BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021300
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/296 (70%), Positives = 247/296 (83%)
Query: 1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
M ++PE+EHP AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG ++YP+VPGHEIVG VTEVGSKV K VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65 WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+ PLD APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
D+PG KFAKA G KVTVISTSPSKK EA++ GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ G +
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRK 300
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 185/289 (64%)
Query: 8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
E + GWAA+D SG+LSP+ ++ R TG +DV ++ CGICH+DLH KN+ G + YP
Sbjct: 5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
+VPGHE+VG V EVGS VSKF VGD VGVGC+VG C C C DLE YCPK I +Y +
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
Y +G T GG++ V + FVV+IPEG ++ APLLCAG+TVYSPL +GL +PG+
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
K AKAMG VTVIS+S K+ EA++ LGAD +++ DQ +M +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEE 296
+D +IDTV H L P + LLK GKL+L+G PL+ L++G +
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRK 293
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 217 bits (553), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 158/272 (58%), Gaps = 5/272 (1%)
Query: 25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84
L P +RR G DV ++ +CG+CHSDLH +++EW T+YP VPGHEIVG V VG +
Sbjct: 35 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQ 94
Query: 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMV 143
V K+ GD VGVGC+V SC+ C+ C LENYC + TY + D T GGYS +V
Sbjct: 95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIV 154
Query: 144 ADEHFVVRIPE-GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
E +V+RI L A APLLCAGIT YSPLR + PG K
Sbjct: 155 VHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKL 213
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
A AMG V +TS +K+ EA + LGAD + SR+ DEM A + + D I++TV+A H L
Sbjct: 214 AHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLD 272
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELP-AFSLLM 293
LLK G + LVGAP P + P F+L+M
Sbjct: 273 DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIM 304
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 12/281 (4%)
Query: 15 GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEI 74
G+A P FSR A G +DV + + GICHSD+H +EW IYP++PGHEI
Sbjct: 7 GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 75 VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANKYHDGT 132
G++ EVG V KFK+GD VGVGC V SC++C C E +C KV+ TY + +HD
Sbjct: 67 AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXX 192
GGYS+ +V DE++V+ + + PL+ APLLCAGIT YSPL+F + K G
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
K+A AMG +V+V + + KK +A+ +G F Q + + +D II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTDPKQCKEE-----LDFII 239
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLL 292
T+ + L + LL G L LVG P P+E+ P S+
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLP--PVEVAPVLSVF 278
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 37 EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVG 95
+ D+ K+ CG+C SD+H WGN P+V GHEIVG V ++G K S KVG +VG
Sbjct: 33 DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVG 92
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
VG V SC CD C D E YC K + TY+ Y DG ++ GGY++ + EHFVV IPE
Sbjct: 93 VGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPEN 152
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIST 215
P APLLC G+TVYSPL G PG +KAMG + VIS
Sbjct: 153 IPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 211
Query: 216 SPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAV----HPLMPLIGLLKS 270
S K+ +A+ ++GAD ++ + ++ D + T D I+ S++ +MP +K
Sbjct: 212 SSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMP--KAMKV 268
Query: 271 QGKLVLVGAPE-------KPLELPAFSL 291
G++V + PE KP L A S+
Sbjct: 269 GGRIVSISIPEQHEMLSLKPYGLKAVSI 296
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G V K+ G+CH+DLH +W P +PGHE VG V+ VGS VS+ K GD+V
Sbjct: 26 GPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
GV + +C C+ C E C K + + G GGY + +VAD ++V +P+
Sbjct: 86 GVPWLYSACGYCEHCLQGWETLCEK-------QQNTGYSVNGGYGEYVVADPNYVGLLPD 138
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
AP+LCAG+TVY L+ +PG ++A+AMG++V +
Sbjct: 139 KVGFVEIAPILCAGVTVYKGLKVTD-TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
+K + A RLGA+ + +RD D +Q +G G++ T + IG+++
Sbjct: 198 IDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRG 256
Query: 272 GKLVLVGAPEKPLELPAFSLLM 293
G + L G P P F +++
Sbjct: 257 GTIALNGLPPGDFGTPIFDVVL 278
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
+V ++ CG+CH+DLH +W P++PGHE VG+V EVG V+ KVGD+VG+
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
+ +C CD C E C ++ + G GGY++ A +VV+IP+
Sbjct: 87 WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
+ AP+ CAG+T Y L+ G KPG ++AKAMG+ V +
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
+K E + LGAD + +D M+ +G + + T + ++ G
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAFSLLM 293
VLVG P + + +P F ++
Sbjct: 258 VLVGLPPEEMPIPIFDTVL 276
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
+V ++ CG+CH+DLH +W P++PGHE VG+V EVG V+ KVGD+VG+
Sbjct: 27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
+ +C CD C E C ++ + G GGY++ A +VV+IP+
Sbjct: 87 WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
+ AP+ CAG+T Y L+ G KPG ++AKAMG+ V +
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
+K E + LGAD + +D M+ +G + + T + ++ G
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAFSLLM 293
VLVG P + + +P F ++
Sbjct: 258 VLVGLPPEEMPIPIFDTVL 276
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G V K+ G+CH+DLH + +W P +PGHE VG V VGS V++ K GD+V
Sbjct: 30 GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
G+ + +C C+ C E C ++ + G GGY++ ++AD ++V +P+
Sbjct: 90 GIPWLYTACGCCEHCLTGWETLC-------ESQQNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
AP+LCAG+TVY L+ +PG ++A+AMG+ V I
Sbjct: 143 NVEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAID 201
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
K E +LGA + +R +D ++A +G G++ T + IG+ +
Sbjct: 202 ID-DAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRG 260
Query: 272 GKLVLVGAPEKPLELPAFSLLM 293
G + LVG P P F +++
Sbjct: 261 GTIALVGLPPGDFPTPIFDVVL 282
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 38 KDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
++ V + G+CH+DLH +W + P+V GHE GVV +G V +K+GD G+
Sbjct: 31 NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGI 90
Query: 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156
+ GSC +C+ C + E+ CP ++ HDG+ + AD IP+GT
Sbjct: 91 KWLNGSCMACEYCELGNESNCPHADLS--GYTHDGS-----FQQYATADAVQAAHIPQGT 143
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTS 216
L AP+LCAGITVY L+ L ++AKAMG +V I
Sbjct: 144 DLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203
Query: 217 PSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMD----GIIDTVSAVHPLMPLIGLLKSQ 271
K+ E +G + F+ ++++D + A + D G+I+ + + +++
Sbjct: 204 EGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN 262
Query: 272 GKLVLVGAP 280
G VLVG P
Sbjct: 263 GTTVLVGMP 271
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 15/264 (5%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G + + G+CH+DLH + +W P +PGHE VG V+ VGS V K GD+V
Sbjct: 49 GPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRV 108
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
G+ + +C C C E C + + T G GG+++ +VAD +FV +P+
Sbjct: 109 GIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGHLPK 161
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
+ AP+LCAG+TVY L+ KPG ++A+AMG+ V +
Sbjct: 162 NIDFNEIAPVLCAGVTVYKGLKVTD-TKPGDWVVISGIGGLGHMAVQYARAMGLNVAAVD 220
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLK 269
+K + RLGA + ++ + A + G G++ T + +G++
Sbjct: 221 ID-DRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVA 279
Query: 270 SQGKLVLVGAPEKPLELPAFSLLM 293
G + L G P L F++++
Sbjct: 280 RGGTVSLNGLPPGDFPLSIFNMVL 303
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 34/300 (11%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
RA + + +CG+CH+DLH+ ++GN ++ GHE +G+V E+G+ VS +VGD
Sbjct: 22 RAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
+V V C C+ C E +C +V + G GG ++ I+VAD + V
Sbjct: 81 RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEGT-PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
++P+G P++A++ + CAG+T Y ++ G+ KPG ++AK G
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTMDGIIDTVSAVHPLM 262
KV + + K + A +++GAD + S D + ++ +G I+ V+ +
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAP--EKPLELPAFSL--------LMGEEEDSWWQHDWGDEGDSR 312
+ LK GK+V V P E L +P L+G D +G EG +
Sbjct: 248 QAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 34/300 (11%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
RA + + +CG+CH+DLH+ ++GN ++ GHE +G+V E+G+ VS +VGD
Sbjct: 22 RAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
+V V C C+ C E +C +V + G GG ++ I+VAD + V
Sbjct: 81 RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEGT-PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
++P+G P++A++ + CAG+T Y ++ G+ KPG ++AK G
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTMDGIIDTVSAVHPLM 262
KV + + K + A +++GAD + S D + ++ +G I+ V+ +
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAP--EKPLELPAFSL--------LMGEEEDSWWQHDWGDEGDSR 312
+ LK GK+V V P E L +P L+G D +G EG +
Sbjct: 248 QAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
V KV G+CHSD+HM + +GN P+ GHEI G + EVG +V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
GD V V + G +C C I E+ C P+ + G G Y++ ++V
Sbjct: 87 GDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
++ ++ ++A APL C+GIT Y +R LD + AKA+
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
T+I +++ EA +R GAD + + QD + +D +ID + L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
L QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 29/257 (11%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
V KV G+CHSD+HM + +GN P+ GHEI G + EVG +V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
GD V V G +C C I E+ C P+ + G G Y++ ++V
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
++ ++ ++A APL C+GIT Y +R LD + AKA+
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
T+I +++ EA +R GAD + + QD + +D +ID ++ L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
L QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
V K+ G+CHSD+HM + +GN P+ GHEI G + EVG +V +
Sbjct: 27 QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSDIMVADEHF 148
GD V V G +C C I E+ C P+ + +DG Y Y ++V +
Sbjct: 87 GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPR----WLGINYDG--AYAEY--VLVPHYKY 137
Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
+ ++ + ++A APL C+G+T Y +R LD + AKA+
Sbjct: 138 LYKLRRLSAVEA-APLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVS- 195
Query: 209 KVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLM 262
T+I +++ EA +R GAD + + QD + D +ID ++ L
Sbjct: 196 GATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLS 255
Query: 263 PLIGLLKSQGKLVLVG 278
+L QGK V+VG
Sbjct: 256 IYPYVLAKQGKYVMVG 271
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
V KV G+CHSD+HM + +GN P+ GHEI G + EVG +V +
Sbjct: 27 QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
GD V V G +C C I E+ C P+ + G G Y++ ++V
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
++ ++ ++A APL C+GIT Y +R LD + AKA+
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
T+I +++ EA +R GAD + + QD + +D +ID + L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVG 278
L QGK V+VG
Sbjct: 255 SVYPKALAKQGKYVMVG 271
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 106/256 (41%), Gaps = 27/256 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
V KV G+CHSD+H + +GN P+ GHEI G + EVG +V +
Sbjct: 27 QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
GD V V G +C C I E+ C P+ + G G Y++ ++V
Sbjct: 87 GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
+ ++ ++A APL C+GIT Y +R LD + AKA+
Sbjct: 137 YXYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLM 262
+ + EA +R GAD + + QD + +D +ID ++ L
Sbjct: 196 GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLS 255
Query: 263 PLIGLLKSQGKLVLVG 278
L QGK V VG
Sbjct: 256 VYPKALAKQGKYVXVG 271
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP---GHEIVGVVTEVGSKVSKFK 89
R G DV ++ G+CH+DLH+++ W + P +P GHE VG + EV V +
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 90 VGDKVGVGCMV--GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
GD V + V G+C +C + + +C N G GG+++ M
Sbjct: 97 KGDPVILHPAVTDGTCLACRAGE---DMHC-------ENLEFPGLNIDGGFAEFMRTSHR 146
Query: 148 FVVRIPEGT---PLDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXXXXXXXXXXXXKFA 203
V+++P+ L APL AGIT Y ++ PG +
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206
Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
K M + +K + ERLGAD + +R +D ++ M G V+ M
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRG-----RGVNVAMD 260
Query: 264 LIG----------LLKSQGKLVLVG 278
+G LL G+L++VG
Sbjct: 261 FVGSQATVDYTPYLLGRMGRLIIVG 285
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
G ++ KVT G+CHSD+ ++ Y P+ GHE VG V E+G V+ F VGD
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRI 152
V V G C +C +CA ENYC + G + G ++ M+ D +V I
Sbjct: 84 VAVYGPWG-CGACHACARGRENYCTRA--ADLGITPPGLGSPGSMAEYMIVDSARHLVPI 140
Query: 153 PEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
+ P+ A APL AG+T Y + R L PG
Sbjct: 141 GDLDPV-AAAPLTDAGLTPYHAISRVLPLLGPG 172
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 38 KDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
++V ++ G+C +DL + K + PI+ GHE G + EVG +++K K GD V
Sbjct: 29 EEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVKKGDNVV 87
Query: 96 VGCMVG--SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM-VADEHFVVRI 152
V G +CR C N C N+ G T GG+S+ M V ++V++
Sbjct: 88 VYATWGDLTCRYCREGKF---NICK-------NQIIPGQTTNGGFSEYMLVKSSRWLVKL 137
Query: 153 PEGTPLDATAPLLCAGITVYSPLR-----FYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
+P++A APL AG T +R +P + KA+
Sbjct: 138 NSLSPVEA-APLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALM 194
Query: 208 VKVTVISTSPSKKSE--AIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVSAVHP 260
+T++ S SKK A+E LGAD VS +D DG+ ID V
Sbjct: 195 KNITIVGISRSKKHRDFALE-LGAD--YVSEMKDAESLINKLTDGLGASIAIDLVGTEET 251
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
L LL +G ++LVG K + L AF
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAF 280
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
K+V K+ GIC +D H+IK + +P++ GHE G+V +G V+ K GDKV +
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
+ CR C++C N C + +T DGT + +++ V
Sbjct: 92 LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
DE V +I + P + + C T Y G KPG
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 191
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
K+V K+ GIC +D H+IK + +P++ GHE G+V +G V+ K GDKV +
Sbjct: 34 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
+ CR C++C N C + +T DGT + +++ V
Sbjct: 92 LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
DE V +I + P + + C T Y G KPG
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 191
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 24/235 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ + +CH+D + + ++P + GHE G+V VG V++ + GD V + C
Sbjct: 35 EVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV-IPC 93
Query: 99 MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
CR C C N C KV IM K YH GT T+ Y+
Sbjct: 94 YQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYT- 152
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
V + V +I PLD L C T + +PG
Sbjct: 153 --VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVA 210
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID 253
+ AK G + SKK E ++ G + F+ +D D+ + + DG +D
Sbjct: 211 EGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVD 265
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 28/273 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G D+ KV CGIC +D H++ E+ +T P+ GHE G+V E GS V G ++
Sbjct: 46 GPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
G SC C C N C N G GG+++ ++ IP
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLC-------RNLRAIGIHRDGGFAEYVLVPRKQAFEIP-- 154
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLD----KPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
LD C + +G+D K G + A+ G
Sbjct: 155 LTLDPVHGAFCEPLACC----LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTV 210
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPL 264
++ST + K E +GA + + D ++A G +D +I+ +
Sbjct: 211 ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270
Query: 265 IGLLKSQGKLVLVGA-PE-KPLELPAFSLLMGE 295
L K+ G +V++G P+ + +E+ F +L E
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRE 303
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 40 VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
+ ++ G+C SD+HM + E PI+ GHE G V EV + G+ + G +
Sbjct: 45 ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN-GELLKPGDL 103
Query: 100 VG-----SCRSCDSCAIDLENY-CPKVIMTYANKYHDGTITY----GGYSDIMVAD-EHF 148
+ +C C C + E Y CP + N+ G Y G YS +V D E
Sbjct: 104 IVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRGCYSSHIVLDPETD 160
Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
V+++ E LD A +C+G T Y Y G A+++G
Sbjct: 161 VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGA 220
Query: 209 K-VTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQAAMGTMDG-----IIDTVSAVH 259
+ V VI+ SP++ A E +GAD L R+ ++ +A M G I++
Sbjct: 221 ENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSR 279
Query: 260 PLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLM 293
L+ LL+ G + G P+ P+ + L+
Sbjct: 280 ALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLV 315
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 25/277 (9%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GICH+D H++ T P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAVGICHTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
C C C NYC K + DGT + +S V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
DE+ V +I +PL+ + C T Y PG K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
A G ++ + + K ++A E LGA + +D + +Q + M DG +D +
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ +M L+ ++ G V+VG P L +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V KV + +CH+D + + ++P V GHE G+V VG V++ + GD V + C
Sbjct: 53 EVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV-IPC 111
Query: 99 MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
CR C C N C KV +M K YH GT T+ Y+
Sbjct: 112 YQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 170
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
V + V +I PL+ L C T + +PG
Sbjct: 171 --VVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 228
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID 253
+ AKA G + SKK + + G F+ ++ ++ Q + DG +D
Sbjct: 229 EGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDGGVD 283
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 34/275 (12%)
Query: 32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
R+ G+ +V KV G+CH+DL +++++ P V GHE G++ +G V++ +VG
Sbjct: 27 RQPQGD-EVLVKVVATGMCHTDL-IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG 84
Query: 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS----DIMVADEH 147
D V + G C C C YC + + + G + G ++ D V ++H
Sbjct: 85 DHVVLS--YGYCGKCTQCNTGNPAYCSE----FFGRNFSGADSEGNHALCTHDQGVVNDH 138
Query: 148 F----------------VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXX 190
F V++ + P++ PL C GI + L P
Sbjct: 139 FFAQSSFATYALSRENNTVKVTKDVPIELLGPLGC-GIQTGAGACINALKVTPASSFVTW 197
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
AK G + + + E ++LGA + S+ QD + A DG
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 251 ----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281
+++ + L + L GK+ +VGAP+
Sbjct: 258 GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ 292
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V KV GIC SD H+ + YP V GHE GV+ VG V +VG++V V
Sbjct: 46 EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156
+V SC C C+I N C + + G GG+S+ V +IPE
Sbjct: 106 VV-SCGHCYPCSIGKPNVCTTLAVL-------GVHADGGFSEYAVVPAKNAWKIPEAV 155
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 37 EKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
E +V ++ + GIC SD+H ++ + I P+V GHE G V +VG V K GD+
Sbjct: 28 EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDR 87
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V V V CR C C N CP +T+ D G + V F ++P
Sbjct: 88 VAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKLP 140
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVI 213
+ L+ A L + V++ R G+ + G AKA G V
Sbjct: 141 DNVSLEEGALLEPLSVGVHA-CRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCT 198
Query: 214 STSPSKKSEAIERLGADSFLV--------SRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 264
+ SP ++ E + GAD LV S + +++A+G + + S + +
Sbjct: 199 ARSP-RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIG 257
Query: 265 IGLLKSQGKLVLVGAPEKPLELP 287
I + ++ G L+LVG + + +P
Sbjct: 258 INITRTGGTLMLVGMGSQMVTVP 280
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
+V K+ GIC SD H++ GN + P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAAGICRSDEHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97 GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
C C C NYC K + DGT + +S
Sbjct: 91 PLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVY 172
V DE+ V +I +PL+ + C T Y
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 105/284 (36%), Gaps = 40/284 (14%)
Query: 38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
++ K+ G+CH+DL+ + +P+V GHE G+V VG V++F+ G+KV +
Sbjct: 34 NEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV-IP 92
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------------GTITYGG 137
+ C C C N C K +AN+ D GT T+
Sbjct: 93 LFISQCGECRFCQSPKTNQCVK---GWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQ 149
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXX 197
Y+ V ++ V +I PLD L C T + +PG
Sbjct: 150 YT---VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGL 206
Query: 198 XXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGI 251
+ G K + K E + GA F+ D E + G +D
Sbjct: 207 AAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFS 266
Query: 252 IDTVSAVHPLM-PLIGLLKSQGKLVLVG------APEKPLELPA 288
++ V V + L LK G VLVG +P++L A
Sbjct: 267 LECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA 310
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 114/292 (39%), Gaps = 30/292 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC +D H++ T P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
C C C NYC K + DGT + +S V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
DE+ V +I +PL+ + C T Y PG K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
A G ++ + + K ++A E LGA + +D + +Q + M DG +D +
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGEEEDSWWQHDWG 306
+ +M L+ ++ G V+VG P + L + LL G +W +G
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGR---TWKGAVYG 320
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 25/277 (9%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC +D H++ T P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAVGICRTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
C C C NYC K + DGT + +S V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
DE+ V +I +PL+ + C T Y PG K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
A G ++ + + K ++A E LGA + +D + +Q + M DG +D +
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ +M L+ ++ G V+VG P L +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 25/277 (9%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC +D H++ T P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
+ C C C NYC K + DGT + +S V
Sbjct: 93 AIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
DE+ V +I +PL+ + C T Y PG K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
A G ++ + + K ++A E LGA + +D + +Q + M DG +D +
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ +M L+ ++ G V+VG P L +L+
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLL 308
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 114/292 (39%), Gaps = 30/292 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC +D H++ T P++ GHE G+V VG V+ K GDKV +
Sbjct: 35 EVRIKMVAVGICGTDDHVVSGNL-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
C C C NYC K + DGT + +S V
Sbjct: 93 FTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
DE+ V +I +PL+ + C T Y PG K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
A G ++ + + K ++A E LGA + +D + +Q + M DG +D +
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGEEEDSWWQHDWG 306
+ +M L+ ++ G V+VG P + L + LL G +W +G
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGR---TWKGAVYG 320
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ + P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
+ C C C N C K + DGT + +S V D
Sbjct: 93 FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVY 172
E V +I +PL+ + C T Y
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGY 179
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ + P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
+ C C C N C K + DGT + +S V D
Sbjct: 93 FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVY 172
E V +I +PL+ + C T Y
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGY 179
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V ++ +CH+D +I +++ +P++ GHE G+V +G V+ K GDKV +
Sbjct: 37 EVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-IPL 95
Query: 99 MVGSCRSCDSCAIDLENYCPKV 120
CR C C L N C K+
Sbjct: 96 YAPLCRKCKFCLSPLTNLCGKI 117
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD ++K E + +P++ GHE VGVV +G+ V+ K GDKV +
Sbjct: 36 EVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPL 93
Query: 99 MVGSCRSCDSCAIDLENYCPK 119
V C SC +C N+C K
Sbjct: 94 FVPQCGSCRACKSSNSNFCEK 114
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ +CH+D + + +P++ GHE G+V VG V+K K GD V +
Sbjct: 34 EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
+ C C C N C K+ +T DGT + Y G +S+ V
Sbjct: 93 YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
+ V +I PLD L C T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ +CH+D + + +P++ GHE G+V VG V+K K GD V +
Sbjct: 33 EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
+ C C C N C K+ +T DGT + Y G +S+ V
Sbjct: 92 YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
+ V +I PLD L C T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ +CH+D + + +P++ GHE G+V VG V+K K GD V +
Sbjct: 34 EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
+ C C C N C K+ +T DGT + Y G +S+ V
Sbjct: 93 YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
+ V +I PLD L C T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 ATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 42/232 (18%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +DLH+ + NEW + P + GHE+ G V EVG V +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD------- 145
+ V + C C +C + + C + + DG + Y+ + +
Sbjct: 88 YISVETHI-VCGKCYACKHNRYHVCQNTKIFGVDM--DGVFAH--YAIVPAKNAWKNPKD 142
Query: 146 ---EHFVVRIPEGTPLDATAPLLCAG----ITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
E+ ++ P G +D AG IT PL G+
Sbjct: 143 MPPEYAALQEPLGNAVDTVLAGPIAGRSTLITGAGPLGLLGI------------------ 184
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
AKA G ++S + + +++GAD + ++D ++ M DG
Sbjct: 185 --AVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDG 234
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD H++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +DLH+ + NEW + P + GHE+ G V E+G V +VGD
Sbjct: 27 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V V + C C +C + C N G T G +++ V + +
Sbjct: 87 YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 138
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
P+ P + PL A TV + P+ G AKA G
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 191
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
++S + E +++GAD + ++D ++ DG
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 233
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +DLH+ + NEW + P + GHE+ G V E+G V +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V V + C C +C + C N G T G +++ V + +
Sbjct: 88 YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 139
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
P+ P + PL A TV + P+ G AKA G
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 192
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
++S + E +++GAD + ++D ++ DG
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 234
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V +V +CH+D++ + ++P+V GHE G+V VG V+ FK GDKV +
Sbjct: 35 EVRIQVIATCVCHTDINA-TDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV 120
C+ C C L N C K+
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKL 114
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEW--GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G ++ +V IC +DLH+ K + W G P+V GHE GVV VG V + +VGD
Sbjct: 24 GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V + + C +C +C + C N G GG+++ +V
Sbjct: 84 HVSLESHI-VCHACPACRTGNYHVC-------LNTQILGVDRDGGFAEYVVVPAENAWVN 135
Query: 153 PEGTPLDATAPLLCAGITVYS 173
P+ P + A L G V++
Sbjct: 136 PKDLPFEVAAILEPFGNAVHT 156
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 16/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ GIC SD ++ T P++ GHE G+V +G V+ + GDKV +
Sbjct: 35 EVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
C C C N+C K ++ DGT + +S V
Sbjct: 93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
DE V +I +PL+ + C T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ +CH+D + + +P++ GH G+V VG V+K K GD V +
Sbjct: 33 EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
+ C C C N C K+ +T DGT + Y G +S+ V
Sbjct: 92 YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
+ V +I PLD L C T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 36/207 (17%)
Query: 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
VL F A G + V + G+ D + + P G E GVV VG
Sbjct: 15 VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGD 74
Query: 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
+V++FKVGD+V G T G YS++ V
Sbjct: 75 EVTRFKVGDRVAYG----------------------------------TGPLGAYSEVHV 100
Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXXXXXXXXXKF 202
E +V++ + + A L+ G+TV LR KPG + ++
Sbjct: 101 LPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW 160
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGA 229
AKA+G K+ +SP K + A + LGA
Sbjct: 161 AKALGAKLIGTVSSPEKAAHA-KALGA 186
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 37 EKDVTFKVTHCGICHSDL-HMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+ +V K+ G+C SDL + KN G YPI GHE G + VGS V GD V
Sbjct: 25 QDEVRVKIASSGLCGSDLPRIFKN--GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVA 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
++ C +C C + C K G+ GG+++ +V V +P
Sbjct: 83 CVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134
Query: 156 TPLD 159
P++
Sbjct: 135 MPIE 138
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 37 EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
E V KV IC SD HM++ + +V GHEI G V E G V ++GD V V
Sbjct: 33 EHGVILKVVSTNICGSDQHMVRGRTTAQV-GLVLGHEITGEVIEKGRDVENLQIGDLVSV 91
Query: 97 GCMV--GSCRSC 106
V G CRSC
Sbjct: 92 PFNVACGRCRSC 103
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 13/209 (6%)
Query: 35 TGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
GE D+ + + + D +++ G + +P VP + GVV VG V++F+ GD+
Sbjct: 51 AGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDR 110
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V G L+ P T A + G G S+ +V E + V P
Sbjct: 111 VISTFAPGW----------LDGLRPGTGRTPAYETLGGA-HPGVLSEYVVLPEGWFVAAP 159
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVI 213
+ + L CAG+T + L G + G + AKA G +V V
Sbjct: 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVT 219
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQ 242
S+S K A LGAD + ++D ++
Sbjct: 220 SSSREKLDRAFA-LGADHGINRLEEDWVE 247
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
N GW K+ R G D + C SD+H + ++ G
Sbjct: 10 NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72 HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
HE VG V EVGS+V FK GD+V V C RS + A + + ++ + + + D
Sbjct: 59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
G +G Y + AD + + +P+ PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 83/232 (35%), Gaps = 26/232 (11%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEW-------GNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
++ KV CGIC SD+H + + G T +P+ GHE GVV E G + +
Sbjct: 57 EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 92 DKVGVGCMVGS-----CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE 146
+ +G V + C C CA N+C N G G +++ + D
Sbjct: 117 KRFEIGEPVCAEEXLWCGHCRPCAEGFPNHC-------ENLNELGFNVDGAFAEYVKVDA 169
Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFY-------GLDKPGMXXXXXXXXXXXXXX 199
+ + E + L AG V Y G +PG
Sbjct: 170 KYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAA 229
Query: 200 XKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
K G ++S + + LGAD + ++ ++A + +G+
Sbjct: 230 VAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGL 281
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 39 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V +V +C +D++ + ++P+V GHE G+V VG V+ FK GDKV +
Sbjct: 35 EVRIQVIATCVCPTDINA-TDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99 MVGSCRSCDSCAIDLENYCPKV 120
C+ C C L N C K+
Sbjct: 93 FAPQCKRCKLCLSPLTNLCGKL 114
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
N GW K+ R G D + C SD+H + ++ G
Sbjct: 10 NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72 HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
HE VG V EVGS+V FK GD+V V C RS + A + + ++ + + + D
Sbjct: 59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
G +G Y + AD + + +P+ PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
N GW K+ R G D + C SD+H + ++ G
Sbjct: 10 NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72 HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
HE VG V EVGS+V FK GD+V V C RS + A + + ++ + + + D
Sbjct: 59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
G +G Y + AD + + +P+ PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 21/254 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V ++ GIC SD+H + GN I P+V GHE G V +VGS V K GD
Sbjct: 30 GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93 KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
+V + G+ R D C + N P + A DG + + F +
Sbjct: 90 RVAI--EPGAPRENDEFCKMGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
+P+ + A + + +++ R G G AKAMG
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
V++ + + + +GAD L +S++ + ++ +G + I+ A +
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
I +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
N GW K+ R G D + C SD+H + ++ G
Sbjct: 10 NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72 HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG 131
HE VG V EVGS+V FK GD+V V C RS + A ++ + + + DG
Sbjct: 59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDG 118
Query: 132 TITYGGYSDIMVADEHFVVRIPEGTPLD 159
+G Y + AD + + +P+ PL+
Sbjct: 119 --VFGEYFHVNDADMNLAI-LPKDMPLE 143
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V K+ GIC SD+H ++ G+ + P+V GHE G V +VGS V + GD
Sbjct: 29 GPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGD 88
Query: 93 KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
+V + G+ R D C I N P + A DG + + +F +
Sbjct: 89 RVAI--QPGAPRQTDEFCKIGRYNLSPTIFFC-ATPPDDGNLC-----RFYKHNANFCYK 140
Query: 152 IPEGTPLDATA---PLLC-------AGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 201
+P+ + A PL AG+T+ + + G G+
Sbjct: 141 LPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLA----------- 189
Query: 202 FAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-ID 253
AKAMG +V V S S+ S+A E +GAD L +S + E ++ +G+ + I+
Sbjct: 190 -AKAMGAAQVVVTDLSASRLSKAKE-VGADFILEISNESPEEIAKKVEGLLGSKPEVTIE 247
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVG 278
+ I S G LVLVG
Sbjct: 248 CTGVETSIQAGIYATHSGGTLVLVG 272
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 29 HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI--VPGHEIVGVVTEVGSKVS 86
H +R+ E V KV IC SD H+ + G I P V GHEI G V E GS V
Sbjct: 26 HNNRKL--EHAVILKVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSDVE 80
Query: 87 KFKVGDKVGVGCMV--GSCRSC-----DSCAIDLEN 115
+GD V V V G CR+C D C +L N
Sbjct: 81 LMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVN 116
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 37 EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFKV 90
E +VT V GIC SD+H K+ I P+ V GHE G V V V KV
Sbjct: 40 EGEVTVAVRSTGICGSDVHFWKH---GCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKV 96
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
GD+V + V C +C+ C N C +V
Sbjct: 97 GDRVAIEPQV-ICNACEPCLTGRYNGCERV 125
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 21/254 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V + GIC SD+H + GN I P V GHE G V +VGS V K GD
Sbjct: 30 GPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93 KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
+V + G+ R D C N P + A DG + + F +
Sbjct: 90 RVAI--EPGAPRENDEFCKXGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
+P+ + A + + +++ R G G AKA G
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
V++ + + + +GAD L +S++ + ++ +G + I+ A +
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
I +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 110/295 (37%), Gaps = 63/295 (21%)
Query: 23 GVLSPFHFSRRATGEK---DVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVV 78
G L+ R+A E ++ +V CG+ DL + + N P+VPG E G+V
Sbjct: 13 GGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIV 72
Query: 79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY 138
+G V +++GD+V M + N Y +
Sbjct: 73 EALGDSVKGYEIGDRV---------------------------MAFVN--------YNAW 97
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
++++ FV +IP+ A +T Y L + GM
Sbjct: 98 AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQ 157
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-----AAMGTMDGIID 253
+ VTV T+ + K EAI+ + + L R+ D +Q +A G +D ++D
Sbjct: 158 AVAQLCSTVPNVTVFGTASTFKHEAIK--DSVTHLFDRNADYVQEVKRISAEG-VDIVLD 214
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEED------SWWQ 302
+ + L LLK G +L G+ +++ GE + SWWQ
Sbjct: 215 CLCGDNTGKGL-SLLKPLGTYILYGSS---------NMVTGETKSFFSFAKSWWQ 259
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 37 EKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+ V KV CG+ + ++ + + P PG ++ GV+ VG S FK GD+V
Sbjct: 57 DHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV- 115
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+ TI+ GGY++ +A +H V ++PE
Sbjct: 116 --------------------------------FTSSTIS-GGYAEYALAADHTVYKLPEK 142
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX-KFAKAMGVKVTVIS 214
A + T Y L K G + A+A G+K ++
Sbjct: 143 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK--ILG 200
Query: 215 TSPSKKSEAIE-RLGADSFLVSRDQ---DEMQAAMGT--MDGIIDTVSAVHPLMPLIGLL 268
T+ +++ + I + GA R+ D+++ +G +D II+ ++ V+ L + LL
Sbjct: 201 TAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLL 259
Query: 269 KSQGKLVLVGA 279
G++++VG+
Sbjct: 260 SHGGRVIVVGS 270
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
+ A G D + C SD+H + + ++ GHE VG V EVGS+V FK G
Sbjct: 19 KPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPG 78
Query: 92 DKVGVGCMVGSCRSCD 107
D+V V + R+ +
Sbjct: 79 DRVVVPAITPDWRTSE 94
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
+ A G D + C SD+H + + ++ GHE VG V EVGS+V FK G
Sbjct: 19 KPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPG 78
Query: 92 DKVGVGCMVGSCRSCD 107
D+V V + R+ +
Sbjct: 79 DRVVVPAITPDWRTSE 94
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G K+V ++ + H D+ + K + P V G + GVV VG V F GD+V
Sbjct: 26 GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
+ + SC C+ C +N CP+ + G +G Y++ +V E + P+
Sbjct: 86 VINPGL-SCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPK 137
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMX-----XXXXXXXXXXXXXXKFAKAMGVK 209
+ A + +T + + +DK G+ + AK G +
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMV----VDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR 193
Query: 210 VTVISTSPSKKSEAIERLGAD 230
V + S K A + LGAD
Sbjct: 194 VIATAGSEDKLRRA-KALGAD 213
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
A G D + C SD+H + + ++ GHE VG V EVGS+V FK GD+
Sbjct: 21 APGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDR 80
Query: 94 VGVGCMVGSCRSCD 107
V V + R+ +
Sbjct: 81 VVVPAITPDWRTSE 94
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
A G D + C SD+H + + ++ GHE VG V EVGS+V FK GD+
Sbjct: 21 APGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDR 80
Query: 94 VGVGCMVGSCRSCD 107
V V + R+ +
Sbjct: 81 VVVPAITPDWRTSE 94
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 31 SRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90
+ A G D + C SD+H + + ++ GHE VG V EVGS+V FK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKP 77
Query: 91 GDKVGVGCMVGSCRSCD 107
GD+V V + R+ +
Sbjct: 78 GDRVVVPAITPDWRTSE 94
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 50 CHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
C SD H + W I + ++ GHE VG + +VGS V + KVGDKV
Sbjct: 37 CTSDTHTV---WAGAIGDRHDMILGHEAVGQIVKVGSLVKRLKVGDKV 81
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 50 CHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
C SD H + W I + ++ GHE VG + +VGS V + KVGDKV
Sbjct: 37 CTSDTHTV---WAGAIGDRHDMILGHEAVGQIVKVGSLVKRLKVGDKV 81
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 94/268 (35%), Gaps = 52/268 (19%)
Query: 16 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-IVPGHEI 74
W K G L E +V +V G+ +D M + ++P +PG E+
Sbjct: 4 WVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEV 63
Query: 75 VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT 134
VGVV + + +
Sbjct: 64 VGVVE----------------------------------------------GRRYAALVP 77
Query: 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXX 193
GG ++ + + ++ +PEG + A + +T Y L+ +PG
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAG 136
Query: 194 XXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
+ A+AMG++V ++ P K + + LGA+ + E A G +D +++
Sbjct: 137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAWGGLDLVLE 195
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPE 281
+ +GLL G+LV +GA E
Sbjct: 196 VRG--KEVEESLGLLAHGGRLVYIGAAE 221
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 96/273 (35%), Gaps = 53/273 (19%)
Query: 16 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-IVPGHEI 74
W K G L E +V +V G+ +D M + ++P +PG E+
Sbjct: 4 WVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEV 63
Query: 75 VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT 134
VGVV + + +
Sbjct: 64 VGVVE----------------------------------------------GRRYAALVP 77
Query: 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXX 193
GG ++ + + ++ +PEG + A + +T Y L+ +PG
Sbjct: 78 QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAG 136
Query: 194 XXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
+ A+AMG++V ++ P K + + LGA+ + E A G +D +++
Sbjct: 137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAWGGLDLVLE 195
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL 286
+ +GLL G+LV + AP PL L
Sbjct: 196 VRG--KEVEESLGLLAHGGRLVYI-APIPPLRL 225
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 34/150 (22%)
Query: 37 EKDVTFKVTHCGICHSD-LHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
E DV +V + + + D L I + P VPG ++ GVV V S+ +F+ GD+V
Sbjct: 30 EGDVLVRVHYSSVNYKDGLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRFREGDEV- 86
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
A Y G +GGYS+ ++V +P+G
Sbjct: 87 ----------------------------IATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
L + AG T + L + L++ G+
Sbjct: 119 LTLKEAXAIGTAGFT--AALSIHRLEEHGL 146
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 81/223 (36%), Gaps = 39/223 (17%)
Query: 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVV 78
D + V+ + A DV K+ I SD++MI+ +G P V G+E V V
Sbjct: 24 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 83
Query: 79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY 138
VGS V+ K GD V AN G +
Sbjct: 84 VAVGSNVTGLKPGDWV----------------------------IPANA------GLGTW 109
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXXXXXX 197
V E ++++P PL + A L T Y L + +PG
Sbjct: 110 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 169
Query: 198 XXXKFAKAMGVK-VTVISTSP--SKKSEAIERLGADSFLVSRD 237
+ A A+G++ + V+ P K S+ ++ LGA+ + +
Sbjct: 170 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 212
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 81/223 (36%), Gaps = 39/223 (17%)
Query: 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVV 78
D + V+ + A DV K+ I SD++MI+ +G P V G+E V V
Sbjct: 37 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 96
Query: 79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY 138
VGS V+ K GD V AN G +
Sbjct: 97 VAVGSNVTGLKPGDWV----------------------------IPANA------GLGTW 122
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXXXXXX 197
V E ++++P PL + A L T Y L + +PG
Sbjct: 123 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQ 182
Query: 198 XXXKFAKAMGVK-VTVISTSP--SKKSEAIERLGADSFLVSRD 237
+ A A+G++ + V+ P K S+ ++ LGA+ + +
Sbjct: 183 AVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 225
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 81/219 (36%), Gaps = 40/219 (18%)
Query: 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
VL F+ E ++ + GI D ++ + P G E G+V++VGS
Sbjct: 15 VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGS 74
Query: 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDI-- 141
V K GD+V YA G YS +
Sbjct: 75 GVKHIKAGDRV----------------------------VYAQS------ALGAYSSVHN 100
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR-FYGLDKPGMXXXXXXXXXXXXXXX 200
++AD+ + +P + A G+TVY LR Y +
Sbjct: 101 IIADKAAI--LPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
++AKA+G K+ + + ++K+++ + GA + R++D
Sbjct: 159 QWAKALGAKL-IGTVGTAQKAQSALKAGAWQVINYREED 196
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase
From Bacillus Thuringiensis
Length = 340
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 49 ICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
I SDL I + + I P +PG+E VG+V VG+ VS+ +G +V
Sbjct: 44 INPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRV 90
>pdb|3CF4|A Chain A, Structure Of The Codh Component Of The M. Barkeri Acds
Complex
Length = 807
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Query: 2 GQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDV----------TFKVTHCGICH 51
GQ + E T G+++ A G KDV F V G
Sbjct: 495 GQVSDAEIRAEGLNLVMGTTPGIIAIIGCPNYAGGTKDVYYIAEEFLKRNFIVVTTGCGA 554
Query: 52 SDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90
D+ M K+ G T+Y PG G + +GS VS +
Sbjct: 555 MDIGMFKDADGKTLYERFPGGFQCGGLANIGSCVSNAHI 593
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 29/259 (11%)
Query: 40 VTFKVTHCGICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSKFKVGDKV 94
+ + + GIC +D ++ + + P +V GHE +GVV E F GD V
Sbjct: 29 IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE---SYHGFSQGDLV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITYGGYSDIMVADEHFVVRIP 153
G C C +C + ++C A + DG + Y D ++V+IP
Sbjct: 86 MPVNRRG-CGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYD-----DPKYLVKIP 139
Query: 154 E--------GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFA-- 203
+ PL + + V + + D + F
Sbjct: 140 KSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLL 199
Query: 204 -KAMGVKVTVISTSPSKKSE--AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH 259
+ G++V + + + E IE + + S D+++ ++G D IID A V+
Sbjct: 200 FRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVN 259
Query: 260 PLMPLIGLLKSQGKLVLVG 278
L +I LL G L L G
Sbjct: 260 ILGNVIPLLGRNGVLGLFG 278
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 87/234 (37%), Gaps = 45/234 (19%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P V G + +GVV VG++V+ F GD V
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------------- 87
Query: 127 KYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
Y+ G+ G ++ + +E V + P+ + L GIT Y L +G+ +
Sbjct: 88 -YYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNR 146
Query: 185 MXXXXXXXXXXX------XXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
+ AKA G++V + + S ++ E +++GAD L ++
Sbjct: 147 NENEGKTLLIINGAGGVGSIATQIAKAYGLRV-ITTASRNETIEWTKKMGADIVLNHKES 205
Query: 239 DEMQ---AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
Q + +D + T + +I L+K +G + + A E +L A
Sbjct: 206 LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNAL 259
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 29/259 (11%)
Query: 40 VTFKVTHCGICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSKFKVGDKV 94
+ + + GIC +D ++ + + P +V GHE +GVV E F GD V
Sbjct: 29 IKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE---SYHGFSQGDLV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITYGGYSDIMVADEHFVVRIP 153
G C C +C + ++C A + DG + Y D ++V+IP
Sbjct: 86 MPVNRRG-CGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYD-----DPKYLVKIP 139
Query: 154 E--------GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFA-- 203
+ PL + + V + + D + F
Sbjct: 140 KSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLL 199
Query: 204 -KAMGVKVTVISTSPSKKSE--AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VH 259
+ G++V + + + E IE + + S D+++ ++G D IID A V+
Sbjct: 200 FRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVN 259
Query: 260 PLMPLIGLLKSQGKLVLVG 278
L +I LL G L L G
Sbjct: 260 ILGNVIPLLGRNGVLGLFG 278
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKV-----GVGCMVGS 102
P + G ++ G V VG +V F+VGD V GVG + G+
Sbjct: 64 PAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGT 104
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
PIV G E VV EVG V+ F VG++V
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERV 88
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-M 185
+ + + GG ++ + + ++ +PEG + A + +T Y L+ +PG
Sbjct: 70 RRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK-RAQARPGEK 128
Query: 186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
+ A+A G++V ++ P K + + LGA+ + E A
Sbjct: 129 VLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLA-LGAEEAATYAEVPERAKAW 187
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281
G +D +++ + +GLL G+LV +GA E
Sbjct: 188 GGLDLVLEVRG--KEVEESLGLLAHGGRLVYIGAAE 221
>pdb|1NSY|A Chain A, Crystal Structure Of Nh3-dependent Nad+ Synthetase From
Bacillus Subtilis
pdb|1NSY|B Chain B, Crystal Structure Of Nh3-dependent Nad+ Synthetase From
Bacillus Subtilis
pdb|2NSY|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis In Complex With Nad-Adenylate
pdb|2NSY|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis In Complex With Nad-Adenylate
pdb|1EE1|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With One Molecule Atp, Two
Molecules Deamido-Nad+ And One Mg2+ Ion
pdb|1EE1|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With One Molecule Atp, Two
Molecules Deamido-Nad+ And One Mg2+ Ion
pdb|1FYD|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With One Molecule Amp, One
Pyrophosphate Ion And One Mg2+ Ion
pdb|1FYD|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With One Molecule Amp, One
Pyrophosphate Ion And One Mg2+ Ion
pdb|1IFX|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With Two Molecules
Deamido-Nad
pdb|1IFX|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
Bacillus Subtilis Complexed With Two Molecules
Deamido-Nad
pdb|1IH8|A Chain A, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis
Complexed With Amp-Cpp And Mg2+ Ions.
pdb|1IH8|B Chain B, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis
Complexed With Amp-Cpp And Mg2+ Ions.
pdb|1KQP|A Chain A, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis At 1
A Resolution
pdb|1KQP|B Chain B, Nh3-Dependent Nad+ Synthetase From Bacillus Subtilis At 1
A Resolution
Length = 271
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 261 LMPLIGLLKSQGKLVL--VGAPEKP-LELPAFSLL 292
L+PL GL K QG+ +L +GAPE+ L+ P LL
Sbjct: 178 LLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLL 212
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 42/110 (38%)
Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXX 195
GG + + E ++ IPEG L A + A +T + L G + G
Sbjct: 99 GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSG 158
Query: 196 XXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
M + +++ KK + E+LGA + + +D +A +
Sbjct: 159 VGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATL 208
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 42/110 (38%)
Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXX 195
GG + + E ++ IPEG L A + A +T + L G + G
Sbjct: 115 GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSG 174
Query: 196 XXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
M + +++ KK + E+LGA + + +D +A +
Sbjct: 175 VGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATL 224
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
+P+ G ++ GVV E G V FK GD+V
Sbjct: 94 FPLTLGRDVSGVVMECGLDVKYFKPGDEV 122
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXX 197
Y++ + A +++ E A L AG+T L + + +
Sbjct: 108 YAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGH 167
Query: 198 XXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV 255
+ AK G TVI+T+ + ++ LGA+ + ++D + A +D +ID V
Sbjct: 168 LAIQLAKQKGT--TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,597,298
Number of Sequences: 62578
Number of extensions: 397558
Number of successful extensions: 1187
Number of sequences better than 100.0: 104
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 973
Number of HSP's gapped (non-prelim): 117
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)