+||......+...++...........++.......
T Consensus 161 ~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 161 M-ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred c-ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 2 2223346778999999876 5688999999999999999999999999888888888877655444333332211111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
...............+.+++.+.++|.+||+.||++||++++++.||||
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 239 -SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred -hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 1111111112223334567889999999999999999999999999997
No 165
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.6e-43 Score=303.74 Aligned_cols=263 Identities=27% Similarity=0.391 Sum_probs=208.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHH-HhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKL-LKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~-l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|+||.||++.++.+|+.||+|.+........ ...+..|... ++..+|||++++++++..++..+++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 479999999999999999999999999999999876543222 2234445554 66678999999999999999999999
Q ss_pred ecccccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMETDLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
||++|++.+.+.. ....+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 158 (283)
T cd06617 80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV- 158 (283)
T ss_pred hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence 9999988877754 345689999999999999999999997 99999999999999999999999999987653221
Q ss_pred cccccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCC-cHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 167 RFTHQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||.... ..+.......... ...+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~----- 229 (283)
T cd06617 159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS----PQLP----- 229 (283)
T ss_pred ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC----CCCC-----
Confidence 12224567789999988642 346889999999999999999999996532 3333333322111 1000
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
...++.++.++|.+||..+|++||+++++++||||+.......
T Consensus 230 -----------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~ 272 (283)
T cd06617 230 -----------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSKNT 272 (283)
T ss_pred -----------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccccH
Confidence 0135889999999999999999999999999999998875533
No 166
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-43 Score=301.42 Aligned_cols=260 Identities=28% Similarity=0.364 Sum_probs=208.6
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
..-.++|++.+.||+|++|.||++.+..+++.+++|++...... ....+.+|+.+++.++||||+++.+++...+..+
T Consensus 5 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06646 5 RNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLW 82 (267)
T ss_pred cCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Confidence 34568899999999999999999999999999999998754322 2235668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
+++||+++ +|.+.+... ..+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 83 iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999986 676666543 4689999999999999999999999999999999999999999999999999987644333
Q ss_pred cccccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
......+++.|+|||.+.. ...++.++|+||+|+++|+|++|..||....+......+..... .+..+
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~-------- 231 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF--QPPKL-------- 231 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCC--CCCCC--------
Confidence 3334567888999998753 24467899999999999999999999865543332222111100 00000
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRF 293 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 293 (314)
.....++..+.++|++||+.||++|||++++++|+|
T Consensus 232 -------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 232 -------------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -------------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 011245889999999999999999999999999997
No 167
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-43 Score=310.63 Aligned_cols=285 Identities=20% Similarity=0.205 Sum_probs=208.9
Q ss_pred ceeeeCcc--ccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 16 KREVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 16 ~~~~lg~g--~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
++++||+| ++++||++.++.+|+.|++|.+............+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56789999 6789999999999999999999766544433445667999999999999999999999999999999999
Q ss_pred cc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-----
Q 021299 94 ET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----- 166 (314)
Q Consensus 94 ~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~----- 166 (314)
++ ++.+++... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 161 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV 161 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence 85 777777543 34589999999999999999999999999999999999999999999999986543211110
Q ss_pred --cccccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCC-------CCCC
Q 021299 167 --RFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTAT-------PSQW 236 (314)
Q Consensus 167 --~~~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~ 236 (314)
......++..|+|||.+.+. ..++.++||||||+++|+|++|..||.................... ++..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
T cd08227 162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL 241 (327)
T ss_pred ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence 11123456679999998653 3578999999999999999999999986554443333222110000 0000
Q ss_pred C-------CcCcccchhh----hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 237 P-------DLAYLPDYVE----YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 237 ~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
. .......... ...............+++++.+|+.+||+.||++|||++|+++||||+.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~ 316 (327)
T cd08227 242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR 316 (327)
T ss_pred ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchh
Confidence 0 0000000000 00000011112233568899999999999999999999999999999987543
No 168
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-43 Score=324.20 Aligned_cols=257 Identities=23% Similarity=0.342 Sum_probs=212.8
Q ss_pred hhccceeeeCccccceEEEEEECCC-CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~-~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
..|.+.+.||.|++|.||.+.+..+ +..+++|.+..... .....+..|+.+++.++||||+++++++..++..|+||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~--~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE--RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4499999999999999999998877 77888887654322 12234557999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
||+.| +|.+.+.. ...++++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99985 88777643 345689999999999999999999999999999999999999999999999999987643221
Q ss_pred --cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 --RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 --~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
......|++.|+|||.+.+ ..++.++||||||+++|+|++|..||......+....+.......
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~------------- 290 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP------------- 290 (478)
T ss_pred cccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------------
Confidence 2234468999999999876 668999999999999999999999998877666555544321111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
....+++++.++|.+||..||++||++++++.|+|++...
T Consensus 291 --------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~~ 330 (478)
T PTZ00267 291 --------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVA 330 (478)
T ss_pred --------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHHH
Confidence 1124588999999999999999999999999999998653
No 169
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.7e-43 Score=313.01 Aligned_cols=285 Identities=36% Similarity=0.615 Sum_probs=222.8
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------ 83 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 83 (314)
+.++|.+.+.||+|++|.||+|.+..+|+.+++|.+............+.+|+.+++.++|+||+++.+++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 46899999999999999999999988999999999876543333344567899999999999999999988544
Q ss_pred CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 84 ~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
..+++++|++.+++.... +..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 93 ~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 346899999988776654 23589999999999999999999999999999999999999999999999999875422
Q ss_pred CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 164 ~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
......+++.|+|||.+.+...++.++|+||||+++|+|++|+.||...+.......+....+...+..++......
T Consensus 170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 170 ---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 22334567889999998765668899999999999999999999999887777777766655433332222111100
Q ss_pred chh---hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 244 DYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 244 ~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
... .........+....+.+++.+.+||.+||+.||.+||++++++.||||+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 000 000011111222234678899999999999999999999999999999998754
No 170
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-43 Score=336.43 Aligned_cols=269 Identities=26% Similarity=0.405 Sum_probs=217.5
Q ss_pred ccccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec--
Q 021299 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-- 81 (314)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-- 81 (314)
++-++...++|.+++.||.|+||+||++.+..++..+++|.+............+..|+.+++.++||||++++++|.
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de 84 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK 84 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence 344566678999999999999999999999999999999999876554444556778999999999999999999874
Q ss_pred cCCeEEEEEecccc-cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC-------CcccCCCCCCceEEecC---
Q 021299 82 HKGNLHLVFEFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKK-------WVLHRDMKPNNLLIGSH--- 147 (314)
Q Consensus 82 ~~~~~~iv~e~~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~-------~i~H~di~~~nil~~~~--- 147 (314)
....+|+||||+++ +|...+... .+.+++..++.|+.||+.||.|||+. +|+|+||||+|||++.+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 44678999999985 888887642 35699999999999999999999984 49999999999999642
Q ss_pred --------------CcEEEeeccceeeeCCCCCcccccccCccccCcccccC-ccCCCCcchHhhHHHHHHHHHhCCCcc
Q 021299 148 --------------GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFL 212 (314)
Q Consensus 148 --------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~-~~~~~~~~Di~slG~ll~~ll~g~~pf 212 (314)
+.++|+|||++....... ......+++.|+|||++.+ ...++.++|||||||+||+|++|..||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 348999999997654322 2344578999999999864 245789999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCc
Q 021299 213 QGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (314)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 292 (314)
........+....... +... ....+.++.+||..||..+|.+||++.|+|.||
T Consensus 244 ~~~~~~~qli~~lk~~---p~lp------------------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 244 HKANNFSQLISELKRG---PDLP------------------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred CcCCcHHHHHHHHhcC---CCCC------------------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 7665554443332211 1000 123488999999999999999999999999999
Q ss_pred cccccCcc
Q 021299 293 FAKSFNGV 300 (314)
Q Consensus 293 ~~~~~~~~ 300 (314)
|++.+...
T Consensus 297 ~ik~i~~p 304 (1021)
T PTZ00266 297 IIKNVGPP 304 (1021)
T ss_pred HHhhcCCC
Confidence 99877543
No 171
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-43 Score=303.24 Aligned_cols=259 Identities=30% Similarity=0.510 Sum_probs=213.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
..+|++.+.||+|++|.||++.+..++..+++|.+...... ....+.+|+.+++.+.|+|++++.+.+..+...++||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 47999999999999999999999999999999998764432 2345668999999999999999999999899999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+.| +|.+++... .+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 97 e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 97 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred cccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 99985 787777543 478999999999999999999999999999999999999999999999999876543333333
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||............... . .+ .
T Consensus 175 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~--~~-~-------------- 235 (296)
T cd06654 175 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-G--TP-E-------------- 235 (296)
T ss_pred cccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-C--CC-C--------------
Confidence 4567888999998876 56789999999999999999999999776654433222111 0 00 0
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
......+++.+.++|.+||..||++||++++++.||||.....
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 236 -------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 0112246888999999999999999999999999999986543
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.9e-43 Score=301.60 Aligned_cols=261 Identities=26% Similarity=0.380 Sum_probs=208.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||+|++|.||++.+..+++.+++|.+..... ......+.+|++++++++||||+++++++...+..++++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 478899999999999999999999999999999875432 2233457789999999999999999999999999999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
|++++.+... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... .....
T Consensus 80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (279)
T cd06619 80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTY 153 (279)
T ss_pred cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCC
Confidence 9997544433 24788999999999999999999999999999999999999999999999999765332 22345
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHH---HHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ---LGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
.++..|+|||.+.+ ..++.++|+||||+++|+|++|..||........ ............+...
T Consensus 154 ~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 220 (279)
T cd06619 154 VGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL------------ 220 (279)
T ss_pred CCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCC------------
Confidence 67888999999876 5689999999999999999999999865332111 0111111111111100
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
.....++++.++|.+||+.+|++||++++++.||||+..+....
T Consensus 221 ----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 221 ----------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred ----------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 01235889999999999999999999999999999998765544
No 173
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.9e-43 Score=298.65 Aligned_cols=254 Identities=28% Similarity=0.471 Sum_probs=211.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec--cCCeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~iv~ 90 (314)
+|.+.+.||.|++|.||++.+..++..+++|.+............+.+|+++++.++|+|++++++++. .....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 588999999999999999999999999999998766544444455678999999999999999999764 445789999
Q ss_pred ecccc-cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH-----hCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 91 EFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCH-----KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 91 e~~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh-----~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
||+++ +|.+.+... ...+++..++.++.||+.||.+|| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99985 788777653 457899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
...........+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...........+.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~-------- 227 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK----F-------- 227 (265)
T ss_pred cCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC----C--------
Confidence 554432344567888999999876 557899999999999999999999998876444433332211 1
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.......+..+.+++.+||..+|++||++++|++|||+
T Consensus 228 ---------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 ---------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ---------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 11122458899999999999999999999999999996
No 174
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.8e-43 Score=299.81 Aligned_cols=256 Identities=27% Similarity=0.375 Sum_probs=207.7
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH------ 82 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~------ 82 (314)
..+.|.+.+.||+|++|.||++.+..+++.+++|.+..... ....+..|+.+++.+ +|+|++++.+++..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 46889999999999999999999999999999999875432 223566889999988 69999999998854
Q ss_pred CCeEEEEEecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 83 KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
....+++|||+++ +|.+.+... ...+++..+..++.|++.|++|||+++++|+||+|+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 3468999999985 787777654 34689999999999999999999999999999999999999999999999999986
Q ss_pred eCCCCCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
............+++.|+|||.+.+ ...++.++|+||+|+++|+|++|..||............... ...
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~----~~~-- 234 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PAP-- 234 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC----CCC--
Confidence 5443333445567888999999863 235788999999999999999999999765544333322110 000
Q ss_pred CCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......++.++.+|+.+||..||.+|||+.+++.||||
T Consensus 235 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 235 --------------------RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred --------------------CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 00112457899999999999999999999999999997
No 175
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.5e-43 Score=307.46 Aligned_cols=288 Identities=35% Similarity=0.590 Sum_probs=225.2
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-CCeEE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGNLH 87 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 87 (314)
.+.++|.+.+.||.|++|.||++.+..+++.+++|++............+.+|+++++.++|||++++.+++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 36789999999999999999999999999999999987544333344566789999999999999999998855 56789
Q ss_pred EEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
+++|++++++...+... .+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+..... .
T Consensus 87 lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---~ 161 (328)
T cd07856 87 FVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---Q 161 (328)
T ss_pred EEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---C
Confidence 99999988888777643 478888999999999999999999999999999999999999999999999875422 1
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc---c
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP---D 244 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 244 (314)
.....+++.|+|||.+.+...++.++|+||||+++++|++|.+||...........+....+..+........... .
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 2234567789999988665678999999999999999999999998877766666555554443322211110000 0
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
..........+.....+.+++.+.++|++||+.+|++||++++++.||||..+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~ 298 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT 298 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCc
Confidence 001111111122233356789999999999999999999999999999998876543
No 176
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.4e-43 Score=299.23 Aligned_cols=253 Identities=25% Similarity=0.499 Sum_probs=207.3
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-------cchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-------VNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
+|++.+.||+|++|.||+|.+..++..+++|.+........ ....+.+|+.+++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 58899999999999999999988899999999876543222 11245579999999999999999999999999
Q ss_pred EEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.++++||++| +|.+++... +.+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 9999999986 777777654 46889999999999999999999999999999999999999999999999998766421
Q ss_pred CC------cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 165 DR------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 165 ~~------~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
.. ......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 229 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS--------- 229 (267)
T ss_pred cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---------
Confidence 11 1112346778999999876 5678899999999999999999999987655444433322110
Q ss_pred cCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......++..+.++|.+||+.||.+||++.++++||||
T Consensus 230 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 230 ------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 01112458899999999999999999999999999997
No 177
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.3e-43 Score=306.68 Aligned_cols=260 Identities=27% Similarity=0.412 Sum_probs=215.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||+|++|+||++.+..+++.+++|.+....... .....+.+|+++++.++|+||+++++.+.++...+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999998654332 23335668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--
Q 021299 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-- 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-- 166 (314)
||+.| +|.+.+... +..+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99986 888877654 35689999999999999999999999999999999999999999999999999865422111
Q ss_pred ---------------------------cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHH
Q 021299 167 ---------------------------RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID 219 (314)
Q Consensus 167 ---------------------------~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~ 219 (314)
......|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 1112356778999999876 567899999999999999999999998877666
Q ss_pred HHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC----HHHHhcCcccc
Q 021299 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT----AQQALEHRFAK 295 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~h~~~~ 295 (314)
....+..... .++. ...+++++.++|.+||..||++||+ +++++.||||+
T Consensus 240 ~~~~~~~~~~-----~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~ 293 (316)
T cd05574 240 TFSNILKKEV-----TFPG---------------------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293 (316)
T ss_pred HHHHHhcCCc-----cCCC---------------------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence 5554432111 0110 1125899999999999999999999 99999999999
Q ss_pred ccC
Q 021299 296 SFN 298 (314)
Q Consensus 296 ~~~ 298 (314)
+.+
T Consensus 294 ~~~ 296 (316)
T cd05574 294 GVN 296 (316)
T ss_pred cCC
Confidence 874
No 178
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.8e-43 Score=311.94 Aligned_cols=288 Identities=35% Similarity=0.563 Sum_probs=226.0
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC-----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK----- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 83 (314)
++.++|.+.+.||+|++|.||++.+..+|+.|++|++............+.+|+.++++++|+||+++.+++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 456999999999999999999999999999999999876433333334566899999999999999999987432
Q ss_pred -CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 -GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 -~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+++++++++++.+.+... .+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 94 ~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 94 FNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred cccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 357889999988888777643 48999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
. ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...........+....+...+..++.....
T Consensus 172 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
T cd07877 172 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 248 (345)
T ss_pred c---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccH
Confidence 2 2234467888999998876556789999999999999999999999888877777777666555444333322211
Q ss_pred cchh---hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 243 PDYV---EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 243 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
.... .................++++.++|.+||+.||.+||++.+++.||||+++....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 249 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred hHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence 1000 0011111112222335688999999999999999999999999999999876443
No 179
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.4e-43 Score=301.29 Aligned_cols=279 Identities=42% Similarity=0.699 Sum_probs=224.9
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEEec
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
|.+.+.||+|++|+||+|....+++.+++|.+....... ......+|+..++.++ |+|++++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 678899999999999999998889999999987543321 2223446889999999 99999999999999999999999
Q ss_pred ccccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 93 METDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 93 ~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
++|++.+.+.... ..+++..+..++.|++.+|.+||++|++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~ 158 (283)
T cd07830 80 MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-PYTDY 158 (283)
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-CcCCC
Confidence 9889998887654 568999999999999999999999999999999999999999999999999998664322 22345
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc--
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ-- 249 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (314)
.++..|+|||.+.....++.++|+||||+++++|++|.+||......+....+....+......|+............
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 677889999998765678999999999999999999999999998888888777776666554444322211111111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
...........+..+..+.++|.+||+.||++||+++|++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 111111222233457889999999999999999999999999997
No 180
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.9e-43 Score=302.56 Aligned_cols=262 Identities=28% Similarity=0.438 Sum_probs=211.3
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++++.||+|++|.||++.+..+|..+++|.+.... .......+.+|+.++++++|+||+++++.+..++..++++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 57999999999999999999999899999999986542 22223466789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 92 FMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 92 ~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
|++| ++..++... ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||.+...... .
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--L 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--c
Confidence 9997 676666543 2368999999999999999999997 59999999999999999999999999998765322 2
Q ss_pred ccccccCccccCcccccCcc-----CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 168 FTHQVFARWYRAPELLFGAK-----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~-----~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.....+++.|+|||.+.+.. .++.++|+||||+++|+|++|..||...........+....... +.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~-------- 228 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD-PP-------- 228 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC-CC--------
Confidence 22345677899999986522 35789999999999999999999997655444333332221111 11
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
...+.+++++.++|.+||+.+|++||++++++.||||......
T Consensus 229 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 229 ---------------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred ---------------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 1122468999999999999999999999999999999877543
No 181
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.4e-43 Score=312.12 Aligned_cols=286 Identities=38% Similarity=0.613 Sum_probs=222.1
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC----
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG---- 84 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 84 (314)
.+.++|++.+.||+|++|.||++.+..+|..|++|.+............+.+|+++++.++|+||+++.+++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3578999999999999999999999999999999998654333333345668999999999999999999886543
Q ss_pred --eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 85 --NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 85 --~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
.+++|+|++++++...+.. ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 92 ~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 92 FHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred cceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 4689999998888877764 358999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. .....+++.|+|||.+.+...++.++|+||||++++++++|..||...........+..................
T Consensus 170 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 170 SE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred cC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcch
Confidence 22 233456788999999876456789999999999999999999999887776666666554333221111111000
Q ss_pred cch---hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 243 PDY---VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 243 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
... ..........+....+.+++++.++|.+||..||++|||+.+++.||||+.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 000 000000111122334567889999999999999999999999999999998854
No 182
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.8e-43 Score=299.51 Aligned_cols=257 Identities=30% Similarity=0.413 Sum_probs=209.4
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH------ 82 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~------ 82 (314)
..++|++.+.||+|++|.||++.++.+++.+++|.+..... ....+.+|+.+++.+ .|+||+++++++..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 35899999999999999999999988899999999875543 234567899999998 69999999999854
Q ss_pred CCeEEEEEecccc-cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 83 KGNLHLVFEFMET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
....+++|||+++ +|.+.+... +..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 3458999999996 777666542 457899999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
..............+++.|+|||.+.. ...++.++|+||||+++++|++|..||...........+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~ 236 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP----PP 236 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC----CC
Confidence 776444444445667888999998753 2346789999999999999999999998665555444432211 11
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.+. .....++++.+||.+||..||++|||+.+++.|||+
T Consensus 237 ~~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 TLK---------------------SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CCC---------------------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 110 011357899999999999999999999999999996
No 183
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.5e-43 Score=302.94 Aligned_cols=254 Identities=26% Similarity=0.405 Sum_probs=214.3
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|.||++.+..+++.+++|.+....... .....+.+|++++++++||||+++++++.+++..+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999987543222 22345668999999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++ ++|.+.+... +.+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~ 156 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TY 156 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CC
Confidence 9996 5888887665 46899999999999999999999999999999999999999999999999999765433 23
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+ ...+.++|+||||+++|+|++|..||...+.......+.....
T Consensus 157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------- 215 (290)
T cd05580 157 TLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV-------------------- 215 (290)
T ss_pred CCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc--------------------
Confidence 3457888999998866 5678999999999999999999999987775555554432210
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.....+++.+.++|.+||+.||.+|+ +++|++.||||+...
T Consensus 216 --------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 216 --------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred --------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 01123488999999999999999999 999999999998765
No 184
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-42 Score=294.72 Aligned_cols=253 Identities=28% Similarity=0.452 Sum_probs=213.1
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||+|++|.||++.+..+++.+++|.+............+.+|+++++.++|||++++++.+..++..++|||+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 58999999999999999999999999999999987654444455677899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeeeCCCCCccc
Q 021299 93 MET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 93 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~ 169 (314)
++| +|.+.+... ...+++..+..++.+++.++++||++|++|+||+|+||+++.+ +.++|+|||.+....... ...
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-KAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-ccc
Confidence 986 888888764 3458999999999999999999999999999999999999865 468999999998764332 222
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...++..|+|||.+.+ ..++.++|+||+|+++++|++|..||...+.......+......
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 219 (256)
T cd08220 160 TVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA------------------- 219 (256)
T ss_pred ccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC-------------------
Confidence 3457788999999876 56789999999999999999999999877666555554332111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+....+++.+.+++.+||..+|++|||+.|++.||||
T Consensus 220 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 220 --------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred --------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1112458899999999999999999999999999997
No 185
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=308.98 Aligned_cols=246 Identities=24% Similarity=0.409 Sum_probs=210.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..++.++.||+|.||.||++.++.+ ..+++|.+....... ..+.+|++++++++|++|+++++++..++.+|||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 4567889999999999999987643 489999997654332 356799999999999999999999998889999999
Q ss_pred ccc-ccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-c
Q 021299 92 FME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-F 168 (314)
Q Consensus 92 ~~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~ 168 (314)
|+. |+|+++++. .+..++..+...++.||++|++||++++++||||-..||||+++..+||+|||+++..+.+... .
T Consensus 282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 998 899999997 5677999999999999999999999999999999999999999999999999999965443322 2
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.+...+.-|.|||.+.- ..++.+|||||+|++|+||+| |+.|++.....+.+..+.++..-+.|.
T Consensus 362 ~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~------------- 427 (468)
T KOG0197|consen 362 EGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE------------- 427 (468)
T ss_pred CCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC-------------
Confidence 22223455999999977 678999999999999999985 568989999999999988875544443
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
.+|+++.+++..||..+|++|||.+.+.
T Consensus 428 --------------~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 428 --------------GCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred --------------CCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 4689999999999999999999998654
No 186
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1e-42 Score=295.35 Aligned_cols=254 Identities=29% Similarity=0.504 Sum_probs=217.2
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||.|++|.||++.+..++..+++|.+............+.+|+++++.++|+|++++.+.+......++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 58899999999999999999998999999999987665545555677899999999999999999999888999999999
Q ss_pred ccc-cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 93 ~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
++| +|.+.+... ...+++..+..++.+++.|+.+||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 986 888888765 3679999999999999999999999999999999999999999999999999998765544333
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....+++.|+|||.+.+ ..++.++|+||+|+++++|++|..||...+............. ..
T Consensus 161 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~------------- 222 (258)
T cd08215 161 KTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----PP------------- 222 (258)
T ss_pred cceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC----CC-------------
Confidence 44567888999998866 5678999999999999999999999987775555554432211 11
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....++..+.+++.+||..+|++||+++++++||||
T Consensus 223 ----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 223 ----------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 112458899999999999999999999999999997
No 187
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7e-43 Score=307.93 Aligned_cols=287 Identities=39% Similarity=0.626 Sum_probs=225.4
Q ss_pred hccceeeeCccccceEEEEEECCC--CcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceec----cCCe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP----HKGN 85 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~----~~~~ 85 (314)
+|++.+.||+|++|.||++.+..+ +..+++|.+............+.+|+++++++ .||||+++++... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 588999999999999999999887 88999999875433333344566899999999 5999999998642 2346
Q ss_pred EEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 86 LHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 86 ~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
.++++++++++|...+... ..+++..+..++.||+.||.+||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 7899999999998888654 458999999999999999999999999999999999999999999999999997653321
Q ss_pred C----cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 166 R----RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 166 ~----~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
. ......+++.|+|||.+.+...++.++|+||||+++++|++|.+||...+.......+....+......+.....
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 112346788899999887656689999999999999999999999999888888888887766544332222111
Q ss_pred ccc---hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 242 LPD---YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
... ...........+....+..+..+.+++.+||+.||.+|||+.+++.|||++++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence 100 00111111222333345578999999999999999999999999999999988654
No 188
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2e-43 Score=301.42 Aligned_cols=261 Identities=29% Similarity=0.484 Sum_probs=211.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|+..+.||.|++|.||++.++.+++.+++|.+...... .....+.+|++.++.++||||+++.+.+..++..++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 4788999999999999999999999999999998765433 334456789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
+++| +|.+++......+++..+..++.|++.|+++||+ .|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-- 157 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK-- 157 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--
Confidence 9994 8888887665679999999999999999999999 99999999999999999999999999998655322211
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC-cHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS-DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...++..|+|||.+.+ ..++.++|+||||+++++|++|..||.... .........+..........+.
T Consensus 158 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 226 (265)
T cd06605 158 TFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS---------- 226 (265)
T ss_pred cccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCCh----------
Confidence 2567778999999877 578899999999999999999999986542 1111111111111111111110
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..+++++.++|.+||..||++|||+.+++.||||+.+.
T Consensus 227 ------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~ 264 (265)
T cd06605 227 ------------GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264 (265)
T ss_pred ------------hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence 01588999999999999999999999999999998763
No 189
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.1e-42 Score=295.48 Aligned_cols=254 Identities=28% Similarity=0.494 Sum_probs=212.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||.|++|.||++.++.+|..+++|.+............+.+|+++++.++|+|++++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 58899999999999999999999999999999977544333444667899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-cEEEeeccceeeeCCCCCccc
Q 021299 93 MET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 93 ~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~ 169 (314)
+.+ +|.+.+.... ..+++..+..++.|++.|+.+||+++++|+||+|+||+++.++ .++|+|||.+...........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 975 8888776543 3579999999999999999999999999999999999998886 579999999987654443334
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|+|||.+.+ ..++.++|+||||+++++|++|..||.................
T Consensus 161 ~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------- 219 (257)
T cd08225 161 TCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-------------------- 219 (257)
T ss_pred ccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC--------------------
Confidence 4567888999998866 5688999999999999999999999987665554444332110
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....+.++.++.++|.+||..+|++|||+.+++.||||
T Consensus 220 -------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 220 -------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 11123458899999999999999999999999999997
No 190
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=291.96 Aligned_cols=256 Identities=27% Similarity=0.472 Sum_probs=212.8
Q ss_pred HHhhccce-eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc----C
Q 021299 10 VADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH----K 83 (314)
Q Consensus 10 ~~~~y~~~-~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~----~ 83 (314)
|.++|.+- ++||-|-.|.|-.+.++.+++++|+|++.-.. +..+|++..... .|||||.++++|++ .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 56778654 67899999999999999999999999986432 444777766555 59999999999854 3
Q ss_pred CeEEEEEecccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC---CcEEEeeccce
Q 021299 84 GNLHLVFEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH---GQLKLADFGLA 158 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~---~~~~l~df~~~ 158 (314)
....+|||.++| .|.+.++.++ +.+++..+.+|+.||..|+.|||+.+|+||||||+|+|+... ..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 456789999986 8999998764 579999999999999999999999999999999999999654 47999999999
Q ss_pred eeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC----cHHHHHHHHHhhCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS----DIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~ 234 (314)
+.-.... .......||+|.|||++-. ..+....|+|||||++|-|++|.+||=.+. ......++..+...++.+
T Consensus 212 K~t~~~~-~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 212 KETQEPG-DLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred cccCCCc-cccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 8764433 3345667899999999866 679999999999999999999999994433 455666666665555555
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.|. .+|+.++++|+++|..+|++|.|+++++.|||+++..
T Consensus 290 EWs------------------------~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 290 EWS------------------------CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred hHh------------------------HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 554 4699999999999999999999999999999999765
No 191
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-42 Score=303.09 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=216.1
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
....++|.+.+.||+|++|+||++.+..+|+.+++|.+....... .....+.+|+.+++.++|||++++.+++...+..
T Consensus 11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~ 90 (307)
T cd06607 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA 90 (307)
T ss_pred CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence 344578999999999999999999998899999999986543222 2223566899999999999999999999999999
Q ss_pred EEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|+||+.|++.+.+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 91 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 91 WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred EEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 999999999998888766667999999999999999999999999999999999999999999999999998765332
Q ss_pred cccccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....+++.|+|||.+.+ ...++.++|+||||+++|+|++|..||...+.......+.... +...+
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~~------- 235 (307)
T cd06607 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLS------- 235 (307)
T ss_pred --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC----CCCCC-------
Confidence 23456778999998742 3457889999999999999999999998776655544432210 00000
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
....+..+.++|.+||..+|++||++.+++.||||..-.
T Consensus 236 ---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 236 ---------------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred ---------------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 012477899999999999999999999999999998654
No 192
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-42 Score=303.49 Aligned_cols=279 Identities=26% Similarity=0.406 Sum_probs=210.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++.+..++..+++|.+..... ......+.+|++++++++||||+++++.+..++..++++|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 479999999999999999999999999999999865432 2223356689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|++| +|.+++... +.+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~ 156 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MAN 156 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--ccc
Confidence 9986 777777654 568999999999999999999997 59999999999999999999999999988654222 223
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCC------------
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP------------ 237 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------ 237 (314)
...+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...+..... ...............
T Consensus 157 ~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 157 SFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCcc
Confidence 4567888999999866 56789999999999999999999999766533322 222111111100000
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
................++.. -...++.++.+++.+||..+|++||++++++.||||...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred chhhHHHHHHHHhcCCCccC-cCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000000000100 011368899999999999999999999999999999875
No 193
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-42 Score=294.93 Aligned_cols=251 Identities=29% Similarity=0.461 Sum_probs=210.2
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||.|++|.||++.+..++..+++|.+....... ....+.+|+.+++.++|+|++++.+.+..++..++++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS-AVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH-HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 5889999999999999999999999999999987543322 234566899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 MET-DLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+++ ++.+.+.. ....+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 985 78887765 3456899999999999999999999999999999999999999999999999999876544433444
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 160 ~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------------- 219 (255)
T cd08219 160 YVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP------------------- 219 (255)
T ss_pred ccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC-------------------
Confidence 567888999999876 568999999999999999999999998776655554443321111
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 292 (314)
....++..+.++|.+||+.||++||++.++++.-
T Consensus 220 --------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 220 --------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred --------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 1123578899999999999999999999998753
No 194
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.7e-43 Score=301.98 Aligned_cols=258 Identities=27% Similarity=0.428 Sum_probs=211.6
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+.+.|...+.||+|++|.||++.+..++..+++|.+....... ....+.+|+.+++.++|+||+++++.+..+...++|
T Consensus 2 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 2 PEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred hHHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence 4578999999999999999999998889999999987543322 234567899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
+||++| ++.+.+.. +.+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 81 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 81 MEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred EEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 999986 67666643 358999999999999999999999999999999999999999999999999997654333233
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....++..|+|||.+.+ ..++.++|+||||+++++|++|..||...........+... .+
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----~~--------------- 218 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN----SP--------------- 218 (277)
T ss_pred hcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC----CC---------------
Confidence 33457788999999876 56789999999999999999999998765544333221111 00
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
......++.++.++|.+||+.+|++||++.+++.||||..+.
T Consensus 219 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 219 --------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 011123578899999999999999999999999999998654
No 195
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.6e-43 Score=297.24 Aligned_cols=254 Identities=26% Similarity=0.407 Sum_probs=209.8
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+|.+.+.||.|++|.||++.+..+++.+++|.+....... .....+.+|++++++++||||+++++.+.++...++++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5899999999999999999999899999999998654322 334567789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|+.| +|...+... ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+....... ....
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~ 158 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTS 158 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccc
Confidence 9986 677666554 579999999999999999999999999999999999999999999999999997654332 2234
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.. ..++.++|+||||+++|+|++|..||...... ....+...... ..
T Consensus 159 ~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~----------------- 218 (258)
T cd05578 159 TSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET-AD----------------- 218 (258)
T ss_pred cCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc-cc-----------------
Confidence 557778999999876 55899999999999999999999999876642 11111111111 00
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH--HHHhcCccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA--QQALEHRFA 294 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~--~ell~h~~~ 294 (314)
......++..+.++|.+||+.||.+||+. .|+++||||
T Consensus 219 ------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 219 ------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 11122457899999999999999999999 999999998
No 196
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.8e-43 Score=302.59 Aligned_cols=262 Identities=24% Similarity=0.420 Sum_probs=214.4
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
....+.|.....||+|++|.||++.+..++..+++|.+..... .....+.+|+..++.++|+|++++++.+...+..+
T Consensus 18 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 18 GDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELW 95 (292)
T ss_pred CchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEE
Confidence 3456778888899999999999999988999999999865332 22335668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|||++| ++.+.+.. +.+++..+..++.||+.|+.+||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 96 lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 96 VVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred EEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 99999987 56565543 3489999999999999999999999999999999999999999999999999875533333
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
......++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||...........+....... .+
T Consensus 174 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~----~~--------- 239 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR----VK--------- 239 (292)
T ss_pred cCceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc----cc---------
Confidence 3334567888999998866 567899999999999999999999998776655544433221111 10
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
....++..+.+++.+||..||.+|||++++++||||.....
T Consensus 240 ------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~ 280 (292)
T cd06658 240 ------------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP 280 (292)
T ss_pred ------------cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence 01235889999999999999999999999999999997654
No 197
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2e-42 Score=295.03 Aligned_cols=257 Identities=29% Similarity=0.498 Sum_probs=214.7
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|.+.+.||+|++|.||++.+..+++.+++|.+...... .....+.+|+..+..++|+|++++.+++...+..++++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 4689999999999999999999999999999998765433 334567789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|++| +|.+.+... ..+++..++.++.|++.|+.+||+ .+++|+||+|+||+++.++.++|+|||.+...........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 9995 777777654 568999999999999999999999 9999999999999999999999999999987654444333
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc---HHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|..||..... ......+. ......
T Consensus 159 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~----------- 222 (264)
T cd06623 159 TFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DGPPPS----------- 222 (264)
T ss_pred ceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cCCCCC-----------
Confidence 4567788999999876 5788999999999999999999999977752 22222221 111111
Q ss_pred hhccccCCCCCccCCC-CCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 247 EYQYVAAPPLRSLFPS-ASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.... ++..+.++|.+||..+|++||++.++++|||++..+
T Consensus 223 ------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 223 ------------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred ------------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 1122 588999999999999999999999999999998764
No 198
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.3e-42 Score=306.97 Aligned_cols=252 Identities=25% Similarity=0.398 Sum_probs=196.6
Q ss_pred HhhccceeeeCccccceEEEEEEC-----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc-C
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K 83 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~ 83 (314)
.++|++.+.||+|+||.||+|.+. .++..||+|.+..... ......+.+|+.+++.+ +||||+++++++.. +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 479999999999999999999742 3456899999864322 22234577899999999 89999999998765 4
Q ss_pred CeEEEEEecccc-cHHHHHHhCC---------------------------------------------------------
Q 021299 84 GNLHLVFEFMET-DLETVIRNTN--------------------------------------------------------- 105 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~--------------------------------------------------------- 105 (314)
+..+++|||++| +|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 468999999985 8887776421
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC--CcccccccCccccC
Q 021299 106 ----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRA 179 (314)
Q Consensus 106 ----~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~s 179 (314)
..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++....... .......+++.|+|
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 237788889999999999999999999999999999999999999999999997643221 11222345677999
Q ss_pred cccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCc
Q 021299 180 PELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRS 258 (314)
Q Consensus 180 PE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (314)
||.+.+ ..++.++||||||+++|+|++ |..||............... .... .
T Consensus 245 PE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~---~~~~-----------------------~ 297 (338)
T cd05102 245 PESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD---GTRM-----------------------R 297 (338)
T ss_pred cHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc---CCCC-----------------------C
Confidence 999876 668999999999999999997 99999876543333222211 0000 0
Q ss_pred cCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 259 LFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 259 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+++.+.+|+.+||+.||.+|||+.|+++
T Consensus 298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 298 APENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11245889999999999999999999999875
No 199
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.2e-42 Score=295.55 Aligned_cols=258 Identities=29% Similarity=0.503 Sum_probs=207.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC----cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
+|+..+.||+|++|.||.+.+..+++.+++|.+........ ....+.+|++.+++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 48889999999999999999999999999999875442221 23456689999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-cEEEeeccceeeeCCCCC
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR 166 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~~~~ 166 (314)
++||+.| +|.+.+... +++++..+..++.|++.||.+||++|++|+||+|+||+++.++ .++|+|||.+........
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 9999996 677766543 4689999999999999999999999999999999999998776 699999999976643311
Q ss_pred c----ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 167 R----FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 167 ~----~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
. .....++..|+|||.+.+ ..++.++|+||||+++++|++|..||...........+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------- 229 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA--------- 229 (268)
T ss_pred cCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC---------
Confidence 1 122356778999999876 56789999999999999999999999765443333322221111111
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
......+++++.+++.+||+.+|++||++.+++.||||+
T Consensus 230 --------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 230 --------------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred --------------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 111234688999999999999999999999999999985
No 200
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.7e-42 Score=298.74 Aligned_cols=258 Identities=29% Similarity=0.415 Sum_probs=208.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccC-----
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHK----- 83 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~----- 83 (314)
..++|.+.+.||+|++|.||++.+..+++.+++|.+..... ....+.+|+.+++.+ +|||++++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 46899999999999999999999999999999999865321 223455788899988 799999999987543
Q ss_pred CeEEEEEecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 84 GNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
+..++++||++| +|.+.+.. ....+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999986 77776643 34568999999999999999999999999999999999999999999999999987
Q ss_pred eeCCCCCcccccccCccccCcccccCcc----CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCC
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~~----~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
.............++..|+|||.+.... .++.++|+||||+++|+|++|.+||...........+... .+..
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~----~~~~ 252 (291)
T cd06639 177 QLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN----PPPT 252 (291)
T ss_pred hcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC----CCCC
Confidence 6544333334456788899999885432 3689999999999999999999999877665554443221 1100
Q ss_pred CCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
+ ......+..+.++|.+||+.+|++||++.+++.||||+
T Consensus 253 ~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 L---------------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred C---------------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 00123477899999999999999999999999999995
No 201
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.2e-42 Score=297.88 Aligned_cols=256 Identities=29% Similarity=0.394 Sum_probs=206.2
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceec------c
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP------H 82 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~------~ 82 (314)
-.+.|++.+.||.|++|.||++.+..+++.+++|.+..... ....+..|+.+++++ +|+|++++++++. .
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED---EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH---HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 35899999999999999999999999999999999865432 223556788888888 6999999999874 3
Q ss_pred CCeEEEEEecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 83 KGNLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
....+++|||+++ +|.+.+... ...+++..+..++.||+.|+.|||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 4678999999986 777777653 34588899999999999999999999999999999999999999999999999875
Q ss_pred eCCCCCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
............+++.|+|||.+.. ...++.++|+||||+++|+|++|..||....+......+... .+.
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~----~~~-- 244 (282)
T cd06636 171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----PPP-- 244 (282)
T ss_pred hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC----CCC--
Confidence 5433333344567888999998753 245788999999999999999999999765544333322111 000
Q ss_pred CCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......++.++.+||.+||+.||.+||++.|+++||||
T Consensus 245 --------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 245 --------------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --------------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 00112458899999999999999999999999999997
No 202
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.1e-42 Score=297.17 Aligned_cols=257 Identities=25% Similarity=0.455 Sum_probs=210.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC---CCCeeeeeceeccCCeEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~iv 89 (314)
.|++.+.||+|++|.||++.+..++..+++|.+...... .....+.+|+.+++.+. |||++++++++..+...+++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 588899999999999999999999999999998754322 22335667888888886 99999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||+.| +|.+++... .+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999986 677666543 68999999999999999999999999999999999999999999999999998775544334
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....++..|+|||.+.+...++.++|+||||+++|+|++|..||...........+.. ..+..++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~----~~~~~~~----------- 223 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK----SKPPRLE----------- 223 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc----CCCCCCC-----------
Confidence 4456788899999987656678999999999999999999999976654333221110 0111110
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
...++.++.+++.+||+.||++||++.+++.||||+...
T Consensus 224 -----------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 224 -----------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -----------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 012578999999999999999999999999999998765
No 203
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.8e-42 Score=296.96 Aligned_cols=261 Identities=27% Similarity=0.455 Sum_probs=214.8
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
.-..+|...+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+|++++++++...+..++
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 16 DPRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWV 93 (285)
T ss_pred cchHhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEE
Confidence 334577778999999999999999988999999998864322 223356789999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
++||+.| +|.+.+.. +.+++..+..++.|++.|+++||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 94 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 94 VMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred EEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 9999976 77777766 45899999999999999999999999999999999999999999999999988655433333
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.....+++.|+|||.+.+ ..++.++|+||+|+++++|++|..||...+.......+..... ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~----~~~----------- 235 (285)
T cd06648 172 RKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP----PKL----------- 235 (285)
T ss_pred cccccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC----CCC-----------
Confidence 334567888999999866 5678999999999999999999999987766655554433211 000
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.....+++.+.+++.+||+.+|++||++.++++||||++..+
T Consensus 236 ----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 236 ----------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred ----------cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 001235889999999999999999999999999999987654
No 204
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.1e-42 Score=297.34 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=212.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
...|+..+.||.|++|.||.+.+..++..+++|.+...... .....+.+|+.+++++.|+||+++++.+.++...++||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788999999999999999999989999999998754322 22345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| +|.+.+.. +.+++..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||.+...........
T Consensus 82 e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 82 EYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred ecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99986 77776654 3588999999999999999999999999999999999999999999999999976644333333
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|..||....+......+... .+
T Consensus 160 ~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~----~~---------------- 218 (277)
T cd06640 160 TFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN----NP---------------- 218 (277)
T ss_pred cccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC----CC----------------
Confidence 4457778999999876 56799999999999999999999999776554433322111 01
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
......++..+.+++.+||+.+|++||++++++.||||.....
T Consensus 219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 219 -------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred -------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 1112235788999999999999999999999999999986643
No 205
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.6e-42 Score=292.30 Aligned_cols=257 Identities=28% Similarity=0.482 Sum_probs=209.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||+|++|.||++.+..++..+++|.+............+..|+++++.++|+||+++++.....+..++++||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 68999999999999999999988999999999987655433445677899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc--
Q 021299 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT-- 169 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-- 169 (314)
+.+ +|.+.+... ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 986 677666543 4588999999999999999999999999999999999999999999999999987644332221
Q ss_pred --ccccCccccCcccccCcc--CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 170 --HQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 170 --~~~~~~~y~sPE~~~~~~--~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
...+++.|+|||.+.+.. ..+.++|+||+|++++++++|..||...+........... ......+.
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~------- 229 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIPD------- 229 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCCc-------
Confidence 245677899999987632 2789999999999999999999999765433322211111 11111111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
...+++.+.++|.+||+.+|.+||++++++.|||+
T Consensus 230 --------------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 230 --------------SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------------ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 12358889999999999999999999999999996
No 206
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=311.09 Aligned_cols=253 Identities=30% Similarity=0.452 Sum_probs=218.3
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccccc
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETD 96 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g~ 96 (314)
.++||+|.||+||-++++.+|+.||+|++.+............+|+.+|+.+.||+|+.+-..|+..+.+++|||.+.|+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57899999999999999999999999999988766555567779999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC---cEEEeeccceeeeCCCCCcccccc
Q 021299 97 LETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 97 l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
.++++... .+.+++..-..++.||+.||.|||.+||+|+||||+||++.... .+||||||++++.++... ....+
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-RrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-RRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-hhhhc
Confidence 99998754 67899999999999999999999999999999999999997653 699999999999876543 45678
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVA 252 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (314)
|||.|+|||++.. +.|+...|+||.|||+|--+.|..||...++.. .++....--.++..|
T Consensus 728 GTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNAaFMyPp~PW---------------- 788 (888)
T KOG4236|consen 728 GTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNAAFMYPPNPW---------------- 788 (888)
T ss_pred CCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCccchh--HHhhccccccCCCch----------------
Confidence 9999999999987 778999999999999999999999996544322 222111111223333
Q ss_pred CCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 253 APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 253 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
..+++++++||..+|+...++|.|.+..|.|||++..
T Consensus 789 --------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 789 --------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred --------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 3569999999999999999999999999999999976
No 207
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.5e-42 Score=293.28 Aligned_cols=254 Identities=29% Similarity=0.464 Sum_probs=205.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC----cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG----VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
+|++.+.||.|++|+||++.. .+|..+++|.+........ ....+.+|++++++++|+||+++.+++.+++..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 589999999999999999975 4788999999876533221 12346689999999999999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC---
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP--- 164 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~--- 164 (314)
++||+.| +|.+.+.+. ..+++..+..++.|++.|+++||+.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 80 FMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999986 777776544 45889999999999999999999999999999999999999999999999998754221
Q ss_pred ---CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 165 ---DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 165 ---~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
........++..|+|||.+.+ ..++.++|+||||+++++|++|..||...+.......+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------- 226 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL----------- 226 (265)
T ss_pred ccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----------
Confidence 111223457888999999876 56789999999999999999999999776544433322211000
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.......++.++.++|.+||+.+|++||++.+++.||||
T Consensus 227 --------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 --------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111223468999999999999999999999999999997
No 208
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.4e-42 Score=296.57 Aligned_cols=258 Identities=27% Similarity=0.409 Sum_probs=205.6
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeecee-----cc
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAF-----PH 82 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~-----~~ 82 (314)
...++|.+.+.||+|++|.||++.+..+++.+++|.+..... ....+..|+.+++.+ +|+||+++++++ ..
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 356899999999999999999999999999999998764321 123456788999998 699999999987 34
Q ss_pred CCeEEEEEecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 83 KGNLHLVFEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
++..+++|||++| +|.+.+.. ....+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||.+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 5678999999986 77776642 3456899999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
..............+++.|+|||.+.. ...++.++|+||||+++|+|++|..||............... .+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~----~~~ 247 (286)
T cd06638 172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN----PPP 247 (286)
T ss_pred eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc----CCC
Confidence 876443333344568889999998853 234688999999999999999999999766543333221110 000
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.. ......+..+.++|.+||+.||++|||+.|+++|+||
T Consensus 248 ~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 TL---------------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred cc---------------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00 0011247789999999999999999999999999997
No 209
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-44 Score=316.54 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=222.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+-|.|+..||.|+||.||++..+.++-..|.|++..... .....++-|+.+|..++||+|+++++.|-.++..+++.
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse--EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE--EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch--hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 4678999999999999999999888888889998875543 33346778999999999999999999888889999999
Q ss_pred ecccccHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMETDLETVI-RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g~l~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|||+|+-.+.+ ...+..+.+.++..++.|++.||.|||+++|+|+|||..||++..+|.++|.|||.+...........
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD 188 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD 188 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence 99998655554 56677899999999999999999999999999999999999999999999999999987655555566
Q ss_pred ccccCccccCccccc----CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 170 HQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~----~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..+|||+|||||+.. .+.+|..++||||||+.|.+|.-+.+|....++-..+-.+..- .+|..+.
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTLlq-------- 257 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLLQ-------- 257 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCcccC--------
Confidence 789999999999874 3578999999999999999999999999888877766665443 2222111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
+...+..+.+++.+||.+||+.||+++++++|||+++.+
T Consensus 258 --------------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 258 --------------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred --------------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 123488999999999999999999999999999999775
No 210
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.4e-42 Score=291.31 Aligned_cols=254 Identities=28% Similarity=0.480 Sum_probs=209.3
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc---cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+|+..+.||+|++|.||++....++..+++|.+...... ......+.+|+.+++.++|+|++++.+++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 588899999999999999999888999999998764422 22334567899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
+||++| +|.+++... +.+++..+..++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~ 158 (258)
T cd06632 81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FA 158 (258)
T ss_pred EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-cc
Confidence 999986 777777654 458999999999999999999999999999999999999999999999999987654332 22
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....++..|++||.+.....++.++|+||||+++|+|++|..||............... ..
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~---------------- 219 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS---KE---------------- 219 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc---cc----------------
Confidence 34557888999999866344889999999999999999999999776644433332211 00
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.......+++.+.+++.+||+.+|++||++++++.|||+
T Consensus 220 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 -------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 011123468899999999999999999999999999996
No 211
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.5e-42 Score=299.25 Aligned_cols=262 Identities=30% Similarity=0.498 Sum_probs=215.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|||++++.+++...+..++|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5899999999999999999999888899999999864322 22345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+.| ++.+++.+. .+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 96 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 96 EYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred ecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 99985 777777654 378899999999999999999999999999999999999999999999999876644443334
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...+++.|++||.+.. ..++.++|+||||+++|++++|..||...+.......+... + .+ .
T Consensus 174 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-~--~~-~-------------- 234 (293)
T cd06647 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G--TP-E-------------- 234 (293)
T ss_pred cccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-C--CC-C--------------
Confidence 4567888999999876 56789999999999999999999999876554333222110 0 00 0
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
......++..+.++|.+||..+|++||++.+++.||||+..+.+..
T Consensus 235 -------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~ 280 (293)
T cd06647 235 -------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSS 280 (293)
T ss_pred -------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccccc
Confidence 0111235788999999999999999999999999999998775543
No 212
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.9e-42 Score=299.57 Aligned_cols=265 Identities=26% Similarity=0.403 Sum_probs=219.7
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
+...+.|...+.||+|++|+||++.+..+|..+++|.+....... .....+.+|+++++.++|+|++++.+++.+....
T Consensus 17 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 96 (313)
T cd06633 17 DDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA 96 (313)
T ss_pred CCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence 344677888899999999999999999999999999997654322 2223566899999999999999999999999999
Q ss_pred EEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
+++|||+.|++.+.+......+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 97 ~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 97 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 99999999999998887777799999999999999999999999999999999999999999999999998864322
Q ss_pred cccccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....++..|+|||.+.. ...++.++|+||||+++|+|++|..||...+.......+........
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 240 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL------------ 240 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------------
Confidence 123457788999999842 24578899999999999999999999987776666555433211100
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
....++..+.+|+.+||+.+|.+||++.+++.||||+......+
T Consensus 241 --------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~ 284 (313)
T cd06633 241 --------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARV 284 (313)
T ss_pred --------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHH
Confidence 01234778999999999999999999999999999998765444
No 213
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.7e-42 Score=292.08 Aligned_cols=255 Identities=26% Similarity=0.481 Sum_probs=204.3
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc---chhhHHHHHHHhhcCCCCeeeeeceecc--CCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV---NFTALREIKLLKELKSPHIIELIDAFPH--KGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 86 (314)
..|.+.+.||+|++|.||++.+..++..+++|.+......... ...+.+|+.+++.++||||+++.+++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999999999999999998765432221 2345679999999999999999998754 4678
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC-
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP- 164 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~- 164 (314)
++++|+++| +|.+.+.... .+++...+.++.|++.||++||+.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 899999986 7777776543 5889999999999999999999999999999999999999999999999998754321
Q ss_pred --CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 165 --DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 165 --~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
........++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||...........+... ....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~~~-------- 228 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PTNP-------- 228 (266)
T ss_pred ccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CCCC--------
Confidence 111223456788999999876 66789999999999999999999999876554444332211 1111
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
.....+++.+.+++ +||..+|++||+++|+++||||+
T Consensus 229 ---------------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 229 ---------------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ---------------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 11124578899999 67778999999999999999997
No 214
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.6e-42 Score=297.20 Aligned_cols=263 Identities=31% Similarity=0.477 Sum_probs=219.4
Q ss_pred cHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 7 SKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.+...+.|++...||+|++|.||++.+..++..+++|.+..... ....+.+|++.++.++|+|++++++.+..+...
T Consensus 14 ~~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 14 EGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDEL 90 (286)
T ss_pred CCCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEE
Confidence 44567889999999999999999999988899999999976544 334566899999999999999999999999999
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++||++ ++|.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 99999999 58888887765579999999999999999999999999999999999999999999999999887654433
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+..... ....
T Consensus 171 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~-------- 237 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI----PPLK-------- 237 (286)
T ss_pred hhhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC----CCCc--------
Confidence 33334456778999998876 5678999999999999999999999987766655444332110 0000
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
....++.++.++|.+||+.+|.+||++.++++||||+...
T Consensus 238 -------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 238 -------------NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred -------------chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 0123578899999999999999999999999999999843
No 215
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.2e-42 Score=298.02 Aligned_cols=260 Identities=28% Similarity=0.404 Sum_probs=210.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||+|++|.||++.+..+++.|++|.+....... .....+.+|+++++.++||||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47899999999999999999999999999999987654321 22235568999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC----
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD---- 165 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~---- 165 (314)
||++| +|.+.+... +.+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99986 777777654 468999999999999999999999999999999999999999999999999886321000
Q ss_pred -----------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 166 -----------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 166 -----------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
.......++..|+|||.+.. ..++.++|+||||+++|+|++|..||.+....+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 237 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE- 237 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-
Confidence 00112345677999999876 56799999999999999999999999877665555544332111000
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcCccccccC
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRFAKSFN 298 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h~~~~~~~ 298 (314)
....+++++.++|.+||..||++||+ +.++++||||...+
T Consensus 238 ------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 238 ------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred ------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 01235889999999999999999998 79999999997764
No 216
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.9e-42 Score=297.20 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=209.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|...+.||+|++|.||++.+..++..+++|.+...... .....+.+|+.++.++. |+||+++++++...+..+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 5677889999999999999999999999999998755433 23345668999999996 999999999998888999999
Q ss_pred ecccccHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 91 EFMETDLETVIR----NTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 91 e~~~g~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
|++++++.+... .....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 999976655432 2345699999999999999999999975 99999999999999999999999999986543221
Q ss_pred CcccccccCccccCcccccCc--cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 166 RRFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~--~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
......+++.|+|||.+.+. ..++.++|+||||+++|+|++|..||.... .....+........+. .+
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~-~~------ 232 (288)
T cd06616 163 -AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPI-LS------ 232 (288)
T ss_pred -ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCc-CC------
Confidence 22233577889999998764 368899999999999999999999997654 1222222211111111 00
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
......+++++.+||.+||+.||++|||+++++.||||+....+-
T Consensus 233 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~ 277 (288)
T cd06616 233 -------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERN 277 (288)
T ss_pred -------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcc
Confidence 011124688999999999999999999999999999998865443
No 217
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-41 Score=288.10 Aligned_cols=253 Identities=32% Similarity=0.523 Sum_probs=214.0
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||+|++|.||++.+..+++.+++|.+............+.+|++++++++|+|++++++++.+.+..++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58899999999999999999998999999999987755434445677999999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
++| +|.+.+... ..+++..++.++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+.............
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 986 777766654 569999999999999999999999999999999999999999999999999998775544433445
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.++..|+|||.+.+ ..++.++|+||||+++++|++|..||............... .
T Consensus 160 ~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~-------------------- 215 (254)
T cd06627 160 VGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD---D-------------------- 215 (254)
T ss_pred ccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc---C--------------------
Confidence 67888999999876 44789999999999999999999999766544444333211 0
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.......+++.+.+++.+||..+|++||++++++.||||
T Consensus 216 ----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 216 ----HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ----CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 011123568899999999999999999999999999997
No 218
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1e-41 Score=293.05 Aligned_cols=257 Identities=27% Similarity=0.436 Sum_probs=211.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+-|++.+.||+|++|.||++.+..++..+++|.+...... .....+.+|+.+++.++||||+++++++..+...++||
T Consensus 3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 45688999999999999999999889999999988654322 22345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||++| ++..++.. ..+++..+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+...........
T Consensus 82 e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06641 82 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence 99986 67766653 3589999999999999999999999999999999999999999999999999876544332333
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...++..|+|||.+.+ ..++.++|+||||+++++|++|..||...........+... .+.
T Consensus 160 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~--------------- 219 (277)
T cd06641 160 TFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN----NPP--------------- 219 (277)
T ss_pred cccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC----CCC---------------
Confidence 4467788999998876 56788999999999999999999999776654444433211 111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.....++.++.+++.+||+.+|++||++.+++.||||....
T Consensus 220 --------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 220 --------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred --------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 11224588999999999999999999999999999998653
No 219
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1e-41 Score=292.09 Aligned_cols=259 Identities=28% Similarity=0.481 Sum_probs=207.0
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc--------chhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV--------NFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
+|.+.+.||+|++|.||++.+..+|+.+++|.+......... ...+..|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 588999999999999999999889999999998653221111 124557999999999999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
..++|+||+.| +|.+.+... +.+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 99999999985 777777655 4689999999999999999999999999999999999999999999999999976532
Q ss_pred CCC--cccccccCccccCcccccCcc-CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 164 PDR--RFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 164 ~~~--~~~~~~~~~~y~sPE~~~~~~-~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
... ......++..|+|||.+.... .++.++|+||||++++++++|..||...+........... ......+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~--- 234 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK---RSAPPIP--- 234 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc---ccCCcCC---
Confidence 211 122335677899999987643 4789999999999999999999999765544433332111 1111110
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....+.++.++.++|.+||..+|++||+++++++|||+
T Consensus 235 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 235 ----------------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ----------------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 11223568999999999999999999999999999996
No 220
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.6e-42 Score=290.76 Aligned_cols=250 Identities=25% Similarity=0.442 Sum_probs=206.0
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||.|++|.||++.+..+++.+++|.+...... ......+.+|+.+++.++||||+++++.+.+++..++++||++| +|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999999999999999765432 22334677899999999999999999999999999999999985 78
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccc
Q 021299 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (314)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y 177 (314)
.+.+... ..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+....... ......+++.|
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~ 158 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEY 158 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCc
Confidence 7777654 358999999999999999999999999999999999999999999999999998764432 22334577889
Q ss_pred cCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC--cHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCC
Q 021299 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPP 255 (314)
Q Consensus 178 ~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
++||.+.+ ..++.++|+||+|+++|+|++|..||.... .......+..... ..
T Consensus 159 ~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~--------------------- 213 (262)
T cd05572 159 VAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG---KL--------------------- 213 (262)
T ss_pred cChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC---CC---------------------
Confidence 99998866 567899999999999999999999997766 3333333321100 00
Q ss_pred CCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 256 LRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 256 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
......++++.++|.+||+.+|++||+ ++|+++||||++++
T Consensus 214 --~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 259 (262)
T cd05572 214 --EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD 259 (262)
T ss_pred --CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCC
Confidence 111234789999999999999999999 99999999999764
No 221
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-45 Score=297.08 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=227.4
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
=.+-|.+++.||+|++|.||++.++.+|..+++|....... ..++.+|+.++++++.+++|++++.|-.+...|||
T Consensus 31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD----LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD----LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch----HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence 34678999999999999999999999999999999876543 33667999999999999999999998888899999
Q ss_pred Eeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||||+ |+..+.++.+++.+++..+..+++.-+.||.|||...=+|+|||..||+++.+|..||.|||.+-....-....
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 99999 79999999999999999999999999999999999999999999999999999999999999997776656666
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...+|||.|+|||++.. -.|+.++||||||+...+|..|++|+....+-..+.. +.+.+|..+..
T Consensus 187 NTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM----IPT~PPPTF~K---------- 251 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM----IPTKPPPTFKK---------- 251 (502)
T ss_pred CccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccccceeEe----ccCCCCCCCCC----------
Confidence 77899999999999976 6689999999999999999999999987765544332 23333333221
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcce
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVF 301 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 301 (314)
....++++.++|++||-+.|++|.|+.++++|||+++-.+..
T Consensus 252 -----------PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~ 293 (502)
T KOG0574|consen 252 -----------PEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCD 293 (502)
T ss_pred -----------hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCccc
Confidence 112488999999999999999999999999999999876543
No 222
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.6e-42 Score=293.84 Aligned_cols=253 Identities=29% Similarity=0.417 Sum_probs=204.9
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||+|++|+||++.+..+|+.+++|.+........ ....+..|+++++.++|||++++.+.+...+..++||||++| +|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6899999999999999999999999976543222 223456799999999999999999999999999999999985 78
Q ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCcc
Q 021299 98 ETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARW 176 (314)
Q Consensus 98 ~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~ 176 (314)
.+.+.... ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+..... ........++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccccCCCC
Confidence 77776543 3689999999999999999999999999999999999999999999999998875532 222233456778
Q ss_pred ccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCC
Q 021299 177 YRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPL 256 (314)
Q Consensus 177 y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (314)
|+|||.+.+ ..++.++|+||||+++++|++|..||...........+........
T Consensus 160 y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------ 214 (277)
T cd05577 160 YMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA------------------------ 214 (277)
T ss_pred cCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccc------------------------
Confidence 999999876 4588999999999999999999999977654322222222111100
Q ss_pred CccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 257 RSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 257 ~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
....+..++.+.++|.+||+.||++|| ++.+++.||||..++
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 215 VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 011234588999999999999999999 899999999998775
No 223
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-42 Score=318.69 Aligned_cols=294 Identities=20% Similarity=0.270 Sum_probs=207.4
Q ss_pred ccccHHHHhhccceeeeCccccceEEEEEECCCCc-EEEEEEee--------------cC-CcccCcchhhHHHHHHHhh
Q 021299 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQ-TVAIKKIR--------------LG-KQKEGVNFTALREIKLLKE 67 (314)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~-~~~iK~~~--------------~~-~~~~~~~~~~~~e~~~l~~ 67 (314)
+.-.+.+.++|++++.||+|+||+||++..+.... ..+.|.+. .. .........+.+|+.++++
T Consensus 140 ~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~ 219 (501)
T PHA03210 140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR 219 (501)
T ss_pred cccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence 34456778999999999999999999987544322 22222110 00 0111122345689999999
Q ss_pred cCCCCeeeeeceeccCCeEEEEEecccccHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceE
Q 021299 68 LKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (314)
Q Consensus 68 l~~~~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil 143 (314)
++|+||+++++++...+..|++++++.+++..++.... .......+..++.||+.||.|||++||+|+||||+||+
T Consensus 220 l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 220 LNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred CCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 99999999999999999999999999999888875432 22446678889999999999999999999999999999
Q ss_pred EecCCcEEEeeccceeeeCCCCC-cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCC-ccCCC--CcHH
Q 021299 144 IGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP-FLQGS--SDID 219 (314)
Q Consensus 144 ~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~-pf~~~--~~~~ 219 (314)
++.++.++|+|||++........ ......|++.|+|||.+.+ ..++.++|||||||++|+|++|.. |+... .+..
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 99999999999999987644322 2234578999999999877 568999999999999999999874 44432 2333
Q ss_pred HHHHHHHhhCCCCCCCCCCcCc-ccchhhhccc--cCCCCCcc--CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 220 QLGKIFAAFGTATPSQWPDLAY-LPDYVEYQYV--AAPPLRSL--FPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
....+...... ....+++... .......... ....+... ...++..+.++|.+||+.||.+|||+.|+|.||||
T Consensus 379 ~~~~~~~~~~~-~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 379 QLLKIIDSLSV-CDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHHhccc-ChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 44444433322 1122222100 0000000000 00000000 12357788999999999999999999999999999
Q ss_pred cccCc
Q 021299 295 KSFNG 299 (314)
Q Consensus 295 ~~~~~ 299 (314)
+....
T Consensus 458 ~~~~~ 462 (501)
T PHA03210 458 SAEEE 462 (501)
T ss_pred hcCCc
Confidence 87653
No 224
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1e-41 Score=291.35 Aligned_cols=251 Identities=17% Similarity=0.221 Sum_probs=203.0
Q ss_pred HhhccceeeeCccccceEEEEEEC---CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|++.+.||+|+||.||++.++ ..+..+++|.+...... .....+.+|+..++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 468999999999999999999765 34568999998764322 22345678999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
+||||++| +|.+++......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++++|||.+........
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 99999986 67767766566799999999999999999999999999999999999999999999999998764322111
Q ss_pred -cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 -RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 -~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
......++..|+|||.+.+ ..++.++||||||+++|++++ |..||......+....+.......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 228 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP------------- 228 (266)
T ss_pred hcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC-------------
Confidence 1112234567999998876 678999999999999999875 999998877766655553321111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....++..+.+++.+||+.+|++||++++|++
T Consensus 229 --------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 229 --------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred --------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 11245889999999999999999999999875
No 225
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.7e-41 Score=291.95 Aligned_cols=252 Identities=27% Similarity=0.417 Sum_probs=196.8
Q ss_pred eeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc-hhhHHHHHHH---hhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALREIKLL---KELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-~~~~~e~~~l---~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
.||+|++|.||++.+..++..+++|.+.......... ....++..++ ....|++++.+.+++..++..++||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654332221 1223343333 33478999999999988899999999998
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
| +|...+... +.+++..+..++.|++.||.+||+++++|+||||+||+++.++.++|+|||++...... ......+
T Consensus 81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVG 157 (279)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--CccCcCC
Confidence 6 666666543 46999999999999999999999999999999999999999999999999998755332 2233467
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
++.|+|||.+..+..++.++|+||+|+++|+|++|..||......... .+....... .
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~-~-------------------- 215 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTV-N-------------------- 215 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhhcC-C--------------------
Confidence 889999998865466789999999999999999999999754322211 111110000 0
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
......+++++.++|.+||..||.+|| +++++++||||+.++
T Consensus 216 ---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 216 ---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred ---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 011234688999999999999999999 699999999999875
No 226
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-44 Score=284.16 Aligned_cols=288 Identities=41% Similarity=0.725 Sum_probs=242.6
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--------
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-------- 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 82 (314)
.+.|..+..||+|.||.||+|+.+.+|+.|++|+.......+.......+|+.++..+.|+|++.++..+..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 467888899999999999999999999999999877655555444566789999999999999999987732
Q ss_pred CCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 83 KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 83 ~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+|+||.+|..+|..++......++...+..++.+++.||.|+|.+.|.|+|+|+.|++++.+|.++|.|||+++.+.
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 23589999999999999999888889999999999999999999999999999999999999999999999999996553
Q ss_pred CC----CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 163 SP----DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 163 ~~----~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
.. ...+...+.|.+|.+||.+.+...++++-|+|.-||++.+|+++.+.+..+....++..+...-++..++.||.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 22 12233345589999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCcccchhhhcccc-----CCCCCccCC--CCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 239 LAYLPDYVEYQYVA-----APPLRSLFP--SASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 239 ~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
...++-........ ...+++... .-.+++.+|+.++|..||.+|+++.+++.|.||.+-.
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 77766554331111 111111111 1266899999999999999999999999999997653
No 227
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.8e-41 Score=288.92 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=203.4
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
.......||+|++|.||++.+..++..+++|.+...... ....+.+|+.+++.++|+||+++++++..++..++++||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR--YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH--HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 334556899999999999999888999999988654322 233566899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhCCCCC--CHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceeeeCCCCCcc
Q 021299 93 MET-DLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~ 168 (314)
+.| +|.+.+......+ ++..+..++.||+.|+++||++|++|+||+|+||+++. ++.++|+|||.+..........
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc
Confidence 985 8888887654445 88889999999999999999999999999999999976 6799999999997654333333
Q ss_pred cccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+++.|+|||.+.+. ..++.++|+||+|+++|+|++|..||.................
T Consensus 167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------ 228 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK------------------ 228 (268)
T ss_pred ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc------------------
Confidence 344578889999998653 3478899999999999999999999875443222111110000
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
........+++++.+++.+||+.+|.+|||+.|++.||||
T Consensus 229 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 -------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0011123468899999999999999999999999999997
No 228
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.8e-41 Score=285.78 Aligned_cols=255 Identities=29% Similarity=0.533 Sum_probs=211.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--CeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~iv~ 90 (314)
+|.+.+.||+|++|.||++.+..++..+++|.+............+.+|+..+++++|+||+++.+.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 58889999999999999999998999999999987665444455677899999999999999999999887 8899999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--c
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--R 167 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~ 167 (314)
|++++ +|.+++.... .+++..++.++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 99964 7877776654 799999999999999999999999999999999999999999999999999987755432 1
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.....++..|+|||.+.+ ...+.++|+||||+++++|++|..||........ .+........
T Consensus 160 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~--------------- 221 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGSSGE--------------- 221 (260)
T ss_pred ccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccccCC---------------
Confidence 344567788999998876 5589999999999999999999999987662221 1111100001
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.......+++.+.++|.+||+.+|++||++.+++.||||
T Consensus 222 --------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 222 --------PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --------CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 111223458899999999999999999999999999997
No 229
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-41 Score=289.98 Aligned_cols=252 Identities=29% Similarity=0.397 Sum_probs=200.4
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHH-HHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIK-LLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
++.||+|++|.||+|.+..+|+.+++|.+........ ....+..|.. .....+|+|++++++++..++..++++||++
T Consensus 1 ~~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (260)
T cd05611 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80 (260)
T ss_pred CccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence 3679999999999999988999999999875432211 1112233433 3445589999999999999999999999998
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
| +|.+++... +.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+..... .....+
T Consensus 81 ~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~ 155 (260)
T cd05611 81 GGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVG 155 (260)
T ss_pred CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCC
Confidence 6 777766544 4689999999999999999999999999999999999999999999999998875432 223456
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.........
T Consensus 156 ~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------- 214 (260)
T cd05611 156 TPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE-------------------- 214 (260)
T ss_pred CcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC--------------------
Confidence 778999999877 44789999999999999999999999887766655554332111100
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcCccccccC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRFAKSFN 298 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h~~~~~~~ 298 (314)
.....+++++.+++.+||+.+|++||+ ++|+++||||++++
T Consensus 215 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 215 ----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred ----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 111246899999999999999999995 57999999998754
No 230
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.6e-41 Score=288.10 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=199.1
Q ss_pred HHhhccceeee--CccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhh-cCCCCeeeeeceeccCCeE
Q 021299 10 VADRYLKREVL--GEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKE-LKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 10 ~~~~y~~~~~l--g~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~ 86 (314)
..+.|.+.+.+ |+|++|.||++.++.++..+++|.+........ |...... .+|+|++++++.+...+..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 45778887777 999999999999999999999999875432211 2222221 2799999999999999999
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-cEEEeeccceeeeCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSP 164 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~~ 164 (314)
++||||++| +|.+++.... .+++..+..++.|++.||.+||+.|++|+||+|+||+++.++ .++|+|||.+......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999975 8888887654 799999999999999999999999999999999999999998 9999999999765432
Q ss_pred CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHH-HHHHHHhhCCCCCCCCCCcCccc
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
....++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||........ ........ ....
T Consensus 164 ----~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~---------- 227 (267)
T PHA03390 164 ----SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKL---------- 227 (267)
T ss_pred ----ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccC----------
Confidence 22356788999999976 5678999999999999999999999975543321 12221111 1110
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-HHHHhcCccccc
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-AQQALEHRFAKS 296 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~ell~h~~~~~ 296 (314)
...+.+++.+.++|.+||+.+|.+||+ .+++|+||||+.
T Consensus 228 --------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 228 --------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred --------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 112346999999999999999999996 599999999973
No 231
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.9e-41 Score=291.67 Aligned_cols=267 Identities=25% Similarity=0.392 Sum_probs=206.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--CCeEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNLHLV 89 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 89 (314)
++|...+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+++++.++||||+++++++.+ .+..+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 5789999999999999999999999999999998755332 233457789999999999999999998744 4478999
Q ss_pred Eecccc-cHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 90 FEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 90 ~e~~~g-~l~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
|||++| +|.+.+. .....+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999986 7766654 234568999999999999999999999999999999999999999999999999986543221
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc--HHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||..... .... ..............+..
T Consensus 160 --~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 231 (287)
T cd06621 160 --AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPI-ELLSYIVNMPNPELKDE---- 231 (287)
T ss_pred --cccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChH-HHHHHHhcCCchhhccC----
Confidence 123446778999998866 6678999999999999999999999976532 1111 11111111111111000
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.......++.+.++|.+||..+|++|||+.|+++||||++...+
T Consensus 232 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~ 275 (287)
T cd06621 232 -------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKK 275 (287)
T ss_pred -------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccc
Confidence 00001246789999999999999999999999999999877654
No 232
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.5e-41 Score=284.91 Aligned_cols=252 Identities=33% Similarity=0.518 Sum_probs=210.6
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|.+.+.||+|++|.||++.+..++..+++|.+..... .....+.+|++.++.++|++++++.+.+..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 48899999999999999999988999999999976543 2334667899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
++| +|.+.+......+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+........ ....
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~ 157 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTM 157 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccce
Confidence 995 78777776656799999999999999999999999999999999999999999999999999987654332 3445
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.++..|+|||.+.+ ...+.++|+||||+++++|++|..||...+........... .....+.
T Consensus 158 ~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~------------- 219 (253)
T cd05122 158 VGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN----GPPGLRN------------- 219 (253)
T ss_pred ecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc----CCCCcCc-------------
Confidence 67788999999876 55789999999999999999999999876554444433221 1111100
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRF 293 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 293 (314)
...++..+.++|.+||+.||++|||+.++++|||
T Consensus 220 --------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 220 --------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred --------ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0113788999999999999999999999999998
No 233
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-41 Score=289.58 Aligned_cols=252 Identities=26% Similarity=0.458 Sum_probs=203.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|.||++.++.+++.+++|.+..... .......+.+|+++++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 589999999999999999999999999999998875432 2223335668999999999999999999999899999999
Q ss_pred ecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
||+++ +|.+.+.. ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99995 77766643 334589999999999999999999999999999999999999999999999999987654333
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc--HHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD--IDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
......+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||..... ......+... . .+.. +
T Consensus 162 ~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~-~------- 229 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC-D--YPPL-P------- 229 (267)
T ss_pred HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC-C--CCCC-C-------
Confidence 3334567888999999876 5578999999999999999999999865432 2222222111 0 0100 0
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+..+.+++.+||+.+|++||+++++++
T Consensus 230 ---------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 230 ---------------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ---------------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 1134788999999999999999999999985
No 234
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-42 Score=302.83 Aligned_cols=261 Identities=26% Similarity=0.381 Sum_probs=212.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 89 (314)
+.+|+++++||.|+.+.||++.. .+...|++|+......+......+.+|+..|.+++ |..|+++++|-..+++.|+|
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 46899999999999999999974 34467888888777777777778889999999995 89999999999899999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc--
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-- 167 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-- 167 (314)
||+-+.+|...+.+....++.-.++.+..|++.|+.++|+.||+|.||||.|+++- .|++||+|||+|.....+..+
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccccee
Confidence 99999999999998877677668899999999999999999999999999999884 579999999999887655443
Q ss_pred ccccccCccccCcccccCc----------cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 168 FTHQVFARWYRAPELLFGA----------KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~----------~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
....+||+-|||||.+... -..++++||||||||||+|+.|++||..-.... +++...........+|
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~--aKl~aI~~P~~~Iefp 595 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI--AKLHAITDPNHEIEFP 595 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH--HHHHhhcCCCcccccc
Confidence 3456899999999998531 124789999999999999999999997543222 2222221111111222
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
+. .. ..++.++++.||..||.+||++.++|+|||++-+
T Consensus 596 ~~--------------------~~--~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 596 DI--------------------PE--NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred CC--------------------CC--chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 21 11 3349999999999999999999999999999874
No 235
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.8e-41 Score=287.82 Aligned_cols=252 Identities=27% Similarity=0.443 Sum_probs=212.0
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+|++.+.||+|++|.||++.++.+++.+++|.+............+.+|+++++.++|+||+++.+++.+....++++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 58899999999999999999999999999999987654444445667899999999999999999999999999999999
Q ss_pred ccc-cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 93 MET-DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 93 ~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
++| +|...+... ...+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~ 158 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MA 158 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--Cc
Confidence 976 787777542 346899999999999999999999999999999999999999999999999999776443 22
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....+++.|+|||.+.+ ..++.++|+||||+++++|++|..||...+.......+......
T Consensus 159 ~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 219 (256)
T cd08530 159 KTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP------------------ 219 (256)
T ss_pred ccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC------------------
Confidence 33457788999999876 66788999999999999999999999877665544443221111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......+.++.+++.+||..+|++||++.+++.||++
T Consensus 220 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 ---------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ---------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 1112458889999999999999999999999999985
No 236
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.3e-41 Score=295.31 Aligned_cols=256 Identities=25% Similarity=0.455 Sum_probs=210.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..|.....||+|++|.||++.+..++..+++|.+...... ....+.+|+.+++.++|||++++++++..++..++++|
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 4456677899999999999999889999999998654322 23456689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|++| ++...+.. ..+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+............
T Consensus 99 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 99 FLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred cCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 9986 66665543 34899999999999999999999999999999999999999999999999998755443333344
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..++..|+|||.+.+ ..++.++|+||||+++++|++|..||......+....+... ....+
T Consensus 177 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~-------------- 237 (297)
T cd06659 177 LVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS----PPPKL-------------- 237 (297)
T ss_pred eecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc----CCCCc--------------
Confidence 567888999999876 56789999999999999999999999877665555443211 01000
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.....+++.+.++|.+||+.+|.+||++++++.||||.+-
T Consensus 238 -------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 238 -------KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred -------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 1122458889999999999999999999999999999865
No 237
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.9e-41 Score=286.06 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=203.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
++|++.+.||+|++|.||++..+ .+..+++|.+...... ...+.+|+.++++++||||+++++++...+..+++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 67999999999999999999765 4568999987644322 3466789999999999999999999999999999999
Q ss_pred ccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-cc
Q 021299 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FT 169 (314)
Q Consensus 92 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~ 169 (314)
|++ |+|.+.+....+.+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 998 5888888766667899999999999999999999999999999999999999999999999998765332221 12
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...++..|+|||.+.+ ..++.++|+||+|+++|+|++ |..||......+....+........
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~---------------- 222 (256)
T cd05114 160 GAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR---------------- 222 (256)
T ss_pred CCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------------
Confidence 2234567999999866 568899999999999999999 8999988777766666544321111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+.++.+++.+||..+|++||+++++++
T Consensus 223 -----------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 223 -----------PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -----------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1124778999999999999999999999975
No 238
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2e-41 Score=291.98 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=204.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCC-----cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|++.+.||+|++|.||++.+...+ ..+++|.+..... ......+.+|++.++.++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468999999999999999999876554 6799998864432 2223356789999999999999999999998899
Q ss_pred EEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc
Q 021299 86 LHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~ 149 (314)
.+++|||+++ +|.+++.... ..+++..+..++.|++.||++||++|++|+||||+||+++.++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence 9999999985 8888876532 45888999999999999999999999999999999999999999
Q ss_pred EEEeeccceeeeCCCC--CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHH
Q 021299 150 LKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA 226 (314)
Q Consensus 150 ~~l~df~~~~~~~~~~--~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~ 226 (314)
++|+|||.+....... .......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+..
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS 241 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999997653322 11223445678999998876 567999999999999999997 9999987776665554433
Q ss_pred hhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.... .....+++++.+|+.+||+.||.+||++.+|+++
T Consensus 242 ~~~~---------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 242 RQLL---------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCcC---------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2111 1123468999999999999999999999999864
No 239
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.3e-41 Score=293.74 Aligned_cols=257 Identities=23% Similarity=0.320 Sum_probs=199.4
Q ss_pred HhhccceeeeCccccceEEEEEECC----------------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~----------------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 74 (314)
.++|++.+.||+|+||.||+|.+.. ++..+++|.+..... ......+.+|+++++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCCCCee
Confidence 5789999999999999999997532 334799999875432 22334577899999999999999
Q ss_pred eeeceeccCCeEEEEEecccc-cHHHHHHhCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Q 021299 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTN------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135 (314)
Q Consensus 75 ~~~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~ 135 (314)
++++++.+.+..+++|||+.+ +|.+++.... ..+++..++.++.||+.||.|||++|++|+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999999998999999999975 8888775421 246778899999999999999999999999
Q ss_pred CCCCCceEEecCCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh--CCCc
Q 021299 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPF 211 (314)
Q Consensus 136 di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~--g~~p 211 (314)
||||+||+++.++.++|+|||.+........ ......++..|+|||.+.. ..++.++|+||||+++|+|++ +..|
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999976533221 1122344677999999876 568999999999999999986 4577
Q ss_pred cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 212 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
|......+................ .....+.+++.+.+|+.+||+.||.+|||+.+|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQV--------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccccc--------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 876665555444333221111000 0011234588999999999999999999999994
No 240
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-41 Score=292.22 Aligned_cols=259 Identities=26% Similarity=0.385 Sum_probs=207.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|+||++.+..+|..+++|.+..... ......+.+|+++++.++||||+++++++...+..++++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 4789999999999999999999998999999999875432 333456778999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||++| +|...+.. .+.+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--~~ 159 (284)
T cd06620 83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--IA 159 (284)
T ss_pred ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--cc
Confidence 99996 66665554 4468999999999999999999997 69999999999999999999999999988654222 12
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHH----H---HHHHHHhhCCCCCCCCCCcCc
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDID----Q---LGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~ 241 (314)
....++..|+|||.+.+ ..++.++|+||||+++|++++|..||....... . ............+...+
T Consensus 160 ~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 234 (284)
T cd06620 160 DTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP---- 234 (284)
T ss_pred CccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC----
Confidence 23467888999999876 578899999999999999999999997654421 0 00111111111111000
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
...++.++.+|+.+||+.||++|||++|++.|+||.+
T Consensus 235 ------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 235 ------------------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ------------------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0125788999999999999999999999999999965
No 241
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.1e-41 Score=292.97 Aligned_cols=253 Identities=31% Similarity=0.488 Sum_probs=212.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 89 (314)
++|.+.+.||+|++|.||++.+..+|+.+++|++...... ......+.+|..+++.+. |+||+++++++..++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4799999999999999999999999999999998764322 222345668899999998 99999999999999999999
Q ss_pred Eeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC---
Q 021299 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--- 165 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~--- 165 (314)
||++. ++|.+.+...+ .+++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 99995 58888887654 69999999999999999999999999999999999999999999999999997654332
Q ss_pred -----------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhh
Q 021299 166 -----------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228 (314)
Q Consensus 166 -----------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~ 228 (314)
.......++..|+|||.+.. ..++.++|+||||++++++++|..||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence 11223346778999998876 558899999999999999999999998887655555543221
Q ss_pred CCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH----HHHhcCccc
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA----QQALEHRFA 294 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~h~~~ 294 (314)
. .....+++.+.++|.+||+.+|++||++ ++++.||||
T Consensus 239 ~----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 239 Y----------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred C----------------------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1 1112458899999999999999999999 999999997
No 242
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.2e-41 Score=286.76 Aligned_cols=255 Identities=26% Similarity=0.487 Sum_probs=204.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC---cchhhHHHHHHHhhcCCCCeeeeeceecc--CCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---VNFTALREIKLLKELKSPHIIELIDAFPH--KGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 86 (314)
.+|++.+.||+|++|.||.+.+..+|..+++|.+........ ....+.+|+++++.+.||||+++.+++.+ ....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 478999999999999999999999999999999865432221 12345679999999999999999998865 3568
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
+++|||++| +|.+++... +.+++..+..++.|++.||++||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 899999985 787777654 358899999999999999999999999999999999999999999999999987543211
Q ss_pred ---CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ---~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||.............. .....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~-------- 228 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTNP-------- 228 (265)
T ss_pred ccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCCC--------
Confidence 11223457788999999876 5678999999999999999999999977654544433221 11100
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
.....++..+.+++.+|+. +|.+||++++++.|||+.
T Consensus 229 ---------------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 229 ---------------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ---------------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 1122457889999999995 999999999999999984
No 243
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.9e-41 Score=285.04 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=203.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|+||.+.... +..+++|.+..... ....+.+|+.+++.++||||+++++++.+....+++|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 3679999999999999999997653 45699998864432 2245778999999999999999999998888999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-c
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-F 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~ 168 (314)
||+.+ +|.+.+......+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+......... .
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 99985 788888765557899999999999999999999999999999999999999999999999998765332211 1
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+........
T Consensus 159 ~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------- 222 (256)
T cd05113 159 VGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR--------------- 222 (256)
T ss_pred CCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC---------------
Confidence 22334567999999876 568899999999999999998 8999987776655555433311111
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++.+.+++.+||..+|++||++.+++++
T Consensus 223 ------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 223 ------------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 11247899999999999999999999999864
No 244
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-42 Score=274.25 Aligned_cols=255 Identities=26% Similarity=0.316 Sum_probs=200.0
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-----CCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-----KGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 85 (314)
.+||++.+.||+|+|+-||+++...++..||+|++.-+. .......++|++..++++|||+++++++... ...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 479999999999999999999988999999999998765 2334467799999999999999999998633 335
Q ss_pred EEEEEeccc-ccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCceEEecCCcEEEeecccee
Q 021299 86 LHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~--i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.|++++|+. |++.+.+... +..+++.++..|+.+|++||.+||... ++|+||||+||++..++.++|.|||.++
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 899999987 7899888643 347999999999999999999999998 9999999999999999999999999997
Q ss_pred eeCCCCCcc---------cccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhh
Q 021299 160 IFGSPDRRF---------THQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228 (314)
Q Consensus 160 ~~~~~~~~~---------~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~ 228 (314)
...-.-... .....|..|.|||++.- ....+.++|||||||+||+||.|..||..... ...++.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~GgSla--- 252 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--QGGSLA--- 252 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--cCCeEE---
Confidence 653211111 12344677999998853 23468999999999999999999999964221 000000
Q ss_pred CCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
..........+-...+|+.+.++|+.||+.||.+||++.+++.+
T Consensus 253 -------------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 253 -------------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred -------------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 00000000111122369999999999999999999999999864
No 245
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.5e-41 Score=293.15 Aligned_cols=259 Identities=28% Similarity=0.422 Sum_probs=215.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
...|...+.||+|++|.||++.+..++..+++|.+....... .....+.+|+++++.++|+|++++++++.++...+++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 466899999999999999999998899999999987553322 2233566899999999999999999999999999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|||+.|++.+.+......+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+...... .
T Consensus 104 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----~ 179 (317)
T cd06635 104 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----N 179 (317)
T ss_pred EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc----c
Confidence 999999998888776677999999999999999999999999999999999999999999999999988654321 2
Q ss_pred ccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 170 HQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
...+++.|+|||.+.. ...++.++|+||+|+++|+|++|..||...........+.........
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------- 245 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ-------------- 245 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC--------------
Confidence 3457788999998742 245788999999999999999999998776655555544332111100
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
....++.+.+++.+||+.+|.+||++.++++|+|+.....
T Consensus 246 ------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 246 ------------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ------------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 1134788999999999999999999999999999976554
No 246
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.1e-41 Score=294.38 Aligned_cols=263 Identities=26% Similarity=0.421 Sum_probs=215.5
Q ss_pred ccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
+++.-.+.|...+.||+|++|.||+++++.++..+++|.+...... ......+.+|+++++.++|+|++++.+++....
T Consensus 9 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 88 (308)
T cd06634 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88 (308)
T ss_pred hcCCcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC
Confidence 3444567899999999999999999999999999999998754222 222335668999999999999999999999999
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
..++|+||+.|++.+.+......+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||.+......
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 99999999999998888766667899999999999999999999999999999999999999999999999998765432
Q ss_pred CCcccccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 165 DRRFTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
....+++.|+|||.+.+ ....+.++|+||||+++|+|++|..||...+.......+..... +.
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~-------- 233 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---PA-------- 233 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC---CC--------
Confidence 23456778999998752 24578899999999999999999999876554444433322111 00
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
......+..+.+||.+||..+|.+||++++++.|||+....
T Consensus 234 ---------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 234 ---------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ---------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 00123588899999999999999999999999999998753
No 247
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.8e-41 Score=291.60 Aligned_cols=258 Identities=24% Similarity=0.421 Sum_probs=210.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..|.....||+|++|.||++..+.+|..+++|++.... ......+.+|+.+++.++|+|++++++.+..++..+++||
T Consensus 20 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 97 (292)
T cd06657 20 TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 97 (292)
T ss_pred HHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEe
Confidence 34445578999999999999999999999999885432 2233456689999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|+++ ++.+.+.. ..+++..+..++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+............
T Consensus 98 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 98 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 9987 56555433 34899999999999999999999999999999999999999999999999998765433333334
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||...........+..... ..+
T Consensus 176 ~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~-------------- 236 (292)
T cd06657 176 LVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP----PKL-------------- 236 (292)
T ss_pred cccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC----ccc--------------
Confidence 567888999998865 5678999999999999999999999987766655544433211 110
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.....+++.+.+++.+||+.+|.+||++++++.||||.....
T Consensus 237 -------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 237 -------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 011245888999999999999999999999999999998764
No 248
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.8e-41 Score=301.28 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=199.3
Q ss_pred HhhccceeeeCccccceEEEEEE-----CCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 84 (314)
.++|++.+.||+|+||.||++.+ ..++..+++|.+..... ......+.+|+++++.+ +||||+++++++...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 46899999999999999999964 34566899999865432 22234566899999999 8999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCC----------------------------------------------------------
Q 021299 85 NLHLVFEFMET-DLETVIRNTN---------------------------------------------------------- 105 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~---------------------------------------------------------- 105 (314)
..++||||++| +|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 99999999984 8888876432
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc--
Q 021299 106 ----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-- 167 (314)
Q Consensus 106 ----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-- 167 (314)
..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 24778889999999999999999999999999999999999999999999999865432211
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||.................. ..
T Consensus 273 ~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~----------- 337 (375)
T cd05104 273 KGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR---ML----------- 337 (375)
T ss_pred cCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc---CC-----------
Confidence 112234566999999876 668999999999999999997 88898765544333333221100 00
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 338 ------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 338 ------------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 011247889999999999999999999999864
No 249
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=284.50 Aligned_cols=269 Identities=27% Similarity=0.408 Sum_probs=216.4
Q ss_pred cccccHHHHhhccce-eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeecee
Q 021299 3 EVDLSKKVADRYLKR-EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAF 80 (314)
Q Consensus 3 ~~~~~~~~~~~y~~~-~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~ 80 (314)
+-.++..+.+-|++. +.||+|+++.|-.+....+|..||+|++.+... ..+....+|++++.+.+ |+||++++++|
T Consensus 68 ~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 68 TSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred cccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 445666677888764 578999999999999999999999999988743 34556779999999985 99999999999
Q ss_pred ccCCeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC---cEEEeecc
Q 021299 81 PHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFG 156 (314)
Q Consensus 81 ~~~~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~---~~~l~df~ 156 (314)
+++..+|+|||.+.| .+++-++++. .+++..+..+..+|+.||.+||.+||+|+|+||+||+....+ -||||||.
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccc
Confidence 999999999999986 7777777655 499999999999999999999999999999999999996654 48999998
Q ss_pred ceeeeCCCC-------CcccccccCccccCccccc----CccCCCCcchHhhHHHHHHHHHhCCCccCCCC---------
Q 021299 157 LARIFGSPD-------RRFTHQVFARWYRAPELLF----GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS--------- 216 (314)
Q Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~y~sPE~~~----~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~--------- 216 (314)
+..-..... .....++|+..|||||+.. ....|..+.|.||||+|+|-|+.|.+||.+.=
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG 304 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG 304 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC
Confidence 774332111 1122345666799999863 23468999999999999999999999995532
Q ss_pred ------cHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 217 ------DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 217 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......++..+....+..+| ..+|.++.++|+.+|..|+.+|.++.+++.
T Consensus 305 e~Cr~CQ~~LFesIQEGkYeFPdkdW------------------------ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 305 EVCRVCQNKLFESIQEGKYEFPDKDW------------------------AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccHHHHHHHHHHHhccCCcCChhhh------------------------HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 12233344444444444444 357999999999999999999999999999
Q ss_pred CccccccC
Q 021299 291 HRFAKSFN 298 (314)
Q Consensus 291 h~~~~~~~ 298 (314)
|||++..-
T Consensus 361 hPw~~~~~ 368 (463)
T KOG0607|consen 361 HPWVQRCA 368 (463)
T ss_pred Cccccccc
Confidence 99998763
No 250
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.2e-41 Score=285.18 Aligned_cols=244 Identities=23% Similarity=0.343 Sum_probs=196.1
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-c
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-D 96 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~ 96 (314)
+.||+|++|.||++.+..+++.+++|.+.... .......+.+|+++++.++||||+++++++......++||||+.| +
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 46999999999999998899999999876432 222334677899999999999999999999999999999999985 8
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc--cccccC
Q 021299 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF--THQVFA 174 (314)
Q Consensus 97 l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~ 174 (314)
|.+.+......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.......... .....+
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 888887666678999999999999999999999999999999999999999999999999987543211111 111223
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+...... .
T Consensus 160 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~----~------------------ 216 (252)
T cd05084 160 VKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL----P------------------ 216 (252)
T ss_pred eeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC----C------------------
Confidence 45999999876 567899999999999999997 88888766554443333221110 0
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....+..+.+++.+||+.+|++|||+.++++
T Consensus 217 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 217 -----CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11235889999999999999999999999874
No 251
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.9e-41 Score=285.34 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=203.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
..+|.+.+.||+|++|.||++.++.+++.+++|.+..... ....+.+|++.++.++|+|++++++++..++..+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch---HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 4578999999999999999999999999999999864322 2345678999999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||++ ++|.+.+... ...+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 9997 4888887654 3458999999999999999999999999999999999999999999999999997654322111
Q ss_pred -cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 169 -~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 162 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 224 (263)
T cd05052 162 HAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM---------------- 224 (263)
T ss_pred cCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC----------------
Confidence 11223456999998866 667899999999999999998 88999876655544444322111
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++.++.+++.+||+.||++||++.++++
T Consensus 225 -----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 225 -----------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 111345889999999999999999999999875
No 252
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.7e-41 Score=287.89 Aligned_cols=251 Identities=32% Similarity=0.538 Sum_probs=206.4
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l 97 (314)
||.|++|.||++.+..+|+.+++|.+...... ......+.+|+++++.++|+|++++++.+......++++|++.| +|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999998765432 22334566899999999999999999999999999999999986 77
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--------ccc
Q 021299 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--------RFT 169 (314)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--------~~~ 169 (314)
.+.+...+ .+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 77776544 689999999999999999999999999999999999999999999999999875433211 223
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...++..|++||.+.. ...+.++|+||||++++++++|..||...........+..... .++.
T Consensus 160 ~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~----------- 222 (265)
T cd05579 160 RIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI-----EWPE----------- 222 (265)
T ss_pred CcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc-----CCCc-----------
Confidence 3456778999999876 4478999999999999999999999987776655544433110 1110
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH---HHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~---~ell~h~~~~~~~ 298 (314)
...+++.+.+++.+||+.+|.+|||+ .++++||||++++
T Consensus 223 ----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 223 ----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred ----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 01248899999999999999999999 9999999999763
No 253
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.7e-41 Score=285.86 Aligned_cols=252 Identities=19% Similarity=0.329 Sum_probs=204.8
Q ss_pred HhhccceeeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|++.+.||+|+||+||+|..+.. ...+++|.+..... ......+..|+.+++.++||||+++++++..++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 36899999999999999999987654 35799998865432 222345668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++||++.| +|.+++....+.+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 99999985 88888877666799999999999999999999999999999999999999999999999999987642221
Q ss_pred c--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 167 R--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 167 ~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
. .....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+........
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 229 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP----------- 229 (266)
T ss_pred ceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC-----------
Confidence 1 112234567999998876 567899999999999999997 9999977665555544433211111
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++.+.+++.+||+.+|++||++++++++
T Consensus 230 ----------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 230 ----------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 12358899999999999999999999999864
No 254
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.7e-41 Score=287.76 Aligned_cols=252 Identities=27% Similarity=0.425 Sum_probs=197.2
Q ss_pred eeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc-hhhHHH---HHHHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FTALRE---IKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-~~~~~e---~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
.||+|++|.||++.+..+++.|++|.+.......... ....++ .+.++...||+|+.+.+++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999987654332211 112233 334445579999999999999999999999998
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
| +|...+. ..+.+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||.+...... ......+
T Consensus 81 g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVG 157 (278)
T ss_pred CCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCC
Confidence 6 5655554 4456999999999999999999999999999999999999999999999999998755322 2233467
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
+..|+|||.+.++..++.++|+||+|+++|+|++|..||............ ...... ..
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~~-~~------------------- 216 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTM-AV------------------- 216 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH-HHhhcc-CC-------------------
Confidence 888999999876556889999999999999999999999765322211111 100000 00
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.....++.++.+++.+||..+|++|| ++.++++||||+..+
T Consensus 217 ----~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 217 ----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred ----CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 11223588999999999999999999 999999999999875
No 255
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-43 Score=306.12 Aligned_cols=257 Identities=28% Similarity=0.435 Sum_probs=225.0
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
..|.-++.||+|+||.||.+++..+.+.||||++..+.. ....+..+.+|++.|+++.|||.+.+.++|..+...|+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 567888999999999999999999999999999987754 3456678889999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|||-|+-.+++.-.++++-+..+..|..+.+.||+|||+++.+|+|||..||++++.|.|||+|||.+....+. ..
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----ns 181 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----NS 181 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch----hc
Confidence 99999988888877778999999999999999999999999999999999999999999999999999776432 45
Q ss_pred cccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 171 QVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
.+|||+|||||++.. .+.|+-+.||||||++..+|...++|.-+.+.-..+.-+.+...+...
T Consensus 182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq--------------- 246 (948)
T KOG0577|consen 182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--------------- 246 (948)
T ss_pred ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC---------------
Confidence 789999999999752 467899999999999999999999888777777776666654322211
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.+..+..+.+|+..||++-|..|||.+++|.|+|..--.
T Consensus 247 -----------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 247 -----------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred -----------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 123488999999999999999999999999999987543
No 256
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.8e-40 Score=283.42 Aligned_cols=252 Identities=29% Similarity=0.495 Sum_probs=204.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|.||++....+|+.+++|.+....... .....+.+|++++++++|++++++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 68999999999999999999999899999999987543322 22446678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
||++| +|..++.. ....+++..+..++.+++.|+++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99985 88777753 244689999999999999999999999999999999999999999999999999876644333
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcH--HHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI--DQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...... .....+... .....+
T Consensus 162 ~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~------- 229 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC----DYPPLP------- 229 (267)
T ss_pred ccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC----CCCCCC-------
Confidence 3344567888999998876 56789999999999999999999998654321 111111111 000000
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...++..+.++|.+||..+|++|||+.+|++
T Consensus 230 ---------------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 230 ---------------ADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1145789999999999999999999999874
No 257
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.9e-41 Score=300.35 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=199.1
Q ss_pred HhhccceeeeCccccceEEEEEECCC-----CcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 84 (314)
.++|.+.+.||+|+||.||++.+... +..|++|.+...... .....+.+|+++++.+ +|+||+++++++...+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 57899999999999999999986443 357999999754322 2233566899999999 8999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCC----------------------------------------------------------
Q 021299 85 NLHLVFEFMET-DLETVIRNTN---------------------------------------------------------- 105 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~---------------------------------------------------------- 105 (314)
..+++|||+.+ +|.+.+....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999984 8887775321
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc--ccccc
Q 021299 106 -----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR--FTHQV 172 (314)
Q Consensus 106 -----------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~ 172 (314)
.++++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......... .....
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 24788889999999999999999999999999999999999999999999999765332211 11223
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+..... ....
T Consensus 276 ~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~---~~~~--------------- 336 (374)
T cd05106 276 LPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY---QMSR--------------- 336 (374)
T ss_pred CccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc---CccC---------------
Confidence 4567999999876 668999999999999999997 9999977655443333332210 0000
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...+++++.+++.+||+.||.+|||+.++++
T Consensus 337 --------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 337 --------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred --------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1134889999999999999999999999875
No 258
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.3e-41 Score=286.53 Aligned_cols=249 Identities=21% Similarity=0.350 Sum_probs=206.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||.|++|.||++.++. +..+++|.+...... ....+..|+.+++.++|+||+++++++......+++|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLL--KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchh--hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 4689999999999999999999877 789999998754331 2335668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||+++ +|.+.+... ...+++..+..++.||+.|+.+||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS 161 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence 99985 888888764 4568999999999999999999999999999999999999999999999999997664433333
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....++..|+|||.+.. ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 162 ~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 223 (261)
T cd05148 162 SDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM----------------- 223 (261)
T ss_pred cCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-----------------
Confidence 33445667999998876 568899999999999999998 88999877766655554432111
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+.....++++.+++.+||+.||++|||+.++++
T Consensus 224 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 ----------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 111345889999999999999999999999875
No 259
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.5e-41 Score=291.26 Aligned_cols=265 Identities=25% Similarity=0.364 Sum_probs=210.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|++.+.||+|++|.||++.+..+++.+++|.+....... ....+..|+.++... .|+||+++++++.+....+++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 478999999999999999999999889999999997543222 223445566655555 599999999999999999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||++++++.+.+......+++..+..++.|++.|++|||+ .|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~ 171 (296)
T cd06618 93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-K 171 (296)
T ss_pred eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-c
Confidence 9999988888887766689999999999999999999997 5999999999999999999999999999876533222 2
Q ss_pred cccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCc-HHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD-IDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....++..|+|||.+.+. ..++.++|+||||+++|+|++|..||..... .+....+..... ..++.
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~------ 241 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP----PSLPP------ 241 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC----CCCCC------
Confidence 233466779999998653 2468899999999999999999999965332 233333222110 00100
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
...++.++.+|+.+||..||.+||++++++.||||+.......
T Consensus 242 ---------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~ 284 (296)
T cd06618 242 ---------------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEV 284 (296)
T ss_pred ---------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHH
Confidence 0135789999999999999999999999999999998765443
No 260
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.7e-41 Score=283.67 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=203.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.+|++.+.||+|++|.||++.++ ++..+++|.+..... ....+.+|+++++.++|+||+++++++...+..+++||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 46899999999999999999875 456899999864332 22356789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-cc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~ 169 (314)
+++| +|.+.+......+++..+..++.|++.|+++||++|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 9975 788888766667899999999999999999999999999999999999999999999999998765432211 11
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+.......
T Consensus 160 ~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 221 (256)
T cd05059 160 GTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLY----------------- 221 (256)
T ss_pred CCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCC-----------------
Confidence 2223456999998876 567899999999999999998 789998777666655543321111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+.++.+++.+||..+|++|||+.++++.
T Consensus 222 ----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 222 ----------RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 112358899999999999999999999999864
No 261
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-40 Score=288.01 Aligned_cols=259 Identities=20% Similarity=0.314 Sum_probs=204.5
Q ss_pred HhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|++.+.||+|++|.||++..+. .+..+++|.+...... .....+.+|+..++.++|+||+++++++.....
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 5899999999999999999997542 3457999987643321 122345689999999999999999999988899
Q ss_pred EEEEEeccc-ccHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeec
Q 021299 86 LHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF 155 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df 155 (314)
.+++|||+. |+|.+++.... ...+...+..++.|++.||.|||+++++|+||||+||+++.++.++|+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcC
Confidence 999999998 58888886432 23466788999999999999999999999999999999999999999999
Q ss_pred cceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCC
Q 021299 156 GLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT 232 (314)
Q Consensus 156 ~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~ 232 (314)
|.+......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~-- 240 (288)
T cd05061 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-- 240 (288)
T ss_pred CccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--
Confidence 998754322211 112234567999999876 567899999999999999998 67899877766655444322100
Q ss_pred CCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc------CccccccC
Q 021299 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE------HRFAKSFN 298 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~------h~~~~~~~ 298 (314)
......++.+.+++.+||+.||++|||+.++++ ||||+.++
T Consensus 241 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 241 -------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred -------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 011234789999999999999999999999987 99998753
No 262
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.1e-41 Score=288.09 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=204.2
Q ss_pred HhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|.+.+.||+|++|.||++.... ++..+++|.+...... .....+.+|+++++.+.|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 4679999999999999999997643 3578999998654332 123467789999999999999999999999999
Q ss_pred EEEEEecccc-cHHHHHHhCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 86 LHLVFEFMET-DLETVIRNTN-------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
.+++|||++| +|.+++...+ ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 9999999985 8888876432 3478889999999999999999999999999999999999999999
Q ss_pred EeeccceeeeCCCC--CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhh
Q 021299 152 LADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAF 228 (314)
Q Consensus 152 l~df~~~~~~~~~~--~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~ 228 (314)
|+|||.+....... .......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+....
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR 241 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 99999997643222 11223345677999999876 668999999999999999998 999998777666555544321
Q ss_pred CCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.... ...++..+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 242 LLQR---------------------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred cCCC---------------------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1111 1245889999999999999999999999975
No 263
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.4e-41 Score=285.34 Aligned_cols=253 Identities=26% Similarity=0.444 Sum_probs=204.5
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCc---ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+|.+.+.||+|++|.||++.+...+..+++|.++.... .......+..|+.+++.++||||+++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 68999999999999999999888777777776654322 222223455788999999999999999999988999999
Q ss_pred Eecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 90 FEFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
+||+.+ ++.+.+.. ....+++..+..++.|++.|+.+||++|++|+||+|+||+++. +.++|+|||.+.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999986 77766643 3456999999999999999999999999999999999999974 579999999998764444
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.......+++.|+|||.+.+ ..++.++|+||+|+++++|++|..||...........+.... .
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~------------ 222 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP----T------------ 222 (260)
T ss_pred ccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC----C------------
Confidence 44444567788999998865 567889999999999999999999997766555444433211 0
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
......++.++.++|.+||+.+|++||+++++++||||
T Consensus 223 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 -----------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -----------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 01122458899999999999999999999999999997
No 264
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.6e-41 Score=285.92 Aligned_cols=254 Identities=24% Similarity=0.423 Sum_probs=202.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|.+.+.||.|++|.||++.+..++..+++|.+...... ......+.+|+++++.+.|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 5799999999999999999999889999999988754322 222345668999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMET-DLETVIRN---TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
|+++| +|.+.+.. ....+++..++.++.||+.|+.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 99986 78777653 344689999999999999999999999999999999999999999999999999876544333
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||....... ...............
T Consensus 162 ~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~---------- 228 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSLCKKIEQCDYPPL---------- 228 (267)
T ss_pred ccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchH--HHHhhhhhcCCCCCC----------
Confidence 3334567888999999876 567899999999999999999999986543221 111111111000000
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++.+.+++.+||..||++|||+++|++
T Consensus 229 ------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 229 ------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 01235889999999999999999999997763
No 265
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2e-41 Score=288.38 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=197.1
Q ss_pred cceeeeCccccceEEEEEEC----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 15 LKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+.+.||.|+||.||+|... ..+..|++|.+... ........+.+|++.++.++||||+++++++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeecccccccccccccccccccccccccccccc
Confidence 46789999999999999887 34568999999543 22223567789999999999999999999999888899999
Q ss_pred eccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC--C
Q 021299 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--R 166 (314)
Q Consensus 91 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~--~ 166 (314)
||+. |+|.+.+... ...+++..+..++.||+.||.|||+++++|++|+++||+++.++.+||+|||.+....... .
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998 6899999877 6679999999999999999999999999999999999999999999999999998762221 1
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..........|+|||.+.. ..++.++||||||+++|++++ |..||......+....+........
T Consensus 161 ~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------- 226 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI------------- 226 (259)
T ss_dssp ESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS-------------
T ss_pred ccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccee-------------
Confidence 2223345667999999877 457999999999999999999 6799988877666666644322111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...++..+.++|.+||..||.+|||+.++++
T Consensus 227 --------------~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 227 --------------PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --------------BTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --------------ccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1245889999999999999999999999975
No 266
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-40 Score=282.83 Aligned_cols=245 Identities=28% Similarity=0.429 Sum_probs=205.4
Q ss_pred eeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 18 EVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
+.||+|++|.||++.+... +..+++|.+....... ....+.+|++.++.++|+|++++++++......+++|||+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 4689999999999998865 8899999997665433 34566789999999999999999999999999999999996
Q ss_pred -ccHHHHHHhC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 95 -TDLETVIRNT--------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 95 -g~l~~~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
|+|.+.+... ...+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 5888888776 4679999999999999999999999999999999999999999999999999998764432
Q ss_pred --CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 --RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 --~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.......+++.|+|||.+.. ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------ 226 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRL------------ 226 (262)
T ss_pred ccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence 22334456778999998877 478999999999999999998 58999888766665555432111
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++++.+++.+||+.+|++|||++|++++
T Consensus 227 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 227 ---------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ---------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1122458899999999999999999999999875
No 267
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=284.94 Aligned_cols=259 Identities=25% Similarity=0.352 Sum_probs=223.6
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|..+++||+|.||.|.+++.+.+|+.||+|++++...-.. ....-..|-++|+..+||.+..+.-.|+.+.+.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 5789999999999999999999999999999999987642211 112234688899999999999999999999999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
|||.+|+-+-+-.++...++++.++-+...|+.||.|||+++|+++|||.+|.+++.+|.+||+|||+|+.--.......
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 99999754444444555699999999999999999999999999999999999999999999999999987666666777
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
..+|||.|+|||++.. ..|..+.|.|.+||+||+|++|+.||-+.+.......+...-..
T Consensus 327 TFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k------------------- 386 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK------------------- 386 (516)
T ss_pred cccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc-------------------
Confidence 7899999999999977 77899999999999999999999999988887777766544221
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
++..++++++.|+..+|.+||.+|.. +.||.+|+||.+++
T Consensus 387 ---------FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 387 ---------FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred ---------CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 12356999999999999999999974 78999999999885
No 268
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=286.75 Aligned_cols=241 Identities=18% Similarity=0.178 Sum_probs=195.6
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-chhhHHHHHHHhhcCCCCeeeeeceecc----CCeEEEEEec
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLKELKSPHIIELIDAFPH----KGNLHLVFEF 92 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~iv~e~ 92 (314)
..|++|+++.||++.. +|+.|++|.+......... ...+.+|++++++++||||+++++++.+ ....+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999976 5889999999765432221 2456689999999999999999998865 4578999999
Q ss_pred ccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
++| +|.+.+... +.+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 104 ~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~~ 179 (283)
T PHA02988 104 CTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---FK 179 (283)
T ss_pred CCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---cc
Confidence 996 677777654 4689999999999999999999984 99999999999999999999999999987553322 23
Q ss_pred cccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 171 QVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
..++..|+|||.+.+. ..++.++||||||+++|+|++|..||......+....+....... ..
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---~~------------- 243 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL---KL------------- 243 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC---CC-------------
Confidence 4577889999998652 467999999999999999999999999877666555543321111 01
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....++++.+|+.+||+.||++|||++++++
T Consensus 244 ----------~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 244 ----------PLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----------CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 1135889999999999999999999999985
No 269
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5e-41 Score=295.65 Aligned_cols=282 Identities=20% Similarity=0.226 Sum_probs=205.7
Q ss_pred eeeCcc--ccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEG--TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g--~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
..||.| ++|+||++.+..+|+.|++|.+............+.+|+.+++.++||||+++++++..++..++++||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 899999999999999999999876544333345667899999999999999999999999999999999985
Q ss_pred -cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc------
Q 021299 96 -DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR------ 167 (314)
Q Consensus 96 -~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~------ 167 (314)
++.+.+... ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 787777654 335899999999999999999999999999999999999999999999999765332111110
Q ss_pred -ccccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 -FTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 -~~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.....++..|+|||.+.+. ..++.++|+||||+++++|++|.+||................... +............
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 242 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYS-PLDITTFPCEESR 242 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCC-Cccccccchhhhh
Confidence 0111234569999998663 346899999999999999999999998776555444333221100 0000000000000
Q ss_pred h-----hh---------c-----ccc-CCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 246 V-----EY---------Q-----YVA-APPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 246 ~-----~~---------~-----~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
. .. . ... .....+.....++.+.+|+++||+.||++|||++|+++||||+...++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0 00 0 000 000011123467889999999999999999999999999999988765
No 270
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2e-40 Score=290.12 Aligned_cols=272 Identities=20% Similarity=0.221 Sum_probs=200.7
Q ss_pred ccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cHHHHHH
Q 021299 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR 102 (314)
Q Consensus 24 ~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l~~~~~ 102 (314)
+.+.||.++...+++.+++|++............+.+|+++++.++|+||+++++++.+++..+++|||+++ ++.+.+.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 445566666677899999999987644444445677999999999999999999999999999999999985 7777776
Q ss_pred hC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-------cccccccC
Q 021299 103 NT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-------RFTHQVFA 174 (314)
Q Consensus 103 ~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~ 174 (314)
.. ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+||+.+........ ......++
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN 171 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence 53 34689999999999999999999999999999999999999999999999998875532211 11223456
Q ss_pred ccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch--------
Q 021299 175 RWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY-------- 245 (314)
Q Consensus 175 ~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 245 (314)
..|+|||.+... ..++.++|+||+|+++++|++|..||..........+..... .+..+.........
T Consensus 172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
T cd08216 172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT---VPCLLDKSTYPLYEDSMSQSRS 248 (314)
T ss_pred ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc---CccccccCchhhhcCCcCcccc
Confidence 679999998653 347889999999999999999999998766544433222111 11111000000000
Q ss_pred -hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 246 -VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
.................++.++.+|+.+||+.||++|||++++|+||||+.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 249 SNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00000001111122234567899999999999999999999999999999775
No 271
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=273.43 Aligned_cols=263 Identities=25% Similarity=0.398 Sum_probs=217.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++..+++.||+|+.|+|++++.+.+|...|+|.+++....+ ..+++...+.++... ++|+||+++++|-.+..+++.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 355678899999999999999999999999999998775444 334555666665554 489999999999999999999
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||.|.-....++....+++++..+-.+..-+++||.||-. +|++|+|+||+||++++.|++||||||++-.+-. ....
T Consensus 170 MelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd-SkAh 248 (391)
T KOG0983|consen 170 MELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD-SKAH 248 (391)
T ss_pred HHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec-cccc
Confidence 9999988888888888889999999999999999999986 5999999999999999999999999999987643 3333
Q ss_pred cccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCC-CcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 169 THQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
....|-+.|||||.+.. ...|...+||||||+.+++|.||+.||... .+.+.+..+... .|..++.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~----ePP~L~~------- 317 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE----EPPLLPG------- 317 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc----CCCCCCc-------
Confidence 45567788999999864 245789999999999999999999999874 455666555442 1122221
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
..+.|+.+.+++..||++|+.+||.-.++|+|||+......
T Consensus 318 --------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a 358 (391)
T KOG0983|consen 318 --------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA 358 (391)
T ss_pred --------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence 12369999999999999999999999999999999877543
No 272
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-40 Score=285.24 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=200.5
Q ss_pred HHhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
..++|++.+.||+|++|.||.+.+.. ++..+++|.+..... ......+.+|+.+++.++|+||+++++++..+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 57899999999999999999997642 356799998754322 122335678999999999999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEee
Q 021299 85 NLHLVFEFMET-DLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLAD 154 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~d 154 (314)
..+++|||+++ +|.+++.... ...+...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 99999999985 8888876532 2356788899999999999999999999999999999999999999999
Q ss_pred ccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCC
Q 021299 155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (314)
Q Consensus 155 f~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 231 (314)
||.+......... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~- 240 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL- 240 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence 9998754322111 112334667999999876 668999999999999999998 67898876665555443322110
Q ss_pred CCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++.+.+++.+||+.||++|||+.|++++
T Consensus 241 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 241 --------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112357889999999999999999999999864
No 273
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=321.85 Aligned_cols=262 Identities=26% Similarity=0.371 Sum_probs=224.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|.++++||.|+||.|.+++++.+++.||+|.+.+-.... ....-|++|-.++..-+.+=|+.++-.|+++++.|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 489999999999999999999999999999999997743322 2223456777788877889999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
|+|++| +|+.++.+.. .+++..++.+...|+.||..||+.|+|||||||+|||++.+|.++|.|||.|-.+..++. .
T Consensus 154 MdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~ 232 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR 232 (1317)
T ss_pred EecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence 999985 8888888777 899999999999999999999999999999999999999999999999999998875543 4
Q ss_pred ccccccCccccCcccccC---c-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 168 FTHQVFARWYRAPELLFG---A-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~---~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
....+|||-|+|||++.. + ..|++.+|.|||||++|+|+.|..||=+..-.+++..|+..-.. ..+|+
T Consensus 233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~---l~FP~----- 304 (1317)
T KOG0612|consen 233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES---LSFPD----- 304 (1317)
T ss_pred eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh---cCCCc-----
Confidence 556789999999999853 2 56899999999999999999999999999999999988776211 11111
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcCccccccC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRFAKSFN 298 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h~~~~~~~ 298 (314)
...+|+++++||+++++ +|+.|.. ++++-.||||.+++
T Consensus 305 ----------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 305 ----------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred ----------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 12379999999999998 4778888 99999999999874
No 274
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-40 Score=290.97 Aligned_cols=251 Identities=22% Similarity=0.379 Sum_probs=200.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcE----EEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT----VAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~----~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
..+|++.+.||+|+||.||++.+..++.. +++|.+..... ......+.+|+.+++.++||||+++++++..+ ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46799999999999999999987666553 89998864322 22334667899999999999999999988664 46
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
+++++++. |++.+.+......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 78999987 58989888776678999999999999999999999999999999999999999999999999998764332
Q ss_pred Ccc--cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 RRF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ~~~--~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
... .....+..|++||.+.+ ..++.++||||||+++|+|++ |..||......+... +..... ..
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~-~~---------- 230 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGE-RL---------- 230 (316)
T ss_pred cceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCC-CC----------
Confidence 221 12223567999999876 668999999999999999997 899997765444332 222110 00
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
+..+..+..+.+++.+||..+|++||++.+++.+
T Consensus 231 ---------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 231 ---------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ---------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0112347789999999999999999999999986
No 275
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.7e-40 Score=285.82 Aligned_cols=250 Identities=22% Similarity=0.364 Sum_probs=201.3
Q ss_pred HhhccceeeeCccccceEEEEEEC-----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|.+.+.||+|++|+||++... .++..+++|.+.... ......+.+|+++++.++||||+++.+++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 468999999999999999999752 345578999886432 2223356789999999999999999999999999
Q ss_pred EEEEEecccc-cHHHHHHhCC------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEE
Q 021299 86 LHLVFEFMET-DLETVIRNTN------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL 152 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l 152 (314)
.+++|||+++ +|.+++.... ..+++..+..++.|++.||++||++|++|+||||+||+++.++.++|
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 9999999984 8888876432 24899999999999999999999999999999999999999999999
Q ss_pred eeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhC
Q 021299 153 ADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFG 229 (314)
Q Consensus 153 ~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 229 (314)
+|||.+........ ......+++.|+|||.+.+ ..++.++|+||||+++++|++ |..||...........+.....
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~ 240 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 240 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999975533221 1122334667999998876 668999999999999999998 8899987776665555433211
Q ss_pred CCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
. . .....+.++.+|+.+||+.||.+|||+.+++.
T Consensus 241 ~----~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 241 L----Q-----------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred C----C-----------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 0 11235789999999999999999999999853
No 276
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.5e-40 Score=280.98 Aligned_cols=248 Identities=20% Similarity=0.343 Sum_probs=202.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++... ++..+++|.+..... ....+.+|+.+++.++|+||+++++.+...+..++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 578999999999999999999864 557899998764322 2346678999999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-
Q 021299 91 EFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (314)
Q Consensus 91 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~- 167 (314)
|++. |+|.+.+... ...+++..+..++.|++.||++||+.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 9997 4888887653 456889999999999999999999999999999999999999999999999999876432211
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+......
T Consensus 161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 223 (261)
T cd05072 161 REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM---------------- 223 (261)
T ss_pred cCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 122334567999998876 567889999999999999998 89999877666655554332111
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+....++.++.+++.+||..+|++||+++++++
T Consensus 224 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 -----------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111245889999999999999999999999864
No 277
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.1e-40 Score=284.87 Aligned_cols=253 Identities=19% Similarity=0.291 Sum_probs=201.8
Q ss_pred HHhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
-.++|.+.+.||+|++|.||++.+.. ++..+++|.+...... .....+.+|+.+++.++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE-QDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 35889999999999999999999876 6678999987644322 22335678999999999999999999998888
Q ss_pred eEEEEEecccc-cHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC---cEEEee
Q 021299 85 NLHLVFEFMET-DLETVIRNTN------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLAD 154 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~---~~~l~d 154 (314)
..+++|||+.| +|.+++...+ ..+++..+..++.||+.|++|||+++++|+||+|+||+++.++ .++|+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 89999999975 8888886543 2588999999999999999999999999999999999998765 599999
Q ss_pred ccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCC
Q 021299 155 FGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (314)
Q Consensus 155 f~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 231 (314)
||.+......... ......+..|+|||.+.+ ..++.++||||||+++|+|++ |..||...........+.....
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-- 239 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR-- 239 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--
Confidence 9999765322111 112223456999999876 568999999999999999996 8899987666554433322100
Q ss_pred CCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.. ....++..+.+++.+||..+|++||++.++++|
T Consensus 240 --~~-----------------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 --LD-----------------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred --CC-----------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 112458899999999999999999999999976
No 278
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.8e-40 Score=279.06 Aligned_cols=246 Identities=22% Similarity=0.359 Sum_probs=200.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++.+. ++..+++|.+...... ...+.+|+.+++.++|++++++++++.. ...+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence 578999999999999999999765 5567999998754332 2457789999999999999999998754 5678999
Q ss_pred ecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 91 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
||+.+ +|.+.+... ...+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 99985 888888654 34589999999999999999999999999999999999999999999999999987543221 1
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....++..|+|||.+.+ ..++.++|+||||+++|+|++ |.+||......+....+......
T Consensus 160 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (260)
T cd05070 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM---------------- 222 (260)
T ss_pred ccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 122334567999998866 567899999999999999999 88999877666655554322111
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
+.....+..+.+|+.+||..+|++|||+++++
T Consensus 223 -----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 223 -----------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred -----------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 11224588999999999999999999999987
No 279
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-42 Score=304.76 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=216.1
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
.-+||+|.+|+||-+++..+..++|||.+.-.. .+...-..+|+...++++|.|||++.+.+.+++++-|.||.++|
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 347999999999999999999999999986432 22233556899999999999999999999999999999999986
Q ss_pred cHHHHHHhCCCCC--CHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceeeeCCCCCcccccc
Q 021299 96 DLETVIRNTNIFL--SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQV 172 (314)
Q Consensus 96 ~l~~~~~~~~~~l--~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~ 172 (314)
+|.+++...=+++ ++..+..+..||+.||.|||++.|+|+|||-+||+|+. .|.+||+|||.++..-.-........
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 7777777777777 88899999999999999999999999999999999975 68999999999988766666667788
Q ss_pred cCccccCcccccC-ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 173 FARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~-~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
||..|||||++.. ...|..++|||||||++.+|.||++||-........--.+..+..-
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvH-------------------- 797 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVH-------------------- 797 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecC--------------------
Confidence 9999999999964 3458999999999999999999999997766555433222222111
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
++++..++++++.+|.+|+.+||.+||++.++|.+||++.-+++
T Consensus 798 -----P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 798 -----PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred -----CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCC
Confidence 12234579999999999999999999999999999999977443
No 280
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=300.93 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=210.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++..+...||+|+||+||++++- ..||||.+............|.+|+.+++.-+|.||+-+.+++-..+. .||+
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 577889999999999999999763 369999999888777766788899999999999999999999977777 9999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc--
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-- 167 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-- 167 (314)
.+|+| +|...++-..-.+.....+.|++||++|+.|||.++|+|+|||..|||+.++++|||+|||++.........
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 99999 888888877777999999999999999999999999999999999999999999999999999865443222
Q ss_pred ccccccCccccCcccccC--ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 FTHQVFARWYRAPELLFG--AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~--~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..-..|...|+|||++.. +.+++.++||||+|+++|||++|..||........+..+-++...+..
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~------------ 614 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDL------------ 614 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccc------------
Confidence 223456677999999853 457899999999999999999999999955555544443333222221
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.......+.++++|+..||..++++||...+||.
T Consensus 615 -----------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 615 -----------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred -----------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1222345779999999999999999999999886
No 281
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.2e-40 Score=278.72 Aligned_cols=248 Identities=22% Similarity=0.362 Sum_probs=202.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++.+. +++.+++|.+..... ....+.+|++++++++|+||+++++++...+..+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 478999999999999999999864 456899999865432 2345678999999999999999999999999999999
Q ss_pred eccc-ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-
Q 021299 91 EFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR- 167 (314)
Q Consensus 91 e~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~- 167 (314)
|++. ++|.+.+.... ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 9995 58888886543 46899999999999999999999999999999999999999999999999999876432211
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
......+..|+|||.+.+ ..++.++|+||||+++++|++ |..||...........+.......
T Consensus 161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 224 (261)
T cd05068 161 REGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP--------------- 224 (261)
T ss_pred cCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------
Confidence 111222356999998866 668999999999999999999 899998877666555543321110
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 225 ------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 225 ------------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ------------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 11235789999999999999999999999874
No 282
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-42 Score=303.61 Aligned_cols=256 Identities=26% Similarity=0.431 Sum_probs=215.4
Q ss_pred hhc-cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC--cchhhHHHHHHHhhcCCCCeeeeeceeccCCe--E
Q 021299 12 DRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTALREIKLLKELKSPHIIELIDAFPHKGN--L 86 (314)
Q Consensus 12 ~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~ 86 (314)
++| +....||+|+|.+||+|.|..+|..||--.++....... ...++..|+++|+.|+|+||++++++|.+... +
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 455 556789999999999999999998888766555443333 33678899999999999999999999976554 7
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCceEEecC-CcEEEeeccceeeeC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSH-GQLKLADFGLARIFG 162 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--i~H~di~~~nil~~~~-~~~~l~df~~~~~~~ 162 (314)
-+|+|.+. |+|..++++.+ .++...+..|++||+.||.|||++. |+|||||-+||||+.+ |.|||+|+|+|+...
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred eeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 78999998 68888887665 4889999999999999999999985 9999999999999876 899999999999874
Q ss_pred CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCcc-CCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL-QGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.. .....+|||.|||||.+.. .|+...||||||++|+||+|+..|+ ...++.++++++..+..+......
T Consensus 198 ~s--~aksvIGTPEFMAPEmYEE--~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV----- 268 (632)
T KOG0584|consen 198 KS--HAKSVIGTPEFMAPEMYEE--NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV----- 268 (632)
T ss_pred cc--ccceeccCccccChHHHhh--hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc-----
Confidence 43 3445899999999998864 7899999999999999999999888 457788888888777544333322
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
-.+++++||.+||.. .+.|||+.|+|.||||..-.+
T Consensus 269 ---------------------~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 269 ---------------------KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred ---------------------CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 278999999999999 999999999999999998644
No 283
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-40 Score=291.96 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=197.5
Q ss_pred HhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceec-cC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP-HK 83 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~-~~ 83 (314)
.++|++.+.||+|+||.||+|.+.. +++.|++|.+...... .....+.+|+.+++++ +|+||+++++++. .+
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 4799999999999999999996433 3578999998643321 2223456899999999 7999999999775 44
Q ss_pred CeEEEEEecccc-cHHHHHHhCC---------------------------------------------------------
Q 021299 84 GNLHLVFEFMET-DLETVIRNTN--------------------------------------------------------- 105 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~--------------------------------------------------------- 105 (314)
...++++||++| +|.+.+....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 578899999985 7877775421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--cccccccCccccCc
Q 021299 106 ---IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAP 180 (314)
Q Consensus 106 ---~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sP 180 (314)
..+++..+..++.||+.||+|||++|++|+||||.||+++.++.++|+|||++........ ......++..|+||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 2578899999999999999999999999999999999999999999999999976532211 12223446679999
Q ss_pred ccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCcc
Q 021299 181 ELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSL 259 (314)
Q Consensus 181 E~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (314)
|.+.+ ..++.++||||||+++|+|++ |..||......+........... . ..
T Consensus 245 E~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~-----------------------~~ 297 (337)
T cd05054 245 ESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR---M-----------------------RA 297 (337)
T ss_pred HHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC---C-----------------------CC
Confidence 99877 678999999999999999997 99999775544433332221000 0 01
Q ss_pred CCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 260 FPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 260 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++++.+++.+||+.+|++||+++|+++|
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12357899999999999999999999999875
No 284
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.1e-40 Score=278.97 Aligned_cols=248 Identities=22% Similarity=0.371 Sum_probs=202.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..++|++.+.||+|++|.||+|.. .+++.+++|.+...... ...+.+|+.++++++|+|++++++++. .+..+++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII 78 (260)
T ss_pred chHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence 468999999999999999999985 45678999998754332 235678999999999999999999874 4568999
Q ss_pred Eeccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-
Q 021299 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~- 166 (314)
||++. |+|.+.+... +..+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 99997 4888887654 45689999999999999999999999999999999999999999999999999976542221
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
......++..|+|||.+.. ..++.++|+||||+++|++++ |.+||......+....+........
T Consensus 159 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 224 (260)
T cd05067 159 AREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPR------------- 224 (260)
T ss_pred cccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCC-------------
Confidence 1223345667999998876 567899999999999999998 9999988776666555533221111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+.++.+++.+||..+|++||+++++++
T Consensus 225 --------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 225 --------------PDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1234789999999999999999999999874
No 285
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.8e-40 Score=287.75 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=197.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcE--EEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQT--VAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~--~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|++.+.||+|+||.||+|.++.++.. +++|.+.... .......+.+|+.++.++ +|+||+++++++..++..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 36899999999999999999998877764 4666654322 122234566899999999 8999999999999999999
Q ss_pred EEEeccc-ccHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 88 LVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
+++||++ |+|.+++.... ..+++..+..++.|++.|++|||++|++|+||||+||+++.++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence 9999998 48888886432 2578999999999999999999999999999999999999999999
Q ss_pred EeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCC
Q 021299 152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230 (314)
Q Consensus 152 l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~ 230 (314)
|+|||++...... .......++..|+|||.+.+ ..++.++||||||+++++|++ |..||......+....+....
T Consensus 165 l~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-- 240 (303)
T cd05088 165 IADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-- 240 (303)
T ss_pred eCccccCcccchh-hhcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC--
Confidence 9999998632111 11111223556999998866 567899999999999999998 999997766555444332110
Q ss_pred CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.. .....+++++.+|+.+||+.+|++||++++++.+
T Consensus 241 --~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 241 --RL-----------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred --cC-----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0012357889999999999999999999999876
No 286
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-41 Score=299.15 Aligned_cols=260 Identities=24% Similarity=0.391 Sum_probs=229.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+.|.+.+.||+|.|++|.++.+..+|..||+|.+.+...+.....+..+|+++++.++||||++++.+.+.+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 46799999999999999999999999999999999998887777677889999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccc
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFT 169 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 169 (314)
||+.| .+.+++.+.+ .+.+..+..++.|+++|++|||+++|+|+|||++||+++.+.++||+|||++..+. ......
T Consensus 135 eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~~~~lq 212 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-YGLMLQ 212 (596)
T ss_pred EeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-cccccc
Confidence 99985 7888887665 46779999999999999999999999999999999999999999999999999885 555667
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
...|++.|.|||++.+..+..++.|+||||+++|.|+.|..||.+..-.+...+...+....
T Consensus 213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rI------------------ 274 (596)
T KOG0586|consen 213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRI------------------ 274 (596)
T ss_pred ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecc------------------
Confidence 78899999999999997778999999999999999999999999876665555543331111
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
.-.++.+..+||+++|-.+|++|++++++.+|.|.+-..+.
T Consensus 275 ----------p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 275 ----------PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred ----------cceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 11358889999999999999999999999999999876544
No 287
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4e-40 Score=278.64 Aligned_cols=245 Identities=29% Similarity=0.472 Sum_probs=205.4
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc-ccH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDL 97 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~-g~l 97 (314)
||.|++|.||.+.+..+++.+++|.+........ ....+..|+.+++.++|+|++++++.++.++..+++||++. ++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6899999999999988899999999877643322 33456689999999999999999999999999999999995 588
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccc
Q 021299 98 ETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (314)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y 177 (314)
.+.+.... .+++..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||.+..............++..|
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY 159 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence 88876554 58999999999999999999999999999999999999999999999999998765443334455677789
Q ss_pred cCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCC
Q 021299 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (314)
Q Consensus 178 ~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (314)
+|||...+ ...+.++|+||||+++|++++|..||...+.......+... ..
T Consensus 160 ~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~----------------------- 210 (250)
T cd05123 160 LAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD-----PL----------------------- 210 (250)
T ss_pred cChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-----CC-----------------------
Confidence 99998876 55788999999999999999999999877664444444321 00
Q ss_pred ccCCCCCHHHHHHHhhhcccCCCCCCCH---HHHhcCccc
Q 021299 258 SLFPSASDDALDLLSKMFTYDPKARITA---QQALEHRFA 294 (314)
Q Consensus 258 ~~~~~~~~~~~~li~~~l~~dp~~Rps~---~ell~h~~~ 294 (314)
+....++..+.+++++||+.||++||++ +++++||||
T Consensus 211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 1122348899999999999999999999 999999998
No 288
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1e-39 Score=278.31 Aligned_cols=247 Identities=23% Similarity=0.385 Sum_probs=199.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||++.+..+ ..+++|.+..... ....+.+|++++++++|+||+++++.+.+ ...+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 47899999999999999999987655 4699999875332 22356789999999999999999998754 5679999
Q ss_pred ecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||+++ ++.+++... ...+++..+..++.|++.||++||+.+++|+||+|+||+++.++.++|+|||.+..........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 99985 888888754 3458999999999999999999999999999999999999999999999999997664332211
Q ss_pred -cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 169 -THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 169 -~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
....++..|+|||...+ ..++.++|+||||+++|+|++ |..||...........+......
T Consensus 160 ~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------------- 222 (262)
T ss_pred ccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC----------------
Confidence 23345667999998865 567999999999999999999 78899877666555443322100
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++..+.+++.+||..||++||+++++++
T Consensus 223 -----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 223 -----------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011245889999999999999999999999864
No 289
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-41 Score=317.73 Aligned_cols=259 Identities=29% Similarity=0.453 Sum_probs=207.4
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-------
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------- 82 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 82 (314)
...+|+.++.||+|+||.||+|+.+-+|..||||++.... ......++.+|+..+.+++||||++++..|.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4578899999999999999999999999999999998876 55566678899999999999999999988732
Q ss_pred --------------------------------------------------------------------------------
Q 021299 83 -------------------------------------------------------------------------------- 82 (314)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (314)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEecccccHHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHh
Q 021299 83 ------------------------K--------GNLHLVFEFMETDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHK 129 (314)
Q Consensus 83 ------------------------~--------~~~~iv~e~~~g~l~~~~~~~~~~l-~~~~~~~i~~~i~~~l~~Lh~ 129 (314)
+ ...||.||||+.+++..+-..+... ....+|.++++|+.||+|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 1258899999987777776665544 467899999999999999999
Q ss_pred CCcccCCCCCCceEEecCCcEEEeeccceeee------------------CCCCCcccccccCccccCcccccCcc--CC
Q 021299 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARIF------------------GSPDRRFTHQVFARWYRAPELLFGAK--QY 189 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~~------------------~~~~~~~~~~~~~~~y~sPE~~~~~~--~~ 189 (314)
.|++||||||.|||+++++.|||+|||+++.. +......+..+||..|+|||++.+.. .|
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 99999999999999999999999999999872 11122345668899999999997755 69
Q ss_pred CCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHH
Q 021299 190 GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALD 269 (314)
Q Consensus 190 ~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (314)
+.|.|+||||++|+||+.- .-...+....+..+..+..+.+ ..++.+--+.-..
T Consensus 796 n~KiDmYSLGIVlFEM~yP--F~TsMERa~iL~~LR~g~iP~~------------------------~~f~~~~~~~e~s 849 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLYP--FGTSMERASILTNLRKGSIPEP------------------------ADFFDPEHPEEAS 849 (1351)
T ss_pred cchhhhHHHHHHHHHHhcc--CCchHHHHHHHHhcccCCCCCC------------------------cccccccchHHHH
Confidence 9999999999999999943 2233444444444442211111 1111222456789
Q ss_pred HHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 270 LLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 270 li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
+|+.||+.||++||||.|+|.+.||-
T Consensus 850 lI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 850 LIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHhcCCCccCCCHHHHhhccCCC
Confidence 99999999999999999999999998
No 290
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.4e-40 Score=279.81 Aligned_cols=242 Identities=22% Similarity=0.366 Sum_probs=194.4
Q ss_pred eeCccccceEEEEEE--CCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 19 VLGEGTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~--~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
.||+|++|.||++.+ ..++..+++|.+............+.+|+.+++.+.|+||++++++++ ....+++|||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 456789999998765544444556778999999999999999999875 4567899999995
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc---cccc
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQV 172 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~ 172 (314)
+|.+.+... ..+++..+..++.|++.|+++||++|++|+||||.||+++.++.++|+|||.+.......... ....
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK 159 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence 677777644 468999999999999999999999999999999999999999999999999997664332211 1222
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...........+..... .
T Consensus 160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~----~----------------- 217 (257)
T cd05116 160 WPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER----M----------------- 217 (257)
T ss_pred CCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----C-----------------
Confidence 3467999998865 567899999999999999997 9999988766655555432211 0
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+....+++++.++|.+||+.||++||++.+|..
T Consensus 218 ------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 ------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred ------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 112246899999999999999999999999864
No 291
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-40 Score=285.91 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=197.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCc--EEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i 88 (314)
++|++.+.||+|++|.||++..+.++. .+++|.+...... .....+.+|++++.++ +||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE-NDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH-HHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 579999999999999999998877665 4677777532221 1223566899999999 79999999999999999999
Q ss_pred EEeccc-ccHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEE
Q 021299 89 VFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL 152 (314)
Q Consensus 89 v~e~~~-g~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l 152 (314)
++||++ |+|.+.+.... ..+++..++.++.|++.||++||++|++|+||||+||+++.++.++|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence 999998 58888886532 35888999999999999999999999999999999999999999999
Q ss_pred eeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCC
Q 021299 153 ADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTA 231 (314)
Q Consensus 153 ~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~ 231 (314)
+|||++....... .......+..|+|||.+.+ ..++.++||||||+++|+|++ |..||...........+......
T Consensus 161 ~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~- 237 (297)
T cd05089 161 ADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM- 237 (297)
T ss_pred CCcCCCcccccee-ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-
Confidence 9999986422111 1111222456999998866 567899999999999999997 99999877665555443222111
Q ss_pred CCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 232 TPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++++.+|+.+||+.+|.+||+++++++.
T Consensus 238 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 238 --------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred --------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112458899999999999999999999999755
No 292
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.1e-39 Score=277.81 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=204.4
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..++|++.+.||+|++|.||++..+ ++..+++|.+..... ....+.+|+.+++.++|+|++++++++......+++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence 3589999999999999999999865 457899999875432 234577899999999999999999999888899999
Q ss_pred Eecccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
||++.+ +|.+.+.... ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 999985 8888887653 46899999999999999999999999999999999999999999999999999766432111
Q ss_pred -ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 -FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 -~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
......+..|+|||.+.+ ..++.++|+||||+++++|++ |..||...........+........
T Consensus 160 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 225 (261)
T cd05034 160 AREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPR------------- 225 (261)
T ss_pred hhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-------------
Confidence 112223456999998876 668899999999999999998 9999988776666665544321111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+.++.+++.+||+.+|.+||+++++++
T Consensus 226 --------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 226 --------------PPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred --------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1234788999999999999999999999873
No 293
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7e-40 Score=280.72 Aligned_cols=250 Identities=22% Similarity=0.288 Sum_probs=198.0
Q ss_pred ccceeeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC------
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------ 84 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 84 (314)
|.+.+.||+|+||.||.+....+ +..+++|.+............+.+|+..++.++|+||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 57889999999999999987653 478999998765443333346678999999999999999999775444
Q ss_pred eEEEEEecccc-cHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 85 NLHLVFEFMET-DLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
..++++||+.+ +|...+... ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 37999999985 777776432 235899999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCcc--cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCC
Q 021299 159 RIFGSPDRRF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (314)
Q Consensus 159 ~~~~~~~~~~--~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
.......... .....+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----- 234 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL----- 234 (273)
T ss_pred eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-----
Confidence 8654322111 11223567999998865 668999999999999999998 88999877666555444332111
Q ss_pred CCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++++.+++.+||..||++|||+.+++++
T Consensus 235 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 235 ----------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ----------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1122458899999999999999999999999864
No 294
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.6e-40 Score=313.45 Aligned_cols=254 Identities=24% Similarity=0.323 Sum_probs=200.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc-CcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE-GVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++|++.+.||+|++|.||+|.+..+|+.|++|++....... .....+.+|+++++.++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999997543222 22345678999999999999999999999999999999
Q ss_pred ecccc-cHHHHHHhC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 91 EFMET-DLETVIRNT----------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 91 e~~~g-~l~~~~~~~----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
||++| +|.+.+... ....+...+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 99986 787777532 1235667788999999999999999999999999999999999999999999997
Q ss_pred eeCCCC------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHH
Q 021299 160 IFGSPD------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQL 221 (314)
Q Consensus 160 ~~~~~~------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~ 221 (314)
...... .......|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||.........
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 652111 01112468999999999876 66799999999999999999999999764432221
Q ss_pred HHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 222 GKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
... ....+... .-...+++.+.+++.+||..||++||+..+.+.+
T Consensus 241 ~~~----~i~~P~~~---------------------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 241 YRD----VILSPIEV---------------------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhh----hccChhhc---------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 110 00001000 0012568899999999999999999887665533
No 295
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.9e-40 Score=280.59 Aligned_cols=251 Identities=21% Similarity=0.335 Sum_probs=203.4
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc---EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~---~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|++.+.||+|++|.||++.+..++. .+++|.+...... .....+.+|+.++++++||||+++.+++..++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 4689999999999999999998765443 7999988654322 22345678999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|||++| +|.+++....+.+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 99999985 88888877666789999999999999999999999999999999999999999999999999976543221
Q ss_pred cc---cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 167 RF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 167 ~~---~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. ....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+...... +
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~--~--------- 229 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL--P--------- 229 (267)
T ss_pred eeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC--C---------
Confidence 11 11222456999999876 568999999999999999886 99999877666555554332110 0
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+++.+.+++.+||+.+|++||++.++++
T Consensus 230 ----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 230 ----------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ----------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 01235889999999999999999999999874
No 296
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7.4e-40 Score=281.30 Aligned_cols=251 Identities=23% Similarity=0.355 Sum_probs=201.8
Q ss_pred HhhccceeeeCccccceEEEEEECCC-----CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|++.+.||+|++|.||++.++.. +..+++|.+...... .....+.+|+.+++.++|+||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM-RERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 57999999999999999999987643 378999998644321 222356689999999999999999999999999
Q ss_pred EEEEEeccc-ccHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeec
Q 021299 86 LHLVFEFME-TDLETVIRNTN---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADF 155 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~~---------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df 155 (314)
.+++|||++ |+|.+.+.... ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence 999999997 58888876432 24678899999999999999999999999999999999999999999999
Q ss_pred cceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCC
Q 021299 156 GLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTAT 232 (314)
Q Consensus 156 ~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~ 232 (314)
|.+........ ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---- 238 (277)
T cd05032 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG---- 238 (277)
T ss_pred ccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC----
Confidence 99875433221 1122345677999998866 568999999999999999998 889998776665554443111
Q ss_pred CCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.. ......+.++.+++.+||+.+|++|||+.++++
T Consensus 239 ~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 239 HL-----------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CC-----------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 011234889999999999999999999999975
No 297
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.5e-40 Score=281.08 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=199.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.++|++.+.||+|++|+||++.+..+|. .|++|.+..... ......+.+|+.+++.+.|+||+++.+++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 5789999999999999999998777666 478998864432 2223456689999999999999999998865 456
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++++++ |++.+.+....+.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 78999998 58888887766679999999999999999999999999999999999999999999999999998764322
Q ss_pred Cc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 RR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.. .....+++.|+|||.+.+ ..++.++||||||+++|+|++ |..||...........+.......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----------- 231 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP----------- 231 (279)
T ss_pred ceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC-----------
Confidence 21 112233567999999876 568899999999999999998 889987765554444332211100
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....+.++.+++.+||..||++||++.++++
T Consensus 232 ----------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 232 ----------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ----------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11235788999999999999999999999984
No 298
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.6e-39 Score=277.47 Aligned_cols=254 Identities=26% Similarity=0.469 Sum_probs=204.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc---cCcchhhHHHHHHHhhcCCCCeeeeeceecc--CCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK---EGVNFTALREIKLLKELKSPHIIELIDAFPH--KGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 86 (314)
.+|.+.+.||+|++|.||++.+..++..+++|.+...... ......+.+|+++++.++|+||+++++++.+ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4789999999999999999999999999999988643221 2223356689999999999999999998855 3568
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++|+++| +|.+.+.... .+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 899999986 7777776544 48899999999999999999999999999999999999999999999999997653211
Q ss_pred ---CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ---~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.......++..|+|||.+.+ ..++.++|+||||+++++|++|..||............. ......
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~-------- 228 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQPTKP-------- 228 (264)
T ss_pred ccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cCCCCC--------
Confidence 11123457788999999876 557899999999999999999999998765544433322 111111
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.....+++++.++|.+||. +|.+||++.++++|||.
T Consensus 229 ---------------~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 229 ---------------MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ---------------CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1223568999999999999 57999999999999984
No 299
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-41 Score=308.17 Aligned_cols=250 Identities=27% Similarity=0.400 Sum_probs=202.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeece-ec---cC---
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDA-FP---HK--- 83 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~-~~---~~--- 83 (314)
.++++.++|.+|+|+.||+|.+...|..||+|++... ++.......+|+.+++.|+ |+|||.+++. .. .+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 4678999999999999999999888899999999876 4445556779999999997 9999999993 21 11
Q ss_pred CeEEEEEeccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCceEEecCCcEEEeecccee
Q 021299 84 GNLHLVFEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 84 ~~~~iv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~--i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
-.+.++||||. |+|.+++..+ ...+++..+.+|+.|+++|+++||... |+|||||.+|||++.+|..||||||.++
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 25789999999 5999999754 334999999999999999999999987 9999999999999999999999999997
Q ss_pred eeCCCCCc---------ccccccCccccCccccc--CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhh
Q 021299 160 IFGSPDRR---------FTHQVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAF 228 (314)
Q Consensus 160 ~~~~~~~~---------~~~~~~~~~y~sPE~~~--~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~ 228 (314)
-....... ......|+.|.|||.+. ++...++|+|||+|||+||.|+....||.......++.- .
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng----~ 270 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNG----N 270 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEec----c
Confidence 54322211 11235688999999863 456789999999999999999999999987643332211 1
Q ss_pred CCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcc
Q 021299 229 GTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRF 293 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 293 (314)
...++ .+..+..+.+||+.||+.||++||++.|++++-+
T Consensus 271 Y~~P~--------------------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 271 YSFPP--------------------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred ccCCC--------------------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 11111 1345899999999999999999999999886543
No 300
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-39 Score=279.93 Aligned_cols=250 Identities=21% Similarity=0.290 Sum_probs=196.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.++|++.+.||+|++|+||++.+..++. .+++|.+..... .....++..++..++++.||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 4789999999999999999999877776 366676643211 1222345577888899999999999998754 456
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++|++. |+|.+.+....+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 78899987 69999988777779999999999999999999999999999999999999999999999999998653322
Q ss_pred C--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
. ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+... ...+ .
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~--~~~~--~------ 232 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG--ERLA--Q------ 232 (279)
T ss_pred cccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CcCC--C------
Confidence 1 2223345667999999876 568999999999999999998 99999876654433332211 0000 0
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+..+.+++.+|+..||++|||+.|+++
T Consensus 233 -----------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 233 -----------------PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1124678999999999999999999999876
No 301
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.2e-40 Score=282.03 Aligned_cols=251 Identities=20% Similarity=0.316 Sum_probs=200.0
Q ss_pred hhccceeeeCccccceEEEEEEC----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDT----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
++|++.+.||+|+||+||++... .++..+++|.+...... .....+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 67899999999999999999742 35578999998754322 22235668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcE
Q 021299 88 LVFEFMET-DLETVIRNTN----------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~ 150 (314)
++|||+++ +|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence 99999985 8888775321 247888899999999999999999999999999999999999999
Q ss_pred EEeeccceeeeCCCC--CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHh
Q 021299 151 KLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (314)
Q Consensus 151 ~l~df~~~~~~~~~~--~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~ 227 (314)
+|+|||++....... .......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+...
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999997653322 11222334567999998876 567999999999999999998 88899776554444433221
Q ss_pred hCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.. . +....+++.+.+++.+||+.||.+||++.+|+++
T Consensus 243 ~~----~-----------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 243 QL----L-----------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred Cc----C-----------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 10 0 1112458899999999999999999999998764
No 302
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.1e-40 Score=283.79 Aligned_cols=252 Identities=26% Similarity=0.385 Sum_probs=202.1
Q ss_pred HhhccceeeeCccccceEEEEEECCC-----CcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~ 84 (314)
.++|++.+.||+|++|.||++.+... ...+++|.+...... .....+.+|+.+++.+ +|+||+++++++..++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 57899999999999999999987643 367999988754322 2223566899999999 7999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC
Q 021299 85 NLHLVFEFMET-DLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~ 148 (314)
..+++|||+.+ +|..++... ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~ 169 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH 169 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC
Confidence 99999999975 888887532 34688999999999999999999999999999999999999999
Q ss_pred cEEEeeccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHH
Q 021299 149 QLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF 225 (314)
Q Consensus 149 ~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~ 225 (314)
.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+.
T Consensus 170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 248 (293)
T cd05053 170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 248 (293)
T ss_pred eEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999765432211 112233566999998866 667899999999999999997 889998776655555443
Q ss_pred HhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
...... .....+..+.+|+.+||+.||.+|||+.+++++
T Consensus 249 ~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 249 EGYRME---------------------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred cCCcCC---------------------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 221110 112357899999999999999999999999875
No 303
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.4e-40 Score=282.65 Aligned_cols=261 Identities=25% Similarity=0.402 Sum_probs=207.1
Q ss_pred hccceeeeCccccceEEEEEEC---CCCcEEEEEEeecCCccc--CcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKE--GVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 86 (314)
.|++.+.||.|++|.||++.+. .+|..+++|.+....... .....+.+|+++++.+ +|++|+++.+.++.+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999874 368899999987543221 2223456799999999 589999999999999999
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++||++| +|.+.+... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 999999996 787777654 458899999999999999999999999999999999999999999999999987653322
Q ss_pred -CcccccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 166 -RRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 166 -~~~~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
.......++..|+|||.+... ..++.++|+||||+++|+|++|..||...........+........+
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 229 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---------- 229 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC----------
Confidence 112234577889999998653 34678999999999999999999999754433333333222111111
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCC-----CHHHHhcCccccccC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARI-----TAQQALEHRFAKSFN 298 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~h~~~~~~~ 298 (314)
.....+++.+.+++.+||+.||++|| ++++++.||||+.++
T Consensus 230 --------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 230 --------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred --------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 01123588999999999999999997 899999999999886
No 304
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.7e-40 Score=285.52 Aligned_cols=252 Identities=25% Similarity=0.362 Sum_probs=199.9
Q ss_pred HhhccceeeeCccccceEEEEEECC-------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 82 (314)
.++|.+.+.||+|+||.||.+++.. ++..+++|.+..... ......+.+|+.+++.+ +|+||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 5899999999999999999997643 234699999875432 22234566899999999 79999999999999
Q ss_pred CCeEEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec
Q 021299 83 KGNLHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~ 146 (314)
++..+++|||+++ +|.+++.... ..+++..+..++.|++.||+|||++|++|+||||+||+++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 175 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence 9999999999985 8888887542 24788999999999999999999999999999999999999
Q ss_pred CCcEEEeeccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHH
Q 021299 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (314)
Q Consensus 147 ~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~ 223 (314)
++.++|+|||.+......... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~ 254 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 999999999998755322111 111223467999998876 567899999999999999998 7888877655444443
Q ss_pred HHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
+.... .. .....++.++.+|+.+||..+|++|||+.+++++
T Consensus 255 ~~~~~----~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 255 LKEGH----RM-----------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcCC----CC-----------------------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 32211 00 1112458899999999999999999999999864
No 305
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.7e-39 Score=275.88 Aligned_cols=244 Identities=21% Similarity=0.336 Sum_probs=201.6
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||.|++|.||++... |+.+++|.+..... ....+.+|+.+++.++|+||+++++++.+....+++|
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 468999999999999999999754 78999999975533 3346778999999999999999999998889999999
Q ss_pred ecccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|++++ +|.+++.... ..+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 99985 8888887554 3689999999999999999999999999999999999999999999999999976532221
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....+..|+|||.+.. ..++.++|+||||+++++|++ |..||......+....+......
T Consensus 158 -~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 218 (256)
T cd05039 158 -SGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM----------------- 218 (256)
T ss_pred -cCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-----------------
Confidence 2234556999998876 567889999999999999997 99999877655544433322110
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......++.+.++|.+||..+|++||++++++.
T Consensus 219 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 219 ----------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred ----------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 011245889999999999999999999999875
No 306
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.1e-39 Score=276.30 Aligned_cols=243 Identities=24% Similarity=0.377 Sum_probs=197.4
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-c
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-D 96 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~ 96 (314)
+.||.|++|.||++.+.. ++.+++|.+...... .....+.+|+++++.++|+||+++++++......++++|++.| +
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 478999999999999877 899999988765433 2334677899999999999999999999999999999999975 7
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc--cccccC
Q 021299 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF--THQVFA 174 (314)
Q Consensus 97 l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~ 174 (314)
+.+++......++...+..++.+++.++.+||+++++|+||+|+||+++.++.++|+|||.+.......... .....+
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 888887666678999999999999999999999999999999999999999999999999997653221111 112224
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+.......
T Consensus 159 ~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~---------------------- 215 (251)
T cd05041 159 IKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP---------------------- 215 (251)
T ss_pred eccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC----------------------
Confidence 56999998866 568999999999999999998 788887766555444432221100
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....++.++.+++.+||..+|.+||++.|+++
T Consensus 216 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 216 -----APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -----CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 11235789999999999999999999999985
No 307
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.7e-39 Score=277.76 Aligned_cols=251 Identities=21% Similarity=0.348 Sum_probs=203.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc---EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~---~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|+..+.||+|++|.||++....++. .+++|.+...... .....+.+|++++++++|+|++++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH-HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 4688999999999999999999876554 7899988654321 12335668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|||+++ +|.+.+....+.+++..+..++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 99999986 78788776666799999999999999999999999999999999999999999999999999976533221
Q ss_pred ccc---ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 167 RFT---HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 167 ~~~---~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
... ....+..|+|||.+.. ..++.++|+||||+++|+|++ |..||...........+...... +.
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~--~~-------- 231 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRL--PA-------- 231 (268)
T ss_pred cceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCC--CC--------
Confidence 111 1122456999998876 567899999999999999997 99999877766665555432111 10
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+.++.+++.+||..+|++||+..++++
T Consensus 232 -----------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 232 -----------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 1135788999999999999999999999974
No 308
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.1e-39 Score=275.27 Aligned_cols=248 Identities=24% Similarity=0.383 Sum_probs=202.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.+|++.+.||+|++|.||++.+. ++..+++|.+...... ...+.+|++++++++||+++++++++......++++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 57899999999999999999875 4678999988644332 2356789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc-cc
Q 021299 92 FMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR-FT 169 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~ 169 (314)
|+.| +|.+.+....+.++++.++.++.|++.++++||+.+++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 9985 777777766667899999999999999999999999999999999999999999999999999765432211 12
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+........
T Consensus 160 ~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------- 222 (256)
T cd05112 160 GTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK---------------- 222 (256)
T ss_pred CCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC----------------
Confidence 2334567999998876 568899999999999999998 8999987766555555432211000
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++.+.+|+.+||..+|++||++.+++++
T Consensus 223 -----------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 223 -----------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 11247899999999999999999999999864
No 309
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-39 Score=279.30 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=196.2
Q ss_pred ccceeeeCccccceEEEEEECCCCc--EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc------CCe
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH------KGN 85 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~ 85 (314)
+.+.+.||+|++|.||++....++. .+++|.+............+..|+++++.++|+||+++++++.. ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3577899999999999998877665 68999887654444444566789999999999999999987532 125
Q ss_pred EEEEEeccc-ccHHHHHHh-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 86 LHLVFEFME-TDLETVIRN-----TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.++++||+. |+|.+.+.. ....+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+.
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 689999998 477776642 22358899999999999999999999999999999999999999999999999998
Q ss_pred eeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 160 IFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 160 ~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
........ .....+++.|++||.+.+ ..++.++|+||||+++|+|++ |..||...........+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~------ 233 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL------ 233 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC------
Confidence 65432211 112234567999999876 568999999999999999998 78999876665544443322110
Q ss_pred CCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....++..+.++|.+||+.||++|||+.+++++
T Consensus 234 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 234 ---------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0112457889999999999999999999999864
No 310
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=284.53 Aligned_cols=287 Identities=28% Similarity=0.487 Sum_probs=224.2
Q ss_pred cccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC--C----Ceeeeec
Q 021299 5 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--P----HIIELID 78 (314)
Q Consensus 5 ~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~----~i~~~~~ 78 (314)
..++.+.++|.+++.+|+|.||.|..+.+..++..+|+|+++.-..... ..+-|+++++++.+ | -++++.+
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYre---Aa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYRE---AALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhh---HHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 4577889999999999999999999999999999999999975443222 33468889999842 2 3677788
Q ss_pred eeccCCeEEEEEecccccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-----------
Q 021299 79 AFPHKGNLHLVFEFMETDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----------- 146 (314)
Q Consensus 79 ~~~~~~~~~iv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~----------- 146 (314)
+|+-.++.+||+|.++-++.+.+.+ ...+++...++.++.|++.++++||+.+++|-||||+||++..
T Consensus 159 wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 159 WFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred hhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCC
Confidence 8999999999999999999999986 4668999999999999999999999999999999999999842
Q ss_pred ---------CCcEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc
Q 021299 147 ---------HGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD 217 (314)
Q Consensus 147 ---------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~ 217 (314)
+..++|+|||.|+...... ...+.|.-|.|||++.+ ..++..+||||+||||+|+.+|...|...+.
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 2248999999998754433 44566777999999988 8899999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCCCCc-------------Ccccchh--hhccccCCCCCccCCCC---CHHHHHHHhhhcccCC
Q 021299 218 IDQLGKIFAAFGTATPSQWPDL-------------AYLPDYV--EYQYVAAPPLRSLFPSA---SDDALDLLSKMFTYDP 279 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp 279 (314)
.+.++.|....++.+..-.... ....... ..-...+.++....... ..++.+|+++||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 9988777666664332211111 0000000 11111122222222222 3348899999999999
Q ss_pred CCCCCHHHHhcCccccccC
Q 021299 280 KARITAQQALEHRFAKSFN 298 (314)
Q Consensus 280 ~~Rps~~ell~h~~~~~~~ 298 (314)
.+|+|+.|+|.||||+...
T Consensus 395 ~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 395 ARRITLREALSHPFFARLT 413 (415)
T ss_pred cccccHHHHhcCHHhhcCC
Confidence 9999999999999998654
No 311
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.3e-40 Score=281.97 Aligned_cols=251 Identities=21% Similarity=0.289 Sum_probs=201.2
Q ss_pred hhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.+|.+.+.||+|++|.||++.+.. .+..+++|.+...... .....+.+|+.++..++||||+++++++......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG-PLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 568999999999999999998654 3568999998754322 2233566899999999999999999999999999
Q ss_pred EEEEecccc-cHHHHHHhC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcE
Q 021299 87 HLVFEFMET-DLETVIRNT---------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~ 150 (314)
++++||+.+ ++..++... ...+++..+..++.|++.||.+||++|++|+||||+||+++.++.+
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCce
Confidence 999999985 777776422 2347888899999999999999999999999999999999999999
Q ss_pred EEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHh
Q 021299 151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (314)
Q Consensus 151 ~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~ 227 (314)
+|+|||++........ ......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+...
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR 242 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999876532221 1123345678999999876 557899999999999999998 78898877766665555433
Q ss_pred hCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.... ....++.++.+++.+||+.+|++||++++|+..
T Consensus 243 ~~~~---------------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 243 QVLP---------------------------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CcCC---------------------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 2111 122458899999999999999999999999863
No 312
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.8e-39 Score=275.93 Aligned_cols=242 Identities=21% Similarity=0.340 Sum_probs=194.0
Q ss_pred eeeCccccceEEEEEECCCC---cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTG---QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~---~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
+.||+|++|.||+|.....+ ..+++|.+...... .....+.+|+++++.++|+|++++++++. ....+++|||+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 47999999999999765544 78999998765443 23345678999999999999999999875 456799999998
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc---
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH--- 170 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~--- 170 (314)
+ +|.+.+.... .+++..+..++.|++.|+++||+.+++|+||+|+||+++.++.++|+|||.+............
T Consensus 79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 5 8888887554 6899999999999999999999999999999999999999999999999999866443322111
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQ 249 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
..++..|+|||.+.+ ..++.++|+||||+++|+|++ |.+||......+....+......
T Consensus 158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------- 217 (257)
T cd05060 158 GRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL------------------- 217 (257)
T ss_pred ccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC-------------------
Confidence 122456999998866 568999999999999999997 99999877665554444322110
Q ss_pred cccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 250 YVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++..+.++|.+||..+|++||++.+++.
T Consensus 218 --------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 218 --------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 111245789999999999999999999999874
No 313
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.8e-39 Score=274.54 Aligned_cols=247 Identities=23% Similarity=0.375 Sum_probs=198.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|.+.+.||+|++|.||++.+..+ ..+++|.+..... ....+.+|+++++.++|++++++++++.. +..+++|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEE
Confidence 47899999999999999999987554 4689998764332 23456789999999999999999998754 5678999
Q ss_pred ecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-c
Q 021299 91 EFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-R 167 (314)
Q Consensus 91 e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~ 167 (314)
||+.+ +|.+++... ...+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 99985 888888754 34588999999999999999999999999999999999999999999999999976533221 1
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....++..|+|||...+ ..++.++|+||||+++|+|++ |..||......+....+......
T Consensus 160 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (260)
T cd05069 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM---------------- 222 (260)
T ss_pred cCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 122345567999998866 568899999999999999999 88999877666555444332110
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......+..+.+++.+||..||++||+++++++
T Consensus 223 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 223 -----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011245889999999999999999999999874
No 314
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.6e-39 Score=281.44 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=200.1
Q ss_pred HhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
..+|.+.+.||+|++|.||++.+.. ++..+++|.+..... .....+.+|++.+++++|+||+++.+++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 3579999999999999999997543 345688888754332 122356689999999999999999999999999
Q ss_pred EEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc
Q 021299 86 LHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~ 149 (314)
.++||||++| +|.+++.... +.+++..++.++.||+.|+++||++|++|+||||+||+++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 9999999975 8888876432 34889999999999999999999999999999999999999999
Q ss_pred EEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHH
Q 021299 150 LKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA 226 (314)
Q Consensus 150 ~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~ 226 (314)
++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........+..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 240 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 240 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence 99999999976533221 1223445678999998876 668899999999999999998 9999977766655444322
Q ss_pred hhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 227 AFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.... . .....+..+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~----~-----------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 241 GRVL----E-----------------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCCC----C-----------------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 2110 0 01234788999999999999999999999864
No 315
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.8e-39 Score=279.56 Aligned_cols=250 Identities=20% Similarity=0.334 Sum_probs=200.1
Q ss_pred HhhccceeeeCccccceEEEEEEC-----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
..+|...+.||+|++|.||++... .++..+++|.+.... ......+.+|++.++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 468899999999999999999642 345678888876432 2223456789999999999999999999999999
Q ss_pred EEEEEecccc-cHHHHHHhCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcE
Q 021299 86 LHLVFEFMET-DLETVIRNTN--------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQL 150 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~--------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~ 150 (314)
.+++|||+.+ +|.+++.... ..+++..+..++.|++.|++|||++|++|+||+|+||+++.++.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence 9999999985 8888876543 247889999999999999999999999999999999999999999
Q ss_pred EEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHh
Q 021299 151 KLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAA 227 (314)
Q Consensus 151 ~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~ 227 (314)
+|+|||.+........ ......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |.+||......+....+...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence 9999999976532221 1122234567999998876 568999999999999999998 88999776666555444322
Q ss_pred hCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.... ....+++.+.+++.+||+.||++||++++|++
T Consensus 241 ~~~~---------------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 241 RELE---------------------------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred ccCC---------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1110 11245889999999999999999999999874
No 316
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.6e-39 Score=280.63 Aligned_cols=258 Identities=24% Similarity=0.310 Sum_probs=203.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCC----------------cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTG----------------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~----------------~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 74 (314)
.++|++++.||+|+||.||++.+...+ ..+++|.+...... .....+.+|+++++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCCCEe
Confidence 468999999999999999999866533 45799988755332 2234566899999999999999
Q ss_pred eeeceeccCCeEEEEEecccc-cHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceE
Q 021299 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (314)
Q Consensus 75 ~~~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil 143 (314)
++++++..++..++++|++.+ +|..++.... ..+++..++.++.|++.||++||++|++|+||||+||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 999999998999999999985 7887776543 25899999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccceeeeCCCC--CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh--CCCccCCCCcHH
Q 021299 144 IGSHGQLKLADFGLARIFGSPD--RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID 219 (314)
Q Consensus 144 ~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~--g~~pf~~~~~~~ 219 (314)
++.++.++|+|||.+....... .......+++.|+|||.+.+ ..++.++||||||+++|+|++ +..||......+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence 9999999999999987653322 11223445677999998876 568999999999999999998 668887766666
Q ss_pred HHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
........+....... .......++.++.+++.+||+.||++|||+.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 242 VIENAGHFFRDDGRQI--------------------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHhccccccccc--------------------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 5555443321111000 00112245789999999999999999999999964
No 317
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.3e-39 Score=280.82 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=202.1
Q ss_pred HHHhhccceeeeCccccceEEEEEE-----CCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAID-----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 82 (314)
...++|.+.+.||+|++|.||++.+ ...+..+++|.+..... ......+.+|+++++++ +|+||+++++++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 3468999999999999999999975 23455799998865432 22234567899999999 79999999999999
Q ss_pred CCeEEEEEeccc-ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 83 KGNLHLVFEFME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 83 ~~~~~iv~e~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
.+..+++|||+. |+|.+++.... ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||.+..
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999998 58888887543 3489999999999999999999999999999999999999999999999999975
Q ss_pred eCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 161 FGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 161 ~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
...... ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||................ ...
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~--- 263 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG---YRM--- 263 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC---CcC---
Confidence 533221 1112334677999998876 567899999999999999998 899987766555443333211 000
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......++++.+++.+||..+|++|||+.|++.
T Consensus 264 --------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 264 --------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred --------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 011234789999999999999999999999975
No 318
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.1e-39 Score=277.38 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=202.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc---EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~---~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.+.|++.+.||+|++|.||++..+.+++ .+++|.+.... .......+..|+.+++.++||||+++.+++.++...+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 3568999999999999999999877664 59999986532 2223346778999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|||++| +|.+++....+.+++..++.++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 99999986 78778776666789999999999999999999999999999999999999999999999999875432211
Q ss_pred c--ccccc---cCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 167 R--FTHQV---FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 167 ~--~~~~~---~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
. ..... .+..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+.......
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~--------- 231 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP--------- 231 (269)
T ss_pred ccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC---------
Confidence 1 11111 1346999999866 567899999999999999886 999998776665555443221100
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....++..+.+++.+||..+|++||++++++.
T Consensus 232 ------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 232 ------------------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01245788999999999999999999999985
No 319
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.7e-39 Score=273.27 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=197.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeecee-ccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~~~~iv 89 (314)
.++|.+.+.||+|++|.||++... |..+++|.+.... ....+.+|+.+++.++|++++++++++ ..++..+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 368999999999999999999654 7789999885432 233567899999999999999999865 556678999
Q ss_pred Eecccc-cHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFMET-DLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~-~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
+||+++ +|.+++..... .+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 999985 88888876543 48899999999999999999999999999999999999999999999999987653322
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.....+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+..... .
T Consensus 157 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~------------ 218 (256)
T cd05082 157 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----M------------ 218 (256)
T ss_pred -CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC----C------------
Confidence 22233456999998866 567899999999999999997 8999877655554444432211 0
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...+.+++.+.+++.+||+.+|++|||+.++++
T Consensus 219 -----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 219 -----------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 112345889999999999999999999999975
No 320
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.2e-39 Score=274.58 Aligned_cols=242 Identities=21% Similarity=0.344 Sum_probs=192.5
Q ss_pred eeCccccceEEEEEEC--CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 19 VLGEGTYGVVYKAIDT--KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
.||+|++|.||++... ..+..+++|.+..... ......+.+|+.++++++|+||++++++++ ....++||||++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999765 3455799998865432 223345678999999999999999999875 4578999999985
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc---cccc
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF---THQV 172 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~ 172 (314)
+|.+.+......+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.+.......... ....
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK 159 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence 7888887666679999999999999999999999999999999999999999999999999997553332211 1122
Q ss_pred cCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 173 FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 173 ~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
++..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+..... ..
T Consensus 160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~---------------- 218 (257)
T cd05115 160 WPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR----LD---------------- 218 (257)
T ss_pred CCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----CC----------------
Confidence 2467999998876 567899999999999999996 9999987766655544433211 11
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++++.++|.+||..+|++||+..+|.+
T Consensus 219 -------~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 219 -------CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11245889999999999999999999999864
No 321
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.2e-39 Score=273.43 Aligned_cols=248 Identities=25% Similarity=0.404 Sum_probs=203.0
Q ss_pred ccceeeeCccccceEEEEEECCCC----cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTG----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+++.+.||.|++|.||++.+...+ ..+++|.+....... ....+.+|++.++.++|+||+++++.+.+.+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 457889999999999999988766 889999986543221 334667899999999999999999999998999999
Q ss_pred Eecccc-cHHHHHHhCCCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFMET-DLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~-l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
||+++| ++.+.+...... +++..+..++.|++.|+++||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 999985 888888765544 899999999999999999999999999999999999999999999999999876443221
Q ss_pred cc-ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 FT-HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 ~~-~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.. ...+++.|+|||.+.+ ..++.++|+||||+++++|++ |.+||...........+.......
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 224 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP-------------- 224 (258)
T ss_pred ccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC--------------
Confidence 11 2235678999998855 668999999999999999998 788888766666555543321110
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....+.++.+++.+||..||++|||+.|+++
T Consensus 225 -------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 225 -------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 11235889999999999999999999999985
No 322
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.3e-39 Score=279.99 Aligned_cols=258 Identities=25% Similarity=0.329 Sum_probs=199.7
Q ss_pred HhhccceeeeCccccceEEEEEECCC--------------CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeee
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT--------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL 76 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~--------------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 76 (314)
.++|++.+.||+|++|.||++.+..+ ...+++|.+..... ......+.+|+++++.++|+|++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 46899999999999999999976532 23589999875422 2223356789999999999999999
Q ss_pred eceeccCCeEEEEEecccc-cHHHHHHhCC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE
Q 021299 77 IDAFPHKGNLHLVFEFMET-DLETVIRNTN-----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI 144 (314)
Q Consensus 77 ~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~-----------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~ 144 (314)
++++...+..+++|||+.| +|.+.+.... ..+++..+..++.|++.||+|||++|++|+||||+||++
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 9999999999999999985 7877775431 236788899999999999999999999999999999999
Q ss_pred ecCCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh--CCCccCCCCcHHH
Q 021299 145 GSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDIDQ 220 (314)
Q Consensus 145 ~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~--g~~pf~~~~~~~~ 220 (314)
+.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++++|++ +..||........
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999999999875432211 1122334667999998876 568999999999999999988 5678877766665
Q ss_pred HHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
............... .....+..++.+.+|+.+||+.||++|||+++|++
T Consensus 242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 242 IENTGEFFRNQGRQI--------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHhhhhccccc--------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 554433221110000 00112235789999999999999999999999864
No 323
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.1e-39 Score=272.61 Aligned_cols=243 Identities=23% Similarity=0.387 Sum_probs=196.2
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-c
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-D 96 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~ 96 (314)
+.||+|++|.||++... ++..+++|.+...... .....+.+|+++++.++||||+++.+++...+..+++|||++| +
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQ-ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCH-HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 46899999999999854 6789999988654322 2223566899999999999999999999999999999999985 8
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc-cccccCc
Q 021299 97 LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF-THQVFAR 175 (314)
Q Consensus 97 l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~ 175 (314)
|.+++......+++..+..++.|++.+|.+||++|++|+||+|+||+++.++.++|+|||.+.......... ....++.
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 888887666678999999999999999999999999999999999999999999999999987543221111 1123345
Q ss_pred cccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC
Q 021299 176 WYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP 254 (314)
Q Consensus 176 ~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
.|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+......
T Consensus 159 ~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------ 213 (250)
T cd05085 159 KWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM------------------------ 213 (250)
T ss_pred cccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC------------------------
Confidence 6999999866 568899999999999999998 88999877666555444322110
Q ss_pred CCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 255 PLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 255 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++..+.+++.+||..+|++||++.++++
T Consensus 214 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 214 ---SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred ---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 111245889999999999999999999999975
No 324
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-39 Score=289.61 Aligned_cols=252 Identities=21% Similarity=0.321 Sum_probs=196.8
Q ss_pred HhhccceeeeCccccceEEEEEECCC-----CcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 84 (314)
.++|++.+.||+|+||.||++.+... +..|++|.+..... ......+.+|+++++++. ||||+++++++.+.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 46888999999999999999986432 34699999865432 222345778999999996 999999999999999
Q ss_pred eEEEEEecccc-cHHHHHHhCC----------------------------------------------------------
Q 021299 85 NLHLVFEFMET-DLETVIRNTN---------------------------------------------------------- 105 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~---------------------------------------------------------- 105 (314)
..++||||+.| +|.+++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999984 8877765321
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC
Q 021299 106 -------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148 (314)
Q Consensus 106 -------------------------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~ 148 (314)
..+++..+..++.|++.||+|||+.+++|+||||+||+++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence 2377788899999999999999999999999999999999999
Q ss_pred cEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHH
Q 021299 149 QLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIF 225 (314)
Q Consensus 149 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~ 225 (314)
.++|+|||.+........ ......+++.|+|||.+.+ ..++.++||||||+++|+|++ |..||.............
T Consensus 275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~ 353 (400)
T cd05105 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI 353 (400)
T ss_pred EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence 999999999976533221 1222345677999999876 667999999999999999997 888887654333322221
Q ss_pred HhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
... ... .....++.++.+++.+||+.||++||++.+|.+
T Consensus 354 ~~~---~~~-----------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 354 KSG---YRM-----------------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hcC---CCC-----------------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 110 000 011245889999999999999999999988765
No 325
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.3e-39 Score=281.68 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=199.3
Q ss_pred HhhccceeeeCccccceEEEEEECC-------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 82 (314)
.++|.+.+.||+|++|.||++.+.. ....+++|.+...... .....+.+|+++++.+ .||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD-KDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh-HHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 4799999999999999999997532 3457899987654322 2233566899999999 59999999999998
Q ss_pred CCeEEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec
Q 021299 83 KGNLHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~ 146 (314)
++..+++|||+.+ +|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 8999999999985 8888886532 34788899999999999999999999999999999999999
Q ss_pred CCcEEEeeccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHH
Q 021299 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (314)
Q Consensus 147 ~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~ 223 (314)
++.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999765322111 111223456999999876 668899999999999999998 8889987766555554
Q ss_pred HHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+...... .....++.++.+++.+||..+|++|||+.++++
T Consensus 249 ~~~~~~~---------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 249 LREGHRM---------------------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHcCCCC---------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 4322100 011245788999999999999999999999875
No 326
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.9e-39 Score=279.66 Aligned_cols=249 Identities=24% Similarity=0.388 Sum_probs=197.0
Q ss_pred hccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
+|++.+.||+|+||.||++.+.. ....+++|.+...... .....+.+|+.+++.++||||+++++.+..++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS-SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH-HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 47889999999999999998653 2246888877644322 12235668999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceE
Q 021299 88 LVFEFMET-DLETVIRNT-----------------------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~-----------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil 143 (314)
+++||+.+ +|.+++... ...+++..++.++.|++.||.+||+++++|+||+|+||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 99999984 787776532 124788999999999999999999999999999999999
Q ss_pred EecCCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHH
Q 021299 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ 220 (314)
Q Consensus 144 ~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~ 220 (314)
++.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++||||||+++++|++ |..||....+...
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 238 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 99999999999999975432221 1122334567999998866 668899999999999999998 9999987766655
Q ss_pred HHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
........... ....++.++.+++.+||+.+|++||+++++++
T Consensus 239 ~~~~~~~~~~~---------------------------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 239 FNLLKTGYRME---------------------------RPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHhCCCCCC---------------------------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 54433221110 11235789999999999999999999999874
No 327
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.9e-39 Score=277.20 Aligned_cols=264 Identities=22% Similarity=0.309 Sum_probs=195.1
Q ss_pred Hhhc-cceeeeCccccceEEEEE----ECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--C
Q 021299 11 ADRY-LKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--K 83 (314)
Q Consensus 11 ~~~y-~~~~~lg~g~~g~vy~~~----~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 83 (314)
.+|| ++.+.||+|++|+||++. ...++..+++|.+..... ......+.+|+++++.++||||+++.+++.. .
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 4677 999999999999998864 334677899999875432 1233456789999999999999999998754 4
Q ss_pred CeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
...+++|||+.+ +|.+.+... .+++..++.++.|++.|+.+||++|++|+||||+||+++.++.++|+|||.+....
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 468999999985 777777654 48999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCc---ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCc
Q 021299 163 SPDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (314)
Q Consensus 163 ~~~~~---~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
..... .....++..|+|||.+.+ ..++.++|+||||+++++|++|..||....... ..+..... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--~~~~~~~~----~~~~~~ 231 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--EEMIGPKQ----GQMTVV 231 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcchh--hhhhcccc----cccchh
Confidence 32211 112234566999998876 567899999999999999999998886543211 11111000 000000
Q ss_pred CcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...... ......+.....+.++.+++.+||..+|++|||++++++
T Consensus 232 ----~~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 232 ----RLIELL--ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ----hhhhhh--hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000 000011123456899999999999999999999999985
No 328
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.1e-39 Score=276.05 Aligned_cols=250 Identities=23% Similarity=0.375 Sum_probs=201.4
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.++|.+.+.||+|++|+||++..+.+|. .+++|.+..... ......+.+|+.+++.++|+|++++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 4789999999999999999998776654 588888765533 2223456689999999999999999998876 788
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++||+. |+|.+.+......+++..+..++.|++.|++|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999997 58888888776679999999999999999999999999999999999999999999999999997654322
Q ss_pred Ccc--cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 RRF--THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ~~~--~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
... ....++..|+|||.+.. ..++.++|+||||++++++++ |..||......+....+........
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 232 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQ---------- 232 (279)
T ss_pred cceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCC----------
Confidence 111 11223456999998865 667899999999999999998 9999988766555544432211100
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+..+.+++.+||..||.+||++.++++
T Consensus 233 -----------------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 233 -----------------PPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -----------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1124778999999999999999999998763
No 329
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-41 Score=286.56 Aligned_cols=264 Identities=27% Similarity=0.373 Sum_probs=219.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.+.|+..++||.|+||.||-++.+.+|+.||.|++.+.... .....-..+|-.++..++.+.||.+--.|+..+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 57789999999999999999999999999999998766432 22333456899999999999999999999999999999
Q ss_pred EecccccHHHHH-HhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 90 FEFMETDLETVI-RNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 90 ~e~~~g~l~~~~-~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
+..|+|+-+.+- .+. .+.+++..+.-++.+|+.||.+||..+|++||+||+|||+|+.|.++|+|+|+|..+......
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 999997444333 332 357999999999999999999999999999999999999999999999999999987544433
Q ss_pred ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 168 FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.+.+||..|||||++.+ ..|+...|.|||||++|+|+.|..||..........++-+...+.+. .+
T Consensus 344 -~~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~-ey----------- 409 (591)
T KOG0986|consen 344 -RGRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE-EY----------- 409 (591)
T ss_pred -ccccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh-hc-----------
Confidence 34489999999999988 45999999999999999999999999876655555444433322221 11
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccCcc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFNGV 300 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~~~ 300 (314)
....|+++++|.+.+|++||.+|.. +.++.+||||+.++=+
T Consensus 410 ------------~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 410 ------------SDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred ------------ccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 2346999999999999999999976 4689999999998733
No 330
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.1e-39 Score=278.41 Aligned_cols=258 Identities=24% Similarity=0.320 Sum_probs=198.4
Q ss_pred HhhccceeeeCccccceEEEEEECC----------------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK----------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~----------------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 74 (314)
.++|++.+.||+|++|.||++.+.. ++..+++|.+..... ......+.+|+++++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcc
Confidence 5789999999999999999985432 344689998865422 22234567899999999999999
Q ss_pred eeeceeccCCeEEEEEecccc-cHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceE
Q 021299 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTN----------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (314)
Q Consensus 75 ~~~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil 143 (314)
++++++..++..+++|||+.+ +|.+++.... ..+++..+..++.|++.|+++||++|++|+||||+||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 999999999999999999985 8888876532 23677889999999999999999999999999999999
Q ss_pred EecCCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh--CCCccCCCCcHH
Q 021299 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN--RRPFLQGSSDID 219 (314)
Q Consensus 144 ~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~--g~~pf~~~~~~~ 219 (314)
++.++.++|+|||.+........ ......++..|++||...+ ..++.++|+||||+++|+|++ |..||......+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999875532221 1122233567999998766 568999999999999999998 668887766555
Q ss_pred HHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 220 QLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
........+...... ...+....+++.+.+|+.+||+.||++||++.+|++
T Consensus 242 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 242 VIENTGEFFRDQGRQ--------------------VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHhhcccc--------------------ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 544332221110000 000111245789999999999999999999999864
No 331
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.4e-39 Score=279.78 Aligned_cols=253 Identities=24% Similarity=0.356 Sum_probs=201.3
Q ss_pred HHhhccceeeeCccccceEEEEEEC-------CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceec
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDT-------KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFP 81 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~-------~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~ 81 (314)
..++|.+.+.||+|++|.||.+++. ..+..+++|.+..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 3689999999999999999999742 2345789998864322 22234567899999999 7999999999999
Q ss_pred cCCeEEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEe
Q 021299 82 HKGNLHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIG 145 (314)
Q Consensus 82 ~~~~~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~ 145 (314)
.....+++|||+.+ +|.+++.... ..++...+..++.||+.||.|||++|++|+||||+||+++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 99999999999985 8888886532 2477888999999999999999999999999999999999
Q ss_pred cCCcEEEeeccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHH
Q 021299 146 SHGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLG 222 (314)
Q Consensus 146 ~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~ 222 (314)
.++.++|+|||.+......... .....+++.|+|||.+.+ ..++.++||||||+++|+|++ |..||......+...
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 250 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 9999999999999866432221 112234567999999876 568899999999999999998 778887776555554
Q ss_pred HHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 223 KIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.+...... .....++.++.+|+.+||..+|++|||+.++++.
T Consensus 251 ~~~~~~~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 251 LLKEGHRM---------------------------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHcCCcC---------------------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 44222100 0012458899999999999999999999999864
No 332
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5e-39 Score=277.83 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=200.0
Q ss_pred HhhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
.++|++.+.||+|++|.||++.+.. ++..+++|.+..... ......+.+|+.++++++|||++++.+++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 4789999999999999999998743 567899998864332 2223456789999999999999999999999899
Q ss_pred EEEEEecccc-cHHHHHHhCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceE
Q 021299 86 LHLVFEFMET-DLETVIRNTN---------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLL 143 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil 143 (314)
.++++||+++ +|.+++.... ..+++..++.++.|++.||.+||+++++|+||+|+||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 9999999985 8888886432 24778889999999999999999999999999999999
Q ss_pred EecCCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHH
Q 021299 144 IGSHGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQ 220 (314)
Q Consensus 144 ~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~ 220 (314)
++.++.++|+|||.+........ .......+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+.
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~ 241 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999876432211 1222334566999998866 568999999999999999997 7788876665555
Q ss_pred HHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 221 LGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
...+...... .....++.++.+|+.+||+.||.+|||++|++.
T Consensus 242 ~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 242 IYYVRDGNVL---------------------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHhcCCCC---------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 4443221100 011235789999999999999999999999864
No 333
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.9e-39 Score=273.70 Aligned_cols=251 Identities=24% Similarity=0.387 Sum_probs=200.8
Q ss_pred HhhccceeeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++|.+.+.||+|++|.||++.+... ...+++|....... ......+.+|+++++.+.||||+++++++.+ ...+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 46799999999999999999986543 34688998865432 2233466789999999999999999998865 4568
Q ss_pred EEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
++|||+. |+|.+++......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 9999998 488888876665689999999999999999999999999999999999999999999999999976533321
Q ss_pred c-ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 167 R-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~-~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
. .....++..|+|||.+.. ..++.++|+||||++++++++ |..||......+....+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-------------- 227 (270)
T cd05056 163 YKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-------------- 227 (270)
T ss_pred eecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------------
Confidence 1 112223456999998865 567899999999999999986 99999887766655544322111
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++++.++|.+|+..+|++|||+.+++..
T Consensus 228 -------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 228 -------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123458899999999999999999999998753
No 334
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.7e-39 Score=278.03 Aligned_cols=261 Identities=24% Similarity=0.396 Sum_probs=203.2
Q ss_pred hccceeeeCccccceEEEEEEC---CCCcEEEEEEeecCCcc--cCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQK--EGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 86 (314)
+|.+.+.||+|++|.||++.+. .++..+++|.+...... ......+.+|++++.++ +|++|+++.+.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999754 35678999998754321 12223456899999999 599999999999999999
Q ss_pred EEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++||||+.| +|.+.+... ..+++..+..++.|++.+|.+||+.+++|+||+|.||+++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 999999986 777776544 458899999999999999999999999999999999999999999999999987653322
Q ss_pred C-cccccccCccccCcccccCcc-CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 166 R-RFTHQVFARWYRAPELLFGAK-QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 166 ~-~~~~~~~~~~y~sPE~~~~~~-~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
. ......++..|++||.+.+.. ..+.++|+||||+++++|++|..||...........+........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 228 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK----------- 228 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-----------
Confidence 1 122235678899999986532 368899999999999999999999965432222222211111100
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcCccccccC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRFAKSFN 298 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h~~~~~~~ 298 (314)
......++..+.+++.+||+.||++||| +.++++||||+.++
T Consensus 229 -------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 229 -------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred -------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 0112245888999999999999999998 56789999999875
No 335
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.9e-39 Score=284.05 Aligned_cols=253 Identities=24% Similarity=0.381 Sum_probs=194.8
Q ss_pred HhhccceeeeCccccceEEEEEEC-----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc-C
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH-K 83 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~ 83 (314)
.++|++.+.||+|+||.||+|.+. .+++.|++|.++..... .....+.+|+.++.++ +|+||+++++++.. +
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 479999999999999999999743 45678999998754322 2233566899999999 68999999997754 4
Q ss_pred CeEEEEEecccc-cHHHHHHhCC---------------------------------------------------------
Q 021299 84 GNLHLVFEFMET-DLETVIRNTN--------------------------------------------------------- 105 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~--------------------------------------------------------- 105 (314)
...+++|||++| +|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 567899999985 8887775421
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--cccccccC
Q 021299 106 ---------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RFTHQVFA 174 (314)
Q Consensus 106 ---------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~ 174 (314)
..+++..+..++.|++.||+|||++|++|+||||.||+++.++.++|+|||.+........ ......++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence 2367788889999999999999999999999999999999999999999999876432211 11223345
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
..|+|||.+.+ ..++.++|+||||+++|+|++ |..||................ .....
T Consensus 245 ~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~----------------- 303 (343)
T cd05103 245 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG---TRMRA----------------- 303 (343)
T ss_pred cceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc---CCCCC-----------------
Confidence 67999999876 567899999999999999996 888987654433222221110 00000
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++++.+++.+||+.||.+|||+.+|++|
T Consensus 304 ------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 304 ------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 11247789999999999999999999999976
No 336
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.2e-39 Score=273.16 Aligned_cols=239 Identities=20% Similarity=0.286 Sum_probs=186.6
Q ss_pred eeeCccccceEEEEEECCC------------CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCe
Q 021299 18 EVLGEGTYGVVYKAIDTKT------------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN 85 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~------------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 85 (314)
+.||.|++|.||++..... ...+++|.+.... ......+.+++.+++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 4689999999999974321 2358888876532 2233356688999999999999999999988888
Q ss_pred EEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc-------EEEeeccc
Q 021299 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ-------LKLADFGL 157 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~-------~~l~df~~ 157 (314)
.+++|||+++ ++..++......+++..+..++.||+.||+|||++|++|+||+|+||+++.++. ++++|||.
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 9999999996 566666555667999999999999999999999999999999999999987664 89999998
Q ss_pred eeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
+...... ....++..|+|||.+.....++.++||||||+++|+|+ +|..||......+.. ..... ..
T Consensus 159 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~---~~---- 226 (262)
T cd05077 159 PITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEG---QC---- 226 (262)
T ss_pred CccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhc---Cc----
Confidence 8654321 23456778999998875567899999999999999997 577887665433321 11111 00
Q ss_pred CCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
......++++.+||.+||+.||++||+..+|+++
T Consensus 227 ---------------------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 227 ---------------------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ---------------------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0011236789999999999999999999999875
No 337
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.1e-39 Score=281.96 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=199.8
Q ss_pred HhhccceeeeCccccceEEEEEECCC-------CcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceecc
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-------GQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPH 82 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~ 82 (314)
..+|++.+.||+|+||.||++.+... +..+++|.+...... .....+.+|+++++++ +|+||+++++++..
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-KDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-HHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 46899999999999999999975432 236899987643222 2234567899999999 79999999999999
Q ss_pred CCeEEEEEecccc-cHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec
Q 021299 83 KGNLHLVFEFMET-DLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~ 146 (314)
++..++++||+++ +|.+++.... ..++...+..++.|++.||++||++|++|+||+|+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 9999999999985 8888886532 24778888999999999999999999999999999999999
Q ss_pred CCcEEEeeccceeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHH
Q 021299 147 HGQLKLADFGLARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (314)
Q Consensus 147 ~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~ 223 (314)
++.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 248 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999999999999765432211 112233456999999876 667899999999999999998 7889987665555444
Q ss_pred HHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCc
Q 021299 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 292 (314)
+...... ......+.++.+++.+||..+|++||++.+++++-
T Consensus 249 ~~~~~~~---------------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 249 LKEGHRM---------------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHcCCCC---------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 4321110 01124578999999999999999999999998763
No 338
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-38 Score=272.36 Aligned_cols=251 Identities=27% Similarity=0.445 Sum_probs=202.7
Q ss_pred hccceeeeCccccceEEEEEECC-CCcEEEEEEeecCCccc--------CcchhhHHHHHHHhh-cCCCCeeeeeceecc
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKE--------GVNFTALREIKLLKE-LKSPHIIELIDAFPH 82 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~-~~~~~~iK~~~~~~~~~--------~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~ 82 (314)
.|++.+.||+|++|.||++.+.. .++.+++|.+....... .....+.+|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999887 67899999886543211 112234567777764 789999999999999
Q ss_pred CCeEEEEEecccc-cHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccc
Q 021299 83 KGNLHLVFEFMET-DLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (314)
Q Consensus 83 ~~~~~iv~e~~~g-~l~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~ 157 (314)
++..+++|||+.| ++.+.+. .....+++..++.++.|++.++.+||+ .+++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999986 7777664 344568999999999999999999996 7899999999999999999999999999
Q ss_pred eeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 158 ARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
+....... ......++..|++||.+.+ ..++.++|+||||+++|+|++|.+||...........+........+
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 234 (269)
T cd08528 161 AKQKQPES-KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP---- 234 (269)
T ss_pred eeeccccc-ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCC----
Confidence 98764433 3345567888999999976 56799999999999999999999999877666655554432211110
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....++++.++|.+||+.||++||++.|+.++
T Consensus 235 ----------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 235 ----------------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ----------------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 11347899999999999999999999998754
No 339
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.3e-38 Score=270.56 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=197.9
Q ss_pred eeeCccccceEEEEEECC-CCc--EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 18 EVLGEGTYGVVYKAIDTK-TGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~-~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
+.||+|++|.||++.+.. ++. .+++|.+...... .....+.+|++.+++++|+||+++++.+.. ...++++|+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999998765 333 6899998776554 334467789999999999999999999887 88999999997
Q ss_pred -ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc---cc
Q 021299 95 -TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR---FT 169 (314)
Q Consensus 95 -g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~---~~ 169 (314)
|+|.+.+.... ..+++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 58888887655 56899999999999999999999999999999999999999999999999999876432211 11
Q ss_pred ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 170 HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 170 ~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...++..|+|||.+.+ ..++.++|+||||+++++|++ |..||......+....+.... ..+
T Consensus 159 ~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~------------ 220 (257)
T cd05040 159 HLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-----ERL------------ 220 (257)
T ss_pred CCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-----CcC------------
Confidence 2345667999998866 567899999999999999998 999998776666555543211 000
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......+..+.+++.+||+.+|++||++.++++
T Consensus 221 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 221 ---------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 011234789999999999999999999999875
No 340
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.8e-39 Score=276.47 Aligned_cols=266 Identities=21% Similarity=0.333 Sum_probs=196.7
Q ss_pred hhccceeeeCccccceEEEEEE----CCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC--Ce
Q 021299 12 DRYLKREVLGEGTYGVVYKAID----TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK--GN 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~----~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~ 85 (314)
.-|++++.||+|++|.||+++. ..++..+++|.+..... ......+.+|+++++.+.|||++++.+++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3468999999999999999974 45678999999865432 22334677899999999999999999988664 57
Q ss_pred EEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.+++|||++| +|.+++......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 8999999975 888888766556899999999999999999999999999999999999999999999999999765432
Q ss_pred CCc---ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 165 DRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 165 ~~~---~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
... .....++..|+|||.+.+ ..++.++|+||||+++|+|+++..|+..... .... ..+..... ..
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~~~---~~~~~~~~-~~---- 231 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--LFLK---MIGPTHGQ-MT---- 231 (284)
T ss_pred ccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--hhhh---hccccccc-cc----
Confidence 211 122345667999998866 5678999999999999999998765433211 0000 00000000 00
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....... .......+....++..+.+|+.+||+.+|++||++++++++
T Consensus 232 ~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 232 VTRLVRV--LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHHHHH--HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0000000 00000111234578999999999999999999999999864
No 341
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-38 Score=274.60 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=199.1
Q ss_pred HhhccceeeeCccccceEEEEEECC----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc-CCe
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH-KGN 85 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 85 (314)
.++|++.+.||+|++|.||++.+.. ++..+++|.+.... .......+.+|+.+++.++|+|++++++++.. +..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 5899999999999999999998776 25788888876432 22223456689999999999999999997644 567
Q ss_pred EEEEEeccc-ccHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccc
Q 021299 86 LHLVFEFME-TDLETVIRNTN-------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~~-------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~ 157 (314)
.++++++++ |+|..++.... ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 899999998 58888775432 4589999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCc--ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 158 ARIFGSPDRR--FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
++........ .....++..|+|||.+.+ ..++.++||||||+++|++++ |..||......+....+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---- 238 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRL---- 238 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCC----
Confidence 9754322211 112234566999998876 568999999999999999998 99999877665554443322110
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
. ....+++++.+++.+||..||++|||+.++++
T Consensus 239 ~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 A-----------------------QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred C-----------------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 01235789999999999999999999999874
No 342
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-38 Score=269.50 Aligned_cols=242 Identities=24% Similarity=0.403 Sum_probs=196.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|++.+.||+|++|.||.+. .+++.+++|.+.... ....+.+|+.+++.++|||++++.+++..+ ..+++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 3789999999999999999985 567889999986432 223567899999999999999999988654 468999
Q ss_pred ecccc-cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 91 EFMET-DLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||+.| +|.+.+.... ..+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+...... .
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---~ 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---V 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---C
Confidence 99985 8888887543 35899999999999999999999999999999999999999999999999998764321 1
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
.....+..|+|||.+.+ ..++.++|+||||+++|+|++ |.+||......+....+.......
T Consensus 155 ~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 217 (254)
T cd05083 155 DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME---------------- 217 (254)
T ss_pred CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC----------------
Confidence 22233566999998865 567899999999999999997 899998776655544433221100
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....++.++.+++.+||..+|++||+++++++
T Consensus 218 -----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 218 -----------PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -----------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01245889999999999999999999999875
No 343
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2e-38 Score=273.52 Aligned_cols=265 Identities=21% Similarity=0.339 Sum_probs=195.1
Q ss_pred hhccceeeeCccccceEEEEE----ECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec--cCCe
Q 021299 12 DRYLKREVLGEGTYGVVYKAI----DTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP--HKGN 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~----~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~ 85 (314)
++|++.+.||+|++|.||++. +..++..+++|.+..... .....+.+|+++++.++||||+++.+++. +...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 578999999999999999997 345688999999865432 22335668999999999999999998753 3457
Q ss_pred EEEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.++++||++ |+|.+++......+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 899999997 5898888776667999999999999999999999999999999999999999999999999999865332
Q ss_pred CCcc---cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 165 DRRF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 165 ~~~~---~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
.... ....++..|+|||.+.+ ..++.++|+||||+++++|++|..++...... .... .. ....... .
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~-~~---~~~~~~~----~ 231 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRM-MG---NDKQGQM----I 231 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhh-cc---ccccccc----c
Confidence 2111 11123445999999866 56789999999999999999988765433211 1000 00 0000000 0
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....+ ........+....++.++.+|+.+||..+|++|||+.+++.
T Consensus 232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 232 VYHLIE--LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hHHHHH--HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000000 00000011122456889999999999999999999999975
No 344
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.4e-38 Score=269.62 Aligned_cols=248 Identities=20% Similarity=0.340 Sum_probs=200.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..++|++.+.||+|++|.||++.+. .+..+++|.+..... ....+.+|+++++.++|+||+++.+.+.. ...+++
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII 78 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChh---HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence 3689999999999999999999754 456799998764322 23456789999999999999999999877 778999
Q ss_pred Eeccc-ccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-
Q 021299 90 FEFME-TDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~- 166 (314)
|||++ |++.+++... ...+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 99997 5898888764 44578889999999999999999999999999999999999999999999999976533211
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 222 (260)
T cd05073 159 AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--------------- 222 (260)
T ss_pred cccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC---------------
Confidence 1122334566999999876 567889999999999999998 89999877666555544322111
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+.....+.++.+++.+||+.+|++||++.++++
T Consensus 223 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 223 ------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 011245889999999999999999999998764
No 345
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=290.25 Aligned_cols=241 Identities=24% Similarity=0.360 Sum_probs=198.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+....++.||+|+.|.||+++ ..++.||||+.+-.. ..+++.|++|+|+||+.+.++|....-+|||||
T Consensus 124 e~IsELeWlGSGaQGAVF~Gr--l~netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGR--LHNETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred HHhhhhhhhccCcccceeeee--ccCceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence 445668899999999999995 457899999975221 268999999999999999999999999999999
Q ss_pred ccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 92 FME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 92 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
||. |-|...++ .+..+.......|..+|+.|+.|||.+.|+|+|||.-||||..+..|||+|||.++..... .....
T Consensus 193 fCa~GqL~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMS 270 (904)
T KOG4721|consen 193 FCAQGQLYEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMS 270 (904)
T ss_pred ccccccHHHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhh
Confidence 998 56666555 4456899999999999999999999999999999999999999999999999999876433 55567
Q ss_pred cccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhcc
Q 021299 171 QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQY 250 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
..||..|||||++.. .+.+.|.||||+||+||+|+||..|+++.+..-+ +-+.+.....
T Consensus 271 FaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwGVGsNsL~---------------- 329 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWGVGSNSLH---------------- 329 (904)
T ss_pred hhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee----EEeccCCccc----------------
Confidence 789999999999988 7889999999999999999999999976542221 1111111110
Q ss_pred ccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCc
Q 021299 251 VAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (314)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 292 (314)
-+....+++-++-||++||...|+.||+..++|.|-
T Consensus 330 ------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 330 ------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 011235688899999999999999999999999883
No 346
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-38 Score=273.68 Aligned_cols=238 Identities=19% Similarity=0.254 Sum_probs=185.8
Q ss_pred eeCccccceEEEEEECC------------------------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee
Q 021299 19 VLGEGTYGVVYKAIDTK------------------------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII 74 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~------------------------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 74 (314)
.||+|+||.||++.... ....+++|.+..... .....+.+++.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHHHHHHHHhcCCCCCee
Confidence 69999999999986422 123588888764322 2234566889999999999999
Q ss_pred eeeceeccCCeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-----
Q 021299 75 ELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG----- 148 (314)
Q Consensus 75 ~~~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~----- 148 (314)
++++++.++...++||||++| +|...+....+.+++..+..++.|++.||+|||++|++|+||||+||+++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence 999999999999999999996 66666666566789999999999999999999999999999999999997654
Q ss_pred --cEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHH
Q 021299 149 --QLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIF 225 (314)
Q Consensus 149 --~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~ 225 (314)
.++++|||.+...... ....++..|+|||.+.+...++.++|+||||+++|+++ +|..||......+.... .
T Consensus 160 ~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-Y 234 (274)
T ss_pred cceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-H
Confidence 3899999987543221 12345677999999876566899999999999999985 78899977655443222 1
Q ss_pred HhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 226 AAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.... . .....++.+.++|.+||+.+|++|||+++++++
T Consensus 235 ~~~~-~---------------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 235 EKKH-R---------------------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred Hhcc-C---------------------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 1100 0 011235689999999999999999999999875
No 347
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=275.41 Aligned_cols=267 Identities=13% Similarity=0.158 Sum_probs=195.8
Q ss_pred CccccccHHHHhhccceeeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcc---------hhhHHHHHHHhhc
Q 021299 1 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVN---------FTALREIKLLKEL 68 (314)
Q Consensus 1 ~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~---------~~~~~e~~~l~~l 68 (314)
|...-+.+...++|.+.+.||+|+||+||++.+..+ +..+++|............ .....++..+..+
T Consensus 1 ~~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (294)
T PHA02882 1 MEGIPLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI 80 (294)
T ss_pred CCCeeeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC
Confidence 667777888889999999999999999999998776 5667777644332211110 0111334455667
Q ss_pred CCCCeeeeeceeccCC----eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE
Q 021299 69 KSPHIIELIDAFPHKG----NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI 144 (314)
Q Consensus 69 ~~~~i~~~~~~~~~~~----~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~ 144 (314)
.|++++.+++...... ..+++++++..++.+.+... ...++..+..++.|++.||+|||+++++|+||||+||++
T Consensus 81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill 159 (294)
T PHA02882 81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159 (294)
T ss_pred CCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 8999999998653322 45788888887777666543 236788899999999999999999999999999999999
Q ss_pred ecCCcEEEeeccceeeeCCCC-------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc
Q 021299 145 GSHGQLKLADFGLARIFGSPD-------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD 217 (314)
Q Consensus 145 ~~~~~~~l~df~~~~~~~~~~-------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~ 217 (314)
+.++.++|+|||++....... .......||+.|+|||.+.+ ..++.++||||||+++++|++|..||.....
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999998663221 11122468999999998876 6689999999999999999999999987643
Q ss_pred -HHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 218 -IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
..........+....... ....+..+.++.+++..|+..+|++||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 239 NGNLIHAAKCDFIKRLHEG---------------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred chHHHHHhHHHHHHHhhhh---------------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 222221111100000000 0011245789999999999999999999999875
No 348
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.7e-38 Score=276.54 Aligned_cols=251 Identities=21% Similarity=0.346 Sum_probs=197.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.++|+..+.||+|++|.||++.+..+|. .+++|.+..... ......+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 4788999999999999999999877775 468887754322 22223566899999999999999999988654 46
Q ss_pred EEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 87 HLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
++++++++ |++.+.+......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 78999998 58888888766678999999999999999999999999999999999999999999999999998654322
Q ss_pred C--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 166 R--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 166 ~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
. ......++..|++||.+.+ ..++.++||||||+++|+|++ |..||...........+... .. .+
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~-~~--------- 231 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ER-LP--------- 231 (303)
T ss_pred cccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CC-CC---------
Confidence 2 1122334567999998866 668999999999999999997 88898765543333222211 00 00
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
..+..+..+.+++.+|+..+|++||+++++++.
T Consensus 232 ----------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 232 ----------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ----------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012347789999999999999999999998774
No 349
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.1e-38 Score=283.63 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=199.9
Q ss_pred HhhccceeeeCccccceEEEEEEC-----CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-----KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 84 (314)
.++|.+.+.||+|+||.||++.+. .++..|++|++....... ....+.+|++++..+. ||||+++++++..++
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS-EKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh-HHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 478899999999999999999853 345689999997543222 2335678999999997 999999999999999
Q ss_pred eEEEEEeccc-ccHHHHHHhCC----------------------------------------------------------
Q 021299 85 NLHLVFEFME-TDLETVIRNTN---------------------------------------------------------- 105 (314)
Q Consensus 85 ~~~iv~e~~~-g~l~~~~~~~~---------------------------------------------------------- 105 (314)
..++|+||+. |+|.+++...+
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 9999999998 48888875431
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec
Q 021299 106 ---------------------------------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS 146 (314)
Q Consensus 106 ---------------------------------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~ 146 (314)
..+++..+..++.|++.||+|||+.+++|+||||+||+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE 274 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence 13566778899999999999999999999999999999999
Q ss_pred CCcEEEeeccceeeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHH
Q 021299 147 HGQLKLADFGLARIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGK 223 (314)
Q Consensus 147 ~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~ 223 (314)
++.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 99999999999976432211 1122345677999999876 567899999999999999998 8889876655444433
Q ss_pred HHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
....-. .+ .....++.++.+|+.+||..+|++||++.+|+..
T Consensus 354 ~~~~~~--~~------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 354 AIKRGY--RM------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHcCC--CC------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 322100 00 0112458899999999999999999999999864
No 350
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=288.15 Aligned_cols=243 Identities=26% Similarity=0.429 Sum_probs=200.7
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i 88 (314)
..++|.....+|.|+|+.|-.+.+..+++.+++|.+........ +|+.++... +|||+++..+.+.++.+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~------~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQ------DEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccccc------cccchhhhhcCCCcceeecceecCCceeee
Confidence 56889999999999999999999999999999999987632222 455444444 79999999999999999999
Q ss_pred EEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEE-ecCCcEEEeeccceeeeCCCCC
Q 021299 89 VFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLI-GSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 89 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~-~~~~~~~l~df~~~~~~~~~~~ 166 (314)
|||.+.| .+++.+.... .....+..|+.+|+.|+.|||.+|++||||||+|||+ +..+.++|+|||.+......
T Consensus 394 v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999997 4555554443 2237788999999999999999999999999999999 58889999999999876443
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcH-HHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
......|..|.|||++.. ..++.++|+||||++||+|++|..||...... ++..++..+ .
T Consensus 470 -~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~----~------------- 530 (612)
T KOG0603|consen 470 -CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP----K------------- 530 (612)
T ss_pred -hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC----c-------------
Confidence 334456777999999985 77999999999999999999999999776555 333332111 1
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
+...+|+++++||++||+.||.+|+++.+++.||||
T Consensus 531 -------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 -------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred -------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 113579999999999999999999999999999999
No 351
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.7e-38 Score=269.38 Aligned_cols=245 Identities=22% Similarity=0.319 Sum_probs=189.2
Q ss_pred eeeCccccceEEEEEECC---CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec-cCCeEEEEEecc
Q 021299 18 EVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP-HKGNLHLVFEFM 93 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~iv~e~~ 93 (314)
+.||+|++|.||++.... .+..+++|.+..... ......+.+|+.+++.++|||++++++++. .++..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 468999999999998543 345799998753221 122335668999999999999999999764 566788999999
Q ss_pred c-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC----cc
Q 021299 94 E-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR----RF 168 (314)
Q Consensus 94 ~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~----~~ 168 (314)
. |+|.+++.......++..+..++.|++.||++||+.+++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 8 588888876655677888899999999999999999999999999999999999999999999875432211 11
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhC-CCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVE 247 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
....++..|+|||.+.+ ..++.++||||||+++|+|++| .+||......+....+......
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 221 (262)
T cd05058 160 TGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL----------------- 221 (262)
T ss_pred ccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC-----------------
Confidence 23344667999998876 5688999999999999999995 5777766555544443222100
Q ss_pred hccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 248 YQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....+++.+.+++.+||..+|++||++.+++..
T Consensus 222 ----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 222 ----------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0012347889999999999999999999999753
No 352
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.2e-38 Score=271.38 Aligned_cols=243 Identities=26% Similarity=0.382 Sum_probs=190.0
Q ss_pred eeeCccccceEEEEEECCCCc--EEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEEeccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
+.||+|++|.||++.++.++. .+++|.+..... ......+.+|++++.++ .||||+++++++...+..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 468999999999999887775 457777763321 12223566899999999 79999999999999999999999998
Q ss_pred -ccHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 95 -TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 95 -g~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
|+|.+++.... ..+++..+..++.|++.|+++||++|++|+||||+||+++.++.++|+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 58888886432 24789999999999999999999999999999999999999999999999998
Q ss_pred eeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
...... ........+..|+|||.+.. ..++.++|+||||+++++|++ |..||......+....+.... ..
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~----~~--- 230 (270)
T cd05047 160 RGQEVY-VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY----RL--- 230 (270)
T ss_pred cccchh-hhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC----CC---
Confidence 532111 11111223556999998865 668899999999999999996 999997765554444332110 00
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.....++.++.+++.+||..+|.+|||+.+++.
T Consensus 231 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 231 --------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred --------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 011235788999999999999999999999875
No 353
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.8e-39 Score=273.59 Aligned_cols=239 Identities=16% Similarity=0.243 Sum_probs=188.8
Q ss_pred eeeCccccceEEEEEECCCCc-------EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQ-------TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~-------~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
+.||+|+||.||++.+...+. .+++|.+.... ......+.+|+.+++.++|||++++++++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 469999999999998765443 47888775432 122335668999999999999999999998888999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc--------EEEeeccceeee
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--------LKLADFGLARIF 161 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~--------~~l~df~~~~~~ 161 (314)
||+++ +|.+++...+..+++..+..++.||+.||+|||++|++|+||||+||+++.++. ++++|||.+...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 99985 788888776667899999999999999999999999999999999999987764 699999988654
Q ss_pred CCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCC-CccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 162 GSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 162 ~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
... ....++..|+|||.+.+...++.++|+||||+++|+|++|. +||...+........ .. . .
T Consensus 159 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~-~----~------ 222 (258)
T cd05078 159 LPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-ED-R----H------ 222 (258)
T ss_pred CCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-Hc-c----c------
Confidence 321 22456777999999976556789999999999999999995 666655544332221 11 0 0
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
......+.++.+|+.+||+.||++|||++++++.
T Consensus 223 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 223 -----------------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -----------------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0112346789999999999999999999999864
No 354
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.2e-38 Score=269.33 Aligned_cols=236 Identities=19% Similarity=0.259 Sum_probs=186.9
Q ss_pred eeeCccccceEEEEEECCCC----------cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 18 EVLGEGTYGVVYKAIDTKTG----------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~----------~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
+.||+|++|.||++.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 46899999999999987766 35777776544322 4567789999999999999999998877 7789
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-------cEEEeecccee
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-------QLKLADFGLAR 159 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-------~~~l~df~~~~ 159 (314)
++|||+.+ +|.+++......+++..+..++.||+.||+|||++|++|+||||+||+++.++ .++|+|||.+.
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 99999985 77777766555789999999999999999999999999999999999999887 79999999998
Q ss_pred eeCCCCCcccccccCccccCcccccCc-cCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCC
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGA-KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~-~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
.... .....++..|+|||.+.+. ..++.++|+||||+++++|++ |..||.............. ... .
T Consensus 157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~----~~~--~- 225 (259)
T cd05037 157 TVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD----QHR--L- 225 (259)
T ss_pred cccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc----CCC--C-
Confidence 6543 2233455679999998774 468999999999999999998 4677766543322221110 000 0
Q ss_pred CcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 238 DLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.......+.+++.+||..+|++|||+.++++
T Consensus 226 ----------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 226 ----------------------PMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------------------CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0011378999999999999999999999985
No 355
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=279.16 Aligned_cols=264 Identities=25% Similarity=0.407 Sum_probs=200.3
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-eE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-NL 86 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~ 86 (314)
....+.|.....||+|+||.||++.-. +|..+|||.+....... ..++.+|+.++.+++|||+++++|||.+.+ ..
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~ 147 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHR 147 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceE
Confidence 344688999999999999999999754 44899999776654432 446889999999999999999999998888 59
Q ss_pred EEEEeccc-ccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 87 HLVFEFME-TDLETVIRNTNI-FLSPADIKSYMQMTLKGLAFCHKKW---VLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~-~l~~~~~~~i~~~i~~~l~~Lh~~~---i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
.+|+||+. |+|.+.+..... .++|....+|+.++|+||+|||... |+|+|||++|||+|++..+||+|||+|...
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG 227 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccC
Confidence 99999998 799999887766 8999999999999999999999853 999999999999999999999999999654
Q ss_pred CCCCCccccc-ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCC---cHHHHHHHHHhhCCCCCCCCC
Q 021299 162 GSPDRRFTHQ-VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSS---DIDQLGKIFAAFGTATPSQWP 237 (314)
Q Consensus 162 ~~~~~~~~~~-~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~ 237 (314)
.......... .||..|++||.... ...+.++||||+|++|+|+++|+.+..... ......-............+
T Consensus 228 ~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~ei- 305 (361)
T KOG1187|consen 228 PEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREI- 305 (361)
T ss_pred CccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhe-
Confidence 3312221222 78999999999977 678999999999999999999997776532 11111111111111111111
Q ss_pred CcCcccchhhhccccCCCCC-ccCC--CCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 238 DLAYLPDYVEYQYVAAPPLR-SLFP--SASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
..+.+. ..+. ..-..+..+..+|++.+|.+||+..||+.
T Consensus 306 --------------iD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 306 --------------VDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred --------------eCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 111111 0000 01223678889999999999999999753
No 356
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.4e-38 Score=269.92 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=189.8
Q ss_pred eeeCccccceEEEEEECC--CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
+.||+|+||.||++.... ....+++|.+.... .......+.+|+..++.++|+||+++++.+......+++|||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 368999999999996432 34568888765432 222234566899999999999999999999999999999999985
Q ss_pred -cHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC--Ccc
Q 021299 96 -DLETVIRNTNI----FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRF 168 (314)
Q Consensus 96 -~l~~~~~~~~~----~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~--~~~ 168 (314)
+|.+.+..... ..++..+..++.||+.|++|||++|++|+||||+||+++.++.++|+|||.+....... ...
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 88888765432 34677889999999999999999999999999999999999999999999986532221 111
Q ss_pred cccccCccccCcccccC------ccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 169 THQVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~------~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
....+++.|+|||.+.. ...++.++|+||||+++|+|++ |..||......+.............+.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------- 232 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK------- 232 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-------
Confidence 22344567999998743 2356889999999999999998 778998777666555544332211111
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......+++.+.+++..|+ .||++|||+++|++
T Consensus 233 ---------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 233 ---------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ---------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 1112346888999999998 59999999999975
No 357
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.8e-38 Score=270.47 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=201.0
Q ss_pred hhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
++|++.+.||.|+||.||+++.+. +.+.+++|.+..... ......+.+|+++++.++|+|++++++++.+....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 789999999999999999998654 345788888754322 22334677899999999999999999999998999
Q ss_pred EEEEeccc-ccHHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccc
Q 021299 87 HLVFEFME-TDLETVIRNTN--------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~--------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~ 157 (314)
+++|||++ |+|.+.+.... ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++++|||.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence 99999998 58888876543 1589999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCC-CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCC
Q 021299 158 ARIFGSP-DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (314)
Q Consensus 158 ~~~~~~~-~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
+...... ........++..|+|||.+.+ ..++.++|+||||+++|++++ |..||..................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~----- 237 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE----- 237 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcC-----
Confidence 8644222 112223345667999998866 457889999999999999998 77898766555544443322110
Q ss_pred CCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
+ .....++..+.+++.+||+.+|++||++.|++..
T Consensus 238 ~---------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 L---------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred C---------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 0112458899999999999999999999999864
No 358
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=286.51 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=208.5
Q ss_pred hccceeeeCccccceEEEEEECCCCc---E-EEEEEeecCC-cccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQ---T-VAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~---~-~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
+-.+.+.||+|+||.||++..+..+. . ||+|...... .......++++|+++++.++||||++++|+...+..++
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 44566899999999999998665432 3 8899887632 44455567889999999999999999999999999999
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
+|||+|.| +|.+++++..+.++......++.+.+.||+|||+++++||||-..|+|++.++.+||+|||++........
T Consensus 238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 99999985 99999998887899999999999999999999999999999999999999999999999999875432222
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHH-hhCCCCCCCCCCcCcccc
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFA-AFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (314)
.....--+..|+|||.+.. ..++.++||||+||++||+++ |..|+.+....+....+.. +.....+.
T Consensus 318 ~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~---------- 386 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS---------- 386 (474)
T ss_pred ccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC----------
Confidence 2212334567999999988 589999999999999999986 7889999999999888844 32222222
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
..+.++..++.+|+..+|++||+..++.
T Consensus 387 -----------------~~p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 387 -----------------KTPKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred -----------------CCHHHHHHHHHHhccCChhhccCHHHHH
Confidence 3488899999999999999999998865
No 359
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.3e-38 Score=270.85 Aligned_cols=244 Identities=25% Similarity=0.402 Sum_probs=192.8
Q ss_pred eeeCccccceEEEEEECCCC------cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 18 EVLGEGTYGVVYKAIDTKTG------QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~------~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
+.||+|++|.||++.++..+ ..+++|.+..... ......+.+|+.+++.++||||+++++++...+..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 36899999999999876433 6799998764322 2233466789999999999999999999999999999999
Q ss_pred cccc-cHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-----cEEEeecccee
Q 021299 92 FMET-DLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-----QLKLADFGLAR 159 (314)
Q Consensus 92 ~~~g-~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-----~~~l~df~~~~ 159 (314)
|++| +|.+.+... ...+++..+..++.|++.|++|||+++++|+||+|+||+++.++ .++|+|||.+.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 9985 888888642 23478899999999999999999999999999999999999887 89999999987
Q ss_pred eeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCC
Q 021299 160 IFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQW 236 (314)
Q Consensus 160 ~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----~--- 231 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG----R--- 231 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC----c---
Confidence 5432211 1122334567999999876 567999999999999999998 999998766555444332110 0
Q ss_pred CCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 237 PDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
......++..+.++|.+||..+|.+||++.++++
T Consensus 232 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 232 --------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred --------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0111245889999999999999999999999875
No 360
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.4e-38 Score=267.88 Aligned_cols=249 Identities=20% Similarity=0.264 Sum_probs=189.5
Q ss_pred eeeCccccceEEEEEECC--CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc-
Q 021299 18 EVLGEGTYGVVYKAIDTK--TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME- 94 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~- 94 (314)
+.||+|+||.||++.... ++..+++|.+...... .....+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 468999999999997543 4567999988655432 222356789999999999999999999998889999999998
Q ss_pred ccHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC--cc
Q 021299 95 TDLETVIRNTN----IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR--RF 168 (314)
Q Consensus 95 g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~ 168 (314)
|+|.+++.... ...++..+..++.|++.|++|||++|++|+||||+||+++.++.++|+|||.+........ ..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 58888876432 2456778889999999999999999999999999999999999999999999865432211 11
Q ss_pred cccccCccccCcccccCc------cCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 169 THQVFARWYRAPELLFGA------KQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~------~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
....++..|+|||.+.+. ..++.++|+||||+++|+|++ |..||......+.............+.
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------- 232 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK------- 232 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC-------
Confidence 233456779999988542 135789999999999999996 999998766555433322211110100
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.......++.+.+++.+|+ .+|++|||+++|+.
T Consensus 233 ---------------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 233 ---------------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ---------------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 1111235788999999998 68999999999874
No 361
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.8e-38 Score=271.52 Aligned_cols=254 Identities=21% Similarity=0.340 Sum_probs=198.5
Q ss_pred hhccceeeeCccccceEEEEEECC----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceecc--CCe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPH--KGN 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~ 85 (314)
+.|++.+.||+|++|.||++.... ++..+++|.+...... .....+.+|+++++.+.|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 578899999999999999998543 4789999999765443 234467789999999999999999998866 557
Q ss_pred EEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 86 LHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.+++|||+++ ++.+.+......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 8999999975 888888776667999999999999999999999999999999999999999999999999999876432
Q ss_pred CCcc---cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHH-----------HHHHHHhhCC
Q 021299 165 DRRF---THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-----------LGKIFAAFGT 230 (314)
Q Consensus 165 ~~~~---~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~-----------~~~~~~~~~~ 230 (314)
.... ....++..|++||.+.+ ..++.++|+||||+++++|++|..|+........ ...+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 2211 12233456999998866 5678999999999999999999988755322110 0001000000
Q ss_pred CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
....+.....+.++.+++.+||..+|++|||+.|+++
T Consensus 242 -----------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 242 -----------------------GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred -----------------------CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0001112345789999999999999999999999875
No 362
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.3e-38 Score=267.59 Aligned_cols=228 Identities=23% Similarity=0.315 Sum_probs=183.6
Q ss_pred cccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cHHHHH
Q 021299 23 GTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVI 101 (314)
Q Consensus 23 g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l~~~~ 101 (314)
|.+|.||++.++.+++.+++|.+..... ..++...+....|||++++++++.+....+++|||++| +|.+.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 7899999999999999999999976432 12344445556799999999999999999999999985 788877
Q ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCcc
Q 021299 102 RNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPE 181 (314)
Q Consensus 102 ~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE 181 (314)
.... .+++..+..++.|++.||.+||++|++|+||||+||+++.++.++++|||.+....... ....++..|+|||
T Consensus 77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~y~aPE 152 (237)
T cd05576 77 SKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENMYCAPE 152 (237)
T ss_pred HHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCccccCCc
Confidence 6543 58999999999999999999999999999999999999999999999999876543321 2234466799999
Q ss_pred cccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCC
Q 021299 182 LLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261 (314)
Q Consensus 182 ~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (314)
.+.. ..++.++|+||+|+++|+|++|..|+....... ..... .....
T Consensus 153 ~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------~~~~~-----------------------~~~~~ 199 (237)
T cd05576 153 VGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGI---------NTHTT-----------------------LNIPE 199 (237)
T ss_pred ccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------ccccc-----------------------cCCcc
Confidence 8865 567899999999999999999998764321100 00000 01123
Q ss_pred CCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccc
Q 021299 262 SASDDALDLLSKMFTYDPKARITA-----QQALEHRFA 294 (314)
Q Consensus 262 ~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~ 294 (314)
.+++.+.++|.+||+.||++||++ ++++.||||
T Consensus 200 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 200 WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 468899999999999999999996 999999997
No 363
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=265.64 Aligned_cols=279 Identities=34% Similarity=0.524 Sum_probs=230.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC------
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------ 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 84 (314)
-.||.-++.+|.|+. .|..+.+.-.+.++++|+...........++..+|...+..+.|+||+.+..+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 478999999999999 8889999999999999999877666666677889999999999999999999884333
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
.+|+|||++..++...++. .++-+.+..++.|++.|+.|||+.||+||||||+||+++.++.+||.|||++...+..
T Consensus 95 e~y~v~e~m~~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILM---ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhhHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 5799999999999888873 2677889999999999999999999999999999999999999999999999876544
Q ss_pred CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC----
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA---- 240 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 240 (314)
...+..+.+..|.|||++.+ ..+....||||+||++.+|++|...|++.+..+...++.+..++..+..+.+..
T Consensus 172 -~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 172 -FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred -cccCchhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 45566778899999999988 458999999999999999999999999999999999999988887766443211
Q ss_pred ----------cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 241 ----------YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 241 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
.......+.-...+......+.-+..+++++.+||-.||++|.|+.++|+|||++
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 1111111111111111111233466799999999999999999999999999999
No 364
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.2e-38 Score=298.32 Aligned_cols=148 Identities=24% Similarity=0.468 Sum_probs=130.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcc-cCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQK-EGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.++|.+.+.||.|+||+||++.+..+++.||+|++...... ......+..|+.+++.++|+||+++++.+....+.|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 47899999999999999999999999999999999754322 12223556789999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
|||+.| +|..++... +.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 83 mEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999975 787777654 458999999999999999999999999999999999999999999999999875
No 365
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.5e-38 Score=267.95 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=194.2
Q ss_pred ccceeeeCccccceEEEEEECC---CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC------
Q 021299 14 YLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG------ 84 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 84 (314)
|.+.+.||+|++|.||++.+.. ++..+++|.+............+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6788999999999999998543 5688999999766544444456778999999999999999999874432
Q ss_pred eEEEEEeccc-ccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 85 NLHLVFEFME-TDLETVIRNT-----NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 85 ~~~iv~e~~~-g~l~~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
..+++++|+. |++..++... ...++...+..++.|++.|++|||++|++|+||+|+||+++.++.++|+|||.+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 2468889987 5776665432 124788999999999999999999999999999999999999999999999998
Q ss_pred eeeCCCCC--cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCC
Q 021299 159 RIFGSPDR--RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQ 235 (314)
Q Consensus 159 ~~~~~~~~--~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
........ ......+++.|++||.+.. ..++.++|+||||+++|+|++ |.+||......+....+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---- 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLK---- 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCC----
Confidence 76533221 1112234567999998866 567889999999999999998 889987766554444333211000
Q ss_pred CCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
.....++.+.+++.+||..+|++||++.+++.+
T Consensus 236 -----------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 236 -----------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -----------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012357899999999999999999999998753
No 366
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=272.30 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=221.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchh-hHHHHHHHhhcC-CCCeeeeeceeccCCeEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKELK-SPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~-~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 89 (314)
.+|..+.+||.|+||.|-++..+.+.+.||||+++++..-.....+ -+.|-++|.... -|.+++++..|+.-+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 5788999999999999999999999999999999887644333222 235667776553 58899999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
|||+.| +|.--+++ -+.+.+..|.-++..|+.||-+||++||+++|||.+||+++.+|.+||+|||.++..-......
T Consensus 429 MEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT 507 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT 507 (683)
T ss_pred EEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence 999996 66555554 4468999999999999999999999999999999999999999999999999998765556666
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
....|||-|+|||++.= .+|+...|.||+||+||+|+.|++||.+.+..+....+....-+
T Consensus 508 kTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs------------------ 568 (683)
T KOG0696|consen 508 KTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS------------------ 568 (683)
T ss_pred eeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc------------------
Confidence 67789999999998855 78999999999999999999999999999999999998876432
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
+..++|.++.+++...|.+.|.+|..+ .+|-+||||+.++
T Consensus 569 ----------yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 569 ----------YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred ----------CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence 234579999999999999999999876 6799999999874
No 367
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=310.65 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=213.1
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
=+|.....||.|.||.||.+....+|+..|+|.+..............+|..++..++|||+++++++=......+|.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 46777789999999999999999999999999998876665555566799999999999999999999888888999999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC----Cc
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD----RR 167 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~----~~ 167 (314)
||.|+.+..+.+.++..++-....+-.|++.|++|||++||+|+||||.||+++.+|.+|++|||.|....... ..
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 99975444444455456777778888999999999999999999999999999999999999999998774432 12
Q ss_pred ccccccCccccCcccccCcc--CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 FTHQVFARWYRAPELLFGAK--QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~--~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
-.+..||+.|||||++.+.. .-..++|||||||++.||+||+.||...+....+--.+..
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~------------------ 1456 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA------------------ 1456 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc------------------
Confidence 23567999999999997633 3467999999999999999999999876665544332221
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
+..++++..++++.+++|..||+.||.+|+++.|+++|-|=+.
T Consensus 1457 --------gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1457 --------GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred --------cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 1122233457999999999999999999999999999988653
No 368
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=297.24 Aligned_cols=256 Identities=24% Similarity=0.372 Sum_probs=212.3
Q ss_pred ccHHHHhhccceeeeCccccceEEEEEECCCCc-----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeecee
Q 021299 6 LSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQ-----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF 80 (314)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 80 (314)
|+..=.+.-+..+.||+|+||.||.+....... .|++|.+..... .+...+|.+|+.+++.++|||||++++++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDHPNIVSLIGVC 764 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCcceeeEEEee
Confidence 444445677889999999999999998665332 489998876543 34455788999999999999999999999
Q ss_pred ccCCeEEEEEeccc-ccHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEe
Q 021299 81 PHKGNLHLVFEFME-TDLETVIRNT------NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLA 153 (314)
Q Consensus 81 ~~~~~~~iv~e~~~-g~l~~~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~ 153 (314)
-+....+|++|||. |+|++++++. ...++......++.||++|+.||++++++|+||...|+|++....|||+
T Consensus 765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence 88999999999998 5999999987 5679999999999999999999999999999999999999999999999
Q ss_pred eccceeeeCCC-CCcccc-cccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCC
Q 021299 154 DFGLARIFGSP-DRRFTH-QVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGT 230 (314)
Q Consensus 154 df~~~~~~~~~-~~~~~~-~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~ 230 (314)
|||+|+..-.. ...... ..-+..|||||.+.. ..++.|+||||+||++||+++ |..||...+..+.......+-.-
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL 923 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL 923 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc
Confidence 99999844222 111111 233456999999987 789999999999999999996 45899999988888755544222
Q ss_pred CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.+| ..+++.+.+++.+||..+|++||+...|++
T Consensus 924 ~~P---------------------------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 DPP---------------------------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCC---------------------------CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 222 245888999999999999999999999987
No 369
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=274.23 Aligned_cols=268 Identities=27% Similarity=0.439 Sum_probs=214.6
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc-----hhhHHHHHHHhhcCCCCeeeeecee-cc
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-----FTALREIKLLKELKSPHIIELIDAF-PH 82 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-----~~~~~e~~~l~~l~~~~i~~~~~~~-~~ 82 (314)
.+.++|-.+..||.|+|+.||++.+......+|+|+-.....+.+.. +...+|.++.+.++||.||+++++| .+
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 57899999999999999999999998888889999876665443322 3455799999999999999999998 46
Q ss_pred CCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCCCceEEec---CCcEEEeeccc
Q 021299 83 KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK--WVLHRDMKPNNLLIGS---HGQLKLADFGL 157 (314)
Q Consensus 83 ~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~--~i~H~di~~~nil~~~---~~~~~l~df~~ 157 (314)
...+|.|.|||+|+-+++..+..+.+++..++.|+.||+.||.||... .|+|.||||.||++.. .|.+||+|||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 678999999999966666666666799999999999999999999976 5999999999999843 47899999999
Q ss_pred eeeeCCCCCcc-------cccccCccccCcccccCc---cCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHh
Q 021299 158 ARIFGSPDRRF-------THQVFARWYRAPELLFGA---KQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAA 227 (314)
Q Consensus 158 ~~~~~~~~~~~-------~~~~~~~~y~sPE~~~~~---~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~ 227 (314)
+++++.+.... ....||.||++||++.-+ ...+.+.||||.|||+|+++.|..||..+.....+-+.--.
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 99986654432 234679999999998643 34588999999999999999999999887654433221111
Q ss_pred hCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 228 FGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
+.. ....+| + .+.+++++..+|++||.--.+.|.+..++..||+|.-..
T Consensus 700 lkA-tEVqFP-----------------~----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 700 LKA-TEVQFP-----------------P----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred hcc-eeccCC-----------------C----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 000 001111 1 245799999999999999999999999999999997643
No 370
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-36 Score=260.60 Aligned_cols=248 Identities=20% Similarity=0.233 Sum_probs=187.4
Q ss_pred eeCccccceEEEEEECCC--CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-
Q 021299 19 VLGEGTYGVVYKAIDTKT--GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET- 95 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g- 95 (314)
.||+|+||.||++..... ...+++|.+..... ......+.+|+..++.++||||+++++.+......+++|||+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 589999999999974332 23566777654332 22334677899999999999999999999999999999999985
Q ss_pred cHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC--Ccccc
Q 021299 96 DLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD--RRFTH 170 (314)
Q Consensus 96 ~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~ 170 (314)
+|.+.+... ....+...+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||.+....... .....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 888888653 2346677888999999999999999999999999999999999999999999875432111 12233
Q ss_pred cccCccccCcccccC------ccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 171 QVFARWYRAPELLFG------AKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 171 ~~~~~~y~sPE~~~~------~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
..++..|+|||.+.. ...++.++|+||||+++|+|++ |..||......+....+........+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 231 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFK--------- 231 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCC---------
Confidence 456778999998743 1235789999999999999996 467887766665555543321111100
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
+......++.+.+++..|+ .+|++||++++|++
T Consensus 232 -------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 232 -------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred -------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 1112245788999999999 67999999999975
No 371
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-38 Score=287.97 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=207.5
Q ss_pred hhccceeeeCccccceEEEEEECC-----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK-----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
.+-...+.||+|+||+||+++--. ....||||.++.. ...+.+.+|.+|++.+..++|||||+++|++.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 455678899999999999996332 2357999999754 3344667899999999999999999999999999999
Q ss_pred EEEEeccc-ccHHHHHHhCCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEE
Q 021299 87 HLVFEFME-TDLETVIRNTNI-------------FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKL 152 (314)
Q Consensus 87 ~iv~e~~~-g~l~~~~~~~~~-------------~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l 152 (314)
++|||||. |+|.+++....+ +++..+...|+.||+.|+.||-++.++|+||-..|.||.++..|||
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence 99999998 899999975322 3788899999999999999999999999999999999999999999
Q ss_pred eeccceeeeCCC-CC-cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhC
Q 021299 153 ADFGLARIFGSP-DR-RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFG 229 (314)
Q Consensus 153 ~df~~~~~~~~~-~~-~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~ 229 (314)
+|||+++..-.. .. ......-+.+|||||.+.- ..++.+|||||+||+|||+++ |..|+-.....+.++.+..+..
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l 723 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL 723 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc
Confidence 999999865221 11 1112334677999999876 678999999999999999984 5689999999998888877643
Q ss_pred CCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHH
Q 021299 230 TATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288 (314)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 288 (314)
-.. ....+.++.+|+..||...|.+||+.+||
T Consensus 724 L~~---------------------------Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 724 LSC---------------------------PENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred ccC---------------------------CCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 222 23568999999999999999999999997
No 372
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.4e-36 Score=253.57 Aligned_cols=242 Identities=40% Similarity=0.614 Sum_probs=198.8
Q ss_pred ccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccc-cHHHHHH
Q 021299 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMET-DLETVIR 102 (314)
Q Consensus 24 ~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g-~l~~~~~ 102 (314)
++|.||++.+..+|+.+++|.+........ ...+.+|++.++.++|++++++.+.+......++++|++++ +|.+.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 578999999988899999999976544322 45677899999999999999999999888999999999997 8888876
Q ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCccc
Q 021299 103 NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPEL 182 (314)
Q Consensus 103 ~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~ 182 (314)
.... ++...++.++.+++.++.+||+.+++|+||+|.||+++.++.++|+|||.+....... ......++..|+|||.
T Consensus 80 ~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 80 KRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEV 157 (244)
T ss_pred hccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHH
Confidence 5543 8999999999999999999999999999999999999999999999999998764432 3344567778999999
Q ss_pred ccCccCCCCcchHhhHHHHHHHHHhCCCccCCC-CcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCC
Q 021299 183 LFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS-SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFP 261 (314)
Q Consensus 183 ~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (314)
+.+ ..++.++|+||||++++++++|..||... ........+......... ...
T Consensus 158 ~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ 211 (244)
T smart00220 158 LLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP-------------------------PEW 211 (244)
T ss_pred Hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc-------------------------ccc
Confidence 875 56788999999999999999999999773 333333332221111100 001
Q ss_pred CCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 262 SASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 262 ~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.++.++.+++.+||..+|++||++.++++||||
T Consensus 212 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 212 KISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred cCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 157899999999999999999999999999997
No 373
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=264.57 Aligned_cols=290 Identities=29% Similarity=0.478 Sum_probs=220.0
Q ss_pred ccccHHHH-hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-----C---CCee
Q 021299 4 VDLSKKVA-DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-----S---PHII 74 (314)
Q Consensus 4 ~~~~~~~~-~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-----~---~~i~ 74 (314)
|-+++.+. +||.+.+.||.|-|+|||++.+..+.+.||+|+.+... .-......|+++|++++ + .+||
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV 145 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVV 145 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceee
Confidence 55677787 99999999999999999999999999999999987532 12224558999999884 2 4799
Q ss_pred eeecee----ccCCeEEEEEecccccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecC-
Q 021299 75 ELIDAF----PHKGNLHLVFEFMETDLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSH- 147 (314)
Q Consensus 75 ~~~~~~----~~~~~~~iv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~- 147 (314)
++++.| .++.++++|+|+.+.+|+.++... ...++...+.+|++||+.||.|||. .||+|-||||+|||+..+
T Consensus 146 ~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e 225 (590)
T KOG1290|consen 146 QLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTE 225 (590)
T ss_pred eeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccc
Confidence 999998 455699999999999999999754 5679999999999999999999997 599999999999999600
Q ss_pred --------------------------------------------------------------------------------
Q 021299 148 -------------------------------------------------------------------------------- 147 (314)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (314)
T Consensus 226 ~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~ 305 (590)
T KOG1290|consen 226 IDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNN 305 (590)
T ss_pred cchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 021299 148 -------------------------------------------------------------------------------- 147 (314)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (314)
T Consensus 306 ~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~ 385 (590)
T KOG1290|consen 306 EPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIP 385 (590)
T ss_pred ccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCC
Confidence
Q ss_pred -----CcEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCC------CC
Q 021299 148 -----GQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG------SS 216 (314)
Q Consensus 148 -----~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~------~~ 216 (314)
-++||.|||.|+... ......+-|..|.|||++.+ ..|+..+||||++|++|||+||...|.. ..
T Consensus 386 ~~~~di~vKIaDlGNACW~~---khFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r 461 (590)
T KOG1290|consen 386 LPECDIRVKIADLGNACWVH---KHFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR 461 (590)
T ss_pred CCccceeEEEeeccchhhhh---hhhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc
Confidence 013444444443321 11223344556999999998 7899999999999999999999988855 45
Q ss_pred cHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCC--CCCcc------------CCCCCHHHHHHHhhhcccCCCCC
Q 021299 217 DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAP--PLRSL------------FPSASDDALDLLSKMFTYDPKAR 282 (314)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------~~~~~~~~~~li~~~l~~dp~~R 282 (314)
+.+.++.|+...+..+..-.-.-.....+++....... .++.+ ...-..++.+++.-||+.+|++|
T Consensus 462 DEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR 541 (590)
T KOG1290|consen 462 DEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKR 541 (590)
T ss_pred cHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccc
Confidence 88899999988887765543332222222222111110 01111 11224568899999999999999
Q ss_pred CCHHHHhcCccccccCcc
Q 021299 283 ITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 283 ps~~ell~h~~~~~~~~~ 300 (314)
|||.++|+|||++.+.+.
T Consensus 542 ~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 542 PTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ccHHHHhcCccccCCCCC
Confidence 999999999999988765
No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.4e-38 Score=274.62 Aligned_cols=287 Identities=31% Similarity=0.510 Sum_probs=230.0
Q ss_pred ccccHHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC------CCeeeee
Q 021299 4 VDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS------PHIIELI 77 (314)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~ 77 (314)
|.+++.|-++|.+....|+|-|++|.+|.+..-|..||||+++..... ...-..|+++|+.|+. -|.+.++
T Consensus 424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 668888999999999999999999999999999999999999865432 1233479999999963 4888899
Q ss_pred ceeccCCeEEEEEecccccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEee
Q 021299 78 DAFPHKGNLHLVFEFMETDLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLAD 154 (314)
Q Consensus 78 ~~~~~~~~~~iv~e~~~g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~d 154 (314)
..|...++.|+|||.+.-+|.+.++.-+ ..+....++.++.|++.||.+|-..|++|.||||+||||+++ ..+||||
T Consensus 501 r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred HHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence 9999999999999999999999998654 457889999999999999999999999999999999999886 5799999
Q ss_pred ccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 155 FGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 155 f~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
||.|...+.... .....+..|.|||++.+ .+|...-|+||.||+||+|.||+..|++......+.-.+..-+..+-.
T Consensus 581 fGSA~~~~enei--tPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~K 657 (752)
T KOG0670|consen 581 FGSASFASENEI--TPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNK 657 (752)
T ss_pred Cccccccccccc--cHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHH
Confidence 999987654332 23344566999999988 889999999999999999999999999999999998888776665544
Q ss_pred CCCCcCcccchhhhc----ccc------------CCCCCc----------------cCCCCCHHHHHHHhhhcccCCCCC
Q 021299 235 QWPDLAYLPDYVEYQ----YVA------------APPLRS----------------LFPSASDDALDLLSKMFTYDPKAR 282 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~----~~~------------~~~~~~----------------~~~~~~~~~~~li~~~l~~dp~~R 282 (314)
-+....+.++.+... +.. .....+ --+.+-..+++|+.+||..||++|
T Consensus 658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 333222222221110 000 000111 011123458899999999999999
Q ss_pred CCHHHHhcCccccc
Q 021299 283 ITAQQALEHRFAKS 296 (314)
Q Consensus 283 ps~~ell~h~~~~~ 296 (314)
.|+.|+|.||||+.
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999973
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=280.43 Aligned_cols=259 Identities=29% Similarity=0.397 Sum_probs=219.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeecee-----ccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAF-----PHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~-----~~~~ 84 (314)
.+-|++.+.||.|.+|.||+++.+.+|+..++|+...... ...++..|.++++.. .|||++.++++| ..++
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 5789999999999999999999999999999999976544 334666788888888 589999999987 3566
Q ss_pred eEEEEEecccc-cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 85 NLHLVFEFMET-DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
..|+|||||+| +.-++++.. +..+.++.+..|++.++.|+.|||.+.++|+|||-.||+++.++.|||+|||.+...+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 89999999995 666777644 5679999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCcccccccCccccCcccccCcc----CCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 163 SPDRRFTHQVFARWYRAPELLFGAK----QYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 163 ~~~~~~~~~~~~~~y~sPE~~~~~~----~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
.-.......+|||.|||||++.... .+...+|+||||++..+|..|.+|+.+..+...+..+-. .+|..+..
T Consensus 175 sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR----NPPPkLkr 250 (953)
T KOG0587|consen 175 STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----NPPPKLKR 250 (953)
T ss_pred cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC----CCCccccc
Confidence 7777788899999999999986533 357889999999999999999999988777666554422 12222211
Q ss_pred cCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 239 LAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
+...+.++.++|..||.+|-.+||+..++|.|||+...
T Consensus 251 ---------------------p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 251 ---------------------PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ---------------------hhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 12348899999999999999999999999999999844
No 376
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=260.08 Aligned_cols=297 Identities=35% Similarity=0.622 Sum_probs=235.5
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC-----eEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG-----NLH 87 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 87 (314)
+....+.||-|+||.||.+.+-.+|+++++|++..-...-...+...+|+.++..++|.|++...+..+... ..|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 445678899999999999999999999999999765555445556778999999999999999988875443 356
Q ss_pred EEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-
Q 021299 88 LVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 88 iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~- 166 (314)
+++|.+..+|...+.+- ..++.+.+.-+..||++||+|||+-||.|+||||.|.+++.|..+||||||+++....+..
T Consensus 134 V~TELmQSDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHHHHhhhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 78888888887777644 3689999999999999999999999999999999999999999999999999987654433
Q ss_pred cccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 167 RFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
.-...+.|.+|.+||++.+...|+.+.||||.|||+.|++..+..|....+.+.+..+....++++.+.+..-...-..-
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 33345668889999999998999999999999999999999999999999999999999999988776544211111110
Q ss_pred hhccc-cCCCCCccC-----CCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcceeecccceecc
Q 021299 247 EYQYV-AAPPLRSLF-----PSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFVFVDFCSYLY 311 (314)
Q Consensus 247 ~~~~~-~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~~~~~~~~ 311 (314)
..... ..+.++..+ .....+...++.++|..||++|.+.++.+.|+++....=.+-++ -|+.|+
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~~sC-mC~~~~ 362 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSC-MCSCCY 362 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceeeeee-eEeeec
Confidence 00111 111111111 12356788999999999999999999999999998776555555 344444
No 377
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-38 Score=280.20 Aligned_cols=270 Identities=26% Similarity=0.330 Sum_probs=201.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccC------Ce
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHK------GN 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~ 85 (314)
.-|...+.||+|+||.||+++++.+|..+|+|.+.... .........+|++++++++|+|||+.+++=++. ..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 44567789999999999999999999999999998754 222333455899999999999999999985433 35
Q ss_pred EEEEEecccc-cHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec--CC--cEEEeeccce
Q 021299 86 LHLVFEFMET-DLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS--HG--QLKLADFGLA 158 (314)
Q Consensus 86 ~~iv~e~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~--~~--~~~l~df~~~ 158 (314)
..++||||.| +|...+.+- ..++++.....+..++..||.|||++||+||||||.||++-. +| ..||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 6899999985 777777642 346999999999999999999999999999999999999843 33 5899999999
Q ss_pred eeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCC
Q 021299 159 RIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPD 238 (314)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
+..+.+ ....+..||+.|++||.+..+++++...|.||+||++|+++||..||...........+.-...+..+....-
T Consensus 172 rel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 172 RELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred ccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 987544 4777889999999999998668899999999999999999999999976554432222222222333333221
Q ss_pred cC--cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC
Q 021299 239 LA--YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT 284 (314)
Q Consensus 239 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 284 (314)
.. ..+.........+. -.+..+.+-..+...+..+|..+|++|..
T Consensus 251 ~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLEWNPRKRGH 297 (732)
T ss_pred eeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHhhhHHHhCC
Confidence 11 11111111111111 11222233445668889999999999983
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-39 Score=257.33 Aligned_cols=264 Identities=21% Similarity=0.313 Sum_probs=207.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 89 (314)
.+..+-++.||.|+||+|++..++.+|+..|+|.++..... .....+..|.....+- ++|+||++++..-.++..|+.
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~-keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiC 141 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE-KEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWIC 141 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch-HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeee
Confidence 35566788999999999999999999999999999876542 2233444555544444 689999999999899999999
Q ss_pred EecccccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEEEeeccceeeeCCC
Q 021299 90 FEFMETDLETVIRN----TNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP 164 (314)
Q Consensus 90 ~e~~~g~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~ 164 (314)
||.|+-++..+.+. ....+++..+-.+..-.+.||.||-. .+|+|||+||+||+++..|.+||||||.+-... +
T Consensus 142 MELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-~ 220 (361)
T KOG1006|consen 142 MELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-D 220 (361)
T ss_pred HHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH-H
Confidence 99999876655532 24458999888888888999999986 589999999999999999999999999996542 2
Q ss_pred CCcccccccCccccCcccccCccC-CCCcchHhhHHHHHHHHHhCCCccCC-CCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 165 DRRFTHQVFARWYRAPELLFGAKQ-YGAGVDVWAAGCIFAELLNRRPFLQG-SSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~~~~-~~~~~Di~slG~ll~~ll~g~~pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+.......|-..|+|||.+..... +..+||+||||++|||+.||..|+.. .+..+++..+..+-.+........
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~---- 296 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKEC---- 296 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccc----
Confidence 222334456667999999976444 89999999999999999999988854 445555555554422222111110
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
-+.+..+..+|..||.+|-+.||.-.+++++||++...
T Consensus 297 ------------------~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 297 ------------------VHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA 334 (361)
T ss_pred ------------------cccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence 14688999999999999999999999999999998663
No 379
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=273.19 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=221.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCC-cccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-QKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..+.+++.-||-|+||.|-++..+.....+|+|++++.. -+.........|-+++...+.|.|++++..|.++.++|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 356678889999999999999877666568999887643 2222233566899999999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
||.|-| .+.+.+..+ +.+++..++-++..++.|+.|||++||+++||||+|.+++.+|-+||.|||+|+..+... ..
T Consensus 499 mEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~-KT 576 (732)
T KOG0614|consen 499 MEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR-KT 576 (732)
T ss_pred HHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC-ce
Confidence 999975 777776654 469999999999999999999999999999999999999999999999999999886544 34
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
...+|||.|.|||++.. .....+.|.|+||+++|+|++|.+||.+.++..++..+.+++...
T Consensus 577 wTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i----------------- 638 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI----------------- 638 (732)
T ss_pred eeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-----------------
Confidence 56689999999999876 556899999999999999999999999999999999998874322
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC-----HHHHhcCccccccC
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT-----AQQALEHRFAKSFN 298 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~~~ 298 (314)
.++..++..+.+||++++.-+|.+|.. +.+|-.|.||.+++
T Consensus 639 ---------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 639 ---------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred ---------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence 112356889999999999999999987 79999999999985
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.9e-36 Score=280.56 Aligned_cols=276 Identities=20% Similarity=0.272 Sum_probs=177.7
Q ss_pred HhhccceeeeCccccceEEEEEECCC----CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeece------e
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDA------F 80 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~------~ 80 (314)
.++|.+.+.||+|+||.||++.+..+ +..+++|.+...... +.... ..++...+.++..+... .
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~-e~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMN-ERVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHH-HHHHhhchhhHHHHHHhhhccccc
Confidence 57899999999999999999999888 899999987532211 11101 11122122222222211 2
Q ss_pred ccCCeEEEEEecccc-cHHHHHHhCCCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCC
Q 021299 81 PHKGNLHLVFEFMET-DLETVIRNTNIF-------------------LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPN 140 (314)
Q Consensus 81 ~~~~~~~iv~e~~~g-~l~~~~~~~~~~-------------------l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~ 140 (314)
......++++||+++ +|.+.+...... .....+..++.||+.||.|||+++|+|+||||+
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~ 284 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence 455678999999985 777777643211 123446789999999999999999999999999
Q ss_pred ceEEec-CCcEEEeeccceeeeCCC-CCcccccccCccccCcccccCcc---------------------CCCCcchHhh
Q 021299 141 NLLIGS-HGQLKLADFGLARIFGSP-DRRFTHQVFARWYRAPELLFGAK---------------------QYGAGVDVWA 197 (314)
Q Consensus 141 nil~~~-~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~y~sPE~~~~~~---------------------~~~~~~Di~s 197 (314)
||+++. ++.+||+|||++...... ........+++.|+|||.+.... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999986 579999999999765322 22233456788999999763211 1335679999
Q ss_pred HHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhccc
Q 021299 198 AGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTY 277 (314)
Q Consensus 198 lG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 277 (314)
|||++|+|+++..++. ................ ...|... ...... .. ....-...........+||.+||+.
T Consensus 365 lGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~-~~~~~~~--~~~~~~--~~-~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 365 AGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYD-LVAWRKL--VEPRAS--PD-LRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCc-HHHHHHh--hccccc--hh-hhhhhhhccccchHHHHHHHHHccC
Confidence 9999999998665432 2222222222221110 0000000 000000 00 0000011122355677999999999
Q ss_pred CCCCCCCHHHHhcCccccccCcc
Q 021299 278 DPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 278 dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
||++|||++|+|+||||+.....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCcc
Confidence 99999999999999999976543
No 381
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.9e-37 Score=243.90 Aligned_cols=279 Identities=30% Similarity=0.568 Sum_probs=216.1
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceec--cCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFP--HKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~--~~~~~~ 87 (314)
.++|++++.+|.|-++.|+.+....+++.+++|.+++-. ..++.+|+.+++.+. +|||+++.+... .+....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 588999999999999999999988899999999997543 346779999999997 999999999874 455778
Q ss_pred EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeeeCCCC
Q 021299 88 LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPD 165 (314)
Q Consensus 88 iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~~~~~ 165 (314)
++||+++. +...+.. .++...++.++.+++.||.|+|++||.|+|+||-|++++.. .+++|+|+|+|.+....
T Consensus 112 LiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~- 186 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG- 186 (338)
T ss_pred hHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC-
Confidence 99999996 4444433 37788899999999999999999999999999999999875 57999999999876433
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCC-CccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc--c
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR-PFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY--L 242 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 242 (314)
....-.+.+..|..||++..-..+....|+|||||++..|+..+ +.|.+.+..+++-++....++.....+-.-.. +
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 33334456777999999988778999999999999999998887 55577888888888877766543221110000 0
Q ss_pred cc--------hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCcc
Q 021299 243 PD--------YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGV 300 (314)
Q Consensus 243 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 300 (314)
+. ..........+ ...-.-+++++.+|+.++|.-|..+|+|+.|.+.||||..+.+.
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~-~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFIN-SENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred ChhHhhHhhccccccHHHhCC-ccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 00 00000000000 00112257999999999999999999999999999999877544
No 382
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-36 Score=266.07 Aligned_cols=260 Identities=26% Similarity=0.387 Sum_probs=207.2
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.-|..++.||-|+||.|.++....+...||+|.+++...... ......-|-.+|...+++-||+++-.|++.+..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 457889999999999999999988989999999976542211 1112335778899999999999999999999999999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC------
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS------ 163 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~------ 163 (314)
+|++| ++.+++.+.+ -+++..++.++..++.|+++.|..|++|+||||+|||||.+|.+||+|||+|+-+..
T Consensus 709 dYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred eccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99986 8888877665 589999999999999999999999999999999999999999999999999954310
Q ss_pred ---C-----C----------------------------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh
Q 021299 164 ---P-----D----------------------------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN 207 (314)
Q Consensus 164 ---~-----~----------------------------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~ 207 (314)
. . ...-..+||+-|+|||++.. ..++..+|.||.|||||+|+.
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhh
Confidence 0 0 00013478888999999977 568999999999999999999
Q ss_pred CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---
Q 021299 208 RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT--- 284 (314)
Q Consensus 208 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps--- 284 (314)
|++||-+..+.++-.++.. |...- --+.-..++.+..+||.++++ ++++|..
T Consensus 867 g~~pf~~~tp~~tq~kv~n---------w~~~l---------------~~~~~~~ls~e~~~li~kLc~-sad~RLGkng 921 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVIN---------WRNFL---------------HIPYQGNLSKEALDLIQKLCC-SADSRLGKNG 921 (1034)
T ss_pred CCCCccCCCCCcceeeeee---------hhhcc---------------ccccccccCHHHHHHHHHHhc-Chhhhhcccc
Confidence 9999988877666544321 11100 001113569999999998766 4667765
Q ss_pred HHHHhcCccccccC
Q 021299 285 AQQALEHRFAKSFN 298 (314)
Q Consensus 285 ~~ell~h~~~~~~~ 298 (314)
++||..||||+.++
T Consensus 922 ~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 922 ADQVKAHPFFKGID 935 (1034)
T ss_pred hhhhhcCccccccc
Confidence 67899999999885
No 383
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=273.56 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=216.4
Q ss_pred hccceeeeCccccceEEEEEECCCCc---EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~---~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..+|.++||.|.||.||+++-+..|+ .||||.++..-. +..+.+|..|+.++-+++||||+.+.++....+.+.||
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 34789999999999999999887765 599999976543 34456888999999999999999999999999999999
Q ss_pred Eeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
.|||+ |.|..+++...+.+..-+..-+++.|+.|+.||-++|++||||-..||||+.+...|++|||+++...++....
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 99998 79999999999999999999999999999999999999999999999999999999999999999875544222
Q ss_pred ccccc---CccccCcccccCccCCCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 169 THQVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 169 ~~~~~---~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
....| +.+|.|||.+.- ..++.+||+||+|++|||.| .|..|+=.....+.+..+.+++.-++|-+
T Consensus 789 ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmD--------- 858 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMD--------- 858 (996)
T ss_pred ccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCC---------
Confidence 22222 467999999866 77899999999999999987 67778877788888888888876666543
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
++..+.+|+..||++|-.+||...||+.
T Consensus 859 ------------------CP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 859 ------------------CPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred ------------------CcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 4889999999999999999999999875
No 384
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=262.25 Aligned_cols=247 Identities=26% Similarity=0.401 Sum_probs=204.3
Q ss_pred hhccceeeeCccccceEEEEEECC--CCc--EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTK--TGQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~--~~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
+..+..+.||+|.||.||.+.... .|+ -||+|.-+.+.... ...+|..|+.+++.++||||++++|++.+ ...|
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d-~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD-DTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChh-hHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 344667889999999999997543 233 58899887765443 46789999999999999999999999855 4579
Q ss_pred EEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
||||.++ |.|..+++..+..++......++.||..||+|||+.+++||||-..||+|....-|||+|||+++.+..+..
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 9999999 899999999988999999999999999999999999999999999999999999999999999998754332
Q ss_pred ccccccc--CccccCcccccCccCCCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCccc
Q 021299 167 RFTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLP 243 (314)
Q Consensus 167 ~~~~~~~--~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
+....| +.-|+|||.+.- ..++.++|||.+||++||++ .|..||.+....+.+..+..+...+
T Consensus 547 -YkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP------------ 612 (974)
T KOG4257|consen 547 -YKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP------------ 612 (974)
T ss_pred -hhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC------------
Confidence 222222 344999998854 67899999999999999985 7889998877777766665443222
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
.++.+++.+..|+.+||..||.+||+..++.
T Consensus 613 ---------------~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 613 ---------------CPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ---------------CCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 2346789999999999999999999988764
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=245.98 Aligned_cols=258 Identities=24% Similarity=0.378 Sum_probs=211.9
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchh-hHHHHHHHhhc-CCCCeeeeeceeccCCeEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFT-ALREIKLLKEL-KSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~-~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv 89 (314)
++|.++++||.|++..|.+++.+.+.+.||+|++++...+.+..-. ...|-.+.... +||.++-++.+|+.+...++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 6899999999999999999999999999999999876544332211 22455555555 689999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcc
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRF 168 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~ 168 (314)
.||++| +|.--++..+ .++++.++.+...|.-||.|||++||+++|||.+|++++..|.+||+|+|.++..-.+....
T Consensus 330 ieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~t 408 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT 408 (593)
T ss_pred EEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCccc
Confidence 999996 5554444333 59999999999999999999999999999999999999999999999999998876777777
Q ss_pred cccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCC-------CCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 169 THQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG-------SSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 169 ~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
....|||-|.|||++.+ ..|....|.|+||++|++||.|..||.- .+.++.+.+++-...-
T Consensus 409 stfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----------- 476 (593)
T KOG0695|consen 409 STFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----------- 476 (593)
T ss_pred ccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-----------
Confidence 78899999999999988 7789999999999999999999999932 2233333333222111
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC------HHHHhcCccccccC
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT------AQQALEHRFAKSFN 298 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~h~~~~~~~ 298 (314)
.++..+|-.+..+++..|.+||.+|.. ..++.+|+||+.++
T Consensus 477 ----------------riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 477 ----------------RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ----------------cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 122345778889999999999999975 47899999999774
No 386
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=261.13 Aligned_cols=243 Identities=24% Similarity=0.388 Sum_probs=206.5
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
+.+....||.|.+|.||.+.++...-.+++|.++-+.. ...+|.+|+.+++.+.|||+|++.++|..+..+|||+||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf 344 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF 344 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence 44667899999999999999999989999999875433 234788999999999999999999999999999999999
Q ss_pred cc-ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 93 ME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 93 ~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|. |+|++++.+.+ ..++.....+++.||..|+.||..++++|+||-..|.||.++..||+.|||+++.+..+. +..
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT--YTA 422 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT--YTA 422 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc--eec
Confidence 87 89999998654 457777889999999999999999999999999999999999999999999999885443 223
Q ss_pred ccc---CccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchh
Q 021299 171 QVF---ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYV 246 (314)
Q Consensus 171 ~~~---~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (314)
..| ..-|.|||.+.= ..++.++|||++||+||++.| |..|+++.+-...+..+..++.-..|
T Consensus 423 HAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~P------------- 488 (1157)
T KOG4278|consen 423 HAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGP------------- 488 (1157)
T ss_pred ccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCC-------------
Confidence 333 445999998854 568999999999999999985 55899988877777766555433333
Q ss_pred hhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHH
Q 021299 247 EYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQA 288 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 288 (314)
.++++.+.+|++.||++.|..||+.+|+
T Consensus 489 --------------eGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 489 --------------EGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred --------------CCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 3568999999999999999999999886
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=258.89 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=213.0
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
+.-.+.-.+++.||+|.||.|.+++-. .+..||+|.++...... ....+.+|+++|.+++||||+.++++|..++.++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~-~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKN-ARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchh-HHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 334567789999999999999999743 36899999998765433 3567889999999999999999999999999999
Q ss_pred EEEeccc-ccHHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC--C
Q 021299 88 LVFEFME-TDLETVIRNTNIFL-SPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG--S 163 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~~~l-~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~--~ 163 (314)
+++||++ |+|.+++.+...+. .......++.||++|++||.+.+++|+||.+.|+|++.++.+||+|||.++-.- +
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 9999998 79999998764433 556677899999999999999999999999999999999999999999998542 2
Q ss_pred CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH--hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL--NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 164 ~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
........+.+.+|+|+|.+.. ..++.++|+|++|+++||++ +...||....+.+.....-..+.......+..
T Consensus 692 yy~vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~--- 767 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLS--- 767 (807)
T ss_pred ceeeecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceecc---
Confidence 2333334455778999999877 67899999999999999986 55689988888777777655554444333221
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.++-++..+.+++.+||..|-.+||+.+++-.
T Consensus 768 -----------------~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 768 -----------------RPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred -----------------CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 12346889999999999999999999999843
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.6e-34 Score=259.39 Aligned_cols=270 Identities=24% Similarity=0.338 Sum_probs=182.4
Q ss_pred HhhccceeeeCccccceEEEEEEC----------------CCCcEEEEEEeecCCcccC------------cchhhHHHH
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT----------------KTGQTVAIKKIRLGKQKEG------------VNFTALREI 62 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~----------------~~~~~~~iK~~~~~~~~~~------------~~~~~~~e~ 62 (314)
.++|.+.++||+|+||+||++... ..+..|++|.+........ .......|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 578999999999999999998642 2346799999865432110 111223466
Q ss_pred HHHhhcCCCCe-----eeeeceecc--------CCeEEEEEecccc-cHHHHHHhCC-----------------------
Q 021299 63 KLLKELKSPHI-----IELIDAFPH--------KGNLHLVFEFMET-DLETVIRNTN----------------------- 105 (314)
Q Consensus 63 ~~l~~l~~~~i-----~~~~~~~~~--------~~~~~iv~e~~~g-~l~~~~~~~~----------------------- 105 (314)
.++..++|.++ +.+++++.. .+..++|+||+++ +|.+.+....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 67777766544 556666532 3568999999985 7777765321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC-cccccccCccccCccccc
Q 021299 106 IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR-RFTHQVFARWYRAPELLF 184 (314)
Q Consensus 106 ~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~sPE~~~ 184 (314)
..+++..+..++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||++........ ......+++.|+|||.+.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 1245677889999999999999999999999999999999999999999999976533211 111223478899999875
Q ss_pred CccC---------------------CCCcchHhhHHHHHHHHHhCCC-ccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 185 GAKQ---------------------YGAGVDVWAAGCIFAELLNRRP-FLQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 185 ~~~~---------------------~~~~~Di~slG~ll~~ll~g~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
.... ...+.|+||+||++++|+++.. ||.............. .....|...
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~----~~~~~~r~~--- 456 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYD----NDLNRWRMY--- 456 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhcc----chHHHHHhh---
Confidence 4211 1234799999999999999874 6643221111000000 000000000
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCC---CCCCCHHHHhcCcccc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDP---KARITAQQALEHRFAK 295 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rps~~ell~h~~~~ 295 (314)
... ...-..++.+++..++|+.+||..+| .+|+|++|+|+||||.
T Consensus 457 -------~~~-~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 457 -------KGQ-KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred -------ccc-CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 000 00011244569999999999999866 6899999999999995
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=258.26 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=216.2
Q ss_pred HhhccceeeeCccccceEEEEEECCC-Cc--EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKT-GQ--TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~-~~--~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 87 (314)
.++.+..+.||+|+||.|+++.++.. |+ .||+|.++...... ....|.+|+.++..|+|+|+++++++..+ ....
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 46778889999999999999987763 33 69999998876654 56688999999999999999999998866 6678
Q ss_pred EEEeccc-ccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 88 LVFEFME-TDLETVIRN-TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
+|||.+. |+|++.+.+ ....+.......++.||+.|+.||.+++++|+||-..|+++-....|||+|||+.+..+...
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999 689999987 46678888999999999999999999999999999999999888899999999999887766
Q ss_pred Cccccc---ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhC-CCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCc
Q 021299 166 RRFTHQ---VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 166 ~~~~~~---~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
..+... .-...|+|||.+.. ..++.++|+|++||++|||+++ ..||.+.....++..+-.+..-..
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpR--------- 336 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPR--------- 336 (1039)
T ss_pred cceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCC---------
Confidence 554322 22456999999987 7889999999999999999965 589999998888887753322211
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.+.+++.+.+++..||...|.+|||...|.+.-++...
T Consensus 337 ------------------Pk~csedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 337 ------------------PKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred ------------------CCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 23458999999999999999999999999876665543
No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.4e-34 Score=282.19 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=186.5
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
+.+.+...+.||+|++|.||+|.+..+|..|++|.+..... ....|++.+++++||||+++++++.+.+..++|
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEE
Confidence 45678888999999999999999988999999998864321 112568899999999999999999999999999
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH---KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD 165 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh---~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~ 165 (314)
|||++| +|.+.+.. +++..+..++.|++.|++||| +.+++|+||||+||+++.++..++. ++.......
T Consensus 762 ~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-- 834 (968)
T PLN00113 762 HEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-- 834 (968)
T ss_pred EeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--
Confidence 999985 78877753 789999999999999999999 6699999999999999988887775 554432211
Q ss_pred CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcH-HHHHHHHHhhC-CCCCCCCCCcCccc
Q 021299 166 RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFG-TATPSQWPDLAYLP 243 (314)
Q Consensus 166 ~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~ 243 (314)
.....+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ....+...... ......+-+
T Consensus 835 --~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 906 (968)
T PLN00113 835 --DTKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWID----- 906 (968)
T ss_pred --CCCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeC-----
Confidence 122357788999999876 66899999999999999999999998542211 11111111100 000000000
Q ss_pred chhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 244 DYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
..... ..........++.+++.+||+.||++||+++|+++.
T Consensus 907 ------~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 907 ------PSIRG-DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ------ccccC-CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00000 000001113357899999999999999999999865
No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=1.4e-34 Score=245.86 Aligned_cols=283 Identities=31% Similarity=0.508 Sum_probs=216.8
Q ss_pred HHHHhhccceeeeCccccceEEEEEECC---CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccC
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTK---TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK 83 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 83 (314)
.++.+.|..+..||+|.|++||++.+.. .+..+++|.+....... .+..|+++|..+. +.||+++.+++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----RILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch----HHHHHHHHHHHhccchhhhcchhhhccC
Confidence 3567899999999999999999998777 67789999997665433 4668999999995 89999999999999
Q ss_pred CeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeee
Q 021299 84 GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIF 161 (314)
Q Consensus 84 ~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~ 161 (314)
+.+.+|+||++. ...++... ++...+..++..++.||+++|++||+|+||||.||+.+.. ++-.|+|||++...
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999996 55555553 6789999999999999999999999999999999999865 68999999999621
Q ss_pred CC----------------C----------------------------CCcccccccCccccCcccccCccCCCCcchHhh
Q 021299 162 GS----------------P----------------------------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWA 197 (314)
Q Consensus 162 ~~----------------~----------------------------~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~s 197 (314)
.. + ........||++|.|||++.....-+.+.||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 00 0 000112357888999999988777799999999
Q ss_pred HHHHHHHHHhCCCcc-CCCCcHHHHHHHHHhhCCCCCCCCCCc---------Ccccch----hhhccc---c----C---
Q 021299 198 AGCIFAELLNRRPFL-QGSSDIDQLGKIFAAFGTATPSQWPDL---------AYLPDY----VEYQYV---A----A--- 253 (314)
Q Consensus 198 lG~ll~~ll~g~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~---~----~--- 253 (314)
.|+|++.++++..|| ...++.+.+.++.-.++...-...... ...+.. ..+... . .
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 999999999998665 667777777776666554432221100 000000 000000 0 0
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..........+..+.+|+.+||+.||.+|.|+++.|.||||....
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 112223345677899999999999999999999999999999664
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=267.69 Aligned_cols=254 Identities=27% Similarity=0.397 Sum_probs=194.4
Q ss_pred ccceeeeCccccce-EEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEEe
Q 021299 14 YLKREVLGEGTYGV-VYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 14 y~~~~~lg~g~~g~-vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e 91 (314)
|.-.+.+|.|+.|+ ||++. ..|+.||+|.+-.... ....+|+..++.-+ ||||+++++.-.+..+.||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e~~-----~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEEFF-----DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhhHhH-----HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44556789999876 48884 4578999999864432 23458999999884 9999999999889999999999
Q ss_pred cccccHHHHHHhCCC--C-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec---C--CcEEEeeccceeeeCC
Q 021299 92 FMETDLETVIRNTNI--F-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---H--GQLKLADFGLARIFGS 163 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~--~-l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~---~--~~~~l~df~~~~~~~~ 163 (314)
.|..+|.+++..... . ......+.+..|++.||+|||+.+|+||||||.||||.. + .+++|+|||+|+....
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999999999987411 1 111446889999999999999999999999999999976 2 3799999999998755
Q ss_pred CCCc---ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhC-CCccCCCCcHHHHHHHHHhhCCCCCCCCCCc
Q 021299 164 PDRR---FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPSQWPDL 239 (314)
Q Consensus 164 ~~~~---~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
.... .....||..|+|||.+.. ...+.+.|||||||++|+.++| .+||...-.-+ +.+..+ ......+
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~--~~~L~~L--- 735 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTG--NYTLVHL--- 735 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcC--ccceeee---
Confidence 4332 345678899999999987 4557799999999999999887 69997643221 112111 1111111
Q ss_pred CcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCccee
Q 021299 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNGVFV 302 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 302 (314)
.+....++.+||.+|+..||..||+|.+||.||+|=...++..
T Consensus 736 --------------------~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~ 778 (903)
T KOG1027|consen 736 --------------------EPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLS 778 (903)
T ss_pred --------------------ccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHH
Confidence 0111228999999999999999999999999999976655543
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=8.3e-32 Score=220.83 Aligned_cols=213 Identities=39% Similarity=0.649 Sum_probs=185.3
Q ss_pred eCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc-ccHH
Q 021299 20 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLE 98 (314)
Q Consensus 20 lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~-g~l~ 98 (314)
||+|++|.||++....+++.+++|.+....... ....+.+|++.++.++|++++++++++......++++|+++ +++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999988889999999998664432 23467789999999999999999999998899999999999 5888
Q ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-CCcEEEeeccceeeeCCCCCcccccccCccc
Q 021299 99 TVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARIFGSPDRRFTHQVFARWY 177 (314)
Q Consensus 99 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y 177 (314)
+.+......++...++.++.+++.++.+||+.|++|+||+|.||+++. ++.++|+||+.+..............+...|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence 887765456899999999999999999999999999999999999999 8999999999998765443223345567779
Q ss_pred cCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCC
Q 021299 178 RAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLR 257 (314)
Q Consensus 178 ~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (314)
++||.+......+.++|+|++|++++++
T Consensus 160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------------- 187 (215)
T cd00180 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------------- 187 (215)
T ss_pred cChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------------
Confidence 9999987743778999999999999999
Q ss_pred ccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCc
Q 021299 258 SLFPSASDDALDLLSKMFTYDPKARITAQQALEHR 292 (314)
Q Consensus 258 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 292 (314)
..+.+++.+|++.+|++||+++++++|+
T Consensus 188 -------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2588999999999999999999999875
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=215.88 Aligned_cols=214 Identities=27% Similarity=0.435 Sum_probs=175.8
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEEEE
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
+....+..||.|++|.|-+.++..+|...|+|.+..... .+...+...|+.+..+. .+|+++.+++.+-..+.++|.|
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 445567889999999999999999999999999977654 23334455677766655 5899999999988999999999
Q ss_pred ecccccHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC
Q 021299 91 EFMETDLETVIR---NTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR 166 (314)
Q Consensus 91 e~~~g~l~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~ 166 (314)
|.+.-++..+.. ..++.+++..+-+++..++.||.|||++ .++|||+||+|||++.+|+||+||||.+-..... .
T Consensus 125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-i 203 (282)
T KOG0984|consen 125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS-I 203 (282)
T ss_pred HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh-h
Confidence 999987766654 4677899999999999999999999985 8999999999999999999999999999876332 2
Q ss_pred cccccccCccccCcccccC---ccCCCCcchHhhHHHHHHHHHhCCCccCC-CCcHHHHHHHHHh
Q 021299 167 RFTHQVFARWYRAPELLFG---AKQYGAGVDVWAAGCIFAELLNRRPFLQG-SSDIDQLGKIFAA 227 (314)
Q Consensus 167 ~~~~~~~~~~y~sPE~~~~---~~~~~~~~Di~slG~ll~~ll~g~~pf~~-~~~~~~~~~~~~~ 227 (314)
..+...|-..|+|||.+.. +..|+.++||||||+.+.||.++..|+.. ..+.+++.+++..
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 2223456666999999854 34689999999999999999999988854 5667777766543
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-34 Score=249.15 Aligned_cols=198 Identities=30% Similarity=0.402 Sum_probs=172.8
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcch------hhHHHHHHHhhcC---CCCeeeeeceecc
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNF------TALREIKLLKELK---SPHIIELIDAFPH 82 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~------~~~~e~~~l~~l~---~~~i~~~~~~~~~ 82 (314)
.+|+.++.||+|+||.|++|.++.+...|++|-+.+.+.-.+.+. ..--|+++|.+++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 358999999999999999999999999999999987754333221 2235999999997 9999999999999
Q ss_pred CCeEEEEEeccc-c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 83 KGNLHLVFEFME-T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 83 ~~~~~iv~e~~~-g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
++++|++||..+ | +|.+++.... .+++..+..|++|++.|++|||+.||+|||||-+||.++.+|-+||+|||.+..
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhh
Confidence 999999999987 5 8888887554 599999999999999999999999999999999999999999999999999976
Q ss_pred eCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCcc
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFL 212 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf 212 (314)
..+ .......||..|.|||++.+..+....-|||+||++||.++....||
T Consensus 720 ~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 720 TKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred hcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 532 23345678999999999999888899999999999999998877765
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=255.21 Aligned_cols=264 Identities=27% Similarity=0.382 Sum_probs=221.9
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.++|..+..+|+|.+|.||+++++.+++..++|+++...... ..-+.+|+-+++..+||||+.+++.|......++.|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 588999999999999999999999999999999998765433 234558999999999999999999999999999999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
|||+|+.++.+-.-.+++++.++...++..+++++|||+.|=+|||||-.||+++..|.+|+.|||.+...+.--.+...
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 99998666666666778999999999999999999999999999999999999999999999999999877666666778
Q ss_pred cccCccccCccccc--CccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhh
Q 021299 171 QVFARWYRAPELLF--GAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEY 248 (314)
Q Consensus 171 ~~~~~~y~sPE~~~--~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
.+||+.|+|||+-. ....|+..+|+|++|+...++-..++|-....+...+..+..- ...|..+.+-
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS--~~qpp~lkDk--------- 240 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS--GFQPPTLKDK--------- 240 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc--CCCCCcccCC---------
Confidence 89999999999853 3356899999999999999999888877666666555544322 1112222111
Q ss_pred ccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 249 QYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
...++.+.+|++.+|.++|.+||+++.+|.|||...--+
T Consensus 241 ------------~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~ 279 (829)
T KOG0576|consen 241 ------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLS 279 (829)
T ss_pred ------------ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchh
Confidence 123889999999999999999999999999999987543
No 397
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-32 Score=249.27 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=207.9
Q ss_pred hccceeeeCccccceEEEEEECCCCc----EEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQ----TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i 88 (314)
+.+..++||+|+||+||++.+-..|+ +|++|++.... ......++.+|+-++..++|||++++++++..+. ..+
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 34567899999999999999877765 57777775443 3334567889999999999999999999986665 789
Q ss_pred EEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
|+++++ |+|+++++..+..+-......|..||++|+.|||.++++||||-..||||..-..+||+|||+++....+...
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 999999 6999999998888999999999999999999999999999999999999999999999999999988766665
Q ss_pred cccccc--CccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccc
Q 021299 168 FTHQVF--ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPD 244 (314)
Q Consensus 168 ~~~~~~--~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
.....| .+-|+|-|.+.. ..++.++||||+||.+||+|| |..|+.+....++...+..+..-..
T Consensus 855 y~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsq------------ 921 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQ------------ 921 (1177)
T ss_pred ccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCC------------
Confidence 555544 344899888866 788999999999999999985 6688888887777766655433211
Q ss_pred hhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 245 YVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
.+..+-++..++.+||..|+..||+++++.+
T Consensus 922 ---------------PpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 922 ---------------PPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ---------------CCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 2356889999999999999999999998753
No 398
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-33 Score=224.16 Aligned_cols=260 Identities=27% Similarity=0.355 Sum_probs=200.2
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeec-eeccCCeEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELID-AFPHKGNLH 87 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~-~~~~~~~~~ 87 (314)
+.|+|.|.+.||+|.||.+-+++|+.+..++++|.+..... ...++.+|..---.+. |.||+..++ .|+..+.++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 57999999999999999999999999999999999976543 2346677777666664 899998777 578889999
Q ss_pred EEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC--CcEEEeeccceeeeCCC
Q 021299 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH--GQLKLADFGLARIFGSP 164 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~--~~~~l~df~~~~~~~~~ 164 (314)
+++||++ |+|.+.+...+ +-+.....++.|+++|+.|||+++++|||||.+||||-.. .++||||||.....+.-
T Consensus 99 F~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred EeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999 79999887755 8899999999999999999999999999999999999533 48999999999765432
Q ss_pred CCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHH-HHHHHHhhCCCCCCCCCCc
Q 021299 165 DRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQ-LGKIFAAFGTATPSQWPDL 239 (314)
Q Consensus 165 ~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (314)
-.. ......|.+||.... .....+.+|+|.||+++|.+++|.+||......+. ..+..+-
T Consensus 177 V~~---~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w------------ 241 (378)
T KOG1345|consen 177 VKY---LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW------------ 241 (378)
T ss_pred ehh---hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH------------
Confidence 211 112333899997642 22347889999999999999999999964221111 1111111
Q ss_pred CcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCC---CCHHHHhcCccccccC
Q 021299 240 AYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR---ITAQQALEHRFAKSFN 298 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---ps~~ell~h~~~~~~~ 298 (314)
.....+..+..+..+++.+..++++-|..+|.+| .+++......|..+.-
T Consensus 242 ---------~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i 294 (378)
T KOG1345|consen 242 ---------LKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLI 294 (378)
T ss_pred ---------hcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhh
Confidence 1112223344456679999999999999999999 7777777788877653
No 399
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-31 Score=249.54 Aligned_cols=248 Identities=27% Similarity=0.411 Sum_probs=198.9
Q ss_pred hccceeeeCccccceEEEEEECC---C----CcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCC
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTK---T----GQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKG 84 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~---~----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 84 (314)
+..+.+.||+|+||.|+++.-.. . ...||+|.++..... .....+..|+++++.+. |+||+.+.+.+...+
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 33566799999999999996331 1 347999988766554 45567789999999994 999999999998889
Q ss_pred eEEEEEeccc-ccHHHHHHhCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC
Q 021299 85 NLHLVFEFME-TDLETVIRNTN---------------IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG 148 (314)
Q Consensus 85 ~~~iv~e~~~-g~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~ 148 (314)
..+++.||+. |+|+.++...+ ..++......++.||+.|++||++.+++||||-..||++..+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK 455 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence 9999999998 79999998776 3488899999999999999999999999999999999999999
Q ss_pred cEEEeeccceeeeCCCCCcc-cccc--cCccccCcccccCccCCCCcchHhhHHHHHHHHHhC-CCccCCCC-cHHHHHH
Q 021299 149 QLKLADFGLARIFGSPDRRF-THQV--FARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSS-DIDQLGK 223 (314)
Q Consensus 149 ~~~l~df~~~~~~~~~~~~~-~~~~--~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~-~~~~~~~ 223 (314)
.+||+|||+++.......-. .... -+..|+|||.+.. ..++.++||||+|++|||+++. ..|+.+.. ..+....
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~ 534 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF 534 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH
Confidence 99999999998643322111 1122 2444999999988 8899999999999999999865 58887755 4444443
Q ss_pred HHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 224 IFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
+..+..-..| ..+++++.++++.||..+|++||+..++.
T Consensus 535 l~~G~r~~~P---------------------------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 535 LKEGNRMEQP---------------------------EHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HhcCCCCCCC---------------------------CCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 4443222222 24589999999999999999999998875
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=228.05 Aligned_cols=189 Identities=26% Similarity=0.376 Sum_probs=154.0
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHH--HHHHHhhcCCCCeeeeeceeccC---
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR--EIKLLKELKSPHIIELIDAFPHK--- 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~--e~~~l~~l~~~~i~~~~~~~~~~--- 83 (314)
.+..+..+.+.||+|.||.||++.+. |+.||+|++..... . ...+ |+.....++|+||+.+++.--.+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--R---SWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc--CCceEEEEecccch--h---hhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 45788999999999999999999655 88999999975432 1 2334 44555556999999999874222
Q ss_pred -CeEEEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCcccCCCCCCceEEecCCcEEEe
Q 021299 84 -GNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK--------KWVLHRDMKPNNLLIGSHGQLKLA 153 (314)
Q Consensus 84 -~~~~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~--------~~i~H~di~~~nil~~~~~~~~l~ 153 (314)
...++|++|.+ |+|.+++.... ++-+....++..++.||+|||. -.|+|||||..||+|..++..-|+
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 26799999998 89999998854 8999999999999999999994 249999999999999999999999
Q ss_pred eccceeeeCCCC----CcccccccCccccCcccccCccCC----C-CcchHhhHHHHHHHHH
Q 021299 154 DFGLARIFGSPD----RRFTHQVFARWYRAPELLFGAKQY----G-AGVDVWAAGCIFAELL 206 (314)
Q Consensus 154 df~~~~~~~~~~----~~~~~~~~~~~y~sPE~~~~~~~~----~-~~~Di~slG~ll~~ll 206 (314)
|+|+|....... ......+||.+|||||++...... + ..+||||+|+++||+.
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia 420 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA 420 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence 999998765442 234456899999999999653322 2 5689999999999987
No 401
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=230.44 Aligned_cols=190 Identities=28% Similarity=0.375 Sum_probs=154.6
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHh--hcCCCCeeeeeceeccCC----e
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLK--ELKSPHIIELIDAFPHKG----N 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~--~l~~~~i~~~~~~~~~~~----~ 85 (314)
+.....+++|+|.||.||+|+ -+++.||||++..... ..+.+|-++.+ .+.|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~k-----qs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQEK-----QSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHHHH-----HHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 345677899999999999995 4568999999975432 24445555554 457999999998754433 7
Q ss_pred EEEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---------CCcccCCCCCCceEEecCCcEEEeec
Q 021299 86 LHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK---------KWVLHRDMKPNNLLIGSHGQLKLADF 155 (314)
Q Consensus 86 ~~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~---------~~i~H~di~~~nil~~~~~~~~l~df 155 (314)
+++|++|.+ |+|.+++.... +++.....++..+++||+|||+ ..|+|||||..||||..|+...|+||
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 899999998 79999998776 8999999999999999999995 45999999999999999999999999
Q ss_pred cceeeeCCC--CCcccccccCccccCcccccCccCCC-----CcchHhhHHHHHHHHHhCCC
Q 021299 156 GLARIFGSP--DRRFTHQVFARWYRAPELLFGAKQYG-----AGVDVWAAGCIFAELLNRRP 210 (314)
Q Consensus 156 ~~~~~~~~~--~~~~~~~~~~~~y~sPE~~~~~~~~~-----~~~Di~slG~ll~~ll~g~~ 210 (314)
|+|..+... ....-..+||.+|||||++.+...+. .+.||||+|++||||++...
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~ 422 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT 422 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999887432 22333478999999999998744443 56899999999999997653
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.2e-29 Score=210.75 Aligned_cols=211 Identities=37% Similarity=0.556 Sum_probs=176.3
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecc
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
|.+.+.||+|++|.||++....+++.+++|.+...... .....+.+|++.++.++|+|++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 67889999999999999999888899999999865443 12346668999999999999999999998889999999999
Q ss_pred cc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-Cccccc
Q 021299 94 ET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD-RRFTHQ 171 (314)
Q Consensus 94 ~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~ 171 (314)
++ +|.+.+......+++..++.++.+++.++.+||+++++|+||+|.||+++.++.++|+|||.+....... ......
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 97 8888887655448899999999999999999999999999999999999999999999999998765432 122334
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCC--CCcHHHHHHHH
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQG--SSDIDQLGKIF 225 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~--~~~~~~~~~~~ 225 (314)
.++..|++||.+.+...++.++|+|+||+++++|++|..||.. .+.......+.
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 5667799999884336677899999999999999999999976 33334444443
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=5.3e-31 Score=256.38 Aligned_cols=201 Identities=14% Similarity=0.197 Sum_probs=146.6
Q ss_pred hcCC-CCeeeeecee-------ccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Q 021299 67 ELKS-PHIIELIDAF-------PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138 (314)
Q Consensus 67 ~l~~-~~i~~~~~~~-------~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~ 138 (314)
.++| .||+.+.+++ .....++.++|+++++|.+++......+++..+..++.||+.||.|||++||+|+|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 4455 5777777776 2234677889999999999998766679999999999999999999999999999999
Q ss_pred CCceEEecCCc-------------------EEEeeccceeeeCCCC----------------CcccccccCccccCcccc
Q 021299 139 PNNLLIGSHGQ-------------------LKLADFGLARIFGSPD----------------RRFTHQVFARWYRAPELL 183 (314)
Q Consensus 139 ~~nil~~~~~~-------------------~~l~df~~~~~~~~~~----------------~~~~~~~~~~~y~sPE~~ 183 (314)
|+|||++..+. +|++|||++....... .......+|++|+|||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 99999965444 4555555554211000 000113478889999998
Q ss_pred cCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCC
Q 021299 184 FGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSA 263 (314)
Q Consensus 184 ~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (314)
.+ ..++.++|||||||+||||++|.+|+.... .....+.... .+.. ....
T Consensus 188 ~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~---~~~~------------------------~~~~ 237 (793)
T PLN00181 188 NG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV---LPPQ------------------------ILLN 237 (793)
T ss_pred cc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh---cChh------------------------hhhc
Confidence 77 567999999999999999999988765322 1122221111 0000 0011
Q ss_pred CHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 264 SDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 264 ~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
.+...+++.+||..+|.+||++.|+++||||...
T Consensus 238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 238 WPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 4456789999999999999999999999999864
No 404
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-30 Score=216.48 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=200.5
Q ss_pred HhhccceeeeCccccceEEEEEECCCC-----cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeecee-ccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-----QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF-PHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~ 84 (314)
.+|++....+.+|.||.||.+++...+ +.+.+|..+.+....+ ...+.+|.-.+..+.|||++++.++. ++..
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQ-v~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQ-VNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHH-HHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 477888899999999999999766433 2456666544332222 22455788888889999999999976 5566
Q ss_pred eEEEEEeccc-ccHHHHHHh-----CC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeecc
Q 021299 85 NLHLVFEFME-TDLETVIRN-----TN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFG 156 (314)
Q Consensus 85 ~~~iv~e~~~-g~l~~~~~~-----~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~ 156 (314)
..+.++++.+ |+|..++.. .. ..++.-+...++.|++.|++|||++|++|.||-..|.++++.-+|||+|=.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 7889999998 799888872 21 246677889999999999999999999999999999999999999999999
Q ss_pred ceeeeCCCCCccc--ccccCccccCcccccCccCCCCcchHhhHHHHHHHHHh-CCCccCCCCcHHHHHHHHHhhCCCCC
Q 021299 157 LARIFGSPDRRFT--HQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLN-RRPFLQGSSDIDQLGKIFAAFGTATP 233 (314)
Q Consensus 157 ~~~~~~~~~~~~~--~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 233 (314)
+++.........- ....+..|+|||.+.. ..++.++|+||||++||||+| |+.|+...++.+....+..+..-..|
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP 520 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP 520 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCC
Confidence 9987644332211 1122445999999977 779999999999999999985 66999999999998888877554444
Q ss_pred CCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhc
Q 021299 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALE 290 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 290 (314)
. ++++++..++.-||..+|++||+.+|+..
T Consensus 521 ~---------------------------NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 521 F---------------------------NCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred C---------------------------CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 4 45889999999999999999999999864
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=6.5e-29 Score=199.02 Aligned_cols=167 Identities=20% Similarity=0.257 Sum_probs=130.4
Q ss_pred ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccC
Q 021299 95 TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFA 174 (314)
Q Consensus 95 g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 174 (314)
|+|.+.+...+..+++..++.++.|++.||.|||+++ ||+||+++.++.+++ ||.+....... ..++
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~ 67 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVD 67 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc-----CCCc
Confidence 6788888877777999999999999999999999998 999999999999999 99998764422 2578
Q ss_pred ccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcH-HHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 175 RWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDI-DQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 175 ~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
+.|+|||.+.+ ..++.++||||||+++|+|++|..||...... .....+........+...+
T Consensus 68 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 130 (176)
T smart00750 68 PYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS---------------- 130 (176)
T ss_pred ccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc----------------
Confidence 89999999977 66889999999999999999999999765432 2233332221111111000
Q ss_pred CCCCccCCCCCH--HHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 254 PPLRSLFPSASD--DALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 254 ~~~~~~~~~~~~--~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
....++. ++.++|.+||..+|.+||++.|+++|+|+..
T Consensus 131 -----~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 131 -----NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred -----cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0011233 6999999999999999999999999999863
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.1e-29 Score=231.60 Aligned_cols=267 Identities=26% Similarity=0.373 Sum_probs=202.5
Q ss_pred hhc-cceeeeCccccceEEEEEECCCCcEEEEEEeecC----CcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeE
Q 021299 12 DRY-LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG----KQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNL 86 (314)
Q Consensus 12 ~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 86 (314)
+.| .....+|.|++|.|+.+......+.+..|.+... .........+..|+-+-..+.|+|++.......+....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~ 396 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI 396 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence 345 5678899999998888877776666777766522 11111111233566667778999998888877666655
Q ss_pred EEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCC-
Q 021299 87 HLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPD- 165 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~- 165 (314)
.-.||||+++|...+... +.+....+-.++.|++.|+.|||+.|+.|+|+|++|+++..+|.+||+|||.+..+..+.
T Consensus 397 ~~~mE~~~~Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 397 LQSMEYCPYDLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhhhhcccHHHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 555999999888877765 358888999999999999999999999999999999999999999999999998764432
Q ss_pred ---CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHH-HHHHhhCCCCCCCCCCcCc
Q 021299 166 ---RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLG-KIFAAFGTATPSQWPDLAY 241 (314)
Q Consensus 166 ---~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (314)
....+..|+..|+|||.+.+..+.....||||.|++++-|.+|+.||......+... .... ...
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~----------~~~-- 543 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY----------SDQ-- 543 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc----------ccc--
Confidence 334566788889999999886677889999999999999999999997655443321 0000 000
Q ss_pred ccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccCc
Q 021299 242 LPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFNG 299 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 299 (314)
.........++..++.+.+.+|.+||+.||.+|.|+++|++.+||+++..
T Consensus 544 --------~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 544 --------RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred --------cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 00011112234457889999999999999999999999999999998764
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-25 Score=195.76 Aligned_cols=253 Identities=22% Similarity=0.232 Sum_probs=193.9
Q ss_pred hccceeeeCccccceEEEEEECCCC-cEEEEEEeecCCcccCcchhhHHHHHHHhhcC----CCCeeeeecee-ccCCeE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELK----SPHIIELIDAF-PHKGNL 86 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~-~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~ 86 (314)
+|++.+.||+|+||.||.+.+..++ ..+|+|........... .+..|..+++.+. .+++..+++.. ..+.+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999987764 57888887665333221 3446788888876 36899999988 578899
Q ss_pred EEEEecccccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-----CcEEEeecccee-
Q 021299 87 HLVFEFMETDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-----GQLKLADFGLAR- 159 (314)
Q Consensus 87 ~iv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-----~~~~l~df~~~~- 159 (314)
++||+.++.+|.++..... +.++...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+++
T Consensus 97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 9999999999999886654 789999999999999999999999999999999999999765 369999999998
Q ss_pred -eeC-CCC------Cc-ccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCC
Q 021299 160 -IFG-SPD------RR-FTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGT 230 (314)
Q Consensus 160 -~~~-~~~------~~-~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 230 (314)
... ... .. .....||..|+|+....+ ...+++.|+||++.++.+++.|..||...........+......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence 321 111 11 223458999999998877 66799999999999999999999999776654444443332211
Q ss_pred CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
..... .....+.++.++...+-..+...+|.-..+...
T Consensus 256 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 256 LLTDR-----------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hcccc-----------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 11110 111235677777777777888889988776443
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-26 Score=182.47 Aligned_cols=216 Identities=22% Similarity=0.310 Sum_probs=179.4
Q ss_pred cccccHHH-HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC-CCeeeeecee
Q 021299 3 EVDLSKKV-ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAF 80 (314)
Q Consensus 3 ~~~~~~~~-~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~ 80 (314)
..++++.| ++.|++++.||+|+||.+|++....+|+.||+|.-......++. ..|..+.+.+++ .+|..+..+.
T Consensus 5 ~~s~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL----~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 5 SGSLEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQL----LYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred ccchhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcch----hHHHHHHHHhccCCCCchhhhhc
Confidence 34556666 79999999999999999999999999999999998776655543 368888888875 7787777788
Q ss_pred ccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec---CCcEEEeeccc
Q 021299 81 PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS---HGQLKLADFGL 157 (314)
Q Consensus 81 ~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~---~~~~~l~df~~ 157 (314)
.+..+..+||+..+.+|.+++.--...++...+..++.|++.-++|+|.++++|+||||+|+++.- ..++.++|||+
T Consensus 81 ~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 81 TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence 888899999999999999988766667999999999999999999999999999999999999954 46899999999
Q ss_pred eeeeCC-------CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHH
Q 021299 158 ARIFGS-------PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGK 223 (314)
Q Consensus 158 ~~~~~~-------~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~ 223 (314)
++..-+ +........||.+|.|-....+ ..-+...|+-|+|.+|.++.-|..||.+.........
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK 232 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK 232 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH
Confidence 986532 2223345678888999876655 3448899999999999999999999988665554443
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=1.9e-23 Score=182.67 Aligned_cols=262 Identities=32% Similarity=0.504 Sum_probs=205.9
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcCCC-CeeeeeceeccCCeEEEEEe
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELKSP-HIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~iv~e 91 (314)
|.+.+.||.|+++.||.+.+. ..+++|.+........ ....+.+|+..+..+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999876 7889999887765543 455677899999999988 79999999977777899999
Q ss_pred cccc-cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-cEEEeeccceeeeCCCCC-
Q 021299 92 FMET-DLETVIRNTN--IFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGSPDR- 166 (314)
Q Consensus 92 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~~~~- 166 (314)
++.| .+...+.... ..++...+..++.|++.++.++|+.+++|+|+||+||+++..+ .++++|||.+........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9997 5664444433 2689999999999999999999999999999999999999988 799999999986544332
Q ss_pred -----cccccccCccccCcccccCc--cCCCCcchHhhHHHHHHHHHhCCCccCCCCc---HHHHHHHHHhhCCC-CCCC
Q 021299 167 -----RFTHQVFARWYRAPELLFGA--KQYGAGVDVWAAGCIFAELLNRRPFLQGSSD---IDQLGKIFAAFGTA-TPSQ 235 (314)
Q Consensus 167 -----~~~~~~~~~~y~sPE~~~~~--~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~---~~~~~~~~~~~~~~-~~~~ 235 (314)
......++..|.+||.+.+. .......|+||+|++++++++|..||..... .............. ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 23566789999999999774 5789999999999999999999999877764 33333333332222 1111
Q ss_pred CCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 236 WPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
...... ......+.+++..++..+|..|.+..+...++|....
T Consensus 239 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 239 LSPSNP-------------------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cCcccc-------------------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 100000 1124679999999999999999999999988666644
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=1.7e-24 Score=189.56 Aligned_cols=167 Identities=23% Similarity=0.318 Sum_probs=126.3
Q ss_pred HHHhhccceeeeCccccceEEEEEECC-CCcEEEEEEeecCCc---ccCcchhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQ---KEGVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
.+.++|.+.+.||+|+||+||+|.+.. ++..+++|++..... .......+.+|+++++.++|+|+++.+..+ +
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence 457899999999999999999998876 677789998753311 112234567999999999999998533222 4
Q ss_pred eEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC-CCCceEEecCCcEEEeeccceeeeCC
Q 021299 85 NLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 85 ~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di-~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
..++||||+.|..+.... . .. ...++.+++.+|.+||++|++|+|| ||+||+++.++.++|+|||++.....
T Consensus 92 ~~~LVmE~~~G~~L~~~~-~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLAR-P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred CcEEEEEccCCCCHHHhC-c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 579999999974443321 1 11 1467899999999999999999999 99999999999999999999987654
Q ss_pred CCCcc--------cccccCccccCcccccC
Q 021299 164 PDRRF--------THQVFARWYRAPELLFG 185 (314)
Q Consensus 164 ~~~~~--------~~~~~~~~y~sPE~~~~ 185 (314)
..... ....+++.|.+||.+..
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 33221 12345667899998753
No 411
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=1.3e-24 Score=182.82 Aligned_cols=235 Identities=20% Similarity=0.260 Sum_probs=149.8
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchhhHHHHHHHhhcC----------CCCeeeeecee-
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFTALREIKLLKELK----------SPHIIELIDAF- 80 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~~~e~~~l~~l~----------~~~i~~~~~~~- 80 (314)
..+..+.||.|+++.||.+.+..+|+.+++|++........ ....+.+|.-....+. |-.++..++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45678899999999999999999999999999877663222 2223333332332221 11222222221
Q ss_pred --------c---cCC-----eEEEEEecccccHHHHHHh---CCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Q 021299 81 --------P---HKG-----NLHLVFEFMETDLETVIRN---TNI---FLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK 138 (314)
Q Consensus 81 --------~---~~~-----~~~iv~e~~~g~l~~~~~~---~~~---~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~ 138 (314)
. ... ..+++|+.+.++|...+.. ... .+.......+-.|+++.+++||+.|++|+||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1 111 2478899999988777642 211 12233345566899999999999999999999
Q ss_pred CCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCcccccCc-------cCCCCcchHhhHHHHHHHHHhCCCc
Q 021299 139 PNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGA-------KQYGAGVDVWAAGCIFAELLNRRPF 211 (314)
Q Consensus 139 ~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~-------~~~~~~~Di~slG~ll~~ll~g~~p 211 (314)
|+|++++.+|.++|+||+.....+..... ...+..|.|||..... ..++.+.|.|+||+++|.|+++..|
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 99999999999999999988765443221 3445669999976432 2468899999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCC
Q 021299 212 LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282 (314)
Q Consensus 212 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 282 (314)
|........... .+.... ++++.++.||..+|+.+|++|
T Consensus 250 f~~~~~~~~~~~-------------------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEADPEW-------------------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGSTSGG-------------------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCccccccc-------------------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 976432221110 112222 569999999999999999988
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.6e-24 Score=173.32 Aligned_cols=245 Identities=15% Similarity=0.192 Sum_probs=194.5
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.+......|.+.-.|..|++++. |..+++|++.........-+.|.+|.-.++-+.||||+++++.+....+..++..
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 34456667888889999999654 6678999998888777777788899999999999999999999999999999999
Q ss_pred ccc-ccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCceEEecCCcEEEeeccceeeeCCCCCc
Q 021299 92 FME-TDLETVIRNTN-IFLSPADIKSYMQMTLKGLAFCHKKW--VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 92 ~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~--i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~ 167 (314)
|++ |+|...+.+.. --++..++..++.++++|++|||+.. |....|+...++++++.+.+|. .+..++...
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfq---- 342 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQ---- 342 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeee----
Confidence 999 78888888764 35788899999999999999999964 4455689999999999877764 222222111
Q ss_pred ccccccCccccCcccccCccC--CCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 FTHQVFARWYRAPELLFGAKQ--YGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 ~~~~~~~~~y~sPE~~~~~~~--~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
..+....|.|+|||.+..... ...++|+||+++++|++.|...||....+-+..-.+.-.
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale------------------ 404 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE------------------ 404 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc------------------
Confidence 123445788999999865222 247899999999999999999999988877765554221
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
+....+.++++..+..|++-|+..||.+||....++
T Consensus 405 --------glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 405 --------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred --------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 122334567899999999999999999999987754
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=7.9e-24 Score=172.95 Aligned_cols=174 Identities=12% Similarity=0.086 Sum_probs=131.2
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc-hh------hHHHHHHHhhcCCCCeeeeecee
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN-FT------ALREIKLLKELKSPHIIELIDAF 80 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-~~------~~~e~~~l~~l~~~~i~~~~~~~ 80 (314)
+.|.++|+++++||.|+||.||++.+ ++..+|+|.+.......... .. +.+|++.+.++.|++|..+.+++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 45689999999999999999999754 46689999997654332211 11 45788899999999999998886
Q ss_pred ccC--------CeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 81 PHK--------GNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 81 ~~~--------~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
... +..+++|||++| +|.+.. .+++ ....+++.++..||+.|++|+|++|+||+++++| ++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 432 357899999998 565542 1333 3456999999999999999999999999999988 99
Q ss_pred EeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH
Q 021299 152 LADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (314)
Q Consensus 152 l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll 206 (314)
|+|||.......... -+.+.....+..++|+|+||+.+..+.
T Consensus 175 liDfg~~~~~~e~~a-------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKA-------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhh-------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 999998864421111 111222245668999999999877665
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=2.4e-23 Score=168.03 Aligned_cols=141 Identities=22% Similarity=0.215 Sum_probs=107.7
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-------ch-----------------hhHHHHHHHhhcCCCC
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-------NF-----------------TALREIKLLKELKSPH 72 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~-------~~-----------------~~~~e~~~l~~l~~~~ 72 (314)
.+.||+|++|.||+|.+. +|+.||+|+++........ .. ....|++.+..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 578999999999999986 8999999999876432211 00 1124889999998777
Q ss_pred eeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcccCCCCCCceEEecCCcEE
Q 021299 73 IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 73 i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~i~H~di~~~nil~~~~~~~~ 151 (314)
+.....+... ..++||||++|+.+.......+.+++..+..++.|++.+|.++ |+.|++|+||||+||+++ ++.++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 6443322222 2389999999853322222234689999999999999999999 799999999999999998 57899
Q ss_pred Eeeccceeee
Q 021299 152 LADFGLARIF 161 (314)
Q Consensus 152 l~df~~~~~~ 161 (314)
|+|||++...
T Consensus 158 LiDFG~a~~~ 167 (190)
T cd05147 158 IIDVSQSVEH 167 (190)
T ss_pred EEEccccccC
Confidence 9999999754
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-24 Score=194.21 Aligned_cols=240 Identities=28% Similarity=0.409 Sum_probs=192.7
Q ss_pred eeCccccceEEEEEEC---CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEEeccc
Q 021299 19 VLGEGTYGVVYKAIDT---KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~---~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
.+|.|++|.|++++.. ..|..|++|+..+.............|..++...+ ||.++.++..++.++..+++.++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 4799999999998532 34677999998776544443334446778888886 9999999999999999999999999
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccccc
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVF 173 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 173 (314)
| .+..-+.... ...+.....+...++-++.++|+.+++|+|+|++||+++.+|.+++.|||.++..-..... .|
T Consensus 81 gg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----cg 155 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----CG 155 (612)
T ss_pred cchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----cc
Confidence 7 5555554443 4667777778888888999999999999999999999999999999999999865332222 78
Q ss_pred CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccC
Q 021299 174 ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAA 253 (314)
Q Consensus 174 ~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
+..|+|||++. ......|.||+|+++++|++|..||.. ++...+...-..
T Consensus 156 t~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~----------------------- 205 (612)
T KOG0603|consen 156 TYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELE----------------------- 205 (612)
T ss_pred chhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccC-----------------------
Confidence 88999999996 347899999999999999999999987 455554432111
Q ss_pred CCCCccCCCCCHHHHHHHhhhcccCCCCCCCH-----HHHhcCccccccC
Q 021299 254 PPLRSLFPSASDDALDLLSKMFTYDPKARITA-----QQALEHRFAKSFN 298 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~h~~~~~~~ 298 (314)
....++.++.+++..++..+|.+|.-. .++++|+||++++
T Consensus 206 -----~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~ 250 (612)
T KOG0603|consen 206 -----MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSID 250 (612)
T ss_pred -----CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeee
Confidence 112458899999999999999999865 7899999999985
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-22 Score=168.15 Aligned_cols=210 Identities=22% Similarity=0.289 Sum_probs=177.4
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~i 88 (314)
.+-.|++.+.||.|+||.++.+...-+++.||||.-......++. ..|.+..+.|. .++|..++-+-+++.+..+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQL----rdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQL----RDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEeccccCCcchH----HHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 356799999999999999999998889999999998776655543 35777777774 7999999877788889999
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-----CcEEEeeccceeeeCC
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-----GQLKLADFGLARIFGS 163 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-----~~~~l~df~~~~~~~~ 163 (314)
|+|..+.+|.+++.--+..++...+..++.|++.-++++|++.++++||||+|+||... ..+.++|||.++..-.
T Consensus 102 VidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 99999999999988777789999999999999999999999999999999999999644 3699999999986533
Q ss_pred C-------CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHH
Q 021299 164 P-------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKI 224 (314)
Q Consensus 164 ~-------~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 224 (314)
+ ........||.+|||-....+ ..-+...|+-|||=++++.+-|..||.+........+.
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY 248 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY 248 (449)
T ss_pred ccccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH
Confidence 2 234456778999999888777 55689999999999999999999999887665555444
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=7.3e-24 Score=198.98 Aligned_cols=248 Identities=27% Similarity=0.341 Sum_probs=181.1
Q ss_pred hccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc--hhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 13 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--FTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 13 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~--~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
+|...+.||++.|=+|.++++.. | .+++|++-++....... ....++++ ...+++||.+++......++-.|+|-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 67889999999999999997543 3 59999998776433322 12224444 55568999999998888888889999
Q ss_pred ecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccc
Q 021299 91 EFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTH 170 (314)
Q Consensus 91 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 170 (314)
+|...+|.+.+..+. .+.+.....|+.|++.|+.-+|..|++|||||.+|||++.=+.+.|+||..-+..--+.++...
T Consensus 101 qyvkhnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad 179 (1431)
T KOG1240|consen 101 QYVKHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD 179 (1431)
T ss_pred HHHhhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence 999999999887554 5788888999999999999999999999999999999999999999999876533222222211
Q ss_pred -------cccCccccCcccccCc---------cC-CCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCC
Q 021299 171 -------QVFARWYRAPELLFGA---------KQ-YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTAT 232 (314)
Q Consensus 171 -------~~~~~~y~sPE~~~~~---------~~-~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~ 232 (314)
.....+|+|||.+... .. .+++-||||+||+++|++ .|.+||.-.+ +-....+. ...
T Consensus 180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ----L~aYr~~~-~~~ 254 (1431)
T KOG1240|consen 180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ----LLAYRSGN-ADD 254 (1431)
T ss_pred ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH----HHhHhccC-ccC
Confidence 1123459999998541 12 578899999999999997 4578885321 11111110 000
Q ss_pred CCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC
Q 021299 233 PSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH 291 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 291 (314)
++. . +. .--+..++.||..|++.||++|.++++.|+.
T Consensus 255 ~e~-----------~--------Le---~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQ-----------L--------LE---KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHH-----------H--------HH---hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 000 0 00 0014479999999999999999999999976
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.88 E-value=5.7e-23 Score=192.62 Aligned_cols=240 Identities=26% Similarity=0.380 Sum_probs=183.0
Q ss_pred HHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 10 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
..++|..++.+..|++|.||+++|+.+.+++++ ++.++..-. +. ++....+|.++
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~lil-------Rn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLIL-------RN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhh-cccccchhh-------hc--cccccCCccee---------------
Confidence 357899999999999999999999999999999 443322110 00 22222334433
Q ss_pred EecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCC-----
Q 021299 90 FEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSP----- 164 (314)
Q Consensus 90 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~----- 164 (314)
|+....++..+ .++.+. +.+++|||+.||+|+|+||+|.+|..-|..|++|||+++.....
T Consensus 136 -----gDc~tllk~~g-~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl 201 (1205)
T KOG0606|consen 136 -----GDCATLLKNIG-PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNL 201 (1205)
T ss_pred -----chhhhhcccCC-CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchh
Confidence 66555555443 344444 67999999999999999999999999999999999999653211
Q ss_pred ----------CCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 165 ----------DRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 165 ----------~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
........|||.|.|||++.. .-|....|.|+||+|+|+.+.|..||.+..+++.+...+......+..
T Consensus 202 ~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 202 KEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 111234578999999999877 668999999999999999999999999999999999988765555444
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCC---HHHHhcCccccccCcc---eeecccce
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARIT---AQQALEHRFAKSFNGV---FVFVDFCS 308 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~h~~~~~~~~~---~~~~~~~~ 308 (314)
++ .++++++++|.++|+.+|..|.- +-++..|+||+.++-. +-...+.+
T Consensus 281 de-------------------------a~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvp 335 (1205)
T KOG0606|consen 281 DE-------------------------ALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVP 335 (1205)
T ss_pred Cc-------------------------CCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccc
Confidence 32 34899999999999999999965 5778899999999755 55555555
Q ss_pred ecccCC
Q 021299 309 YLYSSN 314 (314)
Q Consensus 309 ~~~~~~ 314 (314)
.+.++|
T Consensus 336 ql~~ed 341 (1205)
T KOG0606|consen 336 QLESED 341 (1205)
T ss_pred cccccc
Confidence 555443
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=5.1e-22 Score=160.81 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=110.4
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc------------------------chhhHHHHHHHhhcCCC
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------------------------NFTALREIKLLKELKSP 71 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~~~ 71 (314)
+.+.||+|++|.||+|.+. +|+.||+|+++........ ......|.+.+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999999999876 8999999999876422110 01123688889999988
Q ss_pred CeeeeeceeccCCeEEEEEeccccc-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCc
Q 021299 72 HIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 72 ~i~~~~~~~~~~~~~~iv~e~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~ 149 (314)
++.....+.... .++||||++|. +...... ...++...+..++.|++.++.+||+ .|++|+||||+||+++ ++.
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 875444333222 47999999984 3333222 3457888999999999999999999 9999999999999998 889
Q ss_pred EEEeeccceeeeC
Q 021299 150 LKLADFGLARIFG 162 (314)
Q Consensus 150 ~~l~df~~~~~~~ 162 (314)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999998653
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=7.9e-22 Score=167.52 Aligned_cols=202 Identities=24% Similarity=0.284 Sum_probs=148.0
Q ss_pred CCCCeeeeeceecc---------------------------CCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHH
Q 021299 69 KSPHIIELIDAFPH---------------------------KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTL 121 (314)
Q Consensus 69 ~~~~i~~~~~~~~~---------------------------~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~ 121 (314)
+||||+.+.++|.+ +...|+||..++.+|..++..+. .+.....-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC--CchHHHHHHHHHHH
Confidence 58999999887733 34679999999999999998776 67778889999999
Q ss_pred HHHHHHHhCCcccCCCCCCceEEecCC----cEEEeeccceeeeCC------CCCcccccccCccccCcccccCccCC--
Q 021299 122 KGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGS------PDRRFTHQVFARWYRAPELLFGAKQY-- 189 (314)
Q Consensus 122 ~~l~~Lh~~~i~H~di~~~nil~~~~~----~~~l~df~~~~~~~~------~~~~~~~~~~~~~y~sPE~~~~~~~~-- 189 (314)
.|+.|||++|+.|+|+|.+||++.-+. .++|.|||+|-.-.. ..+......|.-.-+|||+...-..+
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 999999999999999999999995432 589999999853221 12233345566678999988541111
Q ss_pred ---CCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHH
Q 021299 190 ---GAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDD 266 (314)
Q Consensus 190 ---~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
=.++|.|+.|.+.||+++...||=..... +.+..+++.. .++.....+++.
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem-----------------------~L~~r~Yqe~---qLPalp~~vpp~ 485 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-----------------------LLDTRTYQES---QLPALPSRVPPV 485 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchh-----------------------eechhhhhhh---hCCCCcccCChH
Confidence 25899999999999999999888442111 1111111111 123334567999
Q ss_pred HHHHHhhhcccCCCCCCCHH---HHh------cCccccccC
Q 021299 267 ALDLLSKMFTYDPKARITAQ---QAL------EHRFAKSFN 298 (314)
Q Consensus 267 ~~~li~~~l~~dp~~Rps~~---ell------~h~~~~~~~ 298 (314)
+++++..+|+.||+||+++. .+| .|.|++++.
T Consensus 486 ~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka~~ 526 (598)
T KOG4158|consen 486 ARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKAMM 526 (598)
T ss_pred HHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchHHHHhc
Confidence 99999999999999999963 333 466666554
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=2.7e-20 Score=149.15 Aligned_cols=185 Identities=18% Similarity=0.139 Sum_probs=135.9
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC--cchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEEe
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--VNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.+...|++|+||+||++.. .+.+++.+.+........ ....+.+|+++++++. ++++..++++ +..+++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3678999999999998854 677888888766554322 2224668999999995 5788888875 44689999
Q ss_pred cccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC-CCCceEEecCCcEEEeeccceeeeCCCCCc---
Q 021299 92 FMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDM-KPNNLLIGSHGQLKLADFGLARIFGSPDRR--- 167 (314)
Q Consensus 92 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di-~~~nil~~~~~~~~l~df~~~~~~~~~~~~--- 167 (314)
|+.|..+..... .. ...++.|++.+|.++|++|++|+|| ||.||+++.++.++|+|||.+.........
T Consensus 79 yI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~ 151 (218)
T PRK12274 79 YLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL 151 (218)
T ss_pred eecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence 999854332211 11 1357889999999999999999999 799999999999999999999865433311
Q ss_pred -c-c--------ccccCccccCcccccCccCCC-CcchHhhHHHHHHHHHhCCCcc
Q 021299 168 -F-T--------HQVFARWYRAPELLFGAKQYG-AGVDVWAAGCIFAELLNRRPFL 212 (314)
Q Consensus 168 -~-~--------~~~~~~~y~sPE~~~~~~~~~-~~~Di~slG~ll~~ll~g~~pf 212 (314)
. . ....++.+++|+...--...+ ...+.++.|.-+|.++|+..++
T Consensus 152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 0 0 112356677777653322233 6778899999999999999665
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4.5e-20 Score=175.90 Aligned_cols=192 Identities=22% Similarity=0.328 Sum_probs=157.7
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC---CCCeeeeeceeccCCeEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLH 87 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~ 87 (314)
++.|-|.+.||.|++|.||+|.+.. |+.+|+|+-.....++.-. -.+++.+|+ -+.|..+...+...+..+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 5789999999999999999998777 9999999988777665322 223344444 345666666666677778
Q ss_pred EEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-------CCcEEEeecccee
Q 021299 88 LVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-------HGQLKLADFGLAR 159 (314)
Q Consensus 88 iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-------~~~~~l~df~~~~ 159 (314)
+|++|.+ |+|++++. ..+.+++..+..+..|++..+.+||..+|+|+||||+|+++-. +--++|+|||.+.
T Consensus 771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 9999998 79999988 4446999999999999999999999999999999999999942 2359999999997
Q ss_pred eeC--CCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCC
Q 021299 160 IFG--SPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRP 210 (314)
Q Consensus 160 ~~~--~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~ 210 (314)
.+. .+........+|-.+-.+|...+ .+++++.|.|.|+.+++-|+.|..
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence 662 34456667778888999998877 899999999999999999999884
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=3.9e-20 Score=154.31 Aligned_cols=151 Identities=20% Similarity=0.193 Sum_probs=112.8
Q ss_pred ccHHHHhh--ccceeeeCccccceEEEEE-ECCCCcEEEEEEeecCCcccC----------------------cchhhHH
Q 021299 6 LSKKVADR--YLKREVLGEGTYGVVYKAI-DTKTGQTVAIKKIRLGKQKEG----------------------VNFTALR 60 (314)
Q Consensus 6 ~~~~~~~~--y~~~~~lg~g~~g~vy~~~-~~~~~~~~~iK~~~~~~~~~~----------------------~~~~~~~ 60 (314)
+...+... |.+.+.||+|++|.||+|. +..+|..|++|.++....... .......
T Consensus 20 ~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (237)
T smart00090 20 LYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK 99 (237)
T ss_pred HHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence 33444444 8899999999999999998 667899999999986542110 0012347
Q ss_pred HHHHHhhcCCCC--eeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCC
Q 021299 61 EIKLLKELKSPH--IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKW-VLHRDM 137 (314)
Q Consensus 61 e~~~l~~l~~~~--i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~-i~H~di 137 (314)
|++.++.+.+.+ +.++++. ...++|||+++|..+..............+..++.|++.++.+||+.| ++|+||
T Consensus 100 E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Di 175 (237)
T smart00090 100 EFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDL 175 (237)
T ss_pred HHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCC
Confidence 999999987533 3344432 234799999998433322222334666778899999999999999999 999999
Q ss_pred CCCceEEecCCcEEEeeccceeee
Q 021299 138 KPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 138 ~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
||+||+++ +++++|+|||.+...
T Consensus 176 kp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred ChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999 889999999998754
No 424
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=9.2e-20 Score=162.96 Aligned_cols=207 Identities=24% Similarity=0.325 Sum_probs=156.3
Q ss_pred HhhcCCCCeeeeeceeccCCeEEEEEeccc-ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCCCce
Q 021299 65 LKELKSPHIIELIDAFPHKGNLHLVFEFME-TDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-LHRDMKPNNL 142 (314)
Q Consensus 65 l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i-~H~di~~~ni 142 (314)
++.+.|.|+.++++.+.++...++|.+||. |+|.+.+......++......++++|+.||+|||...+ .|+.++..|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 356889999999999988899999999998 79999998888889999999999999999999999866 9999999999
Q ss_pred EEecCCcEEEeeccceeeeCCC--CCcccccccCccccCcccccCcc------CCCCcchHhhHHHHHHHHHhCCCccCC
Q 021299 143 LIGSHGQLKLADFGLARIFGSP--DRRFTHQVFARWYRAPELLFGAK------QYGAGVDVWAAGCIFAELLNRRPFLQG 214 (314)
Q Consensus 143 l~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~sPE~~~~~~------~~~~~~Di~slG~ll~~ll~g~~pf~~ 214 (314)
+++....+||+|||+....... ............|.|||.+.... ..+.+.|+||+|++++++++...||..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 9999999999999999776321 01111112234599999986621 147789999999999999999999976
Q ss_pred CCcHHHHHHHHHhhCC-CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHh
Q 021299 215 SSDIDQLGKIFAAFGT-ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQAL 289 (314)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 289 (314)
........+++..... ......|.... .....+++..++++||..+|.+||+++++-
T Consensus 161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~------------------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 161 RNLVEDPDEIILRVKKGGSNPFRPSIEL------------------LNELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred ccccCChHHHHHHHHhcCCCCcCcchhh------------------hhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence 3322222222222111 11111111100 013466899999999999999999999873
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=8.5e-19 Score=142.90 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=103.6
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-----CCCCeeeeeceeccCC---eE
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-----KSPHIIELIDAFPHKG---NL 86 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~---~~ 86 (314)
.-.+.||+|++|.||. +..++.. ++|++...... ....+.+|+..++.+ +||||++++++++++. ..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 4567899999999995 5666555 69988764322 234567999999999 5799999999997763 43
Q ss_pred E-EEEeccc---ccHHHHHHhCCCCCCHHHHHHHHHHHHHHH-HHHHhCCcccCCCCCCceEEecC----CcEEEeeccc
Q 021299 87 H-LVFEFME---TDLETVIRNTNIFLSPADIKSYMQMTLKGL-AFCHKKWVLHRDMKPNNLLIGSH----GQLKLADFGL 157 (314)
Q Consensus 87 ~-iv~e~~~---g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~i~H~di~~~nil~~~~----~~~~l~df~~ 157 (314)
+ +|+||.+ |+|.+++.+. .+++. ..++.+++.++ +|||+++|+|+||||+||+++.+ .+++|+|++.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 3 7899955 5888888653 36655 35577777777 99999999999999999999743 3799999543
Q ss_pred e
Q 021299 158 A 158 (314)
Q Consensus 158 ~ 158 (314)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=5.7e-18 Score=139.58 Aligned_cols=136 Identities=18% Similarity=0.260 Sum_probs=109.6
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC------cchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEE
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG------VNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 90 (314)
++.||+|++|.||++.+ .|..+++|.......... ......+|++++..+.|+++.....++...+..+++|
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999976 577899998765432211 1123557899999999998887776766677789999
Q ss_pred ecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 91 EFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 91 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
||++| +|.+.+.... . ....++.+++.+|.+||+.|++|+|++|.||+++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99987 7776665432 2 7789999999999999999999999999999999 78999999998864
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.77 E-value=3.5e-19 Score=156.75 Aligned_cols=177 Identities=27% Similarity=0.402 Sum_probs=134.6
Q ss_pred eEEEEEeccc-ccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 85 NLHLVFEFME-TDLETVIRNT--NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 85 ~~~iv~e~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
+.||.|++|. .+|.+++..+ ....+......++.|++.++.| ++.+|+|+||.||+...+..++|+|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 5789999998 5899998644 3356778889999999999999 99999999999999999999999999999876
Q ss_pred CCCC------CcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhC-CCccCCCCcHHHHHHHHHhhCCCCCC
Q 021299 162 GSPD------RRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDIDQLGKIFAAFGTATPS 234 (314)
Q Consensus 162 ~~~~------~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
.... .......||.+|++||.+.+ ..++.++|||+||++|++++.. ...+... .+...+..+ ..++.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g--~ip~~ 480 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIRDG--IIPPE 480 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcC--CCChH
Confidence 4433 23445688999999999988 7799999999999999999972 2222111 111111111 11111
Q ss_pred CCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 235 QWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
. ..-.++-..|+.+||...|.+||++.+.-.|+|.+
T Consensus 481 ~-------------------------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 481 F-------------------------LQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred H-------------------------hhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 1 11145567999999999999999888888888763
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1.6e-19 Score=168.44 Aligned_cols=263 Identities=25% Similarity=0.370 Sum_probs=200.8
Q ss_pred HhhccceeeeCccccceEEEEEECCCC-cEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTG-QTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~-~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~i 88 (314)
...|.+.+.||+|+++.|-++....+. ..++.|.+............+..|..+-+.+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 457889999999999999888654433 34566655544333333333445777777776 9999999999999999999
Q ss_pred EEecccc-cHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCCCCceEEecCC-cEEEeeccceeeeCC-
Q 021299 89 VFEFMET-DLETVI-RNTNIFLSPADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHG-QLKLADFGLARIFGS- 163 (314)
Q Consensus 89 v~e~~~g-~l~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~i~H~di~~~nil~~~~~-~~~l~df~~~~~~~~- 163 (314)
..++..| ++...+ .......+...+..++.|+..++.|+| ..+++|+||+|+|.+++.++ ..++.|||++.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 9999886 666666 333326778888999999999999999 99999999999999999999 999999999987644
Q ss_pred C--CCccccccc-CccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcC
Q 021299 164 P--DRRFTHQVF-ARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA 240 (314)
Q Consensus 164 ~--~~~~~~~~~-~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
. ........| ++.|.+||.+.+.....+..|+||+|+++..+++|..|+...........- |...
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~-----------~~~~- 246 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS-----------WKSN- 246 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee-----------eccc-
Confidence 2 223334566 889999999988667789999999999999999999888665443311110 0000
Q ss_pred cccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccc
Q 021299 241 YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKS 296 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 296 (314)
....-...+..++....+++.+++..+|+.|.+.+++-.+||+..
T Consensus 247 -----------~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 -----------KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -----------ccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 000012234567889999999999999999999999999999998
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=2.1e-17 Score=134.78 Aligned_cols=138 Identities=22% Similarity=0.273 Sum_probs=104.4
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC--------------------cchhhHHHHHHHhhcCCCC-
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG--------------------VNFTALREIKLLKELKSPH- 72 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~--------------------~~~~~~~e~~~l~~l~~~~- 72 (314)
|.+.+.||+|++|.||++... +|+.+++|.++....... .......|...+..+.+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999764 789999999875431110 0012346788888887764
Q ss_pred -eeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 73 -IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 73 -i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
+...++ ....+++|||++|..+..+.. ......++.+++.++.++|+.|++|+||+|.||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 333433 234589999999843332221 134567889999999999999999999999999999999999
Q ss_pred EeeccceeeeC
Q 021299 152 LADFGLARIFG 162 (314)
Q Consensus 152 l~df~~~~~~~ 162 (314)
|+|||.+....
T Consensus 166 liDfg~~~~~~ 176 (198)
T cd05144 166 IIDWPQMVSTD 176 (198)
T ss_pred EEECCccccCC
Confidence 99999996543
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.8e-17 Score=134.20 Aligned_cols=131 Identities=21% Similarity=0.288 Sum_probs=101.0
Q ss_pred eeCccccceEEEEEECCCCcEEEEEEeecCCcccCc------chhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEec
Q 021299 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV------NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 92 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 92 (314)
.||+|++|.||++. ..|..+++|........... ...+.+|+++++.+.++++.....++......+++||+
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 48999999999997 45678999987654322111 12345799999999887755544444455667899999
Q ss_pred ccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 93 MET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 93 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
++| ++.+.+.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~g~~l~~~~~~~~-~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN-D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH-H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 987 6655544321 1 8899999999999999999999999999999 88999999998865
No 431
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1.7e-17 Score=148.66 Aligned_cols=261 Identities=21% Similarity=0.233 Sum_probs=205.0
Q ss_pred HHHhhccceeeeCc--cccceEEEEEE--CCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccC
Q 021299 9 KVADRYLKREVLGE--GTYGVVYKAID--TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHK 83 (314)
Q Consensus 9 ~~~~~y~~~~~lg~--g~~g~vy~~~~--~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~ 83 (314)
.....+.+.+.+|. |.+|.||.+.- ..++..+++|+-+.....+.....-.+++...+.++ |++.++....|++.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC
Confidence 44567888999999 99999999987 678889999986555443333333446666666664 88999988899999
Q ss_pred CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHH----HHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccce
Q 021299 84 GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLK----GLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLA 158 (314)
Q Consensus 84 ~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~ 158 (314)
+..++-.|.++.++..+.......++...++....+... |+.++|+.+++|.|++|+||+...+ ...+++|||..
T Consensus 191 ~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 191 GILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred CcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 999999999999999999988888999999999999999 9999999999999999999999999 88999999999
Q ss_pred eeeCCCCCccccc-----ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCC
Q 021299 159 RIFGSPDRRFTHQ-----VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATP 233 (314)
Q Consensus 159 ~~~~~~~~~~~~~-----~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 233 (314)
...+......... .+...|++||...+ .++..+|+|+||.++.+..++..++.... -
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~----------------~ 332 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGK----------------N 332 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCC----------------C
Confidence 8887665443333 66777999999865 67999999999999999988875543220 0
Q ss_pred CCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccccccC
Q 021299 234 SQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSFN 298 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 298 (314)
..|-+.... . .-..+..+.+.++...+..|++.+|..|+++..+..|+++....
T Consensus 333 ~~W~~~r~~---------~--ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 333 SSWSQLRQG---------Y--IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL 386 (524)
T ss_pred CCccccccc---------c--CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh
Confidence 011100000 0 00111224467777899999999999999999999999998653
No 432
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=9.7e-17 Score=149.86 Aligned_cols=139 Identities=19% Similarity=0.236 Sum_probs=107.2
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc------CcchhhHHHHHHHhhcCCCCeeeeeceeccCC
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE------GVNFTALREIKLLKELKSPHIIELIDAFPHKG 84 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 84 (314)
...|...+.||+|++|+||++.... ..+++|+........ .....+.+|+++++.++|+++.....+.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3455678999999999999997543 344555433221111 01124568999999999999888776666666
Q ss_pred eEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 85 NLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 85 ~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
..++||||++| +|.+.+. ....++.+++.+|.+||+.|++|+||||+||++ .++.++|+|||++...
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 77899999987 6666554 346789999999999999999999999999999 6789999999999753
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=1.5e-16 Score=128.53 Aligned_cols=136 Identities=24% Similarity=0.310 Sum_probs=96.9
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhh----------------------HHHHHHHhhcCCCC--
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA----------------------LREIKLLKELKSPH-- 72 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~~~~-- 72 (314)
.+.||+|++|+||++.+. +|+.|++|++............. ..|.+.+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999876 78999999987654322111111 24555555554432
Q ss_pred eeeeeceeccCCeEEEEEecccc-cHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCc
Q 021299 73 IIELIDAFPHKGNLHLVFEFMET-DLE-TVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 73 i~~~~~~~~~~~~~~iv~e~~~g-~l~-~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~ 149 (314)
+.++++. ...+++|||++| ++. ..+.... . ...+..++.+++.++.++|. .|++|+||+|+||+++ ++.
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc
Confidence 3334332 235899999997 221 1111111 1 16678999999999999999 9999999999999999 899
Q ss_pred EEEeeccceeee
Q 021299 150 LKLADFGLARIF 161 (314)
Q Consensus 150 ~~l~df~~~~~~ 161 (314)
++|+|||.+...
T Consensus 153 ~~liDfg~a~~~ 164 (187)
T cd05119 153 VYIIDVPQAVEI 164 (187)
T ss_pred EEEEECcccccc
Confidence 999999999654
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.67 E-value=1.4e-15 Score=127.08 Aligned_cols=135 Identities=24% Similarity=0.315 Sum_probs=101.0
Q ss_pred eeeC-ccccceEEEEEECCCCcEEEEEEeecCCc------c-----cCcchhhHHHHHHHhhcCCCCe--eeeeceecc-
Q 021299 18 EVLG-EGTYGVVYKAIDTKTGQTVAIKKIRLGKQ------K-----EGVNFTALREIKLLKELKSPHI--IELIDAFPH- 82 (314)
Q Consensus 18 ~~lg-~g~~g~vy~~~~~~~~~~~~iK~~~~~~~------~-----~~~~~~~~~e~~~l~~l~~~~i--~~~~~~~~~- 82 (314)
..|| .|+.|+||.+... +..+++|.+..... . ........+|++++..+.|+++ +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 8999999999654 77899998864221 0 1122345689999999998775 556655322
Q ss_pred CC---eEEEEEecccc--cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccc
Q 021299 83 KG---NLHLVFEFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGL 157 (314)
Q Consensus 83 ~~---~~~iv~e~~~g--~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~ 157 (314)
.+ ..++|+|+++| +|...+... .+++.. +.+++.++.+||+.|++|+||||.||+++.++.++|+|||.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 22 23599999996 676666542 355443 56899999999999999999999999999999999999998
Q ss_pred eee
Q 021299 158 ARI 160 (314)
Q Consensus 158 ~~~ 160 (314)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 865
No 435
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.65 E-value=3.5e-15 Score=135.34 Aligned_cols=170 Identities=23% Similarity=0.358 Sum_probs=128.1
Q ss_pred EEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCC
Q 021299 30 KAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLS 109 (314)
Q Consensus 30 ~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~ 109 (314)
.+..+.++.++.+.++..... .......+.++.++.++||+|+++++.++.++..|+|+|.+.. +..++.+ +.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~----l~ 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE----LG 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc-HHHHHHH----hH
Confidence 355577888999998877655 2333566899999999999999999999999999999999873 2222222 22
Q ss_pred HHHHHHHHHHHHHHHHHHH-hCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCcccccCccC
Q 021299 110 PADIKSYMQMTLKGLAFCH-KKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQ 188 (314)
Q Consensus 110 ~~~~~~i~~~i~~~l~~Lh-~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~ 188 (314)
...+..-+.||+.||.+|| +.+++|++|+.+.|+|+..|.+||++|..+...............--.|..|+.+..
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~--- 179 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP--- 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc---
Confidence 5666778899999999997 678999999999999999999999999988654332211112222223677765522
Q ss_pred CCCcchHhhHHHHHHHHHhCC
Q 021299 189 YGAGVDVWAAGCIFAELLNRR 209 (314)
Q Consensus 189 ~~~~~Di~slG~ll~~ll~g~ 209 (314)
-.-..|.|.||+++++++.|.
T Consensus 180 s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 SEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cccchhhhhHHHHHHHHhCcc
Confidence 124579999999999999994
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=2.3e-15 Score=116.90 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=108.7
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC--CCeeeeeceeccCCeEEEEEecc
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~iv~e~~ 93 (314)
+++.||+|.++.||++... +..+++|....... ...+.+|+..++.+.+ ..+.+++.+....+..++++|++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 5688999999999999864 37899999865432 3356689999999976 58888888887778899999999
Q ss_pred cccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 94 ETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK---WVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 94 ~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~---~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
.|.....+ +......++.+++.+++.||.. +++|+|++|.||++++.+.++++||+.+..
T Consensus 76 ~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 97433322 4566678899999999999985 799999999999999989999999998853
No 437
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.54 E-value=1.1e-13 Score=106.90 Aligned_cols=144 Identities=19% Similarity=0.214 Sum_probs=111.8
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc------hhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN------FTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~------~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.+..+.+|+.+.|+++ ...|+.++||.-.......... ..-.+|++.+.++.--+|....-++.+.....++
T Consensus 11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 6789999999999999 5668899998765544322211 2234788988888766666666666677777899
Q ss_pred Eecccc--cHHHHHHhCCCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC---cEEEeeccceeee
Q 021299 90 FEFMET--DLETVIRNTNIF-LSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF 161 (314)
Q Consensus 90 ~e~~~g--~l~~~~~~~~~~-l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~---~~~l~df~~~~~~ 161 (314)
|||++| ++.+++...... ........++.+|-..+.-||.++++|+||+.+||++..++ .+.++|||++...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999999 888888766433 33334489999999999999999999999999999997665 4589999999764
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.54 E-value=7.7e-15 Score=122.51 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=146.8
Q ss_pred HHHHhhcCCCCeeeeeceeccCC-----eEEEEEeccc-ccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC--
Q 021299 62 IKLLKELKSPHIIELIDAFPHKG-----NLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKK-- 130 (314)
Q Consensus 62 ~~~l~~l~~~~i~~~~~~~~~~~-----~~~iv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~-- 130 (314)
...+..+-|.|+++++.||.+.. ...++.||+. |++...+++. ...+......+|+.||+.||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P 197 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence 34556667999999999995543 5788999998 6777777643 34688888999999999999999987
Q ss_pred CcccCCCCCCceEEecCCcEEEeeccceeeeCC----CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHH
Q 021299 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELL 206 (314)
Q Consensus 131 ~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll 206 (314)
-++|++++.+.|++..+|-+|++--........ .........+-+.|.+||.=.. ...+-++|||++|....+|.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHH
Confidence 499999999999999999888863322211100 0111112234566889986543 34577899999999999998
Q ss_pred hCCCc-cCCCC---cHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCC
Q 021299 207 NRRPF-LQGSS---DIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKAR 282 (314)
Q Consensus 207 ~g~~p-f~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 282 (314)
.+..- -.... ..+..+....+ .-...-+.++.+|++..|..|
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~i~~----------------------------------len~lqr~~i~kcl~~eP~~r 322 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANVIIG----------------------------------LENGLQRGSITKCLEGEPNGR 322 (458)
T ss_pred HheeccCCCcceeehhhhhhhheee----------------------------------ccCccccCcCcccccCCCCCC
Confidence 76521 11111 11111111110 012234578899999999999
Q ss_pred CCHHHHhcCccccccCcceeeccccee
Q 021299 283 ITAQQALEHRFAKSFNGVFVFVDFCSY 309 (314)
Q Consensus 283 ps~~ell~h~~~~~~~~~~~~~~~~~~ 309 (314)
|++.+++.||-+-.+...-....+|=.
T Consensus 323 p~ar~llfHpllfeVhslkll~ahclv 349 (458)
T KOG1266|consen 323 PDARLLLFHPLLFEVHSLKLLMAHCLV 349 (458)
T ss_pred cchhhhhcCceeeecchHHHHhhHhee
Confidence 999999999998877655555555543
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.53 E-value=1.1e-13 Score=111.06 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=100.1
Q ss_pred eeeeCccccceEEEEEECC------CCcEEEEEEeecCCcc-----------cC---------cchhhH----HHHHHHh
Q 021299 17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQK-----------EG---------VNFTAL----REIKLLK 66 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~------~~~~~~iK~~~~~~~~-----------~~---------~~~~~~----~e~~~l~ 66 (314)
...||.|-.+.||.|.... .+..+|+|+++..... .. ....+. +|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999997543 3578999998764311 00 011122 6888888
Q ss_pred hcCC--CCeeeeeceeccCCeEEEEEeccccc-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcccCCCCCCce
Q 021299 67 ELKS--PHIIELIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFC-HKKWVLHRDMKPNNL 142 (314)
Q Consensus 67 ~l~~--~~i~~~~~~~~~~~~~~iv~e~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~i~H~di~~~ni 142 (314)
++.. -.+..++++ ...++||||++|+ +...... ...++...+..+..+++.+|..| |+.|++|+||++.||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 8864 345555543 4557999999873 2211111 22355667778889999999998 899999999999999
Q ss_pred EEecCCcEEEeeccceeeeC
Q 021299 143 LIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 143 l~~~~~~~~l~df~~~~~~~ 162 (314)
++. ++.+.|+|||.+...+
T Consensus 157 L~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEE-CCcEEEEECCCceeCC
Confidence 996 5789999999987653
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.48 E-value=2.6e-13 Score=123.11 Aligned_cols=152 Identities=20% Similarity=0.288 Sum_probs=99.6
Q ss_pred ccHHHHhhccc--eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-----------------------------
Q 021299 6 LSKKVADRYLK--REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV----------------------------- 54 (314)
Q Consensus 6 ~~~~~~~~y~~--~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~----------------------------- 54 (314)
++..+.+-|.. .+.||+|+.|.||+|.. .+|+.||||+.++.....-.
T Consensus 109 lg~~~~~~F~~fd~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~ 187 (437)
T TIGR01982 109 LGGPLEELFAEFEEKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVV 187 (437)
T ss_pred hCcCHHHHHhhCCCcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHH
Confidence 34444444432 46799999999999985 47899999998765311000
Q ss_pred ---------chhhHHHHHHHhhcC-----CCCeeeeece-eccCCeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHH
Q 021299 55 ---------NFTALREIKLLKELK-----SPHIIELIDA-FPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQ 118 (314)
Q Consensus 55 ---------~~~~~~e~~~l~~l~-----~~~i~~~~~~-~~~~~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~ 118 (314)
...+.+|++.+.++. ++++ .+-.. +...+..+++|||++| ++.+.........+ ...++.
T Consensus 188 ~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~ 263 (437)
T TIGR01982 188 KEFEKTLRRELDLRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAE 263 (437)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHH
Confidence 012334555555552 2333 33332 3334557899999998 55444432211222 234555
Q ss_pred HHHH-HHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 119 MTLK-GLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 119 ~i~~-~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
.++. .+..+|..|++|+|++|.||++..+++++++|||.+...+
T Consensus 264 ~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 264 NLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 5554 4688999999999999999999999999999999997764
No 441
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.45 E-value=7.9e-12 Score=110.72 Aligned_cols=221 Identities=14% Similarity=0.177 Sum_probs=160.9
Q ss_pred ccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceec----cCCeEEEEEecccc--cH
Q 021299 24 TYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFP----HKGNLHLVFEFMET--DL 97 (314)
Q Consensus 24 ~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~iv~e~~~g--~l 97 (314)
...+.|++..+.+|..|++|.+.....- ...+...-+++++++.|+|++++.+++. .+...++|++|+++ +|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~--~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQ--STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeecccccc--CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3468899999999999999999433221 1113346788999999999999999885 34478999999996 67
Q ss_pred HHHHHh--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 98 ETVIRN--------------TNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 98 ~~~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
.++.-. .+..++++.+|.++.|++.||.++|+.|+..+-|.|.+|+++.+.+++|..+|+......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 766522 123478899999999999999999999999999999999999999999999998877644
Q ss_pred CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCc-cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcc
Q 021299 164 PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYL 242 (314)
Q Consensus 164 ~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
+. + +-+.+ .++-|.=.||.+++.|.+|..- +..........
T Consensus 446 d~-------~-------~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~-------------------- 487 (655)
T KOG3741|consen 446 DP-------T-------EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHL-------------------- 487 (655)
T ss_pred CC-------C-------cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHH--------------------
Confidence 33 0 11222 4678999999999999999631 11111111101
Q ss_pred cchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcC---ccccccCc
Q 021299 243 PDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEH---RFAKSFNG 299 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h---~~~~~~~~ 299 (314)
..+...++.+++++|.-+....+++ -++.+++.+ .||..+..
T Consensus 488 --------------~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~~~ff~vmes 532 (655)
T KOG3741|consen 488 --------------TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIGSRFFTVMES 532 (655)
T ss_pred --------------HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHHHHHHHHHHh
Confidence 1112345888999999998888886 577777643 45544443
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=6.1e-13 Score=105.60 Aligned_cols=128 Identities=20% Similarity=0.123 Sum_probs=93.2
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeee-eeceeccCCeEEEEEecccc
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-LIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~iv~e~~~g 95 (314)
++.|++|..+.||++... +..+++|........ .....+|+..++.+.+.++++ ++... ....++|||+++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence 578899999999999754 778999997654321 123457888888886655443 44332 2335799999998
Q ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----ccCCCCCCceEEecCCcEEEeeccceee
Q 021299 96 DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV-----LHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 96 ~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i-----~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
....... .....+..+++.+++.||+.++ +|+|++|.||+++ ++.++++||+.+..
T Consensus 76 ~~l~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTED--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Ccccccc--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 4322110 1123456789999999999885 9999999999998 67899999998753
No 443
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.44 E-value=5.1e-14 Score=133.27 Aligned_cols=261 Identities=25% Similarity=0.388 Sum_probs=190.3
Q ss_pred HhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-chhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-NFTALREIKLLKELKSPHIIELIDAFPHKGNLHLV 89 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 89 (314)
.+.+.+.+-+.+|+++.+..+....+|.....|........... ...+..+-.++-...+|.++...-.+.-....+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 46677888999999999999987777766666654433221111 11111111222222345555555444555677899
Q ss_pred Eecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCC-----
Q 021299 90 FEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGS----- 163 (314)
Q Consensus 90 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~----- 163 (314)
+++.+| ++.+.++..+ ..+.+.++..+..+..++++||...+.|+|++|.|.+...++..++.+|+.....+-
T Consensus 883 ~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred hHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 999985 7888777665 477788888889999999999999999999999999999999999999874322110
Q ss_pred --------------------------CCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCc
Q 021299 164 --------------------------PDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSD 217 (314)
Q Consensus 164 --------------------------~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~ 217 (314)
+........+++.|.+||.+.+ ......+|.|+.|+++++.++|.+||....+
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 0011223467888999999877 6668899999999999999999999999888
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHH---HHhcCccc
Q 021299 218 IDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQ---QALEHRFA 294 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~---ell~h~~~ 294 (314)
......+...- ..|+. .....++++.+++..++..+|.+|..+. ++-.|+||
T Consensus 1041 q~~f~ni~~~~-----~~~p~--------------------g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~ 1095 (1205)
T KOG0606|consen 1041 QQIFENILNRD-----IPWPE--------------------GPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFF 1095 (1205)
T ss_pred hhhhhccccCC-----CCCCC--------------------CccccChhhhhhhhhhhccCchhccCcccccccccCCcc
Confidence 87776554331 12221 1234588999999999999999999987 89999999
Q ss_pred cccC
Q 021299 295 KSFN 298 (314)
Q Consensus 295 ~~~~ 298 (314)
+..+
T Consensus 1096 ~~~~ 1099 (1205)
T KOG0606|consen 1096 QDVD 1099 (1205)
T ss_pred CCCC
Confidence 9874
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=1.2e-12 Score=120.35 Aligned_cols=147 Identities=17% Similarity=0.280 Sum_probs=95.8
Q ss_pred HHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc--------------------C---c---------c-
Q 021299 9 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--------------------G---V---------N- 55 (314)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~--------------------~---~---------~- 55 (314)
++-..|.. +.||+|+.|.||+|..+.+|+.||+|+.++..... . . .
T Consensus 117 ~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 117 EWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 34456776 89999999999999988789999999998653110 0 0 0
Q ss_pred -----hhhHHHHHHHhhcC----CCCeeeeecee-ccCCeEEEEEecccc-cHHHH--HHhCCC---CCCHHHHHHHHHH
Q 021299 56 -----FTALREIKLLKELK----SPHIIELIDAF-PHKGNLHLVFEFMET-DLETV--IRNTNI---FLSPADIKSYMQM 119 (314)
Q Consensus 56 -----~~~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~iv~e~~~g-~l~~~--~~~~~~---~l~~~~~~~i~~~ 119 (314)
..+.+|+..+.++. +...+.+-.++ +-....+++|||+.| .+.+. +...+. .+.+..+..++.|
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 11234554444442 33333333333 234567899999998 45432 222221 1333333444444
Q ss_pred HHHHHHHHHhCCcccCCCCCCceEEecCC----cEEEeeccceeeeCC
Q 021299 120 TLKGLAFCHKKWVLHRDMKPNNLLIGSHG----QLKLADFGLARIFGS 163 (314)
Q Consensus 120 i~~~l~~Lh~~~i~H~di~~~nil~~~~~----~~~l~df~~~~~~~~ 163 (314)
+ ...|++|+|++|.||+++.++ +++++|||.......
T Consensus 276 i-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 V-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4 469999999999999999888 999999999987643
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=6.3e-13 Score=119.57 Aligned_cols=249 Identities=19% Similarity=0.170 Sum_probs=178.4
Q ss_pred HhhccceeeeCccccceEEEEEEC-CCCcEEEEEEeecCCcccCcchhhHHHHHHHhhc-CCCCeeeeeceeccCCeEEE
Q 021299 11 ADRYLKREVLGEGTYGVVYKAIDT-KTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHL 88 (314)
Q Consensus 11 ~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i 88 (314)
..+|-.+..||.|.++.|+.+... .++..|++|..............-..|+.+...+ .|.+++.....|...+..|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 467889999999999999998755 5778999998876654443332333566666666 48888888888888888889
Q ss_pred EEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecC-CcEEEeeccceeeeCCCCCc
Q 021299 89 VFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSH-GQLKLADFGLARIFGSPDRR 167 (314)
Q Consensus 89 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~-~~~~l~df~~~~~~~~~~~~ 167 (314)
--|||.|.....-......+++...+.+..|++.++.++|+..++|+|++|+||++..+ +..+++||+..+.+.. .
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~---~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF---S 420 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce---e
Confidence 99999863333322333347888889999999999999999999999999999999876 7889999998874321 1
Q ss_pred ccccccCcccc-CcccccCccCCCCcchHhhHHHHHHHHHhCCCc-cCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccch
Q 021299 168 FTHQVFARWYR-APELLFGAKQYGAGVDVWAAGCIFAELLNRRPF-LQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDY 245 (314)
Q Consensus 168 ~~~~~~~~~y~-sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (314)
.......-++. .+|.+.....+..+.|++|||+-+.+..++... ....+..... .+
T Consensus 421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~----~~------------------ 478 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR----SG------------------ 478 (524)
T ss_pred cccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeee----cc------------------
Confidence 12222333344 256565557788999999999999999988742 2221111110 00
Q ss_pred hhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCccc
Q 021299 246 VEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFA 294 (314)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~ 294 (314)
.....++...++..+.+.+...++..||.+.++..|.=|
T Consensus 479 ----------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 479 ----------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ----------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 001112335788899999999999999999998877644
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=6.6e-12 Score=97.58 Aligned_cols=133 Identities=17% Similarity=0.270 Sum_probs=95.9
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccC-cchh-----hHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEe
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG-VNFT-----ALREIKLLKELKSPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~-~~~~-----~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 91 (314)
..+++|+.+.+|.+.. -|..+++|.-.+...... ...+ -.+|++++..+.--+|....-+..+.....|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4678999999999944 455677776544432221 1112 2268999998876666655555556666789999
Q ss_pred cccccHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 92 FMETDLET-VIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 92 ~~~g~l~~-~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
|++|.++. .+... . ..++..+-.-+.-||..||+|+||+++||++...+ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99996655 55543 1 45666667777899999999999999999997654 999999999754
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.34 E-value=7.3e-11 Score=102.37 Aligned_cols=253 Identities=14% Similarity=0.083 Sum_probs=160.1
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeec-----ee--ccCCeEE
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-----AF--PHKGNLH 87 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~-----~~--~~~~~~~ 87 (314)
...+.||+|+.+.+|-.-. -.-.+.|++......... .+-..+.+.-.||-+-.-+. .+ ..+...-
T Consensus 14 ~~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~a----qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQA----QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCCccccCCccceeeecch---hhchhheeecCCCchHHH----HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 4567899999999998832 224677888654432211 12222333334554332111 11 1223377
Q ss_pred EEEecccc--cHHHHHH-----hCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 88 LVFEFMET--DLETVIR-----NTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 88 iv~e~~~g--~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
++|+.+.| ....++. ......++..+...++.++.+.+.||..|.+-+|++++|++|++++.|.|+|=..-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceee
Confidence 89999987 3333332 1233467888999999999999999999999999999999999999999998766655
Q ss_pred eCCCCCcccccccCccccCcccccC----ccCCCCcchHhhHHHHHHHHHhC-CCccCCCCcH-----HHHHHHHHhhCC
Q 021299 161 FGSPDRRFTHQVFARWYRAPELLFG----AKQYGAGVDVWAAGCIFAELLNR-RPFLQGSSDI-----DQLGKIFAAFGT 230 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~~y~sPE~~~~----~~~~~~~~Di~slG~ll~~ll~g-~~pf~~~~~~-----~~~~~~~~~~~~ 230 (314)
. .........+|...|.+||.-.- +..-+..+|.|.||+++++++.| .+||.+..-. -.-..|..+...
T Consensus 167 ~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ 245 (637)
T COG4248 167 N-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFA 245 (637)
T ss_pred c-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceee
Confidence 4 44555566778888999997531 12346889999999999999876 7999763210 000011111111
Q ss_pred CCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccC--CCCCCCHHH
Q 021299 231 ATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYD--PKARITAQQ 287 (314)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--p~~Rps~~e 287 (314)
..+. .......++...=+.-+++.+..|+.+|+... +.-|||++.
T Consensus 246 ya~~------------~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 246 YASD------------QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred echh------------ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 0000 00001111111112346889999999999854 567999864
No 448
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.23 E-value=4.4e-12 Score=115.94 Aligned_cols=154 Identities=19% Similarity=0.266 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeeccceeeeCCCCC---------cccccccCccccCcccccCccC
Q 021299 119 MTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDR---------RFTHQVFARWYRAPELLFGAKQ 188 (314)
Q Consensus 119 ~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~---------~~~~~~~~~~y~sPE~~~~~~~ 188 (314)
+++.|+.++|.. +++|++|.|++|.++.++.+||++|+++........ .........-|.+||.+.. ..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT 185 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence 334899999976 899999999999999999999999999976533211 1111122344999999877 66
Q ss_pred CCCcchHhhHHHHHHHHH-hCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHH
Q 021299 189 YGAGVDVWAAGCIFAELL-NRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDA 267 (314)
Q Consensus 189 ~~~~~Di~slG~ll~~ll-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
.+.++|+||||+++|.+. .|+..+...........-.... ... .......+++++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~-~~~-----------------------~~~~s~~~p~el 241 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLL-NAG-----------------------AFGYSNNLPSEL 241 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccc-ccc-----------------------cccccccCcHHH
Confidence 789999999999999998 5666555543333222211110 000 001114679999
Q ss_pred HHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 268 LDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 268 ~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
++=+.++|..++..||++.+++..|||+.-
T Consensus 242 ~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 242 RESLKKLLNGDSAVRPTLDLLLSIPFFSDP 271 (700)
T ss_pred HHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence 999999999999999999999999999864
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.23 E-value=1.1e-10 Score=96.63 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=100.2
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC--eeeeeceeccC---CeEEEEEe
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAFPHK---GNLHLVFE 91 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~---~~~~iv~e 91 (314)
.+.|+.|..+.||++... +|..+++|........ ........|+++++.+.+.+ +.+++.+.... +..+++||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 467899999999999764 3679999998654432 23335668999999987644 56667666553 36689999
Q ss_pred ccccc-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Q 021299 92 FMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK----------------------------------------- 129 (314)
Q Consensus 92 ~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~----------------------------------------- 129 (314)
+++|. +...... ..++......++.+++.++..||+
T Consensus 81 ~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 81 RVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99984 3332211 235666666667777777777763
Q ss_pred ---------------CCcccCCCCCCceEEec--CCcEEEeeccceee
Q 021299 130 ---------------KWVLHRDMKPNNLLIGS--HGQLKLADFGLARI 160 (314)
Q Consensus 130 ---------------~~i~H~di~~~nil~~~--~~~~~l~df~~~~~ 160 (314)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998853
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.21 E-value=8.3e-11 Score=94.04 Aligned_cols=126 Identities=27% Similarity=0.348 Sum_probs=80.7
Q ss_pred EEEEEECCCCcEEEEEEeecCCcc-----------cC--------cc-----hhhHHHHHHHhhcCCCC--eeeeeceec
Q 021299 28 VYKAIDTKTGQTVAIKKIRLGKQK-----------EG--------VN-----FTALREIKLLKELKSPH--IIELIDAFP 81 (314)
Q Consensus 28 vy~~~~~~~~~~~~iK~~~~~~~~-----------~~--------~~-----~~~~~e~~~l~~l~~~~--i~~~~~~~~ 81 (314)
||.|.. .+|..+|+|..+..... .. .+ ....+|.+.|.++..-+ +.+++++.
T Consensus 2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 888874 56789999998664211 00 11 11236999999998764 55555442
Q ss_pred cCCeEEEEEeccc--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH-HHhCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 82 HKGNLHLVFEFME--TDLETVIRNTNIFLSPADIKSYMQMTLKGLAF-CHKKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 82 ~~~~~~iv~e~~~--g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
...+||||++ |.....+.... ++.+....++.+++..+.. +|..|++|+||++.||+++++ .+.++|||.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qa 153 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQA 153 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcc
Confidence 3369999999 74444444332 2244556777888874444 679999999999999999887 9999999999
Q ss_pred eee
Q 021299 159 RIF 161 (314)
Q Consensus 159 ~~~ 161 (314)
...
T Consensus 154 v~~ 156 (188)
T PF01163_consen 154 VDS 156 (188)
T ss_dssp EET
T ss_pred eec
Confidence 764
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.18 E-value=4e-10 Score=95.40 Aligned_cols=141 Identities=17% Similarity=0.051 Sum_probs=96.8
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCccc---------CcchhhHHHHHHHhhcCCCCee--eeeceecc----
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE---------GVNFTALREIKLLKELKSPHII--ELIDAFPH---- 82 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~---------~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~---- 82 (314)
+.+.......|.++. .+|+.|.+|......... .....+.+|++.+..+...+|. +++++.+.
T Consensus 28 e~v~~~~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 344433444466663 457789999774433111 1111356788888777543333 23444422
Q ss_pred -CCeEEEEEecccc--cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEec-------CCcEE
Q 021299 83 -KGNLHLVFEFMET--DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGS-------HGQLK 151 (314)
Q Consensus 83 -~~~~~iv~e~~~g--~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~-------~~~~~ 151 (314)
....++|+|+++| ++.+++... ....+......++.+++..+..||+.|++|+|+++.||+++. +..+.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~ 185 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLS 185 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEE
Confidence 2357899999998 677776532 234567788899999999999999999999999999999975 46899
Q ss_pred Eeeccceee
Q 021299 152 LADFGLARI 160 (314)
Q Consensus 152 l~df~~~~~ 160 (314)
|+||+.+..
T Consensus 186 LIDl~r~~~ 194 (268)
T PRK15123 186 VIDLHRAQI 194 (268)
T ss_pred EEECCcccc
Confidence 999998854
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.14 E-value=4.4e-10 Score=92.67 Aligned_cols=138 Identities=24% Similarity=0.303 Sum_probs=102.9
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCccc--------------------CcchhhHHHHHHHhhcCCC--
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKE--------------------GVNFTALREIKLLKELKSP-- 71 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~--------------------~~~~~~~~e~~~l~~l~~~-- 71 (314)
+.+...||-|-.+.||.+.+ ..|.++++|.-+...... .......+|.+.|.++...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 35678899999999999985 478899999754332110 0112344788899988765
Q ss_pred CeeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 72 HIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 72 ~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
.+.+.++. +...+|||+++|..+..+. ++.+.+..++..|+.-+..+-..|++|+|+++-||+++++|.+.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 66666654 6668999999994433332 24555667777777777777799999999999999999999999
Q ss_pred Eeeccceeee
Q 021299 152 LADFGLARIF 161 (314)
Q Consensus 152 l~df~~~~~~ 161 (314)
++||..+...
T Consensus 243 vIDwPQ~v~~ 252 (304)
T COG0478 243 VIDWPQAVPI 252 (304)
T ss_pred EEeCcccccC
Confidence 9999887654
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.98 E-value=1.5e-08 Score=81.71 Aligned_cols=137 Identities=14% Similarity=0.069 Sum_probs=100.7
Q ss_pred CccccceEEEEEECCCCcEEEEEEeecCC----cccCcchhhHHHHHHHhhcCCCC--eeeeeceec-----cCCeEEEE
Q 021299 21 GEGTYGVVYKAIDTKTGQTVAIKKIRLGK----QKEGVNFTALREIKLLKELKSPH--IIELIDAFP-----HKGNLHLV 89 (314)
Q Consensus 21 g~g~~g~vy~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~-----~~~~~~iv 89 (314)
|.|+-+.|+..... |+.+-+|.-.... ..+.....+.+|+..+..+...+ +.+++ ++. ..-..++|
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 45888899998543 4578888764221 11334456778999888885422 44444 332 12246799
Q ss_pred Eecccc--cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc--EEEeeccceee
Q 021299 90 FEFMET--DLETVIRNT-NIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ--LKLADFGLARI 160 (314)
Q Consensus 90 ~e~~~g--~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~--~~l~df~~~~~ 160 (314)
+|-++| +|.+.+... -.+.+......+..+++.+++-||+.|+.|+|+.+.||+++.++. +.++||.-+..
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 999996 888877553 234677888899999999999999999999999999999987776 99999987754
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.98 E-value=7.8e-09 Score=84.64 Aligned_cols=136 Identities=18% Similarity=0.215 Sum_probs=93.0
Q ss_pred cceEEEEEEC---CCCcEEEEEEeecCCccc-----CcchhhHHHHHHHhhcCCCC--eeeeeceeccC----CeEEEEE
Q 021299 25 YGVVYKAIDT---KTGQTVAIKKIRLGKQKE-----GVNFTALREIKLLKELKSPH--IIELIDAFPHK----GNLHLVF 90 (314)
Q Consensus 25 ~g~vy~~~~~---~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~----~~~~iv~ 90 (314)
.+.++.+... ..++.|.+|.+....... -......+|++.+..+...+ ..+++++.+.. ...++|+
T Consensus 17 R~~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lit 96 (206)
T PF06293_consen 17 RRGGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLIT 96 (206)
T ss_pred CceEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEE
Confidence 3445555433 234566666543322111 12234567888777775332 33344443321 2458999
Q ss_pred ecccc--cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC---cEEEeeccceeee
Q 021299 91 EFMET--DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG---QLKLADFGLARIF 161 (314)
Q Consensus 91 e~~~g--~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~---~~~l~df~~~~~~ 161 (314)
|+++| +|.+.+..... .+......++.+++..++-||..|++|+|+++.|||++.++ .+.++||+-+...
T Consensus 97 e~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 97 EALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred EeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99997 67777765332 66777889999999999999999999999999999999887 8999999988753
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.97 E-value=4.7e-09 Score=84.89 Aligned_cols=138 Identities=17% Similarity=0.229 Sum_probs=91.8
Q ss_pred HHHHhhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhh---------HHHHHHHhhcCCCCeee---
Q 021299 8 KKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTA---------LREIKLLKELKSPHIIE--- 75 (314)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~---------~~e~~~l~~l~~~~i~~--- 75 (314)
+.+.++|.+.+++......-|.+.. -+|+.+++|..+..... .++.+ .+.+..+..+...++..
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r--~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~ 102 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRR--PERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD 102 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhh--HHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc
Confidence 3457899999999999988888884 55789999998764322 11111 13444444443322222
Q ss_pred -----eeceeccCCeEEEEEeccccc-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCc
Q 021299 76 -----LIDAFPHKGNLHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 76 -----~~~~~~~~~~~~iv~e~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~ 149 (314)
-...+......+++|||++|- +.+... +++ .+...+.+++.-||+.|++|+|.+|.|+++..+ .
T Consensus 103 ~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 103 PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred ceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-c
Confidence 222233345567899999993 333321 333 344567788999999999999999999999854 5
Q ss_pred EEEeecccee
Q 021299 150 LKLADFGLAR 159 (314)
Q Consensus 150 ~~l~df~~~~ 159 (314)
++++|++...
T Consensus 173 i~iID~~~k~ 182 (229)
T PF06176_consen 173 IRIIDTQGKR 182 (229)
T ss_pred EEEEECcccc
Confidence 9999997554
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.80 E-value=1.8e-08 Score=82.36 Aligned_cols=139 Identities=22% Similarity=0.209 Sum_probs=95.2
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc----------------c-hhh-----HHHHHHHhhcCCC--C
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV----------------N-FTA-----LREIKLLKELKSP--H 72 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~----------------~-~~~-----~~e~~~l~~l~~~--~ 72 (314)
...|++|-.+.||+|.. .++..+|+|+++........ . ... .+|...|+++... .
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34667888899999963 56789999999765422111 0 111 1467777777543 3
Q ss_pred eeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCcEE
Q 021299 73 IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 73 i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~~~ 151 (314)
+.+.+++. ...+|||+++..-.-.-.-+..++....+..+..++++.+.-|-. .+++|+||+.-|||+. ++.+.
T Consensus 132 vP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~ 206 (268)
T COG1718 132 VPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPY 206 (268)
T ss_pred CCCceeec----CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEE
Confidence 44445442 346999999854110001112224444678888999999999888 8999999999999998 88999
Q ss_pred Eeeccceeee
Q 021299 152 LADFGLARIF 161 (314)
Q Consensus 152 l~df~~~~~~ 161 (314)
++|++.+...
T Consensus 207 iID~~QaV~~ 216 (268)
T COG1718 207 IIDVSQAVTI 216 (268)
T ss_pred EEECcccccc
Confidence 9999998754
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.72 E-value=8.2e-08 Score=88.16 Aligned_cols=144 Identities=19% Similarity=0.270 Sum_probs=94.6
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcc--------------------------------------hhh
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVN--------------------------------------FTA 58 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~--------------------------------------~~~ 58 (314)
...|+.++-|.||.|.- .+|+.||||+.++.....-.. ..+
T Consensus 130 ~~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 130 PEPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred CCchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 36889999999999985 459999999987653210000 112
Q ss_pred HHHHHHHhhcC-----CCCeeeeeceeccCCeEEEEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 021299 59 LREIKLLKELK-----SPHIIELIDAFPHKGNLHLVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWV 132 (314)
Q Consensus 59 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i 132 (314)
.+|+..+.++. .+++.-..=+|+-.+...++|||++| .+.+........++...+...+.++ -+..+-..|+
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~--f~~q~~~dgf 286 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRA--FLRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHH--HHHHHHhcCc
Confidence 24555555552 24443333344556777899999999 3444322222346644444443333 2344456899
Q ss_pred ccCCCCCCceEEecCCcEEEeeccceeeeCC
Q 021299 133 LHRDMKPNNLLIGSHGQLKLADFGLARIFGS 163 (314)
Q Consensus 133 ~H~di~~~nil~~~~~~~~l~df~~~~~~~~ 163 (314)
+|+|.+|.||+++.+|++.+.|||.....+.
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 9999999999999999999999999876543
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.61 E-value=6.8e-07 Score=74.16 Aligned_cols=134 Identities=21% Similarity=0.199 Sum_probs=81.5
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC--eeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
..|++|..+.||+. .|..+++|...... ......+|.+.++.+..-+ +.+++++...++...++|++++|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 67899999999984 25578899886432 1224568999998886443 35666666677778899999998
Q ss_pred c-HHH-HH---------------------HhCC-CCCCHHH-HHHHHHH----------HHH-HHHHHH----hCCcccC
Q 021299 96 D-LET-VI---------------------RNTN-IFLSPAD-IKSYMQM----------TLK-GLAFCH----KKWVLHR 135 (314)
Q Consensus 96 ~-l~~-~~---------------------~~~~-~~l~~~~-~~~i~~~----------i~~-~l~~Lh----~~~i~H~ 135 (314)
. ... .. +.-. ....... ...+..+ +.. ...+|. ...++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 3 111 11 0000 0011111 0011000 001 111121 1246899
Q ss_pred CCCCCceEEecCCcEEEeeccceee
Q 021299 136 DMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 136 di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
|+.|.||++++++ +.++||+.+..
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcCc
Confidence 9999999999888 99999998853
No 459
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.53 E-value=2.5e-07 Score=89.92 Aligned_cols=199 Identities=18% Similarity=0.228 Sum_probs=134.0
Q ss_pred HHHHHHhhcCCCCeeeeeceeccCCeEE----EEEecccc-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 021299 60 REIKLLKELKSPHIIELIDAFPHKGNLH----LVFEFMET-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLH 134 (314)
Q Consensus 60 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~----iv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H 134 (314)
.|...+..+.|+|++.+..+-.+....- +..+++.+ ++...+.. -+.++.+..+.+..++..|++++|+....|
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~ 309 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLSLEH 309 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence 4666777778999999988764433222 34567776 55555554 446899999999999999999999996666
Q ss_pred CCCCCC---ceEEecCCcEEEe--eccceeeeCCCCCcccccccCccccCcccccC-ccCCCCcchHhhHHHHHHHHHhC
Q 021299 135 RDMKPN---NLLIGSHGQLKLA--DFGLARIFGSPDRRFTHQVFARWYRAPELLFG-AKQYGAGVDVWAAGCIFAELLNR 208 (314)
Q Consensus 135 ~di~~~---nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~-~~~~~~~~Di~slG~ll~~ll~g 208 (314)
.-+... +.-++..+.+..+ ||+.+.......... ....+..+.++|.... ........|+|++|.++..+..|
T Consensus 310 v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~-~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~ 388 (1351)
T KOG1035|consen 310 VVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF-SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQG 388 (1351)
T ss_pred eEEecccccccccCccceeecchhhhcccccCCCcccch-hhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhc
Confidence 555555 3334455566666 888877654433322 2233445777776644 12234557999999999999988
Q ss_pred CCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCC-HHHHHHHhhhcccCCCCCCCHHH
Q 021299 209 RPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSAS-DDALDLLSKMFTYDPKARITAQQ 287 (314)
Q Consensus 209 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~e 287 (314)
..+-........ . .+..+ .+..++..+|+..++++|+++.+
T Consensus 389 ~~i~~~~~~~~~--------------~------------------------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ 430 (1351)
T KOG1035|consen 389 EDISEKSAVPVS--------------L------------------------LDVLSTSELLDALPKCLDEDSEERLSALE 430 (1351)
T ss_pred Ccccccccchhh--------------h------------------------hccccchhhhhhhhhhcchhhhhccchhh
Confidence 743221110000 0 00111 26889999999999999999999
Q ss_pred HhcCccccccC
Q 021299 288 ALEHRFAKSFN 298 (314)
Q Consensus 288 ll~h~~~~~~~ 298 (314)
++.|+|.+.-.
T Consensus 431 ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 431 LLTHPFLRFPT 441 (1351)
T ss_pred hhhchhccccc
Confidence 99999998654
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=2.1e-06 Score=66.75 Aligned_cols=130 Identities=18% Similarity=0.197 Sum_probs=93.3
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEeccc
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~ 94 (314)
...+.|++|.+|.||++.+. |..+++|+-+.+.... .+..|++++..+.-.++.+=+-.+.. .++.|||+.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~----~l~kEakiLeil~g~~~~p~vy~yg~---~~i~me~i~ 95 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRR----NLEKEAKILEILAGEGVTPEVYFYGE---DFIRMEYID 95 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecCCcchh----hHHHHHHHHHHhhhcCCCceEEEech---hhhhhhhhc
Confidence 56788999999999999654 6689999987665443 55689999998887776665444422 246699999
Q ss_pred c-cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC-CCceEEecCCcEEEeeccceeee
Q 021299 95 T-DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMK-PNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 95 g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~-~~nil~~~~~~~~l~df~~~~~~ 161 (314)
| .|....... + .+-...++....-|-..||-|+.|+ |..+++-.++++.|+||..|+..
T Consensus 96 G~~L~~~~~~~----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 96 GRPLGKLEIGG----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred Ccchhhhhhcc----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 9 555544321 1 3444556666666778899999975 55566666669999999988743
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.42 E-value=5.5e-06 Score=69.74 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=48.1
Q ss_pred eeeCcccc-ceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCeeeeeceeccCCeEEEEEecccc
Q 021299 18 EVLGEGTY-GVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHIIELIDAFPHKGNLHLVFEFMET 95 (314)
Q Consensus 18 ~~lg~g~~-g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e~~~g 95 (314)
..|..|.. ..||++.. .+..+++|...... ......|+++++.+. +--+.+++.+...++..++||++++|
T Consensus 4 ~~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 4 ERVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred eecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 34445555 88999953 34688999886543 123457888888774 33355666666666678899999998
Q ss_pred c
Q 021299 96 D 96 (314)
Q Consensus 96 ~ 96 (314)
.
T Consensus 77 ~ 77 (244)
T cd05150 77 V 77 (244)
T ss_pred c
Confidence 4
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.39 E-value=4.9e-06 Score=69.22 Aligned_cols=138 Identities=18% Similarity=0.242 Sum_probs=77.1
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC--eeeeecee---ccCCeEEEEEe
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF---PHKGNLHLVFE 91 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~---~~~~~~~iv~e 91 (314)
++.|+.|..+.||++.... ..+++|..... .......+|..+++.+...+ +..++... ......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5789999999999997654 59999997544 12234557888887775333 34444422 33445789999
Q ss_pred ccccc-HHH----------------H---HHhCC---CCCCHHH------HHHH---------------HHHHHH-HHHH
Q 021299 92 FMETD-LET----------------V---IRNTN---IFLSPAD------IKSY---------------MQMTLK-GLAF 126 (314)
Q Consensus 92 ~~~g~-l~~----------------~---~~~~~---~~l~~~~------~~~i---------------~~~i~~-~l~~ 126 (314)
+++|. +.. . ++... ....... ...+ ...+.. .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 99983 333 0 01110 0000000 0000 111112 2333
Q ss_pred HH-------hCCcccCCCCCCceEEe-cCCcEEEeeccceee
Q 021299 127 CH-------KKWVLHRDMKPNNLLIG-SHGQLKLADFGLARI 160 (314)
Q Consensus 127 Lh-------~~~i~H~di~~~nil~~-~~~~~~l~df~~~~~ 160 (314)
++ ...++|+|++|.||+++ .++++-|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 33 24599999999999999 566678999988754
No 463
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.26 E-value=9.8e-06 Score=74.51 Aligned_cols=152 Identities=21% Similarity=0.285 Sum_probs=95.1
Q ss_pred cccHHHHhhcc--ceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc----------------------------
Q 021299 5 DLSKKVADRYL--KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV---------------------------- 54 (314)
Q Consensus 5 ~~~~~~~~~y~--~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------- 54 (314)
|++..+.+-|. ..+.|+..+.+.||+|+-+. |+.||+|+-++.....-.
T Consensus 152 ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE 230 (538)
T KOG1235|consen 152 ELGAPIEDIFSEFDEEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDE 230 (538)
T ss_pred HhCCCHHHHHHhcCcchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHH
Confidence 34444544443 34689999999999998554 999999997665322100
Q ss_pred -------chhhHHHHHHHhhc----CCCC---eeeeec-eeccCCeEEEEEecccc---cHHHHHHhCCCCCCHHHHHHH
Q 021299 55 -------NFTALREIKLLKEL----KSPH---IIELID-AFPHKGNLHLVFEFMET---DLETVIRNTNIFLSPADIKSY 116 (314)
Q Consensus 55 -------~~~~~~e~~~l~~l----~~~~---i~~~~~-~~~~~~~~~iv~e~~~g---~l~~~~~~~~~~l~~~~~~~i 116 (314)
.-.+.+|++...+. .|-+ -+.+-. ++.-.....++|||++| +-.+.+.+.+ ++...+..-
T Consensus 231 ~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~~ 308 (538)
T KOG1235|consen 231 IAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILNK 308 (538)
T ss_pred HHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHHH
Confidence 01222344444443 2333 111222 33445677899999998 4445555554 555544333
Q ss_pred HHHHHHHHHHHHhCCcccCCCCCCceEEec----CCcEEEeeccceeee
Q 021299 117 MQMTLKGLAFCHKKWVLHRDMKPNNLLIGS----HGQLKLADFGLARIF 161 (314)
Q Consensus 117 ~~~i~~~l~~Lh~~~i~H~di~~~nil~~~----~~~~~l~df~~~~~~ 161 (314)
+.+.. +.-|-..|++|+|=+|.||++.+ ++.+.+-|||+....
T Consensus 309 l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 309 LVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 33322 22334678999999999999984 568999999999765
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=98.20 E-value=2.4e-05 Score=77.29 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=55.6
Q ss_pred ceeeeCccccceEEEEEECCCC--cEEEEEEeecCCcccCcchhhHHHHHHHhhcC-CCCe--eeeeceeccC---CeEE
Q 021299 16 KREVLGEGTYGVVYKAIDTKTG--QTVAIKKIRLGKQKEGVNFTALREIKLLKELK-SPHI--IELIDAFPHK---GNLH 87 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i--~~~~~~~~~~---~~~~ 87 (314)
.++.++.|..+.+|++.....+ ..+++|+........ ....+.+|+++++.+. |.++ .+++.++.+. +..|
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 4678899999999999765433 478888865432211 1224568999999985 5654 6666666543 4678
Q ss_pred EEEeccccc
Q 021299 88 LVFEFMETD 96 (314)
Q Consensus 88 iv~e~~~g~ 96 (314)
+|||+++|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999984
No 465
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.20 E-value=5.9e-05 Score=60.95 Aligned_cols=133 Identities=20% Similarity=0.337 Sum_probs=91.9
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCC--------------cccCcchhhHHHHHHHhhcC------CCCeeee
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK--------------QKEGVNFTALREIKLLKELK------SPHIIEL 76 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~--------------~~~~~~~~~~~e~~~l~~l~------~~~i~~~ 76 (314)
...||+|+.-.||.-- .+....||+..... ..........+|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 4678999999998763 34567899987766 01111233445655555554 7899999
Q ss_pred eceeccCCeEEEEEeccc---c----cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCC-
Q 021299 77 IDAFPHKGNLHLVFEFME---T----DLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHG- 148 (314)
Q Consensus 77 ~~~~~~~~~~~iv~e~~~---g----~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~- 148 (314)
+|+.+.+...-+|+|.+. | +|.+++.+.. +++ ... ..+-.-..+|-+++|+.+|++|.||++..+.
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 999999999999999875 3 5777774433 555 333 3344556788899999999999999996543
Q ss_pred ---cEEEee-ccce
Q 021299 149 ---QLKLAD-FGLA 158 (314)
Q Consensus 149 ---~~~l~d-f~~~ 158 (314)
.++|+| ||..
T Consensus 157 ~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 157 GEFRLVLIDGLGEK 170 (199)
T ss_pred CceEEEEEeCCCCc
Confidence 466665 4544
No 466
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.13 E-value=5e-05 Score=63.47 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=46.3
Q ss_pred eeeeCccccceEEEEEECC-CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeee-eeceeccCCeEEEEEeccc
Q 021299 17 REVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-LIDAFPHKGNLHLVFEFME 94 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~iv~e~~~ 94 (314)
++.|..|-...+|++.... .++.|++|........ . ....+|..+++.+...++.+ ++... .+ .++|||++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~--~d~~~E~~~~~~l~~~gl~P~v~~~~-~~---~~l~e~i~ 75 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-I--IDRERELRIHKLLSKHGLAPKLYATF-QN---GLIYEFIP 75 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-e--ecHHHHHHHHHHHHhCCCCCeEEEEe-CC---cEEEEeeC
Confidence 5778899999999996432 3568999977543221 1 12336888888886544443 33332 22 38999998
Q ss_pred c
Q 021299 95 T 95 (314)
Q Consensus 95 g 95 (314)
|
T Consensus 76 G 76 (235)
T cd05157 76 G 76 (235)
T ss_pred C
Confidence 7
No 467
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.11 E-value=1.5e-05 Score=69.06 Aligned_cols=143 Identities=22% Similarity=0.181 Sum_probs=99.8
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCc-------------------chh-----hHHHHHHHhhcCC
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGV-------------------NFT-----ALREIKLLKELKS 70 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~-------------------~~~-----~~~e~~~l~~l~~ 70 (314)
.+-.+|..|-...||.|. ..+|..+|||+++.+..-... .++ ..+|++.|+++..
T Consensus 147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 356788899999999996 567888999998665321100 011 1258888888877
Q ss_pred CCeeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCceEEecCCc
Q 021299 71 PHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLHRDMKPNNLLIGSHGQ 149 (314)
Q Consensus 71 ~~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H~di~~~nil~~~~~~ 149 (314)
.+|.-.--... ....+||++++++-.-.-+-....++...+..+-.+++..+.-|.+ .++||.||+--|+++ .+|.
T Consensus 226 aGIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ 302 (520)
T KOG2270|consen 226 AGIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGK 302 (520)
T ss_pred cCCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCE
Confidence 66442221111 3447999999953221112233357888899999999998888876 589999999999988 5679
Q ss_pred EEEeeccceeee
Q 021299 150 LKLADFGLARIF 161 (314)
Q Consensus 150 ~~l~df~~~~~~ 161 (314)
+.++|.+.+...
T Consensus 303 lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 303 LYIIDVSQSVEH 314 (520)
T ss_pred EEEEEccccccC
Confidence 999999887644
No 468
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.05 E-value=3.6e-05 Score=65.26 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=76.4
Q ss_pred eeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee-eeeceeccCCeEEEEEecccccH
Q 021299 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVFEFMETDL 97 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~iv~e~~~g~l 97 (314)
.+..|-.+.+|++. .++..+++|........... ...+|.++++.+...++. +++... . .++|+|+++|..
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~--~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~ 74 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGV--DRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEV 74 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccC--cHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcc
Confidence 46678889999995 45678999976543222111 235788888888654443 233322 2 258999999832
Q ss_pred HH---------------H---HHhCC---CCCCHH-HHHHHHHHH---------HHHHHHHHh--------CCcccCCCC
Q 021299 98 ET---------------V---IRNTN---IFLSPA-DIKSYMQMT---------LKGLAFCHK--------KWVLHRDMK 138 (314)
Q Consensus 98 ~~---------------~---~~~~~---~~l~~~-~~~~i~~~i---------~~~l~~Lh~--------~~i~H~di~ 138 (314)
.+ . ++... .+++.. .+..+..++ ...+..+.. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 11 1 11111 111211 111221111 111222221 258999999
Q ss_pred CCceEEecCCcEEEeeccceee
Q 021299 139 PNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 139 ~~nil~~~~~~~~l~df~~~~~ 160 (314)
|.||++++++ +.|+||+.+..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999998876 78999998864
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.93 E-value=3.7e-05 Score=64.31 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=26.1
Q ss_pred CCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
.+++|+|+.+.||+++.++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3589999999999998766667999998754
No 470
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.92 E-value=0.00014 Score=62.94 Aligned_cols=138 Identities=15% Similarity=0.070 Sum_probs=80.1
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC--eeeeece------eccCCeEE
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDA------FPHKGNLH 87 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~------~~~~~~~~ 87 (314)
-++.+..|....+|++.. .+..+++|..... .......|++++..+.+.+ +.+++.. ...++..+
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEKV-----SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCCC-----ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 366778888899999953 3457999987641 1123446777777775433 3343332 12344568
Q ss_pred EEEecccccHHH---------------HHHhCCCCC----------CHHHH----------HHHHHHHHHHHHHHHh---
Q 021299 88 LVFEFMETDLET---------------VIRNTNIFL----------SPADI----------KSYMQMTLKGLAFCHK--- 129 (314)
Q Consensus 88 iv~e~~~g~l~~---------------~~~~~~~~l----------~~~~~----------~~i~~~i~~~l~~Lh~--- 129 (314)
+++++++|.... .++.....+ .+... ......+..++..+.+
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 999999872210 011100000 00000 0011112233444443
Q ss_pred ----CCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 130 ----KWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 130 ----~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
.+++|+|+.|.||+++.++.+.|+||+.+..
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999887788999998853
No 471
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.88 E-value=1.2e-06 Score=80.44 Aligned_cols=243 Identities=14% Similarity=0.100 Sum_probs=153.0
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC-eeeeeceeccCCeEEEEEecc
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH-IIELIDAFPHKGNLHLVFEFM 93 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~iv~e~~ 93 (314)
.....+++++.+.+++.+...+.... .+.+... ....-++++|.+.+||| .+...+-++.+...++.++++
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~ 316 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRIC 316 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhh
Confidence 33445678888999988765554333 3333221 23345889999999999 666666677788899999999
Q ss_pred ccc--HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEEEeeccceeeeCCCCCccccc
Q 021299 94 ETD--LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQ 171 (314)
Q Consensus 94 ~g~--l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 171 (314)
.+. ...........+.+-+...+.+.-+.+++++|+.-=+|+| ||+.. ++.++..+|+......... .....
T Consensus 317 s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s-~~~~~~~~~~v~~~L~~~~-~~~t~ 390 (829)
T KOG0576|consen 317 STGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS-EEEVKLLDFAVPPQLTRTM-KPRTA 390 (829)
T ss_pred cCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc-ccccccccccCCcccCccc-ccccC
Confidence 864 2222222222244445566677778899999988767887 66553 3688999999887654332 44556
Q ss_pred ccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCCCcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccc
Q 021299 172 VFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYV 251 (314)
Q Consensus 172 ~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (314)
.+++.++|||.... ..+...-|.|++|+=..++.-|.+|-.... ..... ...... ...+.+.
T Consensus 391 ~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~------~g~~p~---s~~L~~~------ 452 (829)
T KOG0576|consen 391 IGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPM------IGNGPN---SPMLTDK------ 452 (829)
T ss_pred CCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc--cccCC------CCCCCC---ccccchh------
Confidence 78888999998766 567788899999987667776666654310 00000 000000 0000000
Q ss_pred cCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccccc
Q 021299 252 AAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAKSF 297 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 297 (314)
..+. +.+-.++...|+...|..|+.....+-|.+|+.=
T Consensus 453 ------~aw~--~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 453 ------SAWS--PVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred ------hhcC--cccccCCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 0000 1111146778889999999999998888888753
No 472
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.87 E-value=0.00021 Score=57.44 Aligned_cols=127 Identities=25% Similarity=0.267 Sum_probs=85.0
Q ss_pred hhccceeeeCcccc-ceEEEEEECCCCcEEEEEEeec---CCcc-------c---------CcchhhHHHHHHHhhcC--
Q 021299 12 DRYLKREVLGEGTY-GVVYKAIDTKTGQTVAIKKIRL---GKQK-------E---------GVNFTALREIKLLKELK-- 69 (314)
Q Consensus 12 ~~y~~~~~lg~g~~-g~vy~~~~~~~~~~~~iK~~~~---~~~~-------~---------~~~~~~~~e~~~l~~l~-- 69 (314)
..++.++.||.|.. |.||+++ -.|..||+|.+.. .... . .....+..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 67889999999999 9999995 4577999999322 1110 0 01123446666666664
Q ss_pred -CCCe--eeeeceeccC------------------CeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Q 021299 70 -SPHI--IELIDAFPHK------------------GNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCH 128 (314)
Q Consensus 70 -~~~i--~~~~~~~~~~------------------~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh 128 (314)
+.++ ++++++.--. ....||.|+....- .+.. .-+.+|.+-+..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 4455 7888875100 12356777766432 1223 33456667778999
Q ss_pred hCCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 129 KKWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 129 ~~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
+.||+-+|+++.|.. .-+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999987 5678899854
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.87 E-value=0.00014 Score=63.50 Aligned_cols=138 Identities=14% Similarity=0.091 Sum_probs=78.6
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC--eeeeecee------ccCCeEEE
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH--IIELIDAF------PHKGNLHL 88 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--i~~~~~~~------~~~~~~~i 88 (314)
++.++.|....+|++.. ++..+++|....... ......+.+++..+...+ +.+++... ..++..++
T Consensus 27 i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~ 100 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT--DVGRYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC 100 (307)
T ss_pred ccccCCccccceEEEEe--CCCcEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence 56677888889999863 244789998754321 113335666666664322 33333321 23456789
Q ss_pred EEecccccH------H---------HHHHhCCCCC--------CHHHHH---------------HHHHHHHHHHHHHH--
Q 021299 89 VFEFMETDL------E---------TVIRNTNIFL--------SPADIK---------------SYMQMTLKGLAFCH-- 128 (314)
Q Consensus 89 v~e~~~g~l------~---------~~~~~~~~~l--------~~~~~~---------------~i~~~i~~~l~~Lh-- 128 (314)
++++++|.. . ..++.....+ ....-. .....+...+.++.
T Consensus 101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~ 180 (307)
T TIGR00938 101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF 180 (307)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence 999998721 1 0111111111 001000 00111233444443
Q ss_pred -----hCCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 129 -----KKWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 129 -----~~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
..+++|+|+++.||+++.++.+.|+||+.+..
T Consensus 181 ~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 181 WPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred hhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 26899999999999999888778999998853
No 474
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.80 E-value=0.0002 Score=62.27 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=45.7
Q ss_pred eeeeCccccceEEEEEECC------CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee-eeeceeccCCeEEEE
Q 021299 17 REVLGEGTYGVVYKAIDTK------TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLV 89 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~------~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~iv 89 (314)
++.|..|-...+|++.... .++.+++|......... ....+|.++++.+...++. +++.++. + .+|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~---~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v 75 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELL---IDRERELVVFARLSERNLGPKLYGIFP-N---GRI 75 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcce---echHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence 4677888889999997433 25789999976543221 1334788888887654443 3344433 2 257
Q ss_pred Eecccc
Q 021299 90 FEFMET 95 (314)
Q Consensus 90 ~e~~~g 95 (314)
+++++|
T Consensus 76 ~e~i~G 81 (302)
T cd05156 76 EEFIPS 81 (302)
T ss_pred hheeCC
Confidence 888776
No 475
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.72 E-value=0.0014 Score=58.77 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=51.5
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-----ccCcchhhHHHHHHHhhcC--C-CCeeeeeceeccCCeEE
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-----KEGVNFTALREIKLLKELK--S-PHIIELIDAFPHKGNLH 87 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~-~~i~~~~~~~~~~~~~~ 87 (314)
-.+.||.|..+.||++.....++.+++|.-..... .+........|.+.|+.+. . ..+.+++.+ +....+
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~ 107 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAV 107 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCE
Confidence 35789999999999998754446899998643211 1112234456777777763 2 345666655 335568
Q ss_pred EEEecccc
Q 021299 88 LVFEFMET 95 (314)
Q Consensus 88 iv~e~~~g 95 (314)
+|||++++
T Consensus 108 lVME~L~~ 115 (401)
T PRK09550 108 TVMEDLSD 115 (401)
T ss_pred EEEecCCC
Confidence 99999875
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.72 E-value=0.0012 Score=57.91 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=26.7
Q ss_pred CCcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
.+++|+|++|.||+++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 4899999999999998766668999998864
No 477
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.72 E-value=0.00012 Score=58.75 Aligned_cols=98 Identities=20% Similarity=0.232 Sum_probs=76.0
Q ss_pred HHHHHHhhcCC-CCeeeeeceeccCCeEEEEEecccc-cHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Q 021299 60 REIKLLKELKS-PHIIELIDAFPHKGNLHLVFEFMET-DLETVIR--NTNIFLSPADIKSYMQMTLKGLAFCHK---KWV 132 (314)
Q Consensus 60 ~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~e~~~g-~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~Lh~---~~i 132 (314)
+|.-+++.+++ +++.+++|++ ++ +++.|+.+. .+.+... ..--.-++.....++.+++..+.+|+. ..+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C---G~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC---GR-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC---CC-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 57778888876 6999999998 22 578899884 4432110 011136899999999999999999997 347
Q ss_pred ccCCCCCCceEEecCCcEEEeeccceeee
Q 021299 133 LHRDMKPNNLLIGSHGQLKLADFGLARIF 161 (314)
Q Consensus 133 ~H~di~~~nil~~~~~~~~l~df~~~~~~ 161 (314)
...|++++|+-++.++++|++|.+.....
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchh
Confidence 77999999999999999999999887654
No 478
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.57 E-value=0.00092 Score=58.90 Aligned_cols=139 Identities=17% Similarity=0.249 Sum_probs=79.3
Q ss_pred cceeeeCccccceEEEEEECCC---CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee-eeeceeccCCeEEEEE
Q 021299 15 LKREVLGEGTYGVVYKAIDTKT---GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLVF 90 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~---~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~iv~ 90 (314)
..++.|..|-...+|++..... +..|++|....... ... ...+|..+++.+...++. ++++++ .++ +|.
T Consensus 17 i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~I--dR~~E~~il~~l~~~gl~P~~l~~~-~~G---~i~ 89 (330)
T PLN02421 17 FSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVI--DRERELQAIKYLSAAGFGAKLLGVF-GNG---MIQ 89 (330)
T ss_pred eEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEe--chHHHHHHHHHHHhcCCCCceeEEe-CCc---Eee
Confidence 3566777788899999964432 34899998765432 111 234788888888765554 344444 233 578
Q ss_pred ecccccHH-----------HHH-------HhCCCC----C-CHHHHHHHHHHH----------------------HHHHH
Q 021299 91 EFMETDLE-----------TVI-------RNTNIF----L-SPADIKSYMQMT----------------------LKGLA 125 (314)
Q Consensus 91 e~~~g~l~-----------~~~-------~~~~~~----l-~~~~~~~i~~~i----------------------~~~l~ 125 (314)
+|++|... ..+ +....+ . ....+..+..++ ..-+.
T Consensus 90 ~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 169 (330)
T PLN02421 90 SFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIV 169 (330)
T ss_pred hhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHH
Confidence 88776211 111 111100 1 122222222221 11111
Q ss_pred H---HH-hC----CcccCCCCCCceEEec-CCcEEEeeccceee
Q 021299 126 F---CH-KK----WVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (314)
Q Consensus 126 ~---Lh-~~----~i~H~di~~~nil~~~-~~~~~l~df~~~~~ 160 (314)
. +. .. -++|+|+.+.||++++ ++.++++||+.|..
T Consensus 170 ~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 170 ELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred HHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1 11 11 2799999999999975 47899999998854
No 479
>PLN02236 choline kinase
Probab=97.39 E-value=0.0024 Score=56.65 Aligned_cols=139 Identities=17% Similarity=0.248 Sum_probs=79.6
Q ss_pred cceeeeCccccceEEEEEECC----CCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCee-eeeceeccCCeEEEE
Q 021299 15 LKREVLGEGTYGVVYKAIDTK----TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHII-ELIDAFPHKGNLHLV 89 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~iv 89 (314)
.-+..|..|-...+|++.... .++.+++|....... ... ...+|..+++.+...++. ++++.+.. + .|
T Consensus 39 ~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~-~~i--dR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v 111 (344)
T PLN02236 39 LQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE-LFF--DRDDEIRTFECMSRHGQGPRLLGRFPN-G---RV 111 (344)
T ss_pred EEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC-eee--chHHHHHHHHHHHHcCCCCceEEEECC-c---eE
Confidence 345677778889999986432 246899998865432 111 224788888888655544 34444432 2 47
Q ss_pred Eecccc-cHH----------HH-------HHhCCC-----CCCHHHHHHHHHHH-----------------HHHHHHH--
Q 021299 90 FEFMET-DLE----------TV-------IRNTNI-----FLSPADIKSYMQMT-----------------LKGLAFC-- 127 (314)
Q Consensus 90 ~e~~~g-~l~----------~~-------~~~~~~-----~l~~~~~~~i~~~i-----------------~~~l~~L-- 127 (314)
.+|++| ++. .. ++.... ......+..+..++ ...+..|
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 888776 211 01 111110 01112222332221 1111111
Q ss_pred ------HhCCcccCCCCCCceEEec-CCcEEEeeccceee
Q 021299 128 ------HKKWVLHRDMKPNNLLIGS-HGQLKLADFGLARI 160 (314)
Q Consensus 128 ------h~~~i~H~di~~~nil~~~-~~~~~l~df~~~~~ 160 (314)
+...++|+|+++.||++++ ++.+.++||..+..
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1236899999999999986 46899999998864
No 480
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.34 E-value=0.0043 Score=54.67 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=49.7
Q ss_pred eeCccccceEEEEEECCCCcEEEEEEeecCC-----cccCcchhhHHHHHHHhhcC--CCCeeeeeceeccCCeEEEEEe
Q 021299 19 VLGEGTYGVVYKAIDTKTGQTVAIKKIRLGK-----QKEGVNFTALREIKLLKELK--SPHIIELIDAFPHKGNLHLVFE 91 (314)
Q Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~iv~e 91 (314)
.||.|....||++.....++.++||.-.... ..+-...+..-|...|+... .|..++-+-++ +.....++||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-D~e~~~~vME 80 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-DTEMAVTVME 80 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-ccccceehHh
Confidence 4799999999999875434689999754321 12223334446777777764 35444433233 4455568999
Q ss_pred cccc--cHHHHH
Q 021299 92 FMET--DLETVI 101 (314)
Q Consensus 92 ~~~g--~l~~~~ 101 (314)
+++. .+...+
T Consensus 81 dL~~~~ilR~~L 92 (370)
T TIGR01767 81 DLSHHKIARKGL 92 (370)
T ss_pred hCccchHHHHHH
Confidence 8864 344444
No 481
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.32 E-value=0.00023 Score=61.01 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=93.1
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccC---------------cc-----hhhHHHHHHHhhcCCCC-
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEG---------------VN-----FTALREIKLLKELKSPH- 72 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~---------------~~-----~~~~~e~~~l~~l~~~~- 72 (314)
+.+..+||-|-.+-+|.+-+ ..|.+.++|.-+....... .+ ....+|..-++.+....
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 56788999999999999964 5578899986433221110 01 12235666666664332
Q ss_pred -eeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCceEEecCCcEE
Q 021299 73 -IIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHRDMKPNNLLIGSHGQLK 151 (314)
Q Consensus 73 -i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~di~~~nil~~~~~~~~ 151 (314)
+.+.+++ +..++|||++.|-.+..+..- ..+..+...+...+--|-.+|++|+|.+-=||++.+++.++
T Consensus 173 pVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~ 242 (465)
T KOG2268|consen 173 PVPKPIDH----NRHCVVMELVDGYPLRQVRHV------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIV 242 (465)
T ss_pred CCCCcccc----cceeeHHHhhcccceeeeeec------CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEE
Confidence 3344433 566899999998544433321 12245566667777888899999999999999999999999
Q ss_pred Eeeccceee
Q 021299 152 LADFGLARI 160 (314)
Q Consensus 152 l~df~~~~~ 160 (314)
++||..+..
T Consensus 243 vIDFPQmvS 251 (465)
T KOG2268|consen 243 VIDFPQMVS 251 (465)
T ss_pred EeechHhhc
Confidence 999987643
No 482
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.31 E-value=0.0025 Score=56.86 Aligned_cols=78 Identities=15% Similarity=0.171 Sum_probs=49.5
Q ss_pred eeeeCccccceEEEEEECCCCcEEEEEEeecC----CcccCcchhhHHHHHHHhhcC--CCCeeeeeceeccCCeEEEEE
Q 021299 17 REVLGEGTYGVVYKAIDTKTGQTVAIKKIRLG----KQKEGVNFTALREIKLLKELK--SPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~iv~ 90 (314)
.+.||.|.-.-||++.+...++.++||.-... ...+-...+..-|.+.|+... .|..++-+-++ +.....+||
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-D~e~~~~vM 112 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-DSVMNCCVM 112 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-CcHHhhHHH
Confidence 67889999999999987433567999964332 222333344556888888774 46444433233 444556788
Q ss_pred ecccc
Q 021299 91 EFMET 95 (314)
Q Consensus 91 e~~~g 95 (314)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 87753
No 483
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.28 E-value=0.0013 Score=59.88 Aligned_cols=172 Identities=20% Similarity=0.274 Sum_probs=106.2
Q ss_pred hhHHHHHHHhhcCCCCeeeeeceecc-CCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Q 021299 57 TALREIKLLKELKSPHIIELIDAFPH-KGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKKWVLHR 135 (314)
Q Consensus 57 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~i~H~ 135 (314)
.+.-..+.++++.|++....+++-.. .....+|+|+++-++.+.+.... +-..... .+++.|
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~~--------------~~~~~~- 90 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESLL--------------AHGVLH- 90 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhhc--------------ccccce-
Confidence 34457788899999999998887633 34578999999999999888654 1111100 222222
Q ss_pred CCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCCCccCCC
Q 021299 136 DMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGS 215 (314)
Q Consensus 136 di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~~pf~~~ 215 (314)
.|+ ...+| .++. . | | ....+|+||||+|.++.++..|...+...
T Consensus 91 ----~~~-------~~~td-~~~t---~-------------~--~------~~~~pKsdVwsl~~i~~el~L~~~l~~~~ 134 (725)
T KOG1093|consen 91 ----LNI-------IYITD-HFLT---K-------------Y--P------SPIGPKSDVWSLGFIILELYLGISLEAEL 134 (725)
T ss_pred ----ehh-------hhccc-cccc---c-------------C--C------CCCCcchhhhhHHHHHHHHHHhhHHHHHH
Confidence 222 22222 0010 0 1 1 11125999999999999999998777666
Q ss_pred CcHHHHHHHHHhhCCCCCCCCCCcCcccchhhhccccCCCCCccCCCCCHHHHHHHhhhcccCCCCCCCHHHHhcCcccc
Q 021299 216 SDIDQLGKIFAAFGTATPSQWPDLAYLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRFAK 295 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 295 (314)
...+...-+...+... .+. ....... .+...++..+.++..+|+...|..||...++.+++-|.
T Consensus 135 ~~s~~l~~i~k~~~~d-~~~-----~~~a~e~----------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ 198 (725)
T KOG1093|consen 135 TESEYLEILLKYYTDD-QEL-----LSTAMEH----------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFT 198 (725)
T ss_pred HHHHHHHHHHHhccCc-hhH-----HHHHHHH----------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHH
Confidence 5555555444332111 000 0000000 11123467788999999999999999999999999887
Q ss_pred cc
Q 021299 296 SF 297 (314)
Q Consensus 296 ~~ 297 (314)
.+
T Consensus 199 ev 200 (725)
T KOG1093|consen 199 EV 200 (725)
T ss_pred HH
Confidence 65
No 484
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=97.27 E-value=0.0036 Score=54.68 Aligned_cols=130 Identities=21% Similarity=0.187 Sum_probs=87.1
Q ss_pred ccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCceEEecCCcEEEeecccee
Q 021299 81 PHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK-WVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 81 ~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~-~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.++.+.|++|++.++.+...- ....+++..++.+.+..++-+..+ .+-|+++..+||+++ +|.+.|+||.+++
T Consensus 296 de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsR 369 (488)
T COG5072 296 DETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSR 369 (488)
T ss_pred CCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeee
Confidence 345567788888776644322 245678889999999888888875 789999999999999 9999999999998
Q ss_pred eeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCC--CccCCCCcHHHHHHHHH
Q 021299 160 IFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR--PFLQGSSDIDQLGKIFA 226 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~--~pf~~~~~~~~~~~~~~ 226 (314)
....+.... ....--|-.+.| .-..+.+||-+ |-.|+.|. ..++..+.........+
T Consensus 370 l~~~q~~is-----y~rldhp~lF~G--~dd~QFeIYrl---Mr~l~~g~wa~F~P~TNvlWL~yLs~~ 428 (488)
T COG5072 370 LSYSQGIIS-----YNRLDHPDLFNG--VDDYQFEIYRL---MRRLLKGRWAQFEPITNVLWLYYLSHQ 428 (488)
T ss_pred cccCCceee-----ccccCchhhhcC--ccceeeeHHHH---HHHHhcCcHHhcccchhhHHHHHHHHH
Confidence 543322211 122344555544 23788888886 55566665 33444555555444333
No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.20 E-value=0.0086 Score=53.75 Aligned_cols=76 Identities=18% Similarity=0.179 Sum_probs=50.9
Q ss_pred ceeeeCccccceEEEEEECCCCcEEEEEEeecCCc-----ccCcchhhHHHHHHHhhcC--C-CCeeeeeceeccCCeEE
Q 021299 16 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQ-----KEGVNFTALREIKLLKELK--S-PHIIELIDAFPHKGNLH 87 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~-~~i~~~~~~~~~~~~~~ 87 (314)
..+.||.|....||++.+. +..++||.-..... .+........|++.|+.+. . ..+.+++.+.+ ...+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 5778899999999999753 45799998663221 1223334445677777664 2 46777777765 3457
Q ss_pred EEEecccc
Q 021299 88 LVFEFMET 95 (314)
Q Consensus 88 iv~e~~~g 95 (314)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 88999976
No 486
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.15 E-value=0.0069 Score=52.58 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=79.8
Q ss_pred cceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC--CCeeeeeceeccCC--eEEEEE
Q 021299 15 LKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS--PHIIELIDAFPHKG--NLHLVF 90 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~--~~~iv~ 90 (314)
.+++.+..|....+|...+. +++++++ ...............+|.+.++.+.- --+...++.+.++. ..|.||
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~ 104 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM 104 (321)
T ss_pred ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence 45666666666666777544 7889999 43212111122234467777777643 22333444454443 679999
Q ss_pred eccccc-HHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHH----------------------------------------
Q 021299 91 EFMETD-LETVIRNTNIFLSPADIKSYM-QMTLKGLAFCH---------------------------------------- 128 (314)
Q Consensus 91 e~~~g~-l~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~Lh---------------------------------------- 128 (314)
+++.|. ..+.... .+.. .+.+ ..++..|+.||
T Consensus 105 ~~veGe~~~~~~~~----~~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p 178 (321)
T COG3173 105 EWVEGEVVWSALPP----ESLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIP 178 (321)
T ss_pred EEecceeccCcCCc----ccch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCc
Confidence 999982 1111000 0000 1111 13333333333
Q ss_pred ----------h--------CCcccCCCCCCceEEecCCcEEEeeccceeeeC
Q 021299 129 ----------K--------KWVLHRDMKPNNLLIGSHGQLKLADFGLARIFG 162 (314)
Q Consensus 129 ----------~--------~~i~H~di~~~nil~~~~~~~~l~df~~~~~~~ 162 (314)
. ..++|+|+++.|+++++++-+-+.||+.+..-+
T Consensus 179 ~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 179 LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 2 237999999999999999889999999997643
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.06 E-value=0.0099 Score=51.85 Aligned_cols=29 Identities=21% Similarity=0.400 Sum_probs=25.6
Q ss_pred CCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.+++|+|+++.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57899999999999987 678999998775
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.03 E-value=0.012 Score=51.35 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=27.7
Q ss_pred CcccCCCCCCceEEecCCcEEEeeccceee
Q 021299 131 WVLHRDMKPNNLLIGSHGQLKLADFGLARI 160 (314)
Q Consensus 131 ~i~H~di~~~nil~~~~~~~~l~df~~~~~ 160 (314)
+++|+|+.+.||+++.++.+.++||..++.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998864
No 489
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.98 E-value=5.2e-05 Score=76.41 Aligned_cols=152 Identities=13% Similarity=0.034 Sum_probs=110.3
Q ss_pred HHHHHhhcCCCCeeeeeceec--cCCeEEEEEeccc-ccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC-C--
Q 021299 61 EIKLLKELKSPHIIELIDAFP--HKGNLHLVFEFME-TDLETVIRNT---NIFLSPADIKSYMQMTLKGLAFCHKK-W-- 131 (314)
Q Consensus 61 e~~~l~~l~~~~i~~~~~~~~--~~~~~~iv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~Lh~~-~-- 131 (314)
|..-+++..|+++.....-.. ++..-+..++++. |.+.+.+.+. ...++...+.....+.+....-+|+. |
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 334445556777766555443 2334578888987 5788887643 33455555555555545566666643 2
Q ss_pred --cccCCCCCCceEEecCCcEEEeeccceeeeCCCCCcccccccCccccCcccccCccCCCCcchHhhHHHHHHHHHhCC
Q 021299 132 --VLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGAGVDVWAAGCIFAELLNRR 209 (314)
Q Consensus 132 --i~H~di~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~sPE~~~~~~~~~~~~Di~slG~ll~~ll~g~ 209 (314)
-+|.++++.|.++..+-+++++++|+.++........+...+++.|++|++... ..++.++|+|.+|+.+|..-.|.
T Consensus 1359 ~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred ccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhccc
Confidence 578999999999999999999999999966666666677778888999987755 66788899999999999998888
Q ss_pred CccC
Q 021299 210 PFLQ 213 (314)
Q Consensus 210 ~pf~ 213 (314)
.+|.
T Consensus 1438 ~~fi 1441 (2724)
T KOG1826|consen 1438 AYFI 1441 (2724)
T ss_pred HHHH
Confidence 7663
No 490
>PTZ00384 choline kinase; Provisional
Probab=96.91 E-value=0.0097 Score=53.41 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=43.9
Q ss_pred cceeeeCccccceEEEEEECCC-CcEEEEEEe-ecC-CcccCcchhhHHHHHHHhhcCCCCeeee-eceeccCCeEEEEE
Q 021299 15 LKREVLGEGTYGVVYKAIDTKT-GQTVAIKKI-RLG-KQKEGVNFTALREIKLLKELKSPHIIEL-IDAFPHKGNLHLVF 90 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~~~-~~~~~iK~~-~~~-~~~~~~~~~~~~e~~~l~~l~~~~i~~~-~~~~~~~~~~~iv~ 90 (314)
..++.|..|-.+.+|++..... +..+.+|.+ ... .......-...+|.++++.+...++.+- ++.+. + +++.
T Consensus 53 i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~-~---g~l~ 128 (383)
T PTZ00384 53 IEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG-D---FTIQ 128 (383)
T ss_pred EEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC-C---EEEE
Confidence 4566777888999999964332 223333321 110 1111111233478999999976665554 44442 2 4889
Q ss_pred ecccc
Q 021299 91 EFMET 95 (314)
Q Consensus 91 e~~~g 95 (314)
||++|
T Consensus 129 efIeG 133 (383)
T PTZ00384 129 EWVEG 133 (383)
T ss_pred EEecc
Confidence 99987
No 491
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.88 E-value=0.0029 Score=51.88 Aligned_cols=32 Identities=38% Similarity=0.594 Sum_probs=22.4
Q ss_pred CCcccCCCCCCceEE-ecCCcEEEeeccceeee
Q 021299 130 KWVLHRDMKPNNLLI-GSHGQLKLADFGLARIF 161 (314)
Q Consensus 130 ~~i~H~di~~~nil~-~~~~~~~l~df~~~~~~ 161 (314)
..++|+|+.+.||++ +.++.++++||..|...
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n 175 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGYN 175 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EEE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhhc
Confidence 358999999999999 88899999999988653
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.81 E-value=0.014 Score=50.12 Aligned_cols=75 Identities=19% Similarity=0.136 Sum_probs=46.3
Q ss_pred ccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcC---CCCeeeeeceeccCCeEEEEE
Q 021299 14 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELK---SPHIIELIDAFPHKGNLHLVF 90 (314)
Q Consensus 14 y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~iv~ 90 (314)
-+-.+.++.|....+|.+. .+++.+++|.-.... ..-+..|++-|+.|. .-.+.+++++...++..++++
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~-----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll 91 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESG-----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL 91 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG-----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChhh-----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence 4566788999999999995 677899999986221 124456788788773 345667777766666679999
Q ss_pred ecccc
Q 021299 91 EFMET 95 (314)
Q Consensus 91 e~~~g 95 (314)
|+++.
T Consensus 92 e~l~~ 96 (288)
T PF03881_consen 92 EFLEM 96 (288)
T ss_dssp E----
T ss_pred EeecC
Confidence 99873
No 493
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.70 E-value=0.0084 Score=51.38 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=25.3
Q ss_pred CcccCCCCCCceEEecCCc-EEEeeccceee
Q 021299 131 WVLHRDMKPNNLLIGSHGQ-LKLADFGLARI 160 (314)
Q Consensus 131 ~i~H~di~~~nil~~~~~~-~~l~df~~~~~ 160 (314)
.++|+|++|.||+++.+++ .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999987555 56999998864
No 494
>PRK10593 hypothetical protein; Provisional
Probab=96.64 E-value=0.012 Score=51.07 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=71.4
Q ss_pred hhccceeeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCC---CCeeeeeceecc---CCe
Q 021299 12 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS---PHIIELIDAFPH---KGN 85 (314)
Q Consensus 12 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~---~~~ 85 (314)
..-.-.+.||+|..+.||..... +.++++|..+.... ...+..|++.++.+.. -.+.++++.+.. .+.
T Consensus 14 ~~~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~~~~----~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~ 87 (297)
T PRK10593 14 EKLSRVECISEQPYAALWALYDS--QGNPMPLMARSFST----PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGP 87 (297)
T ss_pred hhhheeeecCCccceeEEEEEcC--CCCEEEEEeccccc----chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCC
Confidence 35556778999999999999532 33677787532111 1245578888888853 356677766543 366
Q ss_pred EEEEEeccccc-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 021299 86 LHLVFEFMETD-LETVIRNTNIFLSPADIKSYMQMTLKGLAFCHKK 130 (314)
Q Consensus 86 ~~iv~e~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~ 130 (314)
.++|||+++|. +.+ . ..+......+..+++++++.||+.
T Consensus 88 ~~LVmE~i~G~~~~~-~-----~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 88 DVLLLERLRGVSVEA-P-----ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred eEEEEeccCCEecCC-C-----CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999984 332 1 123444566777888888888874
No 495
>PTZ00296 choline kinase; Provisional
Probab=96.55 E-value=0.034 Score=50.96 Aligned_cols=73 Identities=11% Similarity=0.155 Sum_probs=45.6
Q ss_pred ceeeeCccccceEEEEEECCC--------CcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeee-eeceeccCCeE
Q 021299 16 KREVLGEGTYGVVYKAIDTKT--------GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIE-LIDAFPHKGNL 86 (314)
Q Consensus 16 ~~~~lg~g~~g~vy~~~~~~~--------~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~ 86 (314)
.++.|..|-...+|++..... ++.|++|+.-.....-. ...+|..+++.+...++.+ +++.+. +
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI---dR~~E~~v~~~ls~~gi~P~l~~~f~-g--- 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY---NPISEFEVYKTMSKYRIAPQLLNTFS-G--- 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee---CHHHHHHHHHHHHHCCCCCceEEEeC-C---
Confidence 677788888889999964421 46799998865432221 2336777777776544443 344442 2
Q ss_pred EEEEecccc
Q 021299 87 HLVFEFMET 95 (314)
Q Consensus 87 ~iv~e~~~g 95 (314)
+.+.+|++|
T Consensus 182 g~I~efi~g 190 (442)
T PTZ00296 182 GRIEEWLYG 190 (442)
T ss_pred CEEEEeeCC
Confidence 357788876
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.37 E-value=0.037 Score=48.52 Aligned_cols=135 Identities=17% Similarity=0.169 Sum_probs=75.9
Q ss_pred eeeCccccceEEEEEECCCCcEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCC------eeeeecee--ccCC--eEE
Q 021299 18 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPH------IIELIDAF--PHKG--NLH 87 (314)
Q Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~------i~~~~~~~--~~~~--~~~ 87 (314)
..|.+ ....+|.+... +.++++|..... .. ...+..|...+..+...+ +...-+-. .-++ +.+
T Consensus 32 ~~l~s-~eN~~f~~~~~--~g~~iLki~~~~-~~---~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a 104 (331)
T COG2334 32 RGLNS-EENSNFRVQTE--DGRYILKIYRPG-WT---RAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPA 104 (331)
T ss_pred ccccc-ccCceEEEEec--CCCeEEEEecCC-CC---HHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeE
Confidence 34445 56778999643 345599999765 22 224446777777774222 12221111 1233 778
Q ss_pred EEEecccccHHHH----------------HHhC--CC---------CCCHH----H---------HHHHHHHHHHHHHHH
Q 021299 88 LVFEFMETDLETV----------------IRNT--NI---------FLSPA----D---------IKSYMQMTLKGLAFC 127 (314)
Q Consensus 88 iv~e~~~g~l~~~----------------~~~~--~~---------~l~~~----~---------~~~i~~~i~~~l~~L 127 (314)
-++++++|..... ++.. +- ...+. . ......++...+..+
T Consensus 105 ~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~ 184 (331)
T COG2334 105 ALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRL 184 (331)
T ss_pred EEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHH
Confidence 8999999843331 1110 00 01111 0 011223333444444
Q ss_pred Hh--------CC--cccCCCCCCceEEecCCc-EEEeecccee
Q 021299 128 HK--------KW--VLHRDMKPNNLLIGSHGQ-LKLADFGLAR 159 (314)
Q Consensus 128 h~--------~~--i~H~di~~~nil~~~~~~-~~l~df~~~~ 159 (314)
.+ .+ ++|+|+.|+||+++.+.. +.++||+.+.
T Consensus 185 ~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 185 LARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred HhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 42 33 899999999999998875 8999999885
No 497
>PRK06148 hypothetical protein; Provisional
Probab=96.23 E-value=0.072 Score=54.12 Aligned_cols=31 Identities=32% Similarity=0.513 Sum_probs=26.4
Q ss_pred CCcccCCCCCCceEEecCC--cEE-Eeeccceee
Q 021299 130 KWVLHRDMKPNNLLIGSHG--QLK-LADFGLARI 160 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~--~~~-l~df~~~~~ 160 (314)
.+++|+|+++.||+++.++ ++. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 5799999999999998875 554 999998864
No 498
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.93 E-value=0.26 Score=43.40 Aligned_cols=28 Identities=32% Similarity=0.407 Sum_probs=24.0
Q ss_pred CCcccCCCCCCceEEecCCcEEEeecccee
Q 021299 130 KWVLHRDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 130 ~~i~H~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.+++|+|+.+.||+++ + .+.++||+.+.
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 4689999999999995 4 57899999885
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.79 E-value=0.06 Score=44.04 Aligned_cols=103 Identities=19% Similarity=0.235 Sum_probs=63.8
Q ss_pred cEEEEEEeecCCcccCcchhhHHHHHHHhhcCCCCeeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHH
Q 021299 38 QTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYM 117 (314)
Q Consensus 38 ~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~ 117 (314)
...++|+++...... ....+.++.+++.++. +|+++.. .++-.+-++.|+|..- .+.. ..++
T Consensus 86 G~L~lKKi~slp~~~-~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~----------~i~~---~N~i 147 (308)
T PF07387_consen 86 GPLFLKKIRSLPCCI-NDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKI----------KINF---SNFI 147 (308)
T ss_pred chhhhhhccCCCccc-chhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCc----------ccch---hHHH
Confidence 366777776554321 1123456777777642 4555542 2333566888988621 0100 1122
Q ss_pred HHHHHHHHHHHh--CCcccCCCCCCceEEecCCcEEEeeccce
Q 021299 118 QMTLKGLAFCHK--KWVLHRDMKPNNLLIGSHGQLKLADFGLA 158 (314)
Q Consensus 118 ~~i~~~l~~Lh~--~~i~H~di~~~nil~~~~~~~~l~df~~~ 158 (314)
.--+.+|.-.|+ .+..|+|.+|+||+.+..|.+||.|-+..
T Consensus 148 ~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 148 TAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred HHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence 222467777884 47999999999999999999999998755
No 500
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.48 E-value=0.058 Score=46.74 Aligned_cols=137 Identities=17% Similarity=0.191 Sum_probs=87.7
Q ss_pred cceeeeCccccceEEEEEEC-----C-----CCcEEEEEEeecCCc----------------------ccCcchhhH--H
Q 021299 15 LKREVLGEGTYGVVYKAIDT-----K-----TGQTVAIKKIRLGKQ----------------------KEGVNFTAL--R 60 (314)
Q Consensus 15 ~~~~~lg~g~~g~vy~~~~~-----~-----~~~~~~iK~~~~~~~----------------------~~~~~~~~~--~ 60 (314)
.|-..|..|-.+.|..+.-. . ....+|||+++.... .+......+ +
T Consensus 255 ~i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEk 334 (531)
T KOG2269|consen 255 SIDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEK 334 (531)
T ss_pred hhhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHH
Confidence 45677889999999888421 1 124588887744310 011111111 3
Q ss_pred HHHHHhhc-----CCCCeeeeeceeccCCeEEEEEecccccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccc
Q 021299 61 EIKLLKEL-----KSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMTLKGLAFCHK-KWVLH 134 (314)
Q Consensus 61 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~iv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~i~H 134 (314)
|...|.++ .+|.+|.+.. ..+||.|++.+=.-.-+-....++.+.....-.|+..++..|.. .-++|
T Consensus 335 EmhNL~RMq~~GlpcP~vV~lkk-------hvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LVH 407 (531)
T KOG2269|consen 335 EMHNLSRMQKHGLPCPQVVKLKK-------HVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMCRLYKECLLVH 407 (531)
T ss_pred HHHHHHHHHhcCCCCCceeeeec-------ceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHHHHHHhhheee
Confidence 45555554 3566666653 35999999842111111122237888888888899988888865 57999
Q ss_pred CCCCCCceEEecCCcEEEeecccee
Q 021299 135 RDMKPNNLLIGSHGQLKLADFGLAR 159 (314)
Q Consensus 135 ~di~~~nil~~~~~~~~l~df~~~~ 159 (314)
.|++-.|++...+ ++.++|...+.
T Consensus 408 ADlSEyN~Lw~~g-Kvw~IDVsQsv 431 (531)
T KOG2269|consen 408 ADLSEYNLLWTPG-KVWVIDVSQSV 431 (531)
T ss_pred cchhhhhheecCC-ceEEEechhcc
Confidence 9999999999776 88999887664
Done!