Query 021300
Match_columns 314
No_of_seqs 122 out of 1213
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:09:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021300.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021300hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.8E-59 3.8E-64 416.3 23.7 285 8-304 1-287 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 6.3E-57 1.4E-61 387.9 23.1 304 5-311 4-310 (360)
3 KOG0024 Sorbitol dehydrogenase 100.0 4.4E-50 9.6E-55 346.4 22.9 281 9-302 3-297 (354)
4 PLN02586 probable cinnamyl alc 100.0 4.9E-49 1.1E-53 363.2 29.5 300 1-300 1-300 (360)
5 COG1062 AdhC Zn-dependent alco 100.0 4.7E-47 1E-51 330.4 25.2 283 11-299 3-307 (366)
6 PLN02178 cinnamyl-alcohol dehy 100.0 8E-46 1.7E-50 343.2 29.9 291 11-301 5-296 (375)
7 PLN02514 cinnamyl-alcohol dehy 100.0 6.7E-45 1.4E-49 335.5 29.8 293 7-301 6-298 (357)
8 KOG0022 Alcohol dehydrogenase, 100.0 8.9E-45 1.9E-49 311.4 24.1 297 6-307 3-325 (375)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 3.1E-44 6.7E-49 332.8 28.9 287 11-300 1-314 (371)
10 PLN02740 Alcohol dehydrogenase 100.0 1.6E-43 3.4E-48 329.1 28.5 290 6-300 6-323 (381)
11 COG0604 Qor NADPH:quinone redu 100.0 3.7E-44 8.1E-49 324.7 23.5 262 11-306 1-271 (326)
12 PRK09880 L-idonate 5-dehydroge 100.0 1.7E-43 3.7E-48 324.5 26.4 281 9-301 3-289 (343)
13 PLN02827 Alcohol dehydrogenase 100.0 4.8E-43 1E-47 325.3 27.9 285 9-300 11-318 (378)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.1E-43 1.1E-47 323.2 27.5 286 10-300 1-300 (358)
15 TIGR02822 adh_fam_2 zinc-bindi 100.0 5E-43 1.1E-47 319.5 26.8 272 15-300 3-277 (329)
16 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.7E-43 1.2E-47 323.9 27.1 279 11-293 2-304 (368)
17 cd08239 THR_DH_like L-threonin 100.0 1.5E-42 3.3E-47 317.6 27.8 277 11-300 1-284 (339)
18 cd08301 alcohol_DH_plants Plan 100.0 9.4E-43 2E-47 322.7 26.7 286 10-300 2-312 (369)
19 COG1063 Tdh Threonine dehydrog 100.0 2.1E-42 4.5E-47 317.0 27.6 270 26-301 14-293 (350)
20 cd08300 alcohol_DH_class_III c 100.0 6.3E-42 1.4E-46 317.0 28.8 279 10-292 2-304 (368)
21 cd08277 liver_alcohol_DH_like 100.0 7.5E-42 1.6E-46 316.2 28.9 284 10-299 2-307 (365)
22 cd08230 glucose_DH Glucose deh 100.0 8.9E-42 1.9E-46 314.5 27.5 280 11-301 1-298 (355)
23 TIGR02819 fdhA_non_GSH formald 100.0 7E-42 1.5E-46 318.4 26.9 264 10-280 2-301 (393)
24 TIGR03201 dearomat_had 6-hydro 100.0 3.1E-40 6.6E-45 303.7 27.5 264 25-299 11-293 (349)
25 KOG1197 Predicted quinone oxid 100.0 3.7E-40 8.1E-45 275.0 19.1 256 7-299 5-267 (336)
26 cd08296 CAD_like Cinnamyl alco 100.0 5.1E-39 1.1E-43 293.7 28.1 280 11-301 1-282 (333)
27 PRK10309 galactitol-1-phosphat 100.0 3.7E-39 7.9E-44 296.2 26.7 275 11-300 1-285 (347)
28 cd05283 CAD1 Cinnamyl alcohol 100.0 1.4E-38 3E-43 291.2 29.1 278 21-300 8-285 (337)
29 cd08237 ribitol-5-phosphate_DH 100.0 2.1E-39 4.5E-44 297.2 22.9 259 21-301 10-279 (341)
30 cd08231 MDR_TM0436_like Hypoth 100.0 1.3E-38 2.8E-43 294.1 28.2 285 12-300 2-304 (361)
31 KOG0025 Zn2+-binding dehydroge 100.0 2.9E-39 6.4E-44 274.2 21.4 275 2-311 11-298 (354)
32 cd08233 butanediol_DH_like (2R 100.0 3.4E-38 7.4E-43 290.2 26.2 278 11-301 1-295 (351)
33 cd08299 alcohol_DH_class_I_II_ 100.0 1.2E-37 2.6E-42 288.8 28.7 285 9-299 6-314 (373)
34 PRK10083 putative oxidoreducta 100.0 3.4E-37 7.3E-42 282.1 26.3 276 11-299 1-280 (339)
35 cd08278 benzyl_alcohol_DH Benz 100.0 6.4E-37 1.4E-41 283.2 28.2 285 10-300 2-309 (365)
36 cd08285 NADP_ADH NADP(H)-depen 100.0 9E-37 1.9E-41 280.8 25.1 262 11-282 1-270 (351)
37 cd05279 Zn_ADH1 Liver alcohol 100.0 2.8E-36 6.1E-41 278.9 28.2 274 22-299 10-307 (365)
38 PRK09422 ethanol-active dehydr 100.0 3.4E-36 7.4E-41 275.3 28.0 278 11-300 1-283 (338)
39 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.3E-36 5.1E-41 273.0 24.0 280 11-300 1-287 (306)
40 cd05284 arabinose_DH_like D-ar 100.0 5.6E-36 1.2E-40 274.1 26.6 277 11-299 1-286 (340)
41 TIGR03366 HpnZ_proposed putati 100.0 3.4E-36 7.4E-41 268.6 23.7 228 69-301 1-243 (280)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.9E-36 6.2E-41 272.6 22.5 247 11-300 2-253 (308)
43 cd08246 crotonyl_coA_red croto 100.0 2.1E-35 4.6E-40 275.7 28.2 286 6-300 8-338 (393)
44 cd08279 Zn_ADH_class_III Class 100.0 2.7E-35 5.8E-40 272.2 28.4 284 11-299 1-305 (363)
45 cd08283 FDH_like_1 Glutathione 100.0 2.6E-35 5.6E-40 274.4 27.9 284 11-300 1-329 (386)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.5E-35 7.5E-40 269.5 28.2 278 11-299 1-288 (345)
47 cd05278 FDH_like Formaldehyde 100.0 2.1E-35 4.4E-40 271.0 26.7 279 11-299 1-289 (347)
48 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.4E-35 5.2E-40 271.2 26.6 278 11-299 1-296 (350)
49 cd08286 FDH_like_ADH2 formalde 100.0 2.6E-35 5.6E-40 270.4 26.3 279 11-300 1-288 (345)
50 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.5E-35 7.5E-40 267.2 26.4 272 11-299 1-275 (325)
51 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.7E-35 1E-39 269.2 26.1 278 11-299 1-295 (350)
52 PRK13771 putative alcohol dehy 100.0 4.8E-35 1E-39 267.3 25.5 274 11-299 1-278 (334)
53 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.6E-34 3.4E-39 263.9 27.2 279 11-299 1-284 (338)
54 TIGR01751 crot-CoA-red crotony 100.0 1.2E-34 2.7E-39 270.9 27.1 284 7-299 4-332 (398)
55 cd08297 CAD3 Cinnamyl alcohol 100.0 2.2E-34 4.7E-39 263.7 28.0 280 11-300 1-288 (341)
56 PRK05396 tdh L-threonine 3-deh 100.0 1.4E-34 3.1E-39 265.1 25.8 276 11-300 1-285 (341)
57 PLN02702 L-idonate 5-dehydroge 100.0 3.2E-34 7E-39 265.1 28.3 270 22-300 26-307 (364)
58 cd08298 CAD2 Cinnamyl alcohol 100.0 2.6E-34 5.5E-39 261.9 27.1 257 11-281 1-259 (329)
59 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.4E-34 7.3E-39 262.1 26.4 274 11-299 1-279 (337)
60 cd08245 CAD Cinnamyl alcohol d 100.0 6E-34 1.3E-38 259.6 27.2 276 13-299 2-278 (330)
61 cd08238 sorbose_phosphate_red 100.0 2.3E-34 4.9E-39 270.1 24.4 266 11-300 3-313 (410)
62 cd08265 Zn_ADH3 Alcohol dehydr 100.0 5.4E-34 1.2E-38 265.4 26.6 266 24-299 38-328 (384)
63 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.1E-34 1.5E-38 263.1 26.5 284 11-299 1-310 (367)
64 cd08291 ETR_like_1 2-enoyl thi 100.0 3.3E-34 7.2E-39 260.9 23.9 251 11-299 1-265 (324)
65 cd08284 FDH_like_2 Glutathione 100.0 1.2E-33 2.6E-38 259.1 27.4 279 11-300 1-289 (344)
66 cd05285 sorbitol_DH Sorbitol d 100.0 2.5E-33 5.5E-38 257.0 27.8 268 23-300 8-287 (343)
67 cd08282 PFDH_like Pseudomonas 100.0 2.2E-33 4.8E-38 260.5 27.7 262 11-280 1-287 (375)
68 cd08242 MDR_like Medium chain 100.0 1.7E-33 3.6E-38 255.6 25.8 266 11-300 1-267 (319)
69 cd08292 ETR_like_2 2-enoyl thi 100.0 1.3E-33 2.8E-38 256.4 25.0 252 11-300 1-261 (324)
70 cd08232 idonate-5-DH L-idonate 100.0 3E-33 6.6E-38 256.0 27.3 271 22-299 6-283 (339)
71 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.2E-33 4.8E-38 257.0 26.3 266 11-300 1-286 (341)
72 cd08287 FDH_like_ADH3 formalde 100.0 3E-33 6.5E-38 256.6 27.0 277 11-300 1-290 (345)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 3.9E-33 8.5E-38 253.9 27.5 275 11-299 1-278 (332)
74 cd08235 iditol_2_DH_like L-idi 100.0 3.4E-33 7.4E-38 256.0 26.5 275 11-299 1-288 (343)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 4.2E-33 9E-38 254.1 26.7 279 11-299 1-287 (342)
76 cd08236 sugar_DH NAD(P)-depend 100.0 7.8E-33 1.7E-37 253.7 25.9 274 11-299 1-282 (343)
77 cd08293 PTGR2 Prostaglandin re 100.0 4.2E-33 9.1E-38 255.6 23.3 222 21-280 19-256 (345)
78 cd08295 double_bond_reductase_ 100.0 9.5E-33 2.1E-37 252.8 25.1 250 11-300 8-279 (338)
79 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.9E-32 4.1E-37 250.2 25.0 252 12-299 1-265 (336)
80 cd08274 MDR9 Medium chain dehy 100.0 2.6E-32 5.5E-37 250.8 25.5 269 11-299 1-295 (350)
81 cd05281 TDH Threonine dehydrog 100.0 2.9E-32 6.2E-37 249.9 25.7 275 11-299 1-284 (341)
82 PLN03154 putative allyl alcoho 100.0 2.5E-32 5.4E-37 250.9 25.0 251 11-300 9-286 (348)
83 cd08234 threonine_DH_like L-th 100.0 5.4E-32 1.2E-36 247.1 26.2 274 11-299 1-280 (334)
84 TIGR02825 B4_12hDH leukotriene 100.0 3.2E-32 7E-37 247.9 23.0 237 17-299 11-265 (325)
85 TIGR00692 tdh L-threonine 3-de 100.0 1.6E-31 3.4E-36 244.9 26.7 265 23-299 9-283 (340)
86 cd08290 ETR 2-enoyl thioester 100.0 1.3E-31 2.8E-36 245.3 24.3 253 11-299 1-273 (341)
87 cd05188 MDR Medium chain reduc 100.0 3.1E-31 6.8E-36 234.0 25.1 249 39-300 1-255 (271)
88 cd08294 leukotriene_B4_DH_like 100.0 1.5E-31 3.3E-36 243.5 23.5 245 10-300 2-270 (329)
89 PRK10754 quinone oxidoreductas 100.0 4.4E-31 9.4E-36 240.5 21.6 237 10-282 1-243 (327)
90 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.6E-30 5.7E-35 234.7 26.4 256 11-299 1-265 (325)
91 cd08276 MDR7 Medium chain dehy 100.0 3.3E-30 7.2E-35 234.9 27.0 273 11-299 1-281 (336)
92 cd08289 MDR_yhfp_like Yhfp put 100.0 1.7E-30 3.7E-35 236.3 24.9 257 11-300 1-266 (326)
93 cd08244 MDR_enoyl_red Possible 100.0 2.7E-30 5.9E-35 234.5 25.8 253 11-299 1-263 (324)
94 cd08250 Mgc45594_like Mgc45594 100.0 3.3E-30 7.3E-35 234.7 26.1 232 10-281 1-240 (329)
95 PTZ00354 alcohol dehydrogenase 100.0 1.7E-30 3.7E-35 236.7 24.1 253 10-299 1-263 (334)
96 TIGR02823 oxido_YhdH putative 100.0 4.1E-30 8.8E-35 233.6 26.5 256 12-300 1-264 (323)
97 cd08252 AL_MDR Arginate lyase 100.0 7.4E-30 1.6E-34 233.1 25.1 254 11-299 1-267 (336)
98 cd08249 enoyl_reductase_like e 100.0 2.5E-30 5.5E-35 236.9 21.5 241 11-282 1-258 (339)
99 cd05282 ETR_like 2-enoyl thioe 100.0 1.5E-29 3.3E-34 229.5 25.2 239 24-299 13-259 (323)
100 cd08270 MDR4 Medium chain dehy 100.0 9.3E-30 2E-34 229.2 23.6 242 11-299 1-246 (305)
101 cd08248 RTN4I1 Human Reticulon 100.0 6.7E-30 1.5E-34 234.7 23.0 235 11-280 1-259 (350)
102 cd08243 quinone_oxidoreductase 100.0 2.2E-29 4.8E-34 227.8 25.4 238 11-281 1-241 (320)
103 cd05276 p53_inducible_oxidored 100.0 6.7E-29 1.5E-33 224.1 23.9 252 11-299 1-260 (323)
104 KOG1198 Zinc-binding oxidoredu 100.0 1.9E-29 4.2E-34 229.0 20.3 223 20-279 15-256 (347)
105 cd08253 zeta_crystallin Zeta-c 100.0 1.1E-28 2.4E-33 223.0 24.0 257 11-299 1-264 (325)
106 cd08288 MDR_yhdh Yhdh putative 100.0 2.7E-28 5.9E-33 221.6 25.4 257 11-300 1-265 (324)
107 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.2E-28 4.7E-33 220.9 24.6 238 22-299 4-251 (312)
108 cd05288 PGDH Prostaglandin deh 100.0 6.4E-28 1.4E-32 219.6 24.4 247 12-299 3-271 (329)
109 cd08273 MDR8 Medium chain dehy 100.0 4.5E-28 9.8E-33 220.7 22.5 232 12-282 2-237 (331)
110 cd05286 QOR2 Quinone oxidoredu 100.0 1.4E-27 3E-32 215.2 24.9 248 14-299 3-257 (320)
111 COG2130 Putative NADP-dependen 100.0 5.1E-28 1.1E-32 207.8 20.5 242 21-302 23-281 (340)
112 cd08272 MDR6 Medium chain dehy 100.0 1.5E-27 3.3E-32 216.0 24.0 253 11-299 1-259 (326)
113 cd08247 AST1_like AST1 is a cy 100.0 1.4E-27 3E-32 219.8 22.7 236 12-279 2-260 (352)
114 cd08271 MDR5 Medium chain dehy 100.0 2.7E-27 5.8E-32 214.6 23.9 236 11-281 1-242 (325)
115 cd08268 MDR2 Medium chain dehy 100.0 3.6E-27 7.9E-32 213.5 24.3 257 11-299 1-265 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 5.1E-27 1.1E-31 212.3 25.2 252 11-299 1-260 (325)
117 cd05289 MDR_like_2 alcohol deh 100.0 4.6E-27 9.9E-32 211.1 21.6 237 11-282 1-242 (309)
118 cd08251 polyketide_synthase po 100.0 2E-26 4.4E-31 206.5 22.7 214 32-281 2-222 (303)
119 cd08267 MDR1 Medium chain dehy 99.9 3E-26 6.4E-31 207.2 22.0 232 16-281 3-243 (319)
120 cd08241 QOR1 Quinone oxidoredu 99.9 7.2E-26 1.6E-30 204.5 23.4 251 11-299 1-260 (323)
121 cd08275 MDR3 Medium chain dehy 99.9 6.9E-26 1.5E-30 206.4 23.1 229 15-281 4-239 (337)
122 cd05195 enoyl_red enoyl reduct 99.9 4.6E-25 1E-29 196.0 21.7 204 38-281 1-212 (293)
123 smart00829 PKS_ER Enoylreducta 99.9 4.1E-24 8.9E-29 189.7 21.4 199 42-281 2-208 (288)
124 PF08240 ADH_N: Alcohol dehydr 99.9 7.9E-24 1.7E-28 162.0 9.2 108 37-152 1-109 (109)
125 cd08255 2-desacetyl-2-hydroxye 99.9 3.3E-22 7.1E-27 177.8 19.5 175 65-283 19-195 (277)
126 KOG1202 Animal-type fatty acid 99.9 6.1E-22 1.3E-26 193.1 12.5 243 20-308 1424-1686(2376)
127 KOG1196 Predicted NAD-dependen 99.9 1.2E-19 2.5E-24 155.9 20.8 234 33-308 33-290 (343)
128 PF00107 ADH_zinc_N: Zinc-bind 99.5 5.5E-14 1.2E-18 110.6 10.9 108 194-302 1-114 (130)
129 PRK09424 pntA NAD(P) transhydr 99.2 3.8E-10 8.2E-15 107.3 14.8 119 181-300 162-311 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 2.1E-09 4.6E-14 99.8 14.1 120 172-301 189-310 (413)
131 PRK05476 S-adenosyl-L-homocyst 98.7 5.2E-07 1.1E-11 84.2 13.8 113 169-289 196-310 (425)
132 PRK08306 dipicolinate synthase 98.6 1.7E-06 3.6E-11 77.8 16.0 111 182-299 150-260 (296)
133 TIGR00561 pntA NAD(P) transhyd 98.6 8.7E-07 1.9E-11 84.4 12.5 99 182-281 162-287 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.5 3.1E-08 6.7E-13 93.2 1.2 184 69-280 89-279 (417)
135 TIGR00518 alaDH alanine dehydr 98.5 3E-06 6.5E-11 78.5 13.1 99 183-281 166-270 (370)
136 TIGR00936 ahcY adenosylhomocys 98.4 4.5E-06 9.8E-11 77.5 12.3 103 172-282 182-286 (406)
137 PLN02494 adenosylhomocysteinas 98.4 5E-06 1.1E-10 78.0 12.1 109 172-288 241-351 (477)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.2 5.8E-06 1.2E-10 74.9 8.9 129 147-280 139-275 (311)
139 TIGR02853 spore_dpaA dipicolin 98.2 5.6E-05 1.2E-09 67.5 14.2 100 182-286 149-248 (287)
140 COG4221 Short-chain alcohol de 98.1 4.8E-05 1E-09 65.1 12.1 111 183-293 5-154 (246)
141 PRK00517 prmA ribosomal protei 98.1 1.9E-05 4E-10 69.3 10.0 131 138-282 79-217 (250)
142 PRK08324 short chain dehydroge 98.1 3.4E-05 7.4E-10 77.4 12.2 133 136-281 385-560 (681)
143 PTZ00075 Adenosylhomocysteinas 98.1 3.4E-05 7.3E-10 72.7 11.1 95 179-281 249-344 (476)
144 PRK12771 putative glutamate sy 98.1 4.9E-06 1.1E-10 81.6 5.7 79 181-259 134-234 (564)
145 PF01488 Shikimate_DH: Shikima 98.0 1.6E-05 3.4E-10 62.9 6.2 96 182-280 10-111 (135)
146 COG2518 Pcm Protein-L-isoaspar 97.8 0.00028 6E-09 59.3 10.5 96 180-277 69-168 (209)
147 PRK00045 hemA glutamyl-tRNA re 97.8 0.00017 3.7E-09 68.1 9.9 160 69-259 91-254 (423)
148 PRK11873 arsM arsenite S-adeno 97.7 0.00014 3E-09 64.6 8.7 100 180-280 74-185 (272)
149 COG0300 DltE Short-chain dehyd 97.7 0.00039 8.4E-09 60.9 11.2 114 182-295 4-159 (265)
150 PF00670 AdoHcyase_NAD: S-aden 97.7 0.00076 1.6E-08 54.5 11.8 104 177-288 16-120 (162)
151 PLN03209 translocon at the inn 97.7 0.00051 1.1E-08 66.5 12.7 104 178-281 74-210 (576)
152 COG0686 Ald Alanine dehydrogen 97.7 0.00033 7.2E-09 61.8 9.8 98 183-280 167-270 (371)
153 PF13460 NAD_binding_10: NADH( 97.7 0.00057 1.2E-08 56.5 10.7 92 187-281 1-100 (183)
154 PRK12742 oxidoreductase; Provi 97.6 0.0012 2.7E-08 56.8 12.1 99 183-281 5-134 (237)
155 KOG1205 Predicted dehydrogenas 97.6 0.00086 1.9E-08 59.3 10.6 113 182-294 10-165 (282)
156 COG1748 LYS9 Saccharopine dehy 97.5 0.0012 2.5E-08 61.1 11.5 99 185-283 2-104 (389)
157 PRK00377 cbiT cobalt-precorrin 97.5 0.0018 3.9E-08 54.6 11.9 99 180-279 37-146 (198)
158 PRK05872 short chain dehydroge 97.5 0.0026 5.6E-08 57.1 13.5 75 183-257 8-95 (296)
159 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0015 3.3E-08 56.3 11.6 99 183-281 4-138 (238)
160 KOG1209 1-Acyl dihydroxyaceton 97.5 0.001 2.2E-08 55.7 9.6 111 182-292 5-152 (289)
161 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00066 1.4E-08 56.3 8.4 109 182-299 34-147 (178)
162 PF12847 Methyltransf_18: Meth 97.5 0.00086 1.9E-08 50.7 8.4 94 183-277 1-110 (112)
163 PRK06182 short chain dehydroge 97.4 0.0027 5.8E-08 56.1 12.6 74 183-257 2-84 (273)
164 TIGR00406 prmA ribosomal prote 97.4 0.0019 4.1E-08 57.9 11.5 98 181-281 157-262 (288)
165 PRK14175 bifunctional 5,10-met 97.4 0.0018 3.8E-08 57.5 10.9 96 163-281 137-233 (286)
166 PRK08265 short chain dehydroge 97.4 0.0026 5.7E-08 55.9 12.2 99 183-281 5-139 (261)
167 PRK06139 short chain dehydroge 97.4 0.0033 7.1E-08 57.5 12.9 75 183-257 6-94 (330)
168 COG3967 DltE Short-chain dehyd 97.4 0.00087 1.9E-08 55.8 8.0 74 183-256 4-87 (245)
169 PRK06500 short chain dehydroge 97.4 0.0038 8.3E-08 54.1 12.3 75 183-257 5-90 (249)
170 PRK07109 short chain dehydroge 97.3 0.0043 9.3E-08 56.8 13.0 100 183-282 7-147 (334)
171 cd01078 NAD_bind_H4MPT_DH NADP 97.3 0.0044 9.5E-08 52.0 11.9 99 182-280 26-131 (194)
172 cd01065 NAD_bind_Shikimate_DH 97.3 0.003 6.6E-08 50.7 10.3 98 182-282 17-120 (155)
173 PRK08339 short chain dehydroge 97.3 0.0069 1.5E-07 53.3 13.2 99 183-281 7-146 (263)
174 PRK05693 short chain dehydroge 97.3 0.0068 1.5E-07 53.6 13.1 72 185-257 2-82 (274)
175 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0052 1.1E-07 50.4 11.2 97 162-281 22-119 (168)
176 PRK05993 short chain dehydroge 97.3 0.0058 1.3E-07 54.2 12.5 99 183-282 3-138 (277)
177 PF01135 PCMT: Protein-L-isoas 97.2 0.00093 2E-08 56.8 6.8 98 181-279 70-174 (209)
178 TIGR01470 cysG_Nterm siroheme 97.2 0.0062 1.3E-07 51.7 11.9 113 183-299 8-122 (205)
179 PRK07825 short chain dehydroge 97.2 0.0071 1.5E-07 53.4 12.6 74 184-257 5-88 (273)
180 PRK11705 cyclopropane fatty ac 97.2 0.0045 9.7E-08 57.7 11.6 111 164-278 148-267 (383)
181 PRK00258 aroE shikimate 5-dehy 97.2 0.0029 6.2E-08 56.4 10.0 98 182-281 121-224 (278)
182 PRK12939 short chain dehydroge 97.2 0.0099 2.2E-07 51.4 13.3 75 183-257 6-94 (250)
183 PRK08261 fabG 3-ketoacyl-(acyl 97.2 0.0062 1.3E-07 58.0 12.8 76 182-257 208-294 (450)
184 PRK06484 short chain dehydroge 97.2 0.0075 1.6E-07 58.5 13.4 101 182-282 267-404 (520)
185 COG2242 CobL Precorrin-6B meth 97.2 0.0081 1.8E-07 49.5 11.4 100 181-282 32-139 (187)
186 PRK06180 short chain dehydroge 97.1 0.011 2.4E-07 52.3 13.1 74 184-257 4-88 (277)
187 PRK12548 shikimate 5-dehydroge 97.1 0.0041 8.9E-08 55.7 10.2 99 182-280 124-238 (289)
188 PRK07576 short chain dehydroge 97.1 0.0065 1.4E-07 53.5 11.4 75 182-256 7-95 (264)
189 PRK07814 short chain dehydroge 97.1 0.01 2.2E-07 52.1 12.6 75 183-257 9-97 (263)
190 PRK07326 short chain dehydroge 97.1 0.0094 2E-07 51.2 12.1 75 183-257 5-92 (237)
191 PRK06505 enoyl-(acyl carrier p 97.1 0.012 2.7E-07 52.0 13.0 100 183-282 6-149 (271)
192 TIGR01809 Shik-DH-AROM shikima 97.1 0.0023 5E-08 57.1 8.2 76 183-258 124-201 (282)
193 COG0169 AroE Shikimate 5-dehyd 97.1 0.003 6.4E-08 56.1 8.7 116 172-293 112-239 (283)
194 PRK06196 oxidoreductase; Provi 97.1 0.012 2.6E-07 53.2 13.0 75 183-257 25-109 (315)
195 PRK07060 short chain dehydroge 97.1 0.0053 1.1E-07 53.1 10.2 75 183-257 8-87 (245)
196 PRK13943 protein-L-isoaspartat 97.1 0.0074 1.6E-07 54.8 11.3 97 180-277 77-179 (322)
197 TIGR01318 gltD_gamma_fam gluta 97.1 0.0017 3.8E-08 62.2 7.6 78 182-259 139-238 (467)
198 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.014 3E-07 49.3 12.1 91 182-280 26-116 (200)
199 PRK06484 short chain dehydroge 97.0 0.013 2.7E-07 56.9 13.3 76 182-257 3-89 (520)
200 TIGR00507 aroE shikimate 5-deh 97.0 0.0064 1.4E-07 53.9 10.3 103 174-281 107-217 (270)
201 PF01262 AlaDh_PNT_C: Alanine 97.0 0.0029 6.4E-08 51.9 7.5 97 183-280 19-141 (168)
202 PRK03369 murD UDP-N-acetylmura 97.0 0.0066 1.4E-07 58.5 11.1 73 181-258 9-81 (488)
203 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.011 2.5E-07 51.1 11.6 75 183-257 4-91 (251)
204 PRK12429 3-hydroxybutyrate deh 97.0 0.019 4.1E-07 49.9 13.0 75 183-257 3-91 (258)
205 PRK10538 malonic semialdehyde 97.0 0.021 4.5E-07 49.6 13.2 72 186-257 2-84 (248)
206 PF03435 Saccharop_dh: Sacchar 97.0 0.0071 1.5E-07 56.5 10.8 90 187-276 1-96 (386)
207 PRK07832 short chain dehydroge 97.0 0.02 4.3E-07 50.6 13.2 72 186-257 2-88 (272)
208 PRK07806 short chain dehydroge 97.0 0.009 2E-07 51.8 10.8 98 183-280 5-136 (248)
209 PRK08415 enoyl-(acyl carrier p 97.0 0.017 3.8E-07 51.2 12.7 100 183-282 4-147 (274)
210 PRK13940 glutamyl-tRNA reducta 97.0 0.0094 2E-07 56.1 11.3 96 182-281 179-276 (414)
211 PRK07062 short chain dehydroge 97.0 0.018 3.8E-07 50.6 12.6 75 183-257 7-97 (265)
212 PRK07063 short chain dehydroge 97.0 0.012 2.6E-07 51.4 11.5 75 183-257 6-96 (260)
213 PF13602 ADH_zinc_N_2: Zinc-bi 97.0 0.00022 4.7E-09 55.4 0.3 50 227-279 1-52 (127)
214 PRK14027 quinate/shikimate deh 97.0 0.0091 2E-07 53.3 10.7 74 182-256 125-203 (283)
215 PRK08263 short chain dehydroge 97.0 0.02 4.4E-07 50.6 13.0 74 184-257 3-87 (275)
216 PRK08267 short chain dehydroge 96.9 0.019 4.1E-07 50.2 12.7 73 185-257 2-87 (260)
217 PRK06057 short chain dehydroge 96.9 0.0083 1.8E-07 52.4 10.3 75 183-257 6-89 (255)
218 PRK07523 gluconate 5-dehydroge 96.9 0.016 3.4E-07 50.6 12.0 75 183-257 9-97 (255)
219 PRK12828 short chain dehydroge 96.9 0.012 2.7E-07 50.3 11.2 75 183-257 6-92 (239)
220 PRK09291 short chain dehydroge 96.9 0.014 3.1E-07 50.8 11.6 73 184-256 2-82 (257)
221 PRK13942 protein-L-isoaspartat 96.9 0.0086 1.9E-07 51.1 9.9 97 180-277 73-175 (212)
222 PRK12549 shikimate 5-dehydroge 96.9 0.0048 1E-07 55.1 8.4 96 182-280 125-229 (284)
223 PRK09242 tropinone reductase; 96.9 0.027 5.8E-07 49.1 13.0 75 183-257 8-98 (257)
224 PRK13394 3-hydroxybutyrate deh 96.9 0.026 5.7E-07 49.2 13.0 75 183-257 6-94 (262)
225 PRK09186 flagellin modificatio 96.9 0.015 3.2E-07 50.7 11.3 74 183-256 3-92 (256)
226 PRK12829 short chain dehydroge 96.9 0.0081 1.8E-07 52.5 9.7 77 182-258 9-97 (264)
227 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.0086 1.9E-07 52.5 9.8 75 183-257 5-90 (263)
228 PLN00203 glutamyl-tRNA reducta 96.9 0.011 2.3E-07 57.2 11.1 98 183-281 265-372 (519)
229 PRK12749 quinate/shikimate deh 96.9 0.012 2.7E-07 52.5 10.8 98 182-279 122-234 (288)
230 PRK14192 bifunctional 5,10-met 96.9 0.013 2.9E-07 52.1 10.8 94 165-281 140-234 (283)
231 TIGR02469 CbiT precorrin-6Y C5 96.9 0.022 4.7E-07 43.5 10.9 97 181-278 17-122 (124)
232 cd05311 NAD_bind_2_malic_enz N 96.9 0.017 3.8E-07 49.7 11.3 106 169-279 10-129 (226)
233 CHL00194 ycf39 Ycf39; Provisio 96.9 0.018 3.8E-07 52.3 11.9 94 186-280 2-111 (317)
234 PRK05876 short chain dehydroge 96.8 0.025 5.5E-07 50.1 12.4 75 183-257 5-93 (275)
235 PRK08594 enoyl-(acyl carrier p 96.8 0.033 7.1E-07 48.9 12.9 100 183-282 6-151 (257)
236 PRK06128 oxidoreductase; Provi 96.8 0.032 7E-07 50.1 13.1 99 183-281 54-194 (300)
237 PF02353 CMAS: Mycolic acid cy 96.8 0.002 4.3E-08 57.2 5.0 97 177-277 56-165 (273)
238 PRK07533 enoyl-(acyl carrier p 96.8 0.041 8.9E-07 48.2 13.4 99 183-281 9-151 (258)
239 PRK06603 enoyl-(acyl carrier p 96.8 0.029 6.3E-07 49.2 12.4 75 183-257 7-96 (260)
240 COG0373 HemA Glutamyl-tRNA red 96.8 0.026 5.6E-07 52.6 12.4 96 182-281 176-277 (414)
241 PRK06718 precorrin-2 dehydroge 96.8 0.014 2.9E-07 49.5 9.7 113 182-299 8-122 (202)
242 PRK08618 ornithine cyclodeamin 96.8 0.012 2.7E-07 53.6 10.2 101 182-288 125-232 (325)
243 PRK13944 protein-L-isoaspartat 96.7 0.02 4.4E-07 48.5 10.7 96 180-277 69-172 (205)
244 PRK06079 enoyl-(acyl carrier p 96.7 0.039 8.6E-07 48.1 12.8 99 183-282 6-147 (252)
245 PRK12481 2-deoxy-D-gluconate 3 96.7 0.03 6.5E-07 48.8 12.0 75 183-257 7-93 (251)
246 COG2264 PrmA Ribosomal protein 96.7 0.016 3.4E-07 51.7 10.0 131 146-282 129-267 (300)
247 PF13241 NAD_binding_7: Putati 96.7 0.0024 5.2E-08 47.9 4.3 93 183-285 6-98 (103)
248 PRK06197 short chain dehydroge 96.7 0.03 6.6E-07 50.3 12.3 75 182-256 14-104 (306)
249 PRK08085 gluconate 5-dehydroge 96.7 0.041 8.8E-07 47.9 12.7 75 183-257 8-96 (254)
250 PRK09072 short chain dehydroge 96.7 0.035 7.6E-07 48.6 12.4 75 183-257 4-90 (263)
251 PRK12936 3-ketoacyl-(acyl-carr 96.6 0.047 1E-06 47.0 12.7 75 183-257 5-90 (245)
252 COG2230 Cfa Cyclopropane fatty 96.6 0.0056 1.2E-07 54.1 6.7 109 169-281 58-179 (283)
253 PRK05866 short chain dehydroge 96.6 0.012 2.6E-07 52.8 9.0 75 183-257 39-127 (293)
254 PRK08159 enoyl-(acyl carrier p 96.6 0.038 8.2E-07 48.9 12.2 100 182-281 8-151 (272)
255 PRK12367 short chain dehydroge 96.6 0.014 3.1E-07 50.9 9.3 74 183-257 13-89 (245)
256 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.018 3.9E-07 50.5 9.9 74 183-256 4-88 (262)
257 PRK07574 formate dehydrogenase 96.6 0.019 4.1E-07 53.5 10.2 90 183-279 191-285 (385)
258 TIGR00080 pimt protein-L-isoas 96.6 0.02 4.3E-07 48.9 9.8 97 180-277 74-176 (215)
259 PF10727 Rossmann-like: Rossma 96.6 0.0076 1.7E-07 46.9 6.5 86 185-277 11-102 (127)
260 PRK14194 bifunctional 5,10-met 96.6 0.019 4.2E-07 51.3 9.8 95 163-280 138-233 (301)
261 PRK06719 precorrin-2 dehydroge 96.6 0.013 2.9E-07 47.5 8.1 111 182-299 11-122 (157)
262 PRK10792 bifunctional 5,10-met 96.6 0.027 5.9E-07 50.0 10.6 95 163-280 138-233 (285)
263 PLN00141 Tic62-NAD(P)-related 96.6 0.044 9.5E-07 47.8 12.0 98 183-280 16-133 (251)
264 PRK06463 fabG 3-ketoacyl-(acyl 96.6 0.059 1.3E-06 46.9 12.8 75 183-257 6-89 (255)
265 TIGR03840 TMPT_Se_Te thiopurin 96.5 0.02 4.4E-07 48.9 9.4 96 182-279 33-153 (213)
266 PRK05717 oxidoreductase; Valid 96.5 0.022 4.8E-07 49.6 10.0 76 182-257 8-94 (255)
267 PF03807 F420_oxidored: NADP o 96.5 0.06 1.3E-06 39.4 10.8 86 186-277 1-93 (96)
268 PRK15469 ghrA bifunctional gly 96.5 0.025 5.5E-07 51.2 10.4 90 182-280 134-228 (312)
269 PRK06101 short chain dehydroge 96.5 0.051 1.1E-06 46.9 12.1 72 185-256 2-80 (240)
270 PRK06940 short chain dehydroge 96.5 0.046 1E-06 48.4 12.0 95 185-280 3-127 (275)
271 PRK06181 short chain dehydroge 96.5 0.034 7.4E-07 48.6 10.9 74 184-257 1-88 (263)
272 PRK14191 bifunctional 5,10-met 96.5 0.035 7.6E-07 49.3 10.8 96 162-280 135-231 (285)
273 PRK12550 shikimate 5-dehydroge 96.5 0.021 4.5E-07 50.7 9.4 100 172-280 111-218 (272)
274 PRK07424 bifunctional sterol d 96.5 0.027 5.9E-07 52.8 10.6 75 183-257 177-255 (406)
275 PRK05854 short chain dehydroge 96.5 0.021 4.5E-07 51.7 9.6 75 183-257 13-103 (313)
276 PRK07831 short chain dehydroge 96.5 0.035 7.7E-07 48.6 10.8 77 181-257 14-107 (262)
277 PLN03139 formate dehydrogenase 96.5 0.024 5.2E-07 52.8 10.0 91 182-279 197-292 (386)
278 PRK06949 short chain dehydroge 96.5 0.02 4.4E-07 49.8 9.2 76 182-257 7-96 (258)
279 PRK12809 putative oxidoreducta 96.5 0.0092 2E-07 59.5 7.7 76 183-258 309-406 (639)
280 PRK05867 short chain dehydroge 96.4 0.021 4.5E-07 49.8 9.1 75 183-257 8-96 (253)
281 PRK00107 gidB 16S rRNA methylt 96.4 0.044 9.6E-07 45.8 10.6 97 181-279 43-146 (187)
282 TIGR02356 adenyl_thiF thiazole 96.4 0.019 4E-07 48.7 8.3 96 183-278 20-143 (202)
283 PRK12747 short chain dehydroge 96.4 0.059 1.3E-06 46.8 11.8 100 183-282 3-148 (252)
284 PRK06194 hypothetical protein; 96.4 0.029 6.2E-07 49.8 10.0 75 183-257 5-93 (287)
285 PRK07985 oxidoreductase; Provi 96.4 0.071 1.5E-06 47.8 12.5 100 182-281 47-188 (294)
286 PRK07370 enoyl-(acyl carrier p 96.4 0.067 1.5E-06 46.9 12.1 100 183-282 5-151 (258)
287 PRK05565 fabG 3-ketoacyl-(acyl 96.4 0.052 1.1E-06 46.7 11.3 74 184-257 5-93 (247)
288 PLN02928 oxidoreductase family 96.4 0.031 6.8E-07 51.4 10.3 97 182-280 157-264 (347)
289 PRK06701 short chain dehydroge 96.4 0.079 1.7E-06 47.4 12.7 100 182-281 44-184 (290)
290 PRK14189 bifunctional 5,10-met 96.4 0.032 6.8E-07 49.6 9.8 96 163-281 137-233 (285)
291 PLN02253 xanthoxin dehydrogena 96.4 0.031 6.8E-07 49.4 10.0 75 183-257 17-104 (280)
292 COG2910 Putative NADH-flavin r 96.4 0.034 7.3E-07 45.7 9.1 91 186-280 2-106 (211)
293 PRK07502 cyclohexadienyl dehyd 96.4 0.038 8.2E-07 49.9 10.6 92 185-281 7-103 (307)
294 PRK07984 enoyl-(acyl carrier p 96.4 0.095 2.1E-06 46.1 12.9 74 183-256 5-93 (262)
295 PRK07791 short chain dehydroge 96.4 0.074 1.6E-06 47.4 12.4 76 182-257 4-102 (286)
296 cd05212 NAD_bind_m-THF_DH_Cycl 96.4 0.071 1.5E-06 42.3 10.8 96 163-281 7-103 (140)
297 PRK07478 short chain dehydroge 96.4 0.033 7.1E-07 48.5 9.9 75 183-257 5-93 (254)
298 PF02670 DXP_reductoisom: 1-de 96.3 0.12 2.6E-06 40.3 11.7 90 187-276 1-119 (129)
299 PRK06124 gluconate 5-dehydroge 96.3 0.1 2.2E-06 45.4 13.0 76 182-257 9-98 (256)
300 PRK05884 short chain dehydroge 96.3 0.031 6.6E-07 47.9 9.4 71 186-256 2-78 (223)
301 PRK07453 protochlorophyllide o 96.3 0.023 4.9E-07 51.6 9.1 74 183-256 5-92 (322)
302 PRK07890 short chain dehydroge 96.3 0.027 5.8E-07 49.1 9.2 76 182-257 3-92 (258)
303 KOG1201 Hydroxysteroid 17-beta 96.3 0.026 5.7E-07 49.9 8.9 76 182-257 36-124 (300)
304 PRK13243 glyoxylate reductase; 96.3 0.035 7.5E-07 50.8 10.2 107 183-299 149-260 (333)
305 PRK13255 thiopurine S-methyltr 96.3 0.027 5.9E-07 48.2 8.9 94 181-276 35-153 (218)
306 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.036 7.9E-07 47.9 10.0 75 183-257 4-92 (253)
307 PRK06914 short chain dehydroge 96.3 0.077 1.7E-06 46.9 12.2 74 184-257 3-91 (280)
308 PRK07340 ornithine cyclodeamin 96.3 0.026 5.6E-07 51.0 9.2 102 182-289 123-229 (304)
309 PRK05562 precorrin-2 dehydroge 96.3 0.099 2.2E-06 44.8 12.2 114 182-299 23-138 (223)
310 PRK08219 short chain dehydroge 96.3 0.092 2E-06 44.6 12.3 72 185-257 4-81 (227)
311 PRK07067 sorbitol dehydrogenas 96.3 0.038 8.2E-07 48.2 9.9 75 183-257 5-90 (257)
312 PRK07069 short chain dehydroge 96.3 0.067 1.4E-06 46.3 11.4 95 187-281 2-140 (251)
313 PRK05653 fabG 3-ketoacyl-(acyl 96.3 0.055 1.2E-06 46.4 10.8 75 183-257 4-92 (246)
314 PRK12475 thiamine/molybdopteri 96.3 0.024 5.1E-07 52.0 8.8 76 184-259 24-128 (338)
315 PRK04457 spermidine synthase; 96.3 0.085 1.8E-06 46.6 12.0 95 182-277 65-176 (262)
316 PRK08063 enoyl-(acyl carrier p 96.3 0.096 2.1E-06 45.3 12.3 75 183-257 3-92 (250)
317 PRK12937 short chain dehydroge 96.3 0.14 3.1E-06 44.0 13.3 99 182-280 3-141 (245)
318 PRK05650 short chain dehydroge 96.3 0.078 1.7E-06 46.6 11.9 72 186-257 2-87 (270)
319 TIGR02992 ectoine_eutC ectoine 96.3 0.028 6E-07 51.3 9.1 102 182-288 127-235 (326)
320 KOG1210 Predicted 3-ketosphing 96.2 0.039 8.4E-07 49.1 9.5 100 182-281 31-174 (331)
321 TIGR01963 PHB_DH 3-hydroxybuty 96.2 0.089 1.9E-06 45.6 12.0 73 185-257 2-88 (255)
322 PF00106 adh_short: short chai 96.2 0.067 1.4E-06 43.1 10.5 73 185-257 1-90 (167)
323 COG1648 CysG Siroheme synthase 96.2 0.06 1.3E-06 45.8 10.3 114 182-299 10-125 (210)
324 PRK07024 short chain dehydroge 96.2 0.038 8.2E-07 48.3 9.6 74 184-257 2-88 (257)
325 PRK13656 trans-2-enoyl-CoA red 96.2 0.088 1.9E-06 48.8 11.9 76 182-258 39-142 (398)
326 PF02882 THF_DHG_CYH_C: Tetrah 96.2 0.038 8.2E-07 44.8 8.5 96 162-280 14-110 (160)
327 COG1052 LdhA Lactate dehydroge 96.2 0.046 1E-06 49.7 10.0 108 182-299 144-256 (324)
328 PF05368 NmrA: NmrA-like famil 96.2 0.066 1.4E-06 46.0 10.8 71 187-257 1-74 (233)
329 PRK14188 bifunctional 5,10-met 96.2 0.043 9.4E-07 49.1 9.6 95 163-281 137-233 (296)
330 smart00846 Gp_dh_N Glyceraldeh 96.2 0.089 1.9E-06 42.2 10.6 98 186-283 2-123 (149)
331 PRK05855 short chain dehydroge 96.1 0.067 1.5E-06 52.3 11.9 76 182-257 313-402 (582)
332 PRK14982 acyl-ACP reductase; P 96.1 0.048 1E-06 49.8 9.9 94 182-281 153-249 (340)
333 PLN02657 3,8-divinyl protochlo 96.1 0.088 1.9E-06 49.3 12.1 100 181-280 57-183 (390)
334 KOG1014 17 beta-hydroxysteroid 96.1 0.037 8E-07 49.2 8.8 117 182-298 47-206 (312)
335 TIGR02622 CDP_4_6_dhtase CDP-g 96.1 0.068 1.5E-06 49.1 11.1 75 183-257 3-85 (349)
336 PRK06483 dihydromonapterin red 96.1 0.047 1E-06 46.9 9.5 74 184-257 2-84 (236)
337 PRK12823 benD 1,6-dihydroxycyc 96.1 0.11 2.4E-06 45.3 11.9 73 183-256 7-93 (260)
338 PRK07677 short chain dehydroge 96.1 0.05 1.1E-06 47.3 9.6 74 184-257 1-88 (252)
339 PRK07666 fabG 3-ketoacyl-(acyl 96.1 0.038 8.2E-07 47.6 8.8 75 183-257 6-94 (239)
340 PRK08589 short chain dehydroge 96.1 0.048 1E-06 48.2 9.6 74 183-257 5-92 (272)
341 PRK06125 short chain dehydroge 96.1 0.044 9.6E-07 47.9 9.2 75 183-257 6-91 (259)
342 PRK12938 acetyacetyl-CoA reduc 96.0 0.16 3.4E-06 43.9 12.5 74 184-257 3-91 (246)
343 PRK12480 D-lactate dehydrogena 96.0 0.061 1.3E-06 49.1 10.2 105 183-299 145-254 (330)
344 PRK12743 oxidoreductase; Provi 96.0 0.16 3.5E-06 44.2 12.7 74 184-257 2-90 (256)
345 PRK01438 murD UDP-N-acetylmura 96.0 0.074 1.6E-06 51.2 11.3 72 182-258 14-89 (480)
346 PRK05875 short chain dehydroge 96.0 0.057 1.2E-06 47.6 9.9 75 183-257 6-96 (276)
347 PRK07774 short chain dehydroge 96.0 0.052 1.1E-06 47.0 9.5 75 183-257 5-93 (250)
348 PRK06138 short chain dehydroge 96.0 0.056 1.2E-06 46.8 9.7 75 183-257 4-91 (252)
349 PRK12746 short chain dehydroge 96.0 0.086 1.9E-06 45.8 10.8 75 183-257 5-100 (254)
350 PRK05557 fabG 3-ketoacyl-(acyl 96.0 0.16 3.4E-06 43.6 12.4 75 183-257 4-93 (248)
351 PRK14178 bifunctional 5,10-met 96.0 0.078 1.7E-06 46.9 10.4 95 163-280 131-226 (279)
352 PRK06436 glycerate dehydrogena 96.0 0.05 1.1E-06 49.0 9.3 86 182-279 120-210 (303)
353 TIGR02632 RhaD_aldol-ADH rhamn 96.0 0.036 7.8E-07 55.7 9.3 107 138-257 379-503 (676)
354 PRK06398 aldose dehydrogenase; 96.0 0.077 1.7E-06 46.4 10.4 69 183-257 5-82 (258)
355 PF03446 NAD_binding_2: NAD bi 96.0 0.04 8.6E-07 44.9 8.0 87 186-279 3-95 (163)
356 PRK07402 precorrin-6B methylas 96.0 0.19 4.2E-06 42.1 12.5 100 180-280 37-144 (196)
357 PRK08340 glucose-1-dehydrogena 96.0 0.057 1.2E-06 47.2 9.6 72 186-257 2-86 (259)
358 PRK06179 short chain dehydroge 96.0 0.074 1.6E-06 46.7 10.3 71 184-257 4-83 (270)
359 PRK06077 fabG 3-ketoacyl-(acyl 96.0 0.18 4E-06 43.5 12.7 99 184-282 6-144 (252)
360 PF01118 Semialdhyde_dh: Semia 96.0 0.024 5.1E-07 43.7 6.3 91 186-280 1-99 (121)
361 PRK08277 D-mannonate oxidoredu 96.0 0.064 1.4E-06 47.4 9.9 74 183-256 9-96 (278)
362 PRK08643 acetoin reductase; Va 96.0 0.049 1.1E-06 47.4 9.1 74 184-257 2-89 (256)
363 TIGR01532 E4PD_g-proteo D-eryt 96.0 0.058 1.2E-06 49.1 9.6 95 186-281 1-123 (325)
364 PRK05447 1-deoxy-D-xylulose 5- 96.0 0.12 2.6E-06 47.9 11.6 92 185-276 2-120 (385)
365 PRK14967 putative methyltransf 96.0 0.16 3.4E-06 43.6 11.9 95 181-279 34-160 (223)
366 TIGR03589 PseB UDP-N-acetylglu 95.9 0.066 1.4E-06 48.7 10.0 98 183-280 3-126 (324)
367 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.051 1.1E-06 46.9 9.0 75 183-257 5-93 (251)
368 PRK08862 short chain dehydroge 95.9 0.069 1.5E-06 45.9 9.6 74 183-256 4-92 (227)
369 PRK15181 Vi polysaccharide bio 95.9 0.058 1.3E-06 49.6 9.7 86 170-256 2-99 (348)
370 PRK06172 short chain dehydroge 95.9 0.073 1.6E-06 46.2 9.9 75 183-257 6-94 (253)
371 PRK07035 short chain dehydroge 95.9 0.077 1.7E-06 46.0 9.9 75 183-257 7-95 (252)
372 PRK07856 short chain dehydroge 95.9 0.16 3.5E-06 44.0 12.0 70 183-257 5-85 (252)
373 KOG4169 15-hydroxyprostaglandi 95.9 0.11 2.5E-06 44.2 10.2 120 184-304 5-163 (261)
374 PRK06720 hypothetical protein; 95.9 0.1 2.2E-06 42.8 9.9 75 183-257 15-103 (169)
375 PLN02214 cinnamoyl-CoA reducta 95.9 0.12 2.7E-06 47.3 11.6 98 182-279 8-127 (342)
376 PRK08213 gluconate 5-dehydroge 95.9 0.08 1.7E-06 46.2 9.9 75 183-257 11-99 (259)
377 PRK15409 bifunctional glyoxyla 95.9 0.094 2E-06 47.8 10.5 89 182-279 143-237 (323)
378 PRK07074 short chain dehydroge 95.9 0.065 1.4E-06 46.7 9.3 74 184-257 2-87 (257)
379 PRK08317 hypothetical protein; 95.8 0.064 1.4E-06 46.0 9.2 100 179-279 15-125 (241)
380 PLN02695 GDP-D-mannose-3',5'-e 95.8 0.069 1.5E-06 49.6 9.9 74 182-256 19-94 (370)
381 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.087 1.9E-06 45.5 10.1 75 183-257 4-90 (248)
382 PRK14179 bifunctional 5,10-met 95.8 0.075 1.6E-06 47.2 9.5 96 163-281 137-233 (284)
383 PRK06482 short chain dehydroge 95.8 0.083 1.8E-06 46.6 10.0 73 185-257 3-86 (276)
384 PF01408 GFO_IDH_MocA: Oxidore 95.8 0.2 4.3E-06 38.1 10.9 90 186-280 2-94 (120)
385 PF07991 IlvN: Acetohydroxy ac 95.8 0.06 1.3E-06 43.5 8.0 90 183-279 3-96 (165)
386 PRK07904 short chain dehydroge 95.8 0.057 1.2E-06 47.2 8.8 77 181-257 5-97 (253)
387 PRK07097 gluconate 5-dehydroge 95.8 0.083 1.8E-06 46.3 9.8 75 183-257 9-97 (265)
388 cd05211 NAD_bind_Glu_Leu_Phe_V 95.8 0.13 2.9E-06 43.9 10.7 37 182-218 21-57 (217)
389 COG0569 TrkA K+ transport syst 95.8 0.093 2E-06 45.2 9.8 74 186-259 2-78 (225)
390 PLN02780 ketoreductase/ oxidor 95.8 0.052 1.1E-06 49.4 8.7 45 182-226 51-96 (320)
391 PRK08177 short chain dehydroge 95.8 0.062 1.3E-06 45.9 8.7 72 185-257 2-81 (225)
392 PLN03075 nicotianamine synthas 95.8 0.084 1.8E-06 47.2 9.6 104 174-278 115-233 (296)
393 PRK14176 bifunctional 5,10-met 95.8 0.1 2.2E-06 46.3 10.1 95 163-280 143-238 (287)
394 PRK00141 murD UDP-N-acetylmura 95.8 0.11 2.3E-06 50.0 11.1 72 182-257 13-84 (473)
395 PRK08220 2,3-dihydroxybenzoate 95.8 0.22 4.7E-06 43.1 12.2 69 183-257 7-86 (252)
396 TIGR01829 AcAcCoA_reduct aceto 95.8 0.18 3.8E-06 43.3 11.6 73 185-257 1-88 (242)
397 PRK07577 short chain dehydroge 95.8 0.12 2.7E-06 44.1 10.5 68 184-257 3-78 (234)
398 PRK08936 glucose-1-dehydrogena 95.7 0.21 4.5E-06 43.7 12.1 76 182-257 5-95 (261)
399 PRK06841 short chain dehydroge 95.7 0.099 2.2E-06 45.4 10.0 74 183-257 14-99 (255)
400 COG2226 UbiE Methylase involve 95.7 0.1 2.3E-06 45.1 9.7 100 181-281 49-159 (238)
401 PRK08644 thiamine biosynthesis 95.7 0.071 1.5E-06 45.5 8.6 34 183-216 27-61 (212)
402 PRK00811 spermidine synthase; 95.7 0.16 3.4E-06 45.4 11.2 96 182-278 75-191 (283)
403 TIGR00438 rrmJ cell division p 95.7 0.13 2.9E-06 42.7 10.2 97 178-280 27-148 (188)
404 PLN02896 cinnamyl-alcohol dehy 95.7 0.095 2.1E-06 48.2 10.2 76 182-257 8-89 (353)
405 PRK12769 putative oxidoreducta 95.7 0.041 8.9E-07 55.1 8.2 77 182-258 325-423 (654)
406 PLN02233 ubiquinone biosynthes 95.7 0.089 1.9E-06 46.4 9.5 100 180-280 70-184 (261)
407 PRK14618 NAD(P)H-dependent gly 95.7 0.073 1.6E-06 48.5 9.2 91 185-279 5-105 (328)
408 PF06325 PrmA: Ribosomal prote 95.7 0.013 2.8E-07 52.4 4.2 134 138-282 120-263 (295)
409 PRK07688 thiamine/molybdopteri 95.7 0.062 1.3E-06 49.3 8.7 76 184-259 24-128 (339)
410 PRK14172 bifunctional 5,10-met 95.7 0.12 2.5E-06 45.8 10.0 96 163-281 137-233 (278)
411 cd01487 E1_ThiF_like E1_ThiF_l 95.7 0.087 1.9E-06 43.4 8.8 92 186-277 1-119 (174)
412 PLN02989 cinnamyl-alcohol dehy 95.6 0.061 1.3E-06 48.7 8.5 75 183-257 4-87 (325)
413 PRK06935 2-deoxy-D-gluconate 3 95.6 0.12 2.6E-06 45.0 10.1 75 182-257 13-101 (258)
414 PF00899 ThiF: ThiF family; I 95.6 0.16 3.5E-06 39.8 9.8 94 184-277 2-122 (135)
415 PRK07454 short chain dehydroge 95.6 0.079 1.7E-06 45.6 8.8 75 183-257 5-93 (241)
416 PRK08762 molybdopterin biosynt 95.6 0.086 1.9E-06 49.1 9.5 77 183-259 134-237 (376)
417 PRK08017 oxidoreductase; Provi 95.6 0.11 2.4E-06 45.1 9.7 72 185-257 3-84 (256)
418 PRK06198 short chain dehydroge 95.6 0.081 1.8E-06 46.1 8.9 76 182-257 4-94 (260)
419 PF01210 NAD_Gly3P_dh_N: NAD-d 95.6 0.063 1.4E-06 43.4 7.6 88 186-277 1-101 (157)
420 PRK05479 ketol-acid reductoiso 95.6 0.11 2.4E-06 47.2 9.8 88 182-277 15-107 (330)
421 PLN02366 spermidine synthase 95.6 0.15 3.2E-06 46.1 10.6 95 182-278 90-206 (308)
422 PLN02986 cinnamyl-alcohol dehy 95.6 0.078 1.7E-06 48.0 9.0 74 183-256 4-86 (322)
423 PLN02520 bifunctional 3-dehydr 95.6 0.075 1.6E-06 51.8 9.3 96 183-281 378-478 (529)
424 PRK06932 glycerate dehydrogena 95.6 0.077 1.7E-06 48.1 8.8 84 183-279 146-234 (314)
425 PRK13403 ketol-acid reductoiso 95.6 0.13 2.9E-06 46.4 10.1 90 182-279 14-107 (335)
426 TIGR00417 speE spermidine synt 95.5 0.2 4.4E-06 44.3 11.3 97 182-279 71-187 (270)
427 KOG1199 Short-chain alcohol de 95.5 0.073 1.6E-06 43.3 7.5 76 183-258 8-94 (260)
428 PRK08410 2-hydroxyacid dehydro 95.5 0.13 2.9E-06 46.5 10.3 35 182-216 143-177 (311)
429 PRK15116 sulfur acceptor prote 95.5 0.12 2.6E-06 45.6 9.6 98 183-280 29-155 (268)
430 PRK00312 pcm protein-L-isoaspa 95.5 0.09 2E-06 44.7 8.7 99 179-279 74-176 (212)
431 PRK14190 bifunctional 5,10-met 95.5 0.17 3.7E-06 45.0 10.5 96 163-281 137-233 (284)
432 PRK08655 prephenate dehydrogen 95.5 0.12 2.5E-06 49.2 10.1 89 186-280 2-94 (437)
433 TIGR02354 thiF_fam2 thiamine b 95.5 0.095 2.1E-06 44.3 8.5 33 184-216 21-54 (200)
434 PRK14106 murD UDP-N-acetylmura 95.5 0.11 2.4E-06 49.5 10.1 72 183-258 4-79 (450)
435 PRK08703 short chain dehydroge 95.5 0.12 2.7E-06 44.4 9.6 44 183-226 5-49 (239)
436 PRK14177 bifunctional 5,10-met 95.5 0.14 3.1E-06 45.4 9.9 95 163-280 138-233 (284)
437 PRK08261 fabG 3-ketoacyl-(acyl 95.5 0.016 3.4E-07 55.3 4.3 94 178-282 28-127 (450)
438 PRK08251 short chain dehydroge 95.5 0.13 2.9E-06 44.4 9.8 73 184-256 2-90 (248)
439 COG0111 SerA Phosphoglycerate 95.5 0.12 2.5E-06 47.1 9.6 33 183-215 141-173 (324)
440 PRK13581 D-3-phosphoglycerate 95.4 0.18 3.9E-06 49.1 11.5 89 183-280 139-232 (526)
441 PTZ00098 phosphoethanolamine N 95.4 0.1 2.2E-06 46.1 8.9 104 174-279 44-157 (263)
442 PRK11036 putative S-adenosyl-L 95.4 0.14 3E-06 44.9 9.8 94 182-277 43-148 (255)
443 PRK08291 ectoine utilization p 95.4 0.11 2.4E-06 47.5 9.4 102 182-288 130-238 (330)
444 PRK08628 short chain dehydroge 95.4 0.11 2.5E-06 45.1 9.2 74 183-257 6-93 (258)
445 TIGR02355 moeB molybdopterin s 95.4 0.077 1.7E-06 46.2 7.9 77 184-260 24-127 (240)
446 KOG0725 Reductases with broad 95.4 0.12 2.6E-06 45.9 9.2 77 182-258 6-100 (270)
447 PRK06487 glycerate dehydrogena 95.4 0.11 2.5E-06 47.1 9.3 35 182-216 146-180 (317)
448 PRK07102 short chain dehydroge 95.4 0.13 2.8E-06 44.3 9.4 73 185-257 2-86 (243)
449 PLN02244 tocopherol O-methyltr 95.4 0.11 2.3E-06 47.8 9.1 96 182-278 117-223 (340)
450 TIGR01327 PGDH D-3-phosphoglyc 95.4 0.17 3.6E-06 49.4 10.9 91 182-280 136-231 (525)
451 PRK14180 bifunctional 5,10-met 95.4 0.17 3.6E-06 45.0 9.9 97 162-281 136-233 (282)
452 PRK06141 ornithine cyclodeamin 95.3 0.35 7.6E-06 43.8 12.3 103 182-288 123-230 (314)
453 PLN02819 lysine-ketoglutarate 95.3 0.2 4.3E-06 52.3 11.8 76 183-258 568-659 (1042)
454 PRK11207 tellurite resistance 95.3 0.13 2.9E-06 43.2 9.0 94 181-277 28-133 (197)
455 PRK09310 aroDE bifunctional 3- 95.3 0.13 2.8E-06 49.5 9.9 73 182-259 330-402 (477)
456 PLN02730 enoyl-[acyl-carrier-p 95.3 0.3 6.4E-06 44.1 11.7 37 182-219 7-46 (303)
457 PRK04207 glyceraldehyde-3-phos 95.3 0.27 5.8E-06 45.2 11.5 91 186-279 3-110 (341)
458 PRK08309 short chain dehydroge 95.3 0.57 1.2E-05 38.7 12.5 96 186-282 2-116 (177)
459 PRK06113 7-alpha-hydroxysteroi 95.3 0.17 3.6E-06 44.1 9.8 75 183-257 10-98 (255)
460 PRK07889 enoyl-(acyl carrier p 95.3 0.12 2.6E-06 45.2 8.9 75 183-257 6-95 (256)
461 cd05291 HicDH_like L-2-hydroxy 95.3 0.29 6.3E-06 44.2 11.6 91 186-280 2-119 (306)
462 PRK07775 short chain dehydroge 95.3 0.18 3.9E-06 44.5 10.1 74 184-257 10-97 (274)
463 cd01483 E1_enzyme_family Super 95.3 0.15 3.2E-06 40.4 8.6 94 186-279 1-122 (143)
464 PRK08328 hypothetical protein; 95.3 0.14 2.9E-06 44.4 9.0 32 184-215 27-59 (231)
465 PRK08945 putative oxoacyl-(acy 95.2 0.13 2.9E-06 44.4 9.0 77 181-257 9-102 (247)
466 PRK08303 short chain dehydroge 95.2 0.17 3.6E-06 45.7 9.9 74 183-256 7-105 (305)
467 PRK05690 molybdopterin biosynt 95.2 0.17 3.6E-06 44.2 9.6 78 183-260 31-135 (245)
468 PRK01581 speE spermidine synth 95.2 0.31 6.8E-06 44.8 11.5 96 182-279 149-269 (374)
469 PRK07066 3-hydroxybutyryl-CoA 95.2 0.31 6.8E-06 44.3 11.5 85 185-272 8-113 (321)
470 PRK08264 short chain dehydroge 95.2 0.13 2.9E-06 44.1 8.9 71 183-257 5-83 (238)
471 TIGR03206 benzo_BadH 2-hydroxy 95.2 0.18 4E-06 43.5 9.8 74 183-256 2-89 (250)
472 KOG1502 Flavonol reductase/cin 95.2 0.13 2.7E-06 46.5 8.8 74 183-256 5-87 (327)
473 PRK04148 hypothetical protein; 95.2 0.5 1.1E-05 37.0 11.0 97 182-282 15-113 (134)
474 PRK13302 putative L-aspartate 95.2 0.2 4.4E-06 44.4 10.0 87 185-276 7-96 (271)
475 PRK06114 short chain dehydroge 95.2 0.21 4.5E-06 43.5 10.1 75 183-257 7-96 (254)
476 PRK12859 3-ketoacyl-(acyl-carr 95.2 0.55 1.2E-05 40.9 12.8 33 182-214 4-39 (256)
477 PRK09135 pteridine reductase; 95.1 0.15 3.3E-06 43.8 9.1 74 183-256 5-94 (249)
478 PRK02472 murD UDP-N-acetylmura 95.1 0.17 3.6E-06 48.2 10.1 73 183-258 4-79 (447)
479 PRK14169 bifunctional 5,10-met 95.1 0.22 4.7E-06 44.2 9.9 96 163-281 135-231 (282)
480 TIGR01289 LPOR light-dependent 95.1 0.15 3.2E-06 46.2 9.3 74 184-257 3-91 (314)
481 PRK08416 7-alpha-hydroxysteroi 95.1 0.19 4E-06 44.0 9.7 74 183-256 7-96 (260)
482 COG0334 GdhA Glutamate dehydro 95.1 0.32 6.9E-06 45.2 11.2 60 158-218 182-241 (411)
483 PRK14173 bifunctional 5,10-met 95.1 0.21 4.6E-06 44.4 9.8 96 163-281 134-230 (287)
484 PRK11880 pyrroline-5-carboxyla 95.1 0.17 3.6E-06 44.6 9.3 85 186-277 4-93 (267)
485 PRK13303 L-aspartate dehydroge 95.1 0.16 3.4E-06 44.9 9.1 86 186-275 3-89 (265)
486 PRK08278 short chain dehydroge 95.1 0.22 4.7E-06 44.0 10.1 75 183-257 5-100 (273)
487 PRK09260 3-hydroxybutyryl-CoA 95.1 0.11 2.5E-06 46.4 8.3 75 185-259 2-93 (288)
488 PRK06924 short chain dehydroge 95.1 0.28 6.2E-06 42.4 10.6 44 185-228 2-47 (251)
489 COG1712 Predicted dinucleotide 95.1 0.14 3.1E-06 43.5 8.1 44 186-229 2-48 (255)
490 PRK04266 fibrillarin; Provisio 95.1 0.39 8.4E-06 41.4 11.2 97 180-277 69-175 (226)
491 PLN02583 cinnamoyl-CoA reducta 95.1 0.53 1.1E-05 42.2 12.6 74 182-255 4-86 (297)
492 PTZ00146 fibrillarin; Provisio 95.0 0.39 8.4E-06 42.9 11.3 103 173-277 123-236 (293)
493 PRK12384 sorbitol-6-phosphate 95.0 0.21 4.6E-06 43.5 9.7 74 184-257 2-91 (259)
494 cd01079 NAD_bind_m-THF_DH NAD 95.0 0.18 3.9E-06 42.1 8.6 113 163-281 32-159 (197)
495 PRK06997 enoyl-(acyl carrier p 95.0 0.15 3.2E-06 44.7 8.8 75 183-257 5-94 (260)
496 PRK03612 spermidine synthase; 95.0 0.23 5E-06 48.4 10.7 96 182-279 296-416 (521)
497 KOG1200 Mitochondrial/plastidi 95.0 0.18 3.8E-06 42.1 8.3 72 185-256 15-99 (256)
498 PRK14186 bifunctional 5,10-met 95.0 0.24 5.2E-06 44.3 9.9 96 163-281 137-233 (297)
499 PRK06953 short chain dehydroge 95.0 0.17 3.6E-06 43.1 8.8 72 185-257 2-80 (222)
500 PRK07578 short chain dehydroge 95.0 0.42 9.1E-06 39.8 11.1 84 186-281 2-114 (199)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.8e-59 Score=416.28 Aligned_cols=285 Identities=44% Similarity=0.699 Sum_probs=262.5
Q ss_pred cccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300 8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
+.+||+.++...++| +++.+++.|+|+++||+|||+|+|+|++|++.++|.++...+|+++|||.+|+|+++|++|++
T Consensus 1 ~~~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~ 78 (339)
T COG1064 1 MMTMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTG 78 (339)
T ss_pred CcceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCcc
Confidence 357999999987777 888999999999999999999999999999999999999899999999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
|++||||.+-++..+|++|+||++|++|+|++.... |+..+|+|+||+++++++++++|+++++++||++.|+
T Consensus 79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCa 151 (339)
T COG1064 79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCA 151 (339)
T ss_pred CCCCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcC
Confidence 999999999788889999999999999999986543 5678999999999999999999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~ 247 (314)
..|+|++|++.. ++||++|+|.|.|++|.+++|+|+++|++|+++++++++. ++++++|++.+++..+++...+..+.
T Consensus 152 GiT~y~alk~~~-~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~~~~~ 229 (339)
T COG1064 152 GITTYRALKKAN-VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEAVKEI 229 (339)
T ss_pred eeeEeeehhhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHHhHhh
Confidence 999999998855 8999999999999999999999999999999999999887 55689999999998888887777777
Q ss_pred ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CC-cccchhhhhcCceeEeeeccc
Q 021300 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KP-LELPAFSLLMGEEEDSWWQHD 304 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~-~~~~~~~~~~~~~~i~~~~~~ 304 (314)
+|+++|+++ ..++...++.|+++|+++++|.++ .+ ..++...+++++++|.++...
T Consensus 230 ~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g 287 (339)
T COG1064 230 ADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVG 287 (339)
T ss_pred CcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecC
Confidence 999999999 778999999999999999999985 44 568899999999999854443
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.3e-57 Score=387.89 Aligned_cols=304 Identities=54% Similarity=0.896 Sum_probs=280.4
Q ss_pred CCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300 5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84 (314)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (314)
+..|++...+++..+++..+++..++++|+++++||+|||+++|+|++|++.+.+.++..++|.++|||.+|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 34566667777776666556777999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (314)
Q Consensus 85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~ 164 (314)
|++|++||||-+-....+|++|++|..|++++|++..+.|++.+.+|+.++|+|++|+++++.+++++|++++.+.||++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPl 163 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPL 163 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-CHHHHHH
Q 021300 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-DQDEMQA 243 (314)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~-~~~~~~~ 243 (314)
.|+..|+|.+|.+.+ +.||+++-|.|+|++|.+++|+||++|.+|+++.+++.+++++.+.|||+.+++.. ++|++++
T Consensus 164 LCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~ 242 (360)
T KOG0023|consen 164 LCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKA 242 (360)
T ss_pred hhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHH
Confidence 999999999999888 78999999999977999999999999999999999998889999999999988887 8999999
Q ss_pred HcCCccEEEEccC--CcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeeccccccCCCC
Q 021300 244 AMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQHDWGDEGDS 311 (314)
Q Consensus 244 ~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 311 (314)
+.+..|.++|++. ....+..++.+|+++|++|++|.+..+..+++..+.++++.|. ++..++..|.
T Consensus 243 ~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~--GS~vG~~ket 310 (360)
T KOG0023|consen 243 IMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIK--GSIVGSRKET 310 (360)
T ss_pred HHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEE--eeccccHHHH
Confidence 9888888888877 6667999999999999999999999999999999999999998 4544544443
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.4e-50 Score=346.41 Aligned_cols=281 Identities=26% Similarity=0.372 Sum_probs=242.4
Q ss_pred ccccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCC
Q 021300 9 HPKNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSK 84 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~ 84 (314)
..|++++|... .++++.++|.|++ .|+||+|++.++|||++|++.+...... .+.|.++|||.+|+|+++|+.
T Consensus 3 ~~~~A~vl~g~---~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 3 ADNLALVLRGK---GDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cccceeEEEcc---CceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 35888888654 4488999999988 9999999999999999999998765432 268999999999999999999
Q ss_pred CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccccccc
Q 021300 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (314)
Q Consensus 85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~ 164 (314)
|+++++||||++.|.. +|..|+.|.+|+||+|+.+.+.-.+ ..+|++++|+..++++++++|+++|++++| +
T Consensus 80 Vk~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l 151 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGA-L 151 (354)
T ss_pred ccccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcc-c
Confidence 9999999999999988 9999999999999999998765433 467999999999999999999999999987 4
Q ss_pred chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC---HHH
Q 021300 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD---QDE 240 (314)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~---~~~ 240 (314)
..+++.+++|.++.. +++|++|||+|+|++|+++...||++|+ +|++++-. +.+.+++++||++.+.+... ++.
T Consensus 152 ~ePLsV~~HAcr~~~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~-~~Rle~Ak~~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 152 IEPLSVGVHACRRAG-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLV-ANRLELAKKFGATVTDPSSHKSSPQE 229 (354)
T ss_pred ccchhhhhhhhhhcC-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecC-HHHHHHHHHhCCeEEeeccccccHHH
Confidence 456899999998766 8999999999999999999999999999 55555555 45557778899998876655 233
Q ss_pred HHHHc----C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeeec
Q 021300 241 MQAAM----G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWWQ 302 (314)
Q Consensus 241 ~~~~~----~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~~ 302 (314)
+.+.. + .+|++|||+|...++..++.+++.+|+++++|+-....+||+.++..+++.+.+.+
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~f 297 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSF 297 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeee
Confidence 22222 2 49999999999999999999999999999999988899999999999999998544
No 4
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=4.9e-49 Score=363.23 Aligned_cols=300 Identities=68% Similarity=1.188 Sum_probs=260.2
Q ss_pred CCCCCCCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEE
Q 021300 1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE 80 (314)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~ 80 (314)
|...|+...|||++++...+.++.++..+++.|+|+++||+|||.++|||++|++++.|.++...+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 66778888999999999988888899999999999999999999999999999999887665456789999999999999
Q ss_pred eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc
Q 021300 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (314)
Q Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~ 160 (314)
+|+++++|++||+|++.+...+|++|.+|++|.+++|++..+.+......|....|+|+||+.++.+.++++|+++++++
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 160 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA 160 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence 99999999999999876666689999999999999999865432111111223479999999999999999999999999
Q ss_pred ccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
++++++...|+|+++.....+++|++|||.|+|++|++++|+||.+|+++++++.+++++.++++++|++.++++.+.+.
T Consensus 161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~ 240 (360)
T PLN02586 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240 (360)
T ss_pred hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence 99999999999999977666789999999999999999999999999999888888877777888999999988777666
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+.+..+++|++||++|....+..++++++++|+++.+|...++..++...++.+++.+.+
T Consensus 241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g 300 (360)
T PLN02586 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGG 300 (360)
T ss_pred HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEE
Confidence 666666899999999986668899999999999999998766678888888888877763
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=4.7e-47 Score=330.42 Aligned_cols=283 Identities=24% Similarity=0.371 Sum_probs=241.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
+++.+.+..++| |+++++++++|++||||||+.|+|+|++|....+|..+.. +|.++|||++|+|++||++|+++++
T Consensus 3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 455555554454 9999999999999999999999999999999999998865 9999999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCcccc-ccccccCC-------------CCccCcccceEEeecCCceEECCCCC
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM-TYANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGT 156 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~~~~~-------------~~~~~g~~~~~~~v~~~~~~~~p~~~ 156 (314)
||+|+ ....+.||+|..|.+|.+|+|..... ...|.... .+...++|+||.++++..++++++..
T Consensus 80 GDhVI-~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVI-LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEE-EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99995 56677999999999999999975422 11121111 12223589999999999999999999
Q ss_pred CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (314)
Q Consensus 157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~ 235 (314)
+++.++.+.|...|.+.+..+..++++|+++.|+|.|.+|++++|-|+..|+ ++++++.++++. +++++||+++++|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl-~~A~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKL-ELAKKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHH-HHHHhcCCceeecc
Confidence 9999999999999999999899999999999999999999999999999999 788888888777 66689999999999
Q ss_pred CCH----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300 236 RDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 236 ~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~ 299 (314)
++. +.+.++++ ++|.+||++|+..++.+++.++.++|+.+++|..+. ..+++..++... +.++
T Consensus 238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~ 307 (366)
T COG1062 238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWK 307 (366)
T ss_pred hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEE
Confidence 876 34556666 899999999999999999999999999999999764 345666666666 5555
No 6
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8e-46 Score=343.21 Aligned_cols=291 Identities=63% Similarity=1.116 Sum_probs=246.5
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
.++.++...+.++.++..+++.|+|+++||+|||.++|||++|++.+.|.+....+|.++|||++|+|+++|+++++|++
T Consensus 5 ~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 5 NKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred ceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCC
Confidence 45566666666677888899999999999999999999999999998886644457899999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||||++.+...+|+.|.+|++|++++|++..+.+......|....|+|+||+.++++.++++|+++++++++++++...|
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 99998766666799999999999999998654221110112234799999999999999999999999999999999999
Q ss_pred hhhhhHhcCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300 171 VYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (314)
Q Consensus 171 a~~~l~~~~~-~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d 249 (314)
+|+++..... .++|++|+|.|+|++|++++|+|+.+|+++++++++++++.++++++|++.++++.+.+.+.+..+++|
T Consensus 165 a~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D 244 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMD 244 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCc
Confidence 9999876553 368999999999999999999999999999988888777667778999999988776555556556899
Q ss_pred EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
++||++|....+..++++++++|+++.+|.+.++..++...++.+++++.++
T Consensus 245 ~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~ 296 (375)
T PLN02178 245 FIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGS 296 (375)
T ss_pred EEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEe
Confidence 9999999876689999999999999999987666788888888898888743
No 7
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.7e-45 Score=335.49 Aligned_cols=293 Identities=52% Similarity=0.904 Sum_probs=250.7
Q ss_pred CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300 7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS 86 (314)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 86 (314)
..+.++++++...+ +.+++.+++.|+|+++||+|||.+++||++|++.+.+.++...+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 6 AEKKTTGWAARDPS--GHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred CCceEEEEEEecCC--CCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcc
Confidence 34446666666543 5588899999999999999999999999999998887665446789999999999999999999
Q ss_pred CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (314)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 166 (314)
+|++||+|++.+...+|++|.+|.+|++++|.+..+.+++.+..|....|+|+||+.++...++++|+++++++++.+++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 99999999877777789999999999999998865433222222334579999999999999999999999999999999
Q ss_pred hhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC
Q 021300 167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG 246 (314)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~ 246 (314)
.+.|||+++......++|++++|+|+|++|++++|+||.+|+++++++++++++..+.+++|++.++++.+.+.+.+...
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~ 243 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAAD 243 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcC
Confidence 99999999987776689999999988999999999999999999999988888878878899988877766555666666
Q ss_pred CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
++|++||++|...++..++++++++|+++.+|.+.++.+++...++.+++++.++
T Consensus 244 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~ 298 (357)
T PLN02514 244 SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGS 298 (357)
T ss_pred CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEE
Confidence 8999999999766789999999999999999987666778888888899888743
No 8
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.9e-45 Score=311.41 Aligned_cols=297 Identities=23% Similarity=0.323 Sum_probs=250.3
Q ss_pred CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300 6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV 85 (314)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 85 (314)
..++.+|+.+++..+.| |.++++.+++|+.+||+||+.++++|++|.+.+.|..+...+|.++|||++|+|+.+|++|
T Consensus 3 gkvI~CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred CCceEEeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCc
Confidence 35677888888876665 8899999999999999999999999999999999987767899999999999999999999
Q ss_pred CCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc--c-------------cccCCCCccCcccceEEeecCCceE
Q 021300 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--A-------------NKYHDGTITYGGYSDIMVADEHFVV 150 (314)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~-------------~~~~~~~~~~g~~~~~~~v~~~~~~ 150 (314)
+++++||+|+ ....+.|+.|.+|.++.+|+|....... . +..-+.+....+|+||.+++...++
T Consensus 81 ~~vk~GD~Vi-plf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~ 159 (375)
T KOG0022|consen 81 TTVKPGDHVI-PLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVA 159 (375)
T ss_pred cccCCCCEEe-eccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeE
Confidence 9999999995 6677799999999999999997753322 1 1111111223489999999999999
Q ss_pred ECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 021300 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA 229 (314)
Q Consensus 151 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga 229 (314)
++++..+.+.++.+.|.+.|.|.|..+.+.++||+++.|+|.|.+|+++++-||+.|| ++|.++.++++. +.+++||+
T Consensus 160 kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf-~~ak~fGa 238 (375)
T KOG0022|consen 160 KIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKF-EKAKEFGA 238 (375)
T ss_pred ecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHH-HHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999998 888888888777 55589999
Q ss_pred cEEecCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCC--cccchhhhhcCceeEe-
Q 021300 230 DSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGEEEDS- 299 (314)
Q Consensus 230 ~~~v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~--~~~~~~~~~~~~~~i~- 299 (314)
+.++|+.|. +.+.++++ ++|+.|||+|+..++..++...+.+ |+-+++|..+.. .++..++++. ++++.
T Consensus 239 Te~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~G 317 (375)
T KOG0022|consen 239 TEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKG 317 (375)
T ss_pred ceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEE
Confidence 999998853 56667766 7999999999999999999999998 999999998644 5555566654 44443
Q ss_pred eecccccc
Q 021300 300 WWQHDWGD 307 (314)
Q Consensus 300 ~~~~~~~~ 307 (314)
..+-.|..
T Consensus 318 s~FGG~K~ 325 (375)
T KOG0022|consen 318 SAFGGFKS 325 (375)
T ss_pred Eecccccc
Confidence 33334443
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=3.1e-44 Score=332.79 Aligned_cols=287 Identities=28% Similarity=0.407 Sum_probs=240.2
Q ss_pred ccchhhhccCC------CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 021300 11 KNAFGWAAKDT------SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84 (314)
Q Consensus 11 ~~~~~~~~~~~------~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 84 (314)
||++.+..++. ++.+++++++.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 78888887664 47799999999999999999999999999999999888654 357899999999999999999
Q ss_pred CCCCCCCCEEEecccccCCCCCccccCCCCCCCCcccccc-ccccCCC-------------CccCcccceEEeecCCceE
Q 021300 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYHDG-------------TITYGGYSDIMVADEHFVV 150 (314)
Q Consensus 85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~~~~-------------~~~~g~~~~~~~v~~~~~~ 150 (314)
++++++||||++.+. ..|+.|.+|+.|++|+|.+..... .|....+ ....|+|+||+.+++..++
T Consensus 80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 999999999976443 489999999999999998753211 1110000 1123799999999999999
Q ss_pred ECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC
Q 021300 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA 229 (314)
Q Consensus 151 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga 229 (314)
++|+++++++++.+++...|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++.+++++ ++++++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKL-ALARELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHcCC
Confidence 9999999999999999999999998666678999999999999999999999999999 587777777666 56689999
Q ss_pred cEEecCCCHHH---HHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300 230 DSFLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 230 ~~~v~~~~~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~ 300 (314)
+.++++.+.+. +.++++ ++|++||++|....+..++++++++|+++.+|...+ ...++...++.+++++.+
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 99998877543 333333 699999999987679999999999999999998643 456777888889999874
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.6e-43 Score=329.13 Aligned_cols=290 Identities=24% Similarity=0.316 Sum_probs=235.6
Q ss_pred CCcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCC
Q 021300 6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSK 84 (314)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~ 84 (314)
..+++||++++...+ +.+++++++.|+|+++||+|||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|++
T Consensus 6 ~~~~~mka~~~~~~~--~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 6 GKVITCKAAVAWGPG--EPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred ccceeeEEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 355679988886533 3477889999999999999999999999999999888654 2357899999999999999999
Q ss_pred CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccc-------cccC----------CCCccCcccceEEeecCC
Q 021300 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------NKYH----------DGTITYGGYSDIMVADEH 147 (314)
Q Consensus 85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-------~~~~----------~~~~~~g~~~~~~~v~~~ 147 (314)
+++|++||||++.+.. +|++|.+|.+|.+++|++...... +... ......|+|+||+.++..
T Consensus 84 v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~ 162 (381)
T PLN02740 84 VEDLKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA 162 (381)
T ss_pred CCcCCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence 9999999999876654 899999999999999998643110 0000 001136999999999999
Q ss_pred ceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH
Q 021300 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER 226 (314)
Q Consensus 148 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~ 226 (314)
.++++|+++++++++.+++++.|+|+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++. +++++
T Consensus 163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~-~~a~~ 241 (381)
T PLN02740 163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKF-EKGKE 241 (381)
T ss_pred HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHH-HHHHH
Confidence 9999999999999999999999999988766678999999999999999999999999999 588887777766 55588
Q ss_pred cCCcEEecCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCC--cccchhhhhcCcee
Q 021300 227 LGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGEEE 297 (314)
Q Consensus 227 ~ga~~~v~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~--~~~~~~~~~~~~~~ 297 (314)
+|++.++++.+. +.+.++.+ ++|++||++|+...+..++++++++ |+++.+|.+.++ ..++...+. ++++
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~ 320 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRS 320 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCe
Confidence 999998887652 23444444 7999999999877789999999996 999999987654 334444343 6777
Q ss_pred Eee
Q 021300 298 DSW 300 (314)
Q Consensus 298 i~~ 300 (314)
+.+
T Consensus 321 i~g 323 (381)
T PLN02740 321 ITG 323 (381)
T ss_pred EEE
Confidence 763
No 11
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.7e-44 Score=324.66 Aligned_cols=262 Identities=29% Similarity=0.399 Sum_probs=228.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++.+...+.+..++++++|.|+|++|||||||++++||+.|.+.+.|. .+..++|+++|.|++|+|+++|+++++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 67888888888877999999999999999999999999999999999987 33346899999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||||+.... ....|+|+||+.++++.++++|+++|+++||++++++.
T Consensus 81 ~GdrV~~~~~--------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGG--------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccC--------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 9999975210 00579999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~ 245 (314)
|||+++....++++|++|||+|+ |++|++++|+||++|+++++++.++++.+ +++++|++.++++.+.+ .+++++
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHc
Confidence 99999998888999999999986 99999999999999998888888888887 77999999999988864 444555
Q ss_pred C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEeeeccccc
Q 021300 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSWWQHDWG 306 (314)
Q Consensus 246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~~~ 306 (314)
+ ++|+|||++|... +..+++.|+++|+++.+|.+++ +..++...+..+...+.++...+.
T Consensus 208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 271 (326)
T COG0604 208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR 271 (326)
T ss_pred CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence 4 5999999999985 8899999999999999998873 556777777778888775554433
No 12
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-43 Score=324.53 Aligned_cols=281 Identities=22% Similarity=0.310 Sum_probs=228.4
Q ss_pred ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHh-cCCC--CCCCCCcccccccEEEEEeCCCC
Q 021300 9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKV 85 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v 85 (314)
..+++.++. .+..+++++++.| ++++||||||.++|||++|++.+. +..+ ...+|.++|||++|+|+++ ++
T Consensus 3 ~~~~~~~~~---~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 3 VKTQSCVVA---GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred ccceEEEEe---cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 456666665 3445888999987 689999999999999999999875 3332 2367999999999999999 78
Q ss_pred CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (314)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~ 165 (314)
++|++||||++.+.. +|++|.+|.+|.+++|++..+. +.........|+|+||++++++.++++|+++++++++ +.
T Consensus 77 ~~~~vGdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~ 152 (343)
T PRK09880 77 SGLKEGQTVAINPSK-PCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FA 152 (343)
T ss_pred ccCCCCCEEEECCCC-CCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hh
Confidence 899999999877654 8999999999999999986431 2111111247999999999999999999999987655 55
Q ss_pred hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--
Q 021300 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-- 242 (314)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~-- 242 (314)
.++.++|+++.+.. ..+|++|+|+|+|++|++++|+|+.+|+ ++++++++++++ ++++++|++.++++++.+...
T Consensus 153 ~~~~~a~~al~~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~ 230 (343)
T PRK09880 153 EPLAVAIHAAHQAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKLVNPQNDDLDHYK 230 (343)
T ss_pred cHHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEEecCCcccHHHHh
Confidence 66789999997765 4689999999999999999999999999 577777777666 666889999999887654322
Q ss_pred HHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 243 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
+..+++|++||++|...++..++++++++|+++.+|......+++...++.+++++.+.
T Consensus 231 ~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~ 289 (343)
T PRK09880 231 AEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGS 289 (343)
T ss_pred ccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEE
Confidence 12235999999999876789999999999999999987666788888888899888743
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.8e-43 Score=325.32 Aligned_cols=285 Identities=20% Similarity=0.278 Sum_probs=230.8
Q ss_pred ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300 9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
..||++++.. ..+.+++++++.|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|+++++|
T Consensus 11 ~~mka~~~~~--~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~ 85 (378)
T PLN02827 11 ITCRAAVAWG--AGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEF 85 (378)
T ss_pred ceeEEEEEec--CCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCccc
Confidence 4578777754 34458889999999999999999999999999999876632 467899999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCcccccccccc--------------CCCCccCcccceEEeecCCceEECCC
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY--------------HDGTITYGGYSDIMVADEHFVVRIPE 154 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~~p~ 154 (314)
++||+|++.+.. +|++|.+|++|.+++|++......+.. ..+....|+|+||+.+++..++++|+
T Consensus 86 ~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~ 164 (378)
T PLN02827 86 EKGDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDP 164 (378)
T ss_pred CCCCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCC
Confidence 999999876544 899999999999999987532111100 00011358999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEe
Q 021300 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFL 233 (314)
Q Consensus 155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v 233 (314)
++++++++.+++.+.++|+++....++++|++|||+|+|++|++++|+|+.+|++ +++++.++++. ++++++|++.++
T Consensus 165 ~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~-~~a~~lGa~~~i 243 (378)
T PLN02827 165 LAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKA-EKAKTFGVTDFI 243 (378)
T ss_pred CCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCcEEE
Confidence 9999999988888889998876666789999999999999999999999999995 55555566655 566899999988
Q ss_pred cCCCH--H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300 234 VSRDQ--D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPA-FSLLMGEEEDSW 300 (314)
Q Consensus 234 ~~~~~--~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~ 300 (314)
++++. + .++++++ ++|++||++|....+..+++.++++ |+++.+|.+..+..++. ..++.+++++.+
T Consensus 244 ~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g 318 (378)
T PLN02827 244 NPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKG 318 (378)
T ss_pred cccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEe
Confidence 87652 2 2334443 7999999999876689999999998 99999998765455544 457778888874
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.1e-43 Score=323.17 Aligned_cols=286 Identities=24% Similarity=0.359 Sum_probs=237.3
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
+||++++...+.+ +++++++.|+|+++||+|||.++|+|++|++.+.|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence 4899999876544 78899999999999999999999999999998887654 35789999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccc-cCCCC-----ccCcccceEEeecCCceEECCCCCCcccccc
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK-YHDGT-----ITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~-~~~~~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~ 163 (314)
+||+|++.+. .+|+.|.+|.+|.+++|.......... ...|. ...|+|+||+.+++..++++|+++++++++.
T Consensus 78 ~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 78 PGDYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999987655 489999999999999998532110000 00010 1359999999999999999999999999999
Q ss_pred cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE-- 240 (314)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-- 240 (314)
+++.+.++|.++.....+++|++|||+|+|++|++++|+|+.+|++ +++++++++++ ++++++|++.++++.+.+.
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~ 235 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKL-EWAREFGATHTVNSSGTDPVE 235 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCceEEcCCCcCHHH
Confidence 9999999998887777789999999999999999999999999995 77777776665 5558899999998876543
Q ss_pred -HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300 241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 241 -~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~ 300 (314)
+.+..+ ++|++||++|+..++..++++++++|+++.+|.+.. +.+++...++.+++++.+
T Consensus 236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~ 300 (358)
T TIGR03451 236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKS 300 (358)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEE
Confidence 444443 699999999987678999999999999999998754 356777788888888873
No 15
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=5e-43 Score=319.51 Aligned_cols=272 Identities=29% Similarity=0.433 Sum_probs=232.6
Q ss_pred hhhccCCC--CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 021300 15 GWAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92 (314)
Q Consensus 15 ~~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 92 (314)
.+..++.+ ..++++++|.|+|+++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 82 (329)
T TIGR02822 3 EVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGD 82 (329)
T ss_pred eeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCC
Confidence 34444444 4688999999999999999999999999999999988765444578999999999999999999999999
Q ss_pred EEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhh
Q 021300 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 172 (314)
Q Consensus 93 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 172 (314)
+|++.+...+|+.|.+|..|++++|+++.+. |....|+|+||+.++...++++|+++++++++++++.+.|||
T Consensus 83 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 155 (329)
T TIGR02822 83 RVGIAWLRRTCGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGY 155 (329)
T ss_pred EEEEcCccCcCCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHH
Confidence 9988777778999999999999999885431 234579999999999999999999999999999999999999
Q ss_pred hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252 (314)
Q Consensus 173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~ 252 (314)
+++.. ..+++|++|||+|+|++|++++|+|+.+|+++++++++++++ ++++++|++.++++.+.+ .+++|+++
T Consensus 156 ~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~-~~a~~~Ga~~vi~~~~~~-----~~~~d~~i 228 (329)
T TIGR02822 156 RALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAAR-RLALALGAASAGGAYDTP-----PEPLDAAI 228 (329)
T ss_pred HHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHhCCceeccccccC-----cccceEEE
Confidence 99975 558999999999999999999999999999998888887765 677899999988754321 24689999
Q ss_pred EccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~ 300 (314)
++.+...++..++++++++|+++.+|... ....++...++.+++++.+
T Consensus 229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g 277 (329)
T TIGR02822 229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRS 277 (329)
T ss_pred ECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEE
Confidence 98887778999999999999999999853 3346777777788888874
No 16
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.7e-43 Score=323.93 Aligned_cols=279 Identities=22% Similarity=0.331 Sum_probs=227.6
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++.+... ++.++++++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~~~~--~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVAWAA--GQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEEecC--CCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence 667776653 345888999999999999999999999999999998887655567999999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccc-cccccC-------------CCCccCcccceEEeecCCceEECCCCC
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYH-------------DGTITYGGYSDIMVADEHFVVRIPEGT 156 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~~ 156 (314)
||||++.+. .+|++|.+|+.|++|+|++.... +.+... ......|+|+||+.++...++++|+++
T Consensus 80 GdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999987554 48999999999999999875321 011000 001124799999999999999999999
Q ss_pred CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (314)
Q Consensus 157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~ 235 (314)
++++++.+++++.|+|+++....++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~-~~a~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKF-ELAKKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhCCCeEEcc
Confidence 9999999999999999998766678999999999999999999999999999 688887877766 55588999998887
Q ss_pred CC--H---HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--Ccccchhhhhc
Q 021300 236 RD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLM 293 (314)
Q Consensus 236 ~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~ 293 (314)
.+ . +.+.++++ ++|++||++|+...+..++++++++ |+++.+|.+.. +..+....++.
T Consensus 238 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 304 (368)
T TIGR02818 238 NDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT 304 (368)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc
Confidence 63 2 23444443 7999999999876789999999886 99999998643 34444454443
No 17
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.5e-42 Score=317.58 Aligned_cols=277 Identities=28% Similarity=0.409 Sum_probs=232.3
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++. +++.+++++++.|+|.++||+|||.++++|++|++.+.+.+.. ...|.++|||++|+|+++|+++++++
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 6777775 3456899999999999999999999999999999988765432 23578999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|++.+.. +|++|.+|.+|++++|.+.... .|....|+|+||+.++.+.++++|+++++++++.+++++.
T Consensus 78 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~------~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 150 (339)
T cd08239 78 VGDRVMVYHYV-GCGACRNCRRGWMQLCTSKRAA------YGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG 150 (339)
T ss_pred CCCEEEECCCC-CCCCChhhhCcCcccCcCcccc------cccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 99999876555 8999999999999999876431 1334579999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHHcC
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG 246 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~~~~ 246 (314)
|||+++.... +++|++|||+|+|++|++++|+++.+|++ ++++++++++. ++++++|++.++++++.+ .+.+..+
T Consensus 151 ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~ 228 (339)
T cd08239 151 TAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERL-ELAKALGADFVINSGQDDVQEIRELTS 228 (339)
T ss_pred HHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEEcCCcchHHHHHHHhC
Confidence 9999997654 78999999999999999999999999998 88877777766 455889999999887643 3333333
Q ss_pred --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEee
Q 021300 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSW 300 (314)
Q Consensus 247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~ 300 (314)
++|++||++|+...+..++++++++|+++.+|.... ..++. ..++.+++++.+
T Consensus 229 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g 284 (339)
T cd08239 229 GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQRTLIG 284 (339)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCCEEEE
Confidence 699999999988766889999999999999998654 23443 456778888873
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=9.4e-43 Score=322.68 Aligned_cols=286 Identities=22% Similarity=0.343 Sum_probs=234.7
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
+||++++...+ +.+++++++.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~ka~~~~~~~--~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 2 TCKAAVAWEAG--KPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred ccEEEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence 58888887643 3488999999999999999999999999999999888766567899999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccc-ccccc--------------CCCCccCcccceEEeecCCceEECCC
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKY--------------HDGTITYGGYSDIMVADEHFVVRIPE 154 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~~p~ 154 (314)
+||||++.+. .+|++|.+|.+|+++.|.+.... ..+.. .+.....|+|+||+.++...++++|+
T Consensus 80 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 80 PGDHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred cCCEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 9999986554 48999999999999999885321 01110 00111358999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (314)
Q Consensus 155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v 233 (314)
++++++++.+++.+.|+|.++.....+++|++|||+|+|++|++++|+|+.+|+ +++++++++++.+ +++++|++.++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~-~~~~~Ga~~~i 237 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE-QAKKFGVTEFV 237 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCceEE
Confidence 999999999999999999988766678999999999999999999999999999 7888888877764 55889999888
Q ss_pred cCCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300 234 VSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 234 ~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~ 300 (314)
++.+. +.++++.+ ++|++||++|....+..++++++++ |+++.+|.... +.+++...++ +++++.+
T Consensus 238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g 312 (369)
T cd08301 238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKG 312 (369)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEE
Confidence 87642 23334433 6999999999876688999999996 99999998764 3445544444 6777763
No 19
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.1e-42 Score=317.00 Aligned_cols=270 Identities=29% Similarity=0.366 Sum_probs=218.0
Q ss_pred ceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCC-cccccccEEEEEeCCCCCCCCCCCEEEecccccCCC
Q 021300 26 SPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCR 104 (314)
Q Consensus 26 ~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~ 104 (314)
++++.+.|.+.|++|+|||.++|||++|++.+.+..+....|. ++|||++|+|+++| .++.+++||||++.+.. +|+
T Consensus 14 ~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~-~Cg 91 (350)
T COG1063 14 RLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNI-PCG 91 (350)
T ss_pred ccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCc-CCC
Confidence 3667766778999999999999999999999999877666666 99999999999999 77889999999887666 999
Q ss_pred CCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEE-CCCCCCcccccccchhhhhhhhhhHhcCCCCC
Q 021300 105 SCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR-IPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183 (314)
Q Consensus 105 ~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 183 (314)
.|.+|+.|.+|+|++..+ .+....+...+|+|+||+.+|.++.+. +|+++ ..+++++..++.++|++.......++
T Consensus 92 ~C~~C~~G~~~~C~~~~~--~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~ 168 (350)
T COG1063 92 HCRYCRAGEYNLCENPGF--YGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRP 168 (350)
T ss_pred CChhHhCcCcccCCCccc--cccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCC
Confidence 999999999999995532 222222223689999999999755555 58887 56666788899999887544444567
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH-cCCcEEecCCCH---HHHHHHcC--CccEEEEccC
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVS 256 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~-~ga~~~v~~~~~---~~~~~~~~--~~d~v~d~~g 256 (314)
+++|+|+|+|++|++++++++.+|+ ++++++.+++|+ +++++ ++++.+++.... ..+.+.++ ++|++|||+|
T Consensus 169 ~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl-~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 169 GGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL-ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVG 247 (350)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCC
Confidence 7799999999999999999999998 555555666655 55566 777877776552 34445554 5999999999
Q ss_pred CcccHHHHHHhhccCCEEEEEcCCCCCc-ccchhhhhcCceeEeee
Q 021300 257 AVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~i~~~ 301 (314)
...++..++++++++|+++.+|.+.+.. .++...++.|++++.+.
T Consensus 248 ~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs 293 (350)
T COG1063 248 SPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGS 293 (350)
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEec
Confidence 8888999999999999999999987665 78889999999999854
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6.3e-42 Score=317.01 Aligned_cols=279 Identities=24% Similarity=0.345 Sum_probs=227.8
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
.||++.+... +++++++++|.|+|.++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~~a~~~~~~--~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 2 TCKAAVAWEA--GKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred cceEEEEecC--CCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence 4777776653 34588899999999999999999999999999999888766557899999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccc-cccccC-------------CCCccCcccceEEeecCCceEECCCC
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYH-------------DGTITYGGYSDIMVADEHFVVRIPEG 155 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~-------------~~~~~~g~~~~~~~v~~~~~~~~p~~ 155 (314)
+||+|++.+. .+|+.|.+|++|++++|.+.... +.|... ......|+|+||+.++...++++|++
T Consensus 80 vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 80 PGDHVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCEEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999986544 59999999999999999875311 001000 00113479999999999999999999
Q ss_pred CCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEec
Q 021300 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV 234 (314)
Q Consensus 156 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~ 234 (314)
+++++++.+++++.|+|+++....++++|++|||+|+|++|++++|+|+.+|+ +++++++++++.+ +++++|++.+++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~-~~~~lGa~~~i~ 237 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE-LAKKFGATDCVN 237 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHcCCCEEEc
Confidence 99999999999999999998666678999999999999999999999999999 6888888887765 558899999998
Q ss_pred CCCH-----HHHHHHcC-CccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC--Ccccchhhhh
Q 021300 235 SRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLL 292 (314)
Q Consensus 235 ~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~--~~~~~~~~~~ 292 (314)
+.+. +.+.++++ ++|++||++|+...+..++++++++ |+++.+|.... +..++...+.
T Consensus 238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 304 (368)
T cd08300 238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV 304 (368)
T ss_pred ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence 7653 23334444 7999999999866789999999886 99999998643 3344444444
No 21
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.5e-42 Score=316.15 Aligned_cols=284 Identities=26% Similarity=0.390 Sum_probs=234.0
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
+||++++...+ +.++++++|.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 2 ~~ka~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 2 KCKAAVAWEAG--KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred ccEEEEEccCC--CCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence 57777776543 3488999999999999999999999999999999887654 46789999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCC-------------CccCcccceEEeecCCceEECCCCC
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGT 156 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~~p~~~ 156 (314)
+||+|++.+. .+|++|.+|.+|.+++|++..+...+....+ ....|+|+||+.++...++++|+++
T Consensus 79 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 79 PGDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 9999976544 5999999999999999998654333222111 1135899999999999999999999
Q ss_pred CcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecC
Q 021300 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (314)
Q Consensus 157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~ 235 (314)
++++++.+++++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.+++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~-~~~~~~ga~~~i~~ 236 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKF-EKAKEFGATDFINP 236 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCCcEecc
Confidence 9999999999999999988666678999999999999999999999999999 688888777666 45578999998887
Q ss_pred CCH-----HHHHHHc-CCccEEEEccCCcccHHHHHHhhccC-CEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 236 RDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 236 ~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
.+. +.+.+.+ +++|++||++|+...+..++++++++ |+++.+|...+ ..+++...++. ++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~ 307 (365)
T cd08277 237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWK 307 (365)
T ss_pred ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEE
Confidence 642 3344444 37999999999776688999999885 99999998653 45666666664 66776
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=8.9e-42 Score=314.55 Aligned_cols=280 Identities=23% Similarity=0.313 Sum_probs=218.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
|+++++.. +++. ++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++ ++
T Consensus 1 mka~~~~~-~~~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKP-GKPG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecC-CCCC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 67777764 3333 889999999999999999999999999999999886532 245789999999999999999 99
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
|++||||++.+. .+|++|.+|.+|++++|.+..+...|. ....|+|+||+.++++.++++|++++ ++ +.+..+
T Consensus 78 ~~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p 150 (355)
T cd08230 78 LSPGDLVVPTVR-RPPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEP 150 (355)
T ss_pred CCCCCEEEeccc-cCCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC-cc-eeecch
Confidence 999999976554 489999999999999998754322121 12469999999999999999999998 43 344445
Q ss_pred hhhhhhhhHhc------CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEEecCCCHH
Q 021300 168 GITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD 239 (314)
Q Consensus 168 ~~ta~~~l~~~------~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~v~~~~~~ 239 (314)
+.+++.++... ..+++|++|+|+|+|++|++++|+||.+|+++++++++ .+++.++++++|++. +++.+.+
T Consensus 151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~ 229 (355)
T cd08230 151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP 229 (355)
T ss_pred HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc
Confidence 55544443221 12578999999999999999999999999999888873 233446778999987 4555433
Q ss_pred HH-HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--Ccccc----hhhhhcCceeEeee
Q 021300 240 EM-QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELP----AFSLLMGEEEDSWW 301 (314)
Q Consensus 240 ~~-~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~----~~~~~~~~~~i~~~ 301 (314)
.. ....+++|++||++|+...+..+++.++++|+++.+|.+.+ +.+++ ...++.+++++.++
T Consensus 230 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~ 298 (355)
T cd08230 230 VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS 298 (355)
T ss_pred hhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEe
Confidence 21 12235799999999987668999999999999999998765 44565 35677788888753
No 23
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=7e-42 Score=318.45 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=210.9
Q ss_pred cccchhhhccCCCCccceeeeeecCCC-------CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATG-------EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG 82 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG 82 (314)
-||++++.. ++.++++++|.|+|+ +|||||||.++|||++|++++.|.+. ..+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~~---~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYLG---PGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEec---CCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEc
Confidence 378887754 334888999999874 68999999999999999999887654 3578999999999999999
Q ss_pred CCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccc----cccccCCCCccCcccceEEeecCC--ceEECCCCC
Q 021300 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT----YANKYHDGTITYGGYSDIMVADEH--FVVRIPEGT 156 (314)
Q Consensus 83 ~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~----~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~ 156 (314)
+++++|++||||++.+.. +|++|.+|++|++|+|.+.... +.+.... ....|+|+||+.++.. +++++|+++
T Consensus 78 ~~V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-GGWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred CccccccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceeccccc-CCCCCceEEEEEechhhCceEECCCcc
Confidence 999999999999877655 7999999999999999974311 1111110 1246999999999963 799999987
Q ss_pred Cc----ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE
Q 021300 157 PL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232 (314)
Q Consensus 157 ~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~ 232 (314)
+. ++++.+.+++.++|+++.. .++++|++|||.|+|++|++++|+|+.+|++++++.+..+++.++++++|++.+
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v 234 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV 234 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEE
Confidence 53 3456778889999999875 458999999999899999999999999999866655444455577789999864
Q ss_pred ecCCCH---HHHHHHcC--CccEEEEccCCc--------------ccHHHHHHhhccCCEEEEEcCC
Q 021300 233 LVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 233 v~~~~~---~~~~~~~~--~~d~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
....+. +.+.++++ ++|++||++|.. .++..++++++++|+++.+|.+
T Consensus 235 ~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 235 DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred ecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence 433332 33445543 699999999986 3699999999999999999986
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.1e-40 Score=303.66 Aligned_cols=264 Identities=28% Similarity=0.411 Sum_probs=223.8
Q ss_pred cceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCC
Q 021300 25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC 103 (314)
Q Consensus 25 ~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c 103 (314)
++++++|.|++.++||+|||.++|+|++|++.+.+. .....+|.++|||++|+|+++|+++..+ +||+|++.+.. +|
T Consensus 11 ~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~-~c 88 (349)
T TIGR03201 11 MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI-PC 88 (349)
T ss_pred ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-CC
Confidence 788899999999999999999999999999877443 3234678999999999999999999887 99999876655 99
Q ss_pred CCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCC------CCCcccccccchhhhhhhhhhHh
Q 021300 104 RSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE------GTPLDATAPLLCAGITVYSPLRF 177 (314)
Q Consensus 104 ~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~ 177 (314)
++|.+|++|++|+|.+..+. |....|+|+||+.++.+.++++|+ ++++++++.+++.+.++|+++..
T Consensus 89 g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~ 161 (349)
T TIGR03201 89 GECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ 161 (349)
T ss_pred CCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh
Confidence 99999999999999875331 223469999999999999999999 89999999899999999999876
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH---HH---HHHHcC--Ccc
Q 021300 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DE---MQAAMG--TMD 249 (314)
Q Consensus 178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~---~~---~~~~~~--~~d 249 (314)
..+++|++|+|+|+|++|++++|+|+..|++++++++++++++ +++++|++.++++.+. +. ++++++ ++|
T Consensus 162 -~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d 239 (349)
T TIGR03201 162 -AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLE-MMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLR 239 (349)
T ss_pred -cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHhCCceEecCccccHHHHHHHHHhhcccCCCC
Confidence 4589999999999999999999999999999988888887775 5578999998887553 22 333333 565
Q ss_pred ----EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 250 ----GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 250 ----~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.+||++|+...+..++++++++|+++.+|.+..+..++..+++.+++++.
T Consensus 240 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 240 STGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARAL 293 (349)
T ss_pred CCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEE
Confidence 89999998877888999999999999999877667778788877777766
No 25
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.7e-40 Score=275.04 Aligned_cols=256 Identities=25% Similarity=0.307 Sum_probs=228.5
Q ss_pred CcccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 021300 7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS 86 (314)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 86 (314)
.|...+.+++...++.+.+++++.|+|+|.|+|++||-.|+|+|..|..+++|-+...+.|+++|.|++|+|+++|++++
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvt 84 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVT 84 (336)
T ss_pred CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcc
Confidence 35556778888889999999999999999999999999999999999999999887678999999999999999999999
Q ss_pred CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (314)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 166 (314)
++++||||+.. ...|.|+|+..+|...++++|+.+++++||++..
T Consensus 85 drkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~ll 129 (336)
T KOG1197|consen 85 DRKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLL 129 (336)
T ss_pred ccccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHH
Confidence 99999999852 3679999999999999999999999999999999
Q ss_pred hhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH-
Q 021300 167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA- 244 (314)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~- 244 (314)
...|||.-+++...+++|++|||+.+ |++|++++|+++..|+++|.++...+++ +++++.|+++.++++..|.+++.
T Consensus 130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~-~~akenG~~h~I~y~~eD~v~~V~ 208 (336)
T KOG1197|consen 130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKH-EIAKENGAEHPIDYSTEDYVDEVK 208 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHH-HHHHhcCCcceeeccchhHHHHHH
Confidence 99999999999999999999999975 9999999999999999999999988877 56688999999999998766654
Q ss_pred --cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 245 --MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 245 --~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
++ ++|+++|.+|... +...+.+|++.|++|.+|..++ .-.++...+--+.+++.
T Consensus 209 kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lv 267 (336)
T KOG1197|consen 209 KITNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLV 267 (336)
T ss_pred hccCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhc
Confidence 43 7999999999884 9999999999999999998765 34666666555555543
No 26
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.1e-39 Score=293.67 Aligned_cols=280 Identities=36% Similarity=0.633 Sum_probs=239.5
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++...+ +.+++++++.|+++++||+||+.++++|++|...+.|..+....|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVTEPG--GPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEccCC--CCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 6777776542 35888999999999999999999999999999988886644466889999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|++.+...+|++|.+|..|.++.|...... +....|++++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 999988777779999999999999999875421 2234689999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc--CCc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTM 248 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~~ 248 (314)
+|+++... .+.+|++|||+|+|++|++++++|+.+|++++++++++++.+.+ +++|++.++++...+....+. .++
T Consensus 152 a~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~ 229 (333)
T cd08296 152 TFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGA 229 (333)
T ss_pred HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCC
Confidence 99999776 68999999999999999999999999999999998887776544 889999998887654332221 479
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
|+++|++|....+..++++++++|+++.+|......+++...++.+++++.++
T Consensus 230 d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 282 (333)
T cd08296 230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGW 282 (333)
T ss_pred CEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEe
Confidence 99999997666789999999999999999987766677777778888888754
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-39 Score=296.25 Aligned_cols=275 Identities=25% Similarity=0.375 Sum_probs=221.2
Q ss_pred ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++..+ ..+++.+.+.|+| .++||+|||.++++|++|...+..... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~---~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTD---GIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCC---CceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Confidence 677777653 3488899999998 599999999999999999875432111 24688999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|++.+.. +|++|.+|.+|.++.|.+..+. +....|+|+||+.++++.++++|+++++++++.+. .+.
T Consensus 77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~ 147 (347)
T PRK10309 77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT 147 (347)
T ss_pred CCCEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence 99999877666 7999999999999999864321 23457999999999999999999999999988663 345
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHHcC
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG 246 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~~~~ 246 (314)
++++++.. ..+++|++|||+|+|++|++++|+|+.+|++ +++++++++++ ++++++|++.++++++. +.+.+...
T Consensus 148 ~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 225 (347)
T PRK10309 148 VGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKL-ALAKSLGAMQTFNSREMSAPQIQSVLR 225 (347)
T ss_pred HHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCceEecCcccCHHHHHHHhc
Confidence 57777644 4578999999999999999999999999997 56666776666 45688999998887653 33344432
Q ss_pred --Ccc-EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch---hhhhcCceeEee
Q 021300 247 --TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA---FSLLMGEEEDSW 300 (314)
Q Consensus 247 --~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~i~~ 300 (314)
++| ++|||+|+...+..++++++++|+++.+|.+.++..++. ..+..+++++.+
T Consensus 226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 285 (347)
T PRK10309 226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIG 285 (347)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEE
Confidence 688 999999987778999999999999999998765444432 356778888874
No 28
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.4e-38 Score=291.25 Aligned_cols=278 Identities=60% Similarity=1.060 Sum_probs=242.9
Q ss_pred CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccc
Q 021300 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100 (314)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 100 (314)
....+++++++.|+|.++||+|||.++++|++|++.+.+.+...++|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus 8 ~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 87 (337)
T cd05283 8 ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQV 87 (337)
T ss_pred CCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCC
Confidence 34669999999999999999999999999999999988876555678999999999999999999999999999877777
Q ss_pred cCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCC
Q 021300 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 (314)
Q Consensus 101 ~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~ 180 (314)
..|++|.+|..|.+|+|+.....+++....+....|+|++|+.++.+.++++|+++++++++.+++...+||+++....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~- 166 (337)
T cd05283 88 DSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG- 166 (337)
T ss_pred CCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-
Confidence 7999999999999999999876665555445566899999999999999999999999999999999999999998776
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
+++|++++|.|+|.+|++++++++..|++++++++++++...+ +++|++.+++.+..+......+++|++||++|....
T Consensus 167 ~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~ 245 (337)
T cd05283 167 VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHD 245 (337)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEECCCCcch
Confidence 7999999998889999999999999999999998887777555 789999988887765555555689999999998755
Q ss_pred HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
...++++++++|+++.+|.......++...++.+++++..
T Consensus 246 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 285 (337)
T cd05283 246 LDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAG 285 (337)
T ss_pred HHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEE
Confidence 8999999999999999998766556777777778888774
No 29
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.1e-39 Score=297.17 Aligned_cols=259 Identities=19% Similarity=0.180 Sum_probs=205.7
Q ss_pred CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC----CCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN----TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (314)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 96 (314)
+|+.+++++++.|+ +++||||||+++|||++|++++.|.+.. ..+|.++|||++|+|+++|.+ +|++||||++
T Consensus 10 ~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~ 86 (341)
T cd08237 10 RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVM 86 (341)
T ss_pred ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEE
Confidence 45679999999995 9999999999999999999999886532 357999999999999998764 7999999988
Q ss_pred cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhH
Q 021300 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (314)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 176 (314)
.+.. +|+ |..| +..|+|.+..+. +....|+|+||+.+++++++++|+++++++|+ +..++.++|+++.
T Consensus 87 ~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~ 154 (341)
T cd08237 87 VPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAIS 154 (341)
T ss_pred CCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHH
Confidence 7665 477 4455 456888765432 12246999999999999999999999998876 4457888899886
Q ss_pred hc--CCCCCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300 177 FY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252 (314)
Q Consensus 177 ~~--~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~ 252 (314)
.. ..+++|++|||+|+|++|++++|+++. .| .+++++++++++++. +++++++..++ +.. + ..++|++|
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~-a~~~~~~~~~~----~~~-~-~~g~d~vi 227 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDL-FSFADETYLID----DIP-E-DLAVDHAF 227 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHH-HhhcCceeehh----hhh-h-ccCCcEEE
Confidence 43 236899999999999999999999986 55 578888888776644 45666654321 111 1 12699999
Q ss_pred EccCC---cccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 253 DTVSA---VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 253 d~~g~---~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
|++|. ..++..++++++++|+++.+|.+..+.+++..+++.+++++.++
T Consensus 228 D~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~ 279 (341)
T cd08237 228 ECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGS 279 (341)
T ss_pred ECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEe
Confidence 99994 44689999999999999999987666778888888899998843
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.3e-38 Score=294.06 Aligned_cols=285 Identities=27% Similarity=0.343 Sum_probs=232.9
Q ss_pred cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC----
Q 021300 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK---- 87 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 87 (314)
|++++..++ +.+++++++.|.|.++||+|||.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTGPG--KPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcCCC--CCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccC
Confidence 455565544 35889999999999999999999999999999988887653467889999999999999999986
Q ss_pred --CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC-ceEECCCCCCccccccc
Q 021300 88 --FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPLDATAPL 164 (314)
Q Consensus 88 --~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~ 164 (314)
|++||+|++.+.+ +|++|.+|+.+.++.|.+..+...+.........|+|++|+.++++ .++++|+++++++++.+
T Consensus 80 ~~~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 80 EPLKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CccCCCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 9999999876555 8999999999999999886532111100011246999999999986 79999999999999888
Q ss_pred chhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH----
Q 021300 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---- 239 (314)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---- 239 (314)
++++.|||+++......++|++|||+|+|.+|++++++|+.+|+ +++++++++++. .+++++|++.++++++.+
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCCeEEcCcccccHHH
Confidence 89999999999888876799999999999999999999999999 888888777666 455789999888776431
Q ss_pred --HHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEee
Q 021300 240 --EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 240 --~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~~ 300 (314)
.+.+..+ ++|++||++|+...+..+++.++++|+++.+|.... ..+++...++.++.++.+
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIG 304 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence 3444443 699999999876668899999999999999997643 345555566778888764
No 31
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.9e-39 Score=274.21 Aligned_cols=275 Identities=23% Similarity=0.316 Sum_probs=242.2
Q ss_pred CCCCCCcccccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEE
Q 021300 2 GQAPEQEHPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVT 79 (314)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~ 79 (314)
|++..++..-++++|+.++.| +.+++.++++|.....+|+||..|+.|||+|++.++|.|+. +.+|.+-|.|++|.|+
T Consensus 11 ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv 90 (354)
T KOG0025|consen 11 SSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVV 90 (354)
T ss_pred ccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEE
Confidence 456678888999999999886 67888999999998889999999999999999999999984 5789999999999999
Q ss_pred EeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc
Q 021300 80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD 159 (314)
Q Consensus 80 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~ 159 (314)
.+|+++++|++||+|+.. ....|+|++|.+.+++.++++++.++.+
T Consensus 91 ~vGs~vkgfk~Gd~VIp~----------------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~ 136 (354)
T KOG0025|consen 91 AVGSNVKGFKPGDWVIPL----------------------------------SANLGTWRTEAVFSESDLIKVDKDIPLA 136 (354)
T ss_pred EecCCcCccCCCCeEeec----------------------------------CCCCccceeeEeecccceEEcCCcCChh
Confidence 999999999999999753 2467999999999999999999999999
Q ss_pred cccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEEecC
Q 021300 160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFLVS 235 (314)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~~v~~ 235 (314)
.||++.++..|||++|...-++++||+|+-.|+ +.+|.+.+|+||++|.+.+-++|+.+..+++ ++.+||+.++..
T Consensus 137 ~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTe 216 (354)
T KOG0025|consen 137 SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITE 216 (354)
T ss_pred hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecH
Confidence 999999999999999999999999999988898 9999999999999999999999987766555 456799998764
Q ss_pred CCH---HHHHHH--cCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe-eeccccccC
Q 021300 236 RDQ---DEMQAA--MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS-WWQHDWGDE 308 (314)
Q Consensus 236 ~~~---~~~~~~--~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~-~~~~~~~~~ 308 (314)
.+- +..+.. .....+.|+|+|+.. .....+.|.+||+.+.+|.++ .|+.++...++++++.+. ||++.|..+
T Consensus 217 eel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~ 295 (354)
T KOG0025|consen 217 EELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKE 295 (354)
T ss_pred HHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhc
Confidence 432 121111 226899999999986 889999999999999998776 799999999999999998 999999988
Q ss_pred CCC
Q 021300 309 GDS 311 (314)
Q Consensus 309 ~~~ 311 (314)
..+
T Consensus 296 ~~~ 298 (354)
T KOG0025|consen 296 HKS 298 (354)
T ss_pred cCC
Confidence 754
No 32
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.4e-38 Score=290.22 Aligned_cols=278 Identities=29% Similarity=0.408 Sum_probs=229.7
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CCC----------CCCCCcccccccEEEE
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGN----------TIYPIVPGHEIVGVVT 79 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~~----------~~~p~~~G~e~~G~V~ 79 (314)
||++++.. ++.+++++++.|+|+++||+||+.++++|++|+....+. ... ..+|.++|||++|+|+
T Consensus 1 mka~~~~~---~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHG---RKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEec---CCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 67777754 345889999999999999999999999999998765432 110 1368899999999999
Q ss_pred EeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcc
Q 021300 80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD 159 (314)
Q Consensus 80 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~ 159 (314)
++|+++++|++||+|+..+.. +|++|.+|++|.++.|++..+ .+. ....|+|++|+.++...++++|++++++
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~g~~a~~~~~~~~~~~~lP~~~~~~ 150 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGF--IGL----GGGGGGFAEYVVVPAYHVHKLPDNVPLE 150 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCce--ecc----CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 999999999999999876544 899999999999999987532 110 0126899999999999999999999999
Q ss_pred cccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300 160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ 238 (314)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~ 238 (314)
+++.+ ....+||+++. ...+++|++|+|+|+|.+|++++|+|+.+|+ +++++++++++. ++++++|++.++++++.
T Consensus 151 ~aa~~-~~~~ta~~~l~-~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~~ 227 (351)
T cd08233 151 EAALV-EPLAVAWHAVR-RSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEV 227 (351)
T ss_pred Hhhhc-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEECCCcc
Confidence 88755 57789999994 5568999999999999999999999999999 777777777666 45578999999988775
Q ss_pred HH---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 239 DE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 239 ~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
+. +.+..+ ++|++||++|....+..++++++++|+++.+|....+.+++...++.+++++.+.
T Consensus 228 ~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~ 295 (351)
T cd08233 228 DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGS 295 (351)
T ss_pred CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEE
Confidence 43 333333 5999999999766689999999999999999987766788888888888888743
No 33
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.2e-37 Score=288.80 Aligned_cols=285 Identities=25% Similarity=0.354 Sum_probs=227.6
Q ss_pred ccccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300 9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
.+||+..+.. +++.++++++|.|++.++||+|||.++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.+
T Consensus 6 ~~~~a~~~~~--~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 6 IKCKAAVLWE--PKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ceeEEEEEec--CCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 4577766654 444588999999999999999999999999999999888663 3578899999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCcccccc-cccc-------------CCCCccCcccceEEeecCCceEECCC
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKY-------------HDGTITYGGYSDIMVADEHFVVRIPE 154 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~~~-------------~~~~~~~g~~~~~~~v~~~~~~~~p~ 154 (314)
++||+|++.+ ..+|++|.+|++|.++.|+.....- .+.. .......|+|+||+.++.+.++++|+
T Consensus 83 ~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 9999998655 5699999999999999998753210 0100 01111368999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (314)
Q Consensus 155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v 233 (314)
++++++++.+++++.++|+++....++++|++|+|+|+|++|++++++++.+|+ +|+++++++++++.+ +++|++.++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i 240 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECI 240 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEe
Confidence 999999999999999999998777778999999999889999999999999999 788888888777555 789999888
Q ss_pred cCCCH-----HHHHHHc-CCccEEEEccCCcccHHHHHHhh-ccCCEEEEEcCCCCC--cccchhhhhcCceeEe
Q 021300 234 VSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEKP--LELPAFSLLMGEEEDS 299 (314)
Q Consensus 234 ~~~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~G~~~~~--~~~~~~~~~~~~~~i~ 299 (314)
+..+. ..+.++. +++|+++|++|....+..++..+ +.+|+++.+|..... .+++...+ .+++++.
T Consensus 241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~ 314 (373)
T cd08299 241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLL-LTGRTWK 314 (373)
T ss_pred cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHH-hcCCeEE
Confidence 76542 2233333 37999999999766677767665 579999999986543 34443323 3455665
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.4e-37 Score=282.12 Aligned_cols=276 Identities=22% Similarity=0.293 Sum_probs=221.1
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++.. ++.+++++++.|+|.++||+||+.++++|++|+..+.+.++...+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~---~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEK---PNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEec---CCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence 56666654 446889999999999999999999999999999988887654467899999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|++.+.. +|+.|.+|.+|++++|.+..+. +....|+|++|+.++...++++|+++++++++ +...+.+
T Consensus 78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~ 148 (339)
T PRK10083 78 GERVAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTI 148 (339)
T ss_pred CCEEEEcccc-CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHH
Confidence 9999877665 6999999999999999865321 12246899999999999999999999998876 5567778
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcC---
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--- 246 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~--- 246 (314)
+|.+.. ...+++|++|+|+|+|++|++++|+++. +|+++++++...+.+.++++++|++.++++++.+....+.+
T Consensus 149 a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~ 227 (339)
T PRK10083 149 AANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGI 227 (339)
T ss_pred HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCC
Confidence 886554 4558999999999999999999999996 69975554444444557778999999998876544333332
Q ss_pred CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
++|++||++|....+..++++++++|+++.+|..+.+..++...+..+.+++.
T Consensus 228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 280 (339)
T PRK10083 228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIF 280 (339)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEE
Confidence 46799999997666899999999999999999765444444444444555544
No 35
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.4e-37 Score=283.24 Aligned_cols=285 Identities=27% Similarity=0.407 Sum_probs=232.5
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
+||++++...+ ..+++++.+.|++.++||+|||.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++..++
T Consensus 2 ~~~a~~~~~~~--~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 2 KTTAAVVREPG--GPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred ccEEeeeccCC--CcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCC
Confidence 47888776633 3478899999999999999999999999999998887665 45688999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccc-cccccCCC---------------CccCcccceEEeecCCceEECC
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDG---------------TITYGGYSDIMVADEHFVVRIP 153 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~p 153 (314)
+||+|++.+ . .|+.|.+|..|..++|.+.... +.+...++ ....|+|++|+.++...++++|
T Consensus 79 ~Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 79 PGDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 999998754 3 8999999999999999875421 11111000 1235899999999999999999
Q ss_pred CCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEE
Q 021300 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSF 232 (314)
Q Consensus 154 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~ 232 (314)
+++++++++.+++.+.||+.++.....+++|++|||+|+|.+|++++|+|+.+|++ ++++++++++. ++.+++|++.+
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~-~~~~~~g~~~~ 235 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRL-ELAKELGATHV 235 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCcEE
Confidence 99999999999999999999987777789999999998899999999999999995 66666665554 66688999998
Q ss_pred ecCCCHH---HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEee
Q 021300 233 LVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 233 v~~~~~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~~ 300 (314)
+++++.+ .+.+.. .++|+++|++|+...+..++++++++|+++.+|... ....++...++.++.++.+
T Consensus 236 i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T cd08278 236 INPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG 309 (365)
T ss_pred ecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEE
Confidence 8876643 333333 479999999997667899999999999999999753 3456777666667777763
No 36
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9e-37 Score=280.77 Aligned_cols=262 Identities=21% Similarity=0.260 Sum_probs=217.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++..++ .+++.+.+.|.+.++||+|||.++++|++|++.+.+.+.....|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~~~~---~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIG---KVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCC---ccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 6778886643 3778889999999999999999999999999888776554466899999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~ 168 (314)
||+|+..+.. +|++|..|..|.++.|.+...+ +..+....|+|++|+.++.. .++++|+++++++++.++..+
T Consensus 78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~~----~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLGG----WKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCCC----ccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 9999876554 8999999999999999875311 11123457999999999874 899999999999999998999
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA 244 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~ 244 (314)
.|+|+++.. ..+++|++|||+|+|++|++++|+|+.+|+. ++++++.+++ .++++++|++.++++++.+. +...
T Consensus 153 ~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (351)
T cd08285 153 STGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNR-VELAKEYGATDIVDYKNGDVVEQILKL 230 (351)
T ss_pred hhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHcCCceEecCCCCCHHHHHHHH
Confidence 999999754 4589999999998899999999999999995 5555566544 57778899999988766433 3333
Q ss_pred c--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 245 M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 245 ~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
. .++|+++|++|+...+..++++++++|+++.+|....
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence 3 3699999999986668999999999999999998764
No 37
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.8e-36 Score=278.95 Aligned_cols=274 Identities=26% Similarity=0.380 Sum_probs=223.9
Q ss_pred CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccc
Q 021300 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVG 101 (314)
Q Consensus 22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 101 (314)
+..+++++++.|.+.+++|+||+.++++|+.|++.+.+.+. ..+|.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 10 ~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~- 87 (365)
T cd05279 10 GKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGP- 87 (365)
T ss_pred CCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCC-
Confidence 33488999999999999999999999999999998887654 3567899999999999999999999999999876654
Q ss_pred CCCCCccccCCCCCCCCccccc-cccccCC-------------CCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 102 SCRSCDSCAIDLENYCPKVIMT-YANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 102 ~c~~c~~c~~g~~~~c~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
.|++|.+|.+|.+++|.+..+. .+|.... .....|+|++|+.++.+.++++|+++++++++.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~ 167 (365)
T cd05279 88 QCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG 167 (365)
T ss_pred CCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccc
Confidence 8999999999999999886432 1121111 1123579999999999999999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCH--HH---H
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DE---M 241 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~---~ 241 (314)
+.++|+++.....+++|+++||+|+|++|++++++|+.+|++ ++++++++++. ++++++|++.+++.++. +. +
T Consensus 168 ~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~l 246 (365)
T cd05279 168 FSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKF-EKAKQLGATECINPRDQDKPIVEVL 246 (365)
T ss_pred hhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCCeecccccccchHHHHH
Confidence 999999987777789999999998899999999999999997 44555566555 55588999988887654 32 3
Q ss_pred HHHc-CCccEEEEccCCcccHHHHHHhhc-cCCEEEEEcCCC--CCcccchhhhhcCceeEe
Q 021300 242 QAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE--KPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 242 ~~~~-~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~ 299 (314)
.++. +++|+++|++|....+..++++++ ++|+++.+|... ....++...+ .+..++.
T Consensus 247 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~ 307 (365)
T cd05279 247 TEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIK 307 (365)
T ss_pred HHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEE
Confidence 3333 479999999987566899999999 999999999754 4567777776 5566665
No 38
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.4e-36 Score=275.28 Aligned_cols=278 Identities=27% Similarity=0.498 Sum_probs=231.5
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++...+.. .++++.+.|.+.++||+|||.++++|++|+..+.+.++. ..|.++|||++|+|+++|++++.|++
T Consensus 1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (338)
T PRK09422 1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKV 77 (338)
T ss_pred CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCC
Confidence 677777654332 227889999999999999999999999999888776542 34678999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|++.+.+.+|+.|.+|..+..++|.+.... +....|++++|+.++...++++|+++++++++.+++...|
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~t 150 (338)
T PRK09422 78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNA-------GYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVT 150 (338)
T ss_pred CCEEEEccCCCCCCCChhhcCCCcccCCCcccc-------CccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhH
Confidence 999998888889999999999999999876421 2345799999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H---HHHHHHc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEMQAAM 245 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~-~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~---~~~~~~~ 245 (314)
||+++. ...+++|++|||+|+|++|++++++++. .|++++++++++++++.+ +++|++.+++++. . +.+.+..
T Consensus 151 a~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~ 228 (338)
T PRK09422 151 TYKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKT 228 (338)
T ss_pred HHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhc
Confidence 999984 4558999999999999999999999998 499999999988877666 7899999888754 2 3444555
Q ss_pred CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+++|.++++.++...+..++++++++|+++.+|.......++...+..+..++.+
T Consensus 229 ~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 283 (338)
T PRK09422 229 GGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG 283 (338)
T ss_pred CCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEE
Confidence 6789665555555569999999999999999997655556666666667777653
No 39
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.3e-36 Score=273.01 Aligned_cols=280 Identities=28% Similarity=0.401 Sum_probs=233.0
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||+++... ..+..+++++++.|.+++++|+|||.++++|+.|+..+.+.+.....|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 79 (306)
T cd08258 1 MKALVKTG-PGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV 79 (306)
T ss_pred CeeEEEec-CCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence 45666654 34466889999999999999999999999999999888776533345789999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+.+++|+.|..|.++.++.|+.... + +....|+|++|+.++...++++|+++++++++ ++....+
T Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~ 151 (306)
T cd08258 80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG-I------GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAV 151 (306)
T ss_pred CCEEEEccCcCCCCCCcchhCcCcccCCCCce-e------eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHH
Confidence 99999888888999999999999999987421 1 23456899999999999999999999999886 7778889
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEEecCCCHHH---HHHHc-
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDE---MQAAM- 245 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~- 245 (314)
+|+++.....+++|++|||.|+|.+|.+++++|+..|++++++.+ +.++..++++++|++.+ ++...+. +.+..
T Consensus 152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~ 230 (306)
T cd08258 152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITD 230 (306)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcC
Confidence 999987777789999999988899999999999999999877643 33444567788999877 7665443 33333
Q ss_pred -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300 246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~ 300 (314)
.++|+++|++|....+...++.|+++|+++.+|... .+..++...++.+++++.+
T Consensus 231 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 287 (306)
T cd08258 231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIG 287 (306)
T ss_pred CCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEE
Confidence 369999999986656889999999999999999876 3567788888889999883
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=5.6e-36 Score=274.08 Aligned_cols=277 Identities=34% Similarity=0.498 Sum_probs=232.4
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
||++++...+ ..+++.+.+.|++.+++|+||+.++++|+.|+..+.+.+. ...+|.++|+|++|+|+++|+++.+
T Consensus 1 ~ka~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYG--KPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCC--CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 6777777643 3477888999999999999999999999999998877654 2356789999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
+++||+|+..+.. +|+.|..|..|..++|++..+. +....|+|++|+.++.+.++++|+++++++++.+++.
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 9999999876665 8999999999999999987642 2345799999999999999999999999999999999
Q ss_pred hhhhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 021300 168 GITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~ 243 (314)
+.|||+++... ..+.+|++|||+|+|.+|++++++|+..| .+++++++++++.+.+ +++|++.+++++.. +.+.+
T Consensus 151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~ 229 (340)
T cd05284 151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRE 229 (340)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHH
Confidence 99999999776 45789999999999889999999999999 7999888888777555 78999998887764 33334
Q ss_pred HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
..+ ++|+++|++|+...+..++++++++|+++.+|..+. ..++....+.++.++.
T Consensus 230 ~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~ 286 (340)
T cd05284 230 LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVI 286 (340)
T ss_pred HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEE
Confidence 443 699999999975568999999999999999997654 4455555455666665
No 41
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.4e-36 Score=268.60 Aligned_cols=228 Identities=26% Similarity=0.329 Sum_probs=189.6
Q ss_pred cccccccEEEEEeCCCCC------CCCCCCEEEecccccCCCCCccccCCCCCCCCcccccccccc--CCCCccCcccce
Q 021300 69 VPGHEIVGVVTEVGSKVS------KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY--HDGTITYGGYSD 140 (314)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~--~~~~~~~g~~~~ 140 (314)
++|||++|+|+++|++++ ++++||||++.+.. +|++|.+|..|++|+|++.... |.. ..+....|+|+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~~~~~~G~~ae 77 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKY--GHEALDSGWPLSGGYAE 77 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhc--CcccccCCcccccccee
Confidence 589999999999999999 89999999876654 8999999999999999875432 111 012235799999
Q ss_pred EEeecCC-ceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChh
Q 021300 141 IMVADEH-FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPS 218 (314)
Q Consensus 141 ~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~ 218 (314)
|+.+++. .++++|+++++++++++++.+.|+|+++++.. ..+|++|||+|+|++|++++|+||.+|++ +++++++++
T Consensus 78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~ 156 (280)
T TIGR03366 78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPD 156 (280)
T ss_pred eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 9999987 79999999999999999999999999997766 47999999999999999999999999997 766655655
Q ss_pred hHHHHHHHcCCcEEecCCCH-HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhc
Q 021300 219 KKSEAIERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLM 293 (314)
Q Consensus 219 ~~~~~~~~~ga~~~v~~~~~-~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~ 293 (314)
+ .++++++|++.+++..+. +.+.+++. ++|++||++|....+..++++++++|+++.+|... .+.+++...++.
T Consensus 157 r-~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~ 235 (280)
T TIGR03366 157 R-RELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR 235 (280)
T ss_pred H-HHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence 4 477789999998876553 33444443 69999999998877899999999999999999753 356788889999
Q ss_pred CceeEeee
Q 021300 294 GEEEDSWW 301 (314)
Q Consensus 294 ~~~~i~~~ 301 (314)
+++++.++
T Consensus 236 ~~~~i~g~ 243 (280)
T TIGR03366 236 RWLTIRGV 243 (280)
T ss_pred CCcEEEec
Confidence 99998843
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.9e-36 Score=272.64 Aligned_cols=247 Identities=21% Similarity=0.249 Sum_probs=192.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccC-hhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGIC-HSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVS 86 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~-~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~ 86 (314)
|+++++. +++.+++++++.|+|+++||||||.+++|| ++|.+.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~---~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLS---GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEe---CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 5666664 355689999999999999999999999996 6999888886542 3579999999999999999998
Q ss_pred CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (314)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 166 (314)
+|++||||++. |..|..|.. ...|+|+||+.++++.++++|++++++. +.+.
T Consensus 78 ~~~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~- 129 (308)
T TIGR01202 78 GFRPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA- 129 (308)
T ss_pred CCCCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-
Confidence 69999999752 333332211 1258999999999999999999998865 4443
Q ss_pred hhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHHHHHHc
Q 021300 167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245 (314)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~ 245 (314)
...+||+++.+.. .++++++|+|+|++|++++|+|+.+|++++++. +.++++ +.++. ..++++.+. ..
T Consensus 130 ~~~~a~~~~~~~~--~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl-~~a~~---~~~i~~~~~-----~~ 198 (308)
T TIGR01202 130 LAATARHAVAGAE--VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRR-DGATG---YEVLDPEKD-----PR 198 (308)
T ss_pred HHHHHHHHHHhcc--cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-Hhhhh---ccccChhhc-----cC
Confidence 4689999997642 468999999999999999999999999755544 444433 33232 334443321 23
Q ss_pred CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
.++|++||++|+...+..++++++++|+++.+|.+.++.+++...++.+++++.+
T Consensus 199 ~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~ 253 (308)
T TIGR01202 199 RDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRI 253 (308)
T ss_pred CCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEE
Confidence 4799999999997678999999999999999998776677888888888888774
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.1e-35 Score=275.70 Aligned_cols=286 Identities=20% Similarity=0.246 Sum_probs=230.6
Q ss_pred CCcccccchhhhc--cCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC----------CCCCCCCcccc
Q 021300 6 EQEHPKNAFGWAA--KDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW----------GNTIYPIVPGH 72 (314)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~----------~~~~~p~~~G~ 72 (314)
-.|.+|+++++.. ++.+ ..+++++++.|.++++||+|||.+++||++|++.+.+.. +....+.++||
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 4677899988753 2333 357888999999999999999999999999988776641 11112358999
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152 (314)
Q Consensus 73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 152 (314)
|++|+|+++|++++.+++||+|++.+.. .|+.|..|.+|..++|+...+ +|. ....|+|++|+.++...++++
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~--~g~----~~~~g~~a~y~~v~~~~l~~i 160 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRI--WGY----ETNYGSFAQFALVQATQLMPK 160 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEeccc-cccCccccccccccccccccc--ccc----cCCCCcceeEEEechHHeEEC
Confidence 9999999999999999999999876554 799999999999999986432 221 124699999999999999999
Q ss_pred CCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300 153 PEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229 (314)
Q Consensus 153 p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga 229 (314)
|+++++++++.+++.+.|||+++... .++++|++++|+|+ |++|++++++++.+|++++++++++++.+ +++++|+
T Consensus 161 P~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~-~~~~~G~ 239 (393)
T cd08246 161 PKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE-YCRALGA 239 (393)
T ss_pred CCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHcCC
Confidence 99999999999999999999998754 56899999999997 99999999999999999988888877765 4467999
Q ss_pred cEEecCCCH-------------------------HHHHHHcC---CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 230 DSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 230 ~~~v~~~~~-------------------------~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+.+++++.. ..+.++.+ ++|++||++|+. .+..++++++++|+++.+|...
T Consensus 240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 318 (393)
T cd08246 240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTT 318 (393)
T ss_pred CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccC
Confidence 988876331 12333433 699999999985 5899999999999999998754
Q ss_pred C-CcccchhhhhcCceeEee
Q 021300 282 K-PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 282 ~-~~~~~~~~~~~~~~~i~~ 300 (314)
. +..++...++.+++++.+
T Consensus 319 ~~~~~~~~~~l~~~~~~i~g 338 (393)
T cd08246 319 GYNHTYDNRYLWMRQKRIQG 338 (393)
T ss_pred CCCCCCcHHHHhhheeEEEe
Confidence 3 345666667777777653
No 44
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.7e-35 Score=272.24 Aligned_cols=284 Identities=26% Similarity=0.403 Sum_probs=232.1
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++.+...+. .+++++++.|++.++||+|||.++++|+.|+..+.+.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVGK--PLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCCC--CceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 67888876543 478889999999999999999999999999998887665 356789999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccc-------------cccCCCCccCcccceEEeecCCceEECCCCCC
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------------NKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-------------~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~ 157 (314)
||+|+..+ .++|++|.+|.+++.++|.+..+..+ |.........|+|++|+.++.+.++++|++++
T Consensus 78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99997654 44999999999999999987532111 11111113468999999999999999999999
Q ss_pred cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR 236 (314)
Q Consensus 158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~ 236 (314)
+++++.+++.+.+||.++.....+++|+++||+|+|.+|++++++++..|++ ++++++++++.+ +.+++|++.+++++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~-~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE-LARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH-HHHHhCCeEEeCCC
Confidence 9999999999999999987777789999999998899999999999999996 777777776664 55789999988877
Q ss_pred CHH---HHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC--CCcccchhhhhcCceeEe
Q 021300 237 DQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 237 ~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~--~~~~~~~~~~~~~~~~i~ 299 (314)
..+ .+.+.. +++|+++|+++....+...+++++++|+++.+|... ....++..++..+.+.+.
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 305 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQ 305 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEE
Confidence 643 333443 369999999996656899999999999999998764 345667766665555544
No 45
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.6e-35 Score=274.44 Aligned_cols=284 Identities=24% Similarity=0.280 Sum_probs=225.9
Q ss_pred ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++.+. +++.+++.+++.|.|. +++|+||+.++++|++|...+.|.++..++|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 6677764 3466889999999984 99999999999999999999988776556789999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccc--cc--------cccCC---CCccCcccceEEeecCC--ceEECCC
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT--YA--------NKYHD---GTITYGGYSDIMVADEH--FVVRIPE 154 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~~--------~~~~~---~~~~~g~~~~~~~v~~~--~~~~~p~ 154 (314)
+||+|++.+.. +||+|.+|+.+.+++|++.... +. +.... .....|+|++|+.++.+ .++++|+
T Consensus 78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999876665 6999999999999999875221 00 11100 01236899999999987 8999999
Q ss_pred CCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEe
Q 021300 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (314)
Q Consensus 155 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v 233 (314)
++++++++.++....+||+++ ....+.+|++|||+|+|++|++++++|+..|+ +++++++++++. +++++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~-~~~~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL-EMARSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCcEEE
Confidence 999999999999999999999 55668999999999889999999999999998 588887887766 455667433566
Q ss_pred cCCCHH-H---HHHHcC--CccEEEEccCCc---------------------ccHHHHHHhhccCCEEEEEcCCCC-Ccc
Q 021300 234 VSRDQD-E---MQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGKLVLVGAPEK-PLE 285 (314)
Q Consensus 234 ~~~~~~-~---~~~~~~--~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~~v~~G~~~~-~~~ 285 (314)
++...+ . +.+... ++|++||++|+. ..+..++++++++|+++.+|..+. ...
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 665542 3 333333 699999999753 247889999999999999997654 344
Q ss_pred cchhhhhcCceeEee
Q 021300 286 LPAFSLLMGEEEDSW 300 (314)
Q Consensus 286 ~~~~~~~~~~~~i~~ 300 (314)
++...++.++.++..
T Consensus 315 ~~~~~~~~~~~~i~~ 329 (386)
T cd08283 315 FPIGAAMNKGLTLRM 329 (386)
T ss_pred cCHHHHHhCCcEEEe
Confidence 555556667776663
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.5e-35 Score=269.52 Aligned_cols=278 Identities=28% Similarity=0.420 Sum_probs=233.1
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++..++.+ +++.+.+.|.+.+++|+||+.+++||+.|+..+.+..+...+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 788888765443 888899999999999999999999999999988887665567889999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~ 168 (314)
||+|+. +...+|++|.+|..|..++|.+.... +....|+|++|+.++.. .++++|++++.++++.+++..
T Consensus 79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~ 150 (345)
T cd08260 79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF 150 (345)
T ss_pred CCEEEE-CCCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence 999976 55568999999999999999985321 22236899999999974 999999999999999999999
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HHH---HHHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDE---MQAA 244 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~~---~~~~ 244 (314)
.+||+++....++.++++++|+|+|.+|++++++|+..|++++++++++++.+.+ +++|++.+++.+. .+. +.+.
T Consensus 151 ~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~ 229 (345)
T cd08260 151 ATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDL 229 (345)
T ss_pred HHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHH
Confidence 9999998766778999999999999999999999999999999998988887666 6799999988876 433 2233
Q ss_pred c-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC---cccchhhhhcCceeEe
Q 021300 245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP---LELPAFSLLMGEEEDS 299 (314)
Q Consensus 245 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~---~~~~~~~~~~~~~~i~ 299 (314)
. +++|++||++|+...+...+++++++|+++.+|..... ..++...++.++..+.
T Consensus 230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08260 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIV 288 (345)
T ss_pred hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEE
Confidence 3 37999999998655688899999999999999976532 3555555556666665
No 47
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.1e-35 Score=270.99 Aligned_cols=279 Identities=24% Similarity=0.364 Sum_probs=225.3
Q ss_pred ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++.+.. ++.+++.+++.|.| .++||+|||.++++|+.|+..+.+.++..+.|.++|+|++|+|+++|+++++++
T Consensus 1 ~ka~~~~~---~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLG---PGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEec---CCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence 56666654 33478889999999 999999999999999999998888776567789999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~ 167 (314)
+||+|+.. ..++|+.|.+|.+|...+|++..+... .+....|+|++|+.++.+ .++++|+++++++++.+++.
T Consensus 78 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~ 152 (347)
T cd05278 78 PGDRVSVP-CITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI 152 (347)
T ss_pred CCCEEEec-CCCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence 99999865 445999999999999999988543221 122357899999999987 99999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~ 243 (314)
+.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|. +++++.+++++. ++++++|++.+++++..+. +..
T Consensus 153 ~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~i~~ 230 (347)
T cd05278 153 LPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERL-DLAKEAGATDIINPKNGDIVEQILE 230 (347)
T ss_pred hhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHhCCcEEEcCCcchHHHHHHH
Confidence 99999998 45668999999998889999999999999997 777776665444 5667899999888776543 333
Q ss_pred Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEe
Q 021300 244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDS 299 (314)
Q Consensus 244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~ 299 (314)
.. +++|++||+++....+..++++|+++|+++.+|.......... ...+.+++.+.
T Consensus 231 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
T cd05278 231 LTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFK 289 (347)
T ss_pred HcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEE
Confidence 33 3699999999875468999999999999999987654322212 22234555555
No 48
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.4e-35 Score=271.20 Aligned_cols=278 Identities=19% Similarity=0.250 Sum_probs=219.6
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---------CCCCCcccccccEEEEEe
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---------TIYPIVPGHEIVGVVTEV 81 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---------~~~p~~~G~e~~G~V~~v 81 (314)
||++++. +++.+++++.+.|++.+++|+||+.++++|+.|+..+.|.... .++|.++|+|++|+|+++
T Consensus 1 mka~~~~---~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCH---GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEe---cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 6777774 3445889999999999999999999999999999888775311 146778999999999999
Q ss_pred CCCCC--CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC-ceEECCCCCCc
Q 021300 82 GSKVS--KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPL 158 (314)
Q Consensus 82 G~~v~--~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~~p~~~~~ 158 (314)
|+.++ +|++||+|+..+ ..+|++|..|++|..++|....+ ++. .....|+|++|+.++++ .++++|+++++
T Consensus 78 G~~v~~~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~---~~~~~g~~~~~~~~~~~~~~~~lP~~~~~ 151 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQ-IVPCWNCRFCNRGQYWMCQKHDL--YGF---QNNVNGGMAEYMRFPKEAIVHKVPDDIPP 151 (350)
T ss_pred CCCcccCCCCCCCEEEECC-cCCCCCChHHhCcCcccCcCccc--eee---ccCCCCcceeeEEcccccceEECCCCCCH
Confidence 99999 899999997654 44999999999999999975432 221 11256899999999987 67899999999
Q ss_pred ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238 (314)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~ 238 (314)
++++.+ .++.++|+++ ....+++|++|+|.|+|.+|++++++|+.+|++++++++..+++.++.+++|++.+++++..
T Consensus 152 ~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~ 229 (350)
T cd08256 152 EDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEV 229 (350)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCc
Confidence 998877 8889999998 45568999999997789999999999999998655444444444577788999988887653
Q ss_pred ---HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhh-hcCceeEe
Q 021300 239 ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSL-LMGEEEDS 299 (314)
Q Consensus 239 ---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~i~ 299 (314)
+.+.+..+ ++|++||++|+...+..++++++++|+++.+|.......++...+ ..+++.+.
T Consensus 230 ~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 296 (350)
T cd08256 230 DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVL 296 (350)
T ss_pred CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEE
Confidence 33444443 599999999975568889999999999999997655445444433 23444444
No 49
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.6e-35 Score=270.37 Aligned_cols=279 Identities=27% Similarity=0.359 Sum_probs=230.6
Q ss_pred ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++++... +.+++++++.|+| .++||+|||+++++|+.|+.++.|.++...+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~---~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGP---GKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecC---CceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence 567776543 3488899999986 899999999999999999999988766555688999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~ 167 (314)
+||+|++.+.. .|++|.+|..+.++.|....+. .+....|++++|+.++.. .++++|++++.++++.+++.
T Consensus 78 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~ 150 (345)
T cd08286 78 VGDRVLISCIS-SCGTCGYCRKGLYSHCESGGWI------LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDI 150 (345)
T ss_pred CCCEEEECCcC-CCCCChHHHCcCcccCCCcccc------cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccch
Confidence 99999876555 7999999999999999875432 123456899999999987 89999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~ 243 (314)
+.+||.++.....+.+|+++||+|+|.+|.+++|+++.+| .+++++++++.+ ..+.+++|++.++++...+. +.+
T Consensus 151 ~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~ 229 (345)
T cd08286 151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNR-LEVAKKLGATHTVNSAKGDAIEQVLE 229 (345)
T ss_pred hHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCCceeccccccHHHHHHH
Confidence 9999998766667899999999988999999999999999 688776666555 45667899999888775433 233
Q ss_pred HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
... ++|++||++|....+..+++.++++|+++.+|....+..++...++.+++++..
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08286 230 LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITT 288 (345)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEe
Confidence 332 699999999876668889999999999999997655566666666667777753
No 50
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.5e-35 Score=267.22 Aligned_cols=272 Identities=26% Similarity=0.375 Sum_probs=224.9
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++...+ ...+++++.+.|+++++||+||+.++++|++|+..+.+ .....+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 5677775533 56688888888889999999999999999999887764 222245778999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|++.+.. +|+.|++|..|.++.|.+..+. +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCEEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 9999887766 8999999999999999875321 2335789999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM 248 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~ 248 (314)
||+++.. .++++|++++|+|+ |++|++++++|+.+|++++++++ . +..+++|++.+++.++. +.+.++.+++
T Consensus 151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~-~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 224 (325)
T cd08264 151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----K-DWLKEFGADEVVDYDEVEEKVKEITKMA 224 (325)
T ss_pred HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----H-HHHHHhCCCeeecchHHHHHHHHHhCCC
Confidence 9999976 56899999999998 99999999999999999888763 2 34477999888877642 3344444789
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~ 299 (314)
|+++|++|+. .+..++++|+++|+++.+|... ....++...+..++.++.
T Consensus 225 d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (325)
T cd08264 225 DVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISII 275 (325)
T ss_pred CEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEE
Confidence 9999999986 5899999999999999998753 345666666666666655
No 51
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.7e-35 Score=269.19 Aligned_cols=278 Identities=31% Similarity=0.460 Sum_probs=228.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC------------CCCCCCcccccccEEE
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG------------NTIYPIVPGHEIVGVV 78 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~------------~~~~p~~~G~e~~G~V 78 (314)
||++.+...+ ..+++++.|.|++.++||+||+.++++|++|+..+.+.++ ...+|.++|+|++|+|
T Consensus 1 ~~a~~~~~~~--~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPG--KPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCC--CCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 6677666543 3378889999999999999999999999999998877543 1245678999999999
Q ss_pred EEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCc
Q 021300 79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158 (314)
Q Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~ 158 (314)
+++|++++++++||+|+..+.. .|++|..|.++.++.|.+.... +....|++++|+.++.+.++++|+++++
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~ 150 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDP 150 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCH
Confidence 9999999999999999877666 8999999999999999764211 2235689999999999999999999999
Q ss_pred ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCC
Q 021300 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD 237 (314)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~ 237 (314)
++++.+++.+.|||+++.....+++|++|+|+|+|++|++++|+|+..|+ ++++++.++++.. ..+++|++.+++.++
T Consensus 151 ~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~ 229 (350)
T cd08240 151 ALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE-AAKAAGADVVVNGSD 229 (350)
T ss_pred HHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHhCCcEEecCCC
Confidence 99999999999999999888767789999999889999999999999999 6777777766664 447899988888765
Q ss_pred HH---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 238 QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 238 ~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.+ .+.+..+ ++|++||++|....+..++++|+++|+++.+|.......++...+..++.++.
T Consensus 230 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~ 295 (350)
T cd08240 230 PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQ 295 (350)
T ss_pred ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEE
Confidence 43 3333333 79999999997667899999999999999999876544455544555666665
No 52
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.8e-35 Score=267.29 Aligned_cols=274 Identities=27% Similarity=0.389 Sum_probs=226.7
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++...+ +.+++++.+.|.+.++|++||+.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGFK--QGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCCC--CCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 6677766543 34888999999999999999999999999999888776654566789999999999999999989999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|++.+. .+|++|++|..|.++.|+..... +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~ 150 (334)
T PRK13771 79 GDRVASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM 150 (334)
T ss_pred CCEEEECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence 999987655 49999999999999999885431 2335799999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM 248 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~ 248 (314)
+|+++... .++++++++|+|+ |.+|++++++++..|++++++++++++.+.+ +++ ++.+++.++. +.+.+. +++
T Consensus 151 a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~ 226 (334)
T PRK13771 151 VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGA 226 (334)
T ss_pred HHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCC
Confidence 99999877 6899999999998 9999999999999999999999988877655 667 7666665421 223333 479
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCc--ccchhhhhcCceeEe
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPAFSLLMGEEEDS 299 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~--~~~~~~~~~~~~~i~ 299 (314)
|+++|++|+.. ...+++.++++|+++.+|...... .++...+..+++++.
T Consensus 227 d~~ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 278 (334)
T PRK13771 227 DIVIETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEII 278 (334)
T ss_pred cEEEEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEE
Confidence 99999999874 889999999999999999764322 244444455666665
No 53
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.6e-34 Score=263.90 Aligned_cols=279 Identities=34% Similarity=0.483 Sum_probs=235.3
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++.+..++++. +.+.+.+.|.+.+++|+||+.++++|+.|.....+.+. ...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 6778887766665 67788899999999999999999999999998887665 235678899999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..+.+ +|+.|++|..++.++|...... +....|++++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 151 (338)
T cd08254 80 VGDRVAVPAVI-PCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL 151 (338)
T ss_pred CCCEEEECCCC-CCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 99999876654 8999999999999999654221 334578999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH--HHc--
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--AAM-- 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~--~~~-- 245 (314)
+||+++.....+++++++||.|+|.+|++++++|+..|++++++++++++.+.+ +++|++.+++..+.+... ...
T Consensus 152 ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd08254 152 TPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLG 230 (338)
T ss_pred HHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcC
Confidence 999999888878999999998889999999999999999999888888877655 778998888776542211 222
Q ss_pred CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
+++|+++|++|....+..++++|+++|+++.+|.......++...+..++.++.
T Consensus 231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 284 (338)
T cd08254 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRII 284 (338)
T ss_pred CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEE
Confidence 369999999987667899999999999999999766556667777777777665
No 54
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.2e-34 Score=270.94 Aligned_cols=284 Identities=19% Similarity=0.252 Sum_probs=229.5
Q ss_pred Ccccccchhhhc--cCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC----------CCCCCC-Ccccc
Q 021300 7 QEHPKNAFGWAA--KDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW----------GNTIYP-IVPGH 72 (314)
Q Consensus 7 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~----------~~~~~p-~~~G~ 72 (314)
+++.||++.+.. +++| +.+++.+++.|.|.++||+||+.++++|..|.+...+.. +....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567799999965 5554 568889999999999999999999999999987654432 101223 37999
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152 (314)
Q Consensus 73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 152 (314)
|++|+|+++|++++.+++||+|++.+.. +|++|.+|..|.+++|+...+ .|. ....|+|++|+.++...++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~----~~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRI--WGY----ETNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCcccccccccc--ccc----cCCCccceEEEEechHHeEEC
Confidence 9999999999999999999999866544 899999999999999976432 111 124789999999999999999
Q ss_pred CCCCCcccccccchhhhhhhhhhHh--cCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC
Q 021300 153 PEGTPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229 (314)
Q Consensus 153 p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga 229 (314)
|+++++++++.+++...+||+++.. ...+.+|++++|+|+ |.+|++++++++.+|++++++++++++.+ .++++|+
T Consensus 157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~-~~~~~g~ 235 (398)
T TIGR01751 157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE-YCRELGA 235 (398)
T ss_pred CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHcCC
Confidence 9999999999999999999999865 455789999999998 99999999999999999988887776664 4467999
Q ss_pred cEEecCCCHH-------------------------HHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 230 DSFLVSRDQD-------------------------EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 230 ~~~v~~~~~~-------------------------~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+.++++++.+ .+.+.. +++|++|||+|.. .+..++++++++|+++.+|....
T Consensus 236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC
Confidence 9988865421 122233 2699999999975 48899999999999999998654
Q ss_pred -CcccchhhhhcCceeEe
Q 021300 283 -PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 283 -~~~~~~~~~~~~~~~i~ 299 (314)
+..++...+..+++.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~ 332 (398)
T TIGR01751 315 YNHDYDNRYLWMRQKRIQ 332 (398)
T ss_pred CCCCcCHHHHhhcccEEE
Confidence 35566666666776665
No 55
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.2e-34 Score=263.75 Aligned_cols=280 Identities=33% Similarity=0.561 Sum_probs=236.6
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++..++ +..+++.+++.|.+.++||+||+.++++|+.|..++.+.++. ...|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 7888887655 557889999999999999999999999999999888776542 24567899999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..+...+|+.|++|..+..+.|+..... +....|++++|+.++.+.++++|+++++++++.++....
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999988777779999999999999999875321 234568999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~ 245 (314)
|||+++... .+++++++||+|+ +.+|++++++|+.+|++++++++++++.+.+ +++|++.++++++.+. +.+..
T Consensus 153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence 999998775 5899999999997 7799999999999999999999998877655 7899999888876533 33443
Q ss_pred --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEee
Q 021300 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDSW 300 (314)
Q Consensus 246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~~ 300 (314)
+++|+++|+.+.......++++++++|+++.+|..+.. .+++...++.++.++.+
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVG 288 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEE
Confidence 36999999887666789999999999999999976542 36666666677777763
No 56
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.4e-34 Score=265.06 Aligned_cols=276 Identities=23% Similarity=0.329 Sum_probs=221.5
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
||++++.. .+..+++.+++.|+|.++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLK--AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEec--CCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 56676654 33568999999999999999999999999999998765531 12346789999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
+++||+|+..+.. +|++|.+|..+.+|+|+...+. +...+|+|++|+.++.+.++++|+++++++++. ...
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~ 149 (341)
T PRK05396 79 FKVGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDP 149 (341)
T ss_pred CCCCCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhH
Confidence 9999999877555 8999999999999999875321 233579999999999999999999999988874 355
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~ 243 (314)
+.++++++.. ...+|++++|.|+|.+|++++|+++.+|+ +++++.+++++ .++.+++|++.++++++.+ .+.+
T Consensus 150 ~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~ 226 (341)
T PRK05396 150 FGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYR-LELARKMGATRAVNVAKEDLRDVMAE 226 (341)
T ss_pred HHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH-HHHHHHhCCcEEecCccccHHHHHHH
Confidence 5666655433 24689999998889999999999999999 56666555554 4667889999988877643 3333
Q ss_pred Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
.. +++|++||+.|....+..++++++++|+++.+|..+....++...++.+++++.+
T Consensus 227 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~ 285 (341)
T PRK05396 227 LGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKG 285 (341)
T ss_pred hcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEE
Confidence 43 3799999999987678999999999999999998765555666777778887763
No 57
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3.2e-34 Score=265.10 Aligned_cols=270 Identities=25% Similarity=0.365 Sum_probs=212.1
Q ss_pred CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (314)
Q Consensus 22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 98 (314)
++.+++++.+.|.+.++||+|||.++++|++|+..+.+... ....|.++|||++|+|+++|+++++|++||+|++.+
T Consensus 26 ~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 105 (364)
T PLN02702 26 VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEP 105 (364)
T ss_pred CCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcC
Confidence 34578888888999999999999999999999988765321 123577899999999999999999999999998766
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (314)
Q Consensus 99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 178 (314)
.+ +|++|..|.+|.++.|++..+ .+ .....|+|++|+.++...++++|+++++++++.. ..+.++|+++ ..
T Consensus 106 ~~-~~~~c~~c~~g~~~~c~~~~~--~~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~ 176 (364)
T PLN02702 106 GI-SCWRCNLCKEGRYNLCPEMKF--FA----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RR 176 (364)
T ss_pred CC-CCCCCcchhCcCcccCCCccc--cC----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-Hh
Confidence 65 899999999999999987422 11 1124689999999999999999999999888742 2344577777 44
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC--CH---HHHHHH----cCCcc
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQ---DEMQAA----MGTMD 249 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~--~~---~~~~~~----~~~~d 249 (314)
.++.+|++++|+|+|++|++++++++.+|++.+++++..+.+.++++++|++.+++.. .. +.+.++ .+++|
T Consensus 177 ~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 256 (364)
T PLN02702 177 ANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGID 256 (364)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCC
Confidence 5589999999998899999999999999996444444444455677889998876542 22 223222 13699
Q ss_pred EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
++||++|+...+..++++++++|+++.+|....+..++...+..+++++.+
T Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 307 (364)
T PLN02702 257 VSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVG 307 (364)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEE
Confidence 999999976668999999999999999997544455566677777777763
No 58
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.6e-34 Score=261.94 Aligned_cols=257 Identities=34% Similarity=0.549 Sum_probs=220.5
Q ss_pred ccchhhhccCC--CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300 11 KNAFGWAAKDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
|+++++...+. +..+++++.+.|.+.++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 56677765443 2357777888888999999999999999999999888876555678899999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 168 (314)
++||+|.+.+...+|++|.+|..+.++.|+...+. +....|+|++|+.++...++++|+++++.+++.+++.+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 153 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG 153 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence 99999988877789999999999999999877532 22356899999999999999999999999999999999
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCc
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 248 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~ 248 (314)
.+||+++ ...++++|++++|+|+|++|++++++++..|++++++++++++++.+ +++|++.+++.... ..+++
T Consensus 154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~v 226 (329)
T cd08298 154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPL 226 (329)
T ss_pred HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcc
Confidence 9999999 56778999999999999999999999999999999998888777555 78999887766542 12469
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
|+++++.+....+..++++++++|+++.+|...
T Consensus 227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 259 (329)
T cd08298 227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHM 259 (329)
T ss_pred cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCC
Confidence 999998776667899999999999999988543
No 59
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.4e-34 Score=262.13 Aligned_cols=274 Identities=28% Similarity=0.418 Sum_probs=223.3
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++.+..+ +.+++.+.+.|++.++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~---~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKP---GRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCC---CceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence 566666543 45888999999999999999999999999999988876655556789999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+. .+|+.|..|..+++|.|...... +....|+|++|+.++++ ++++|+++++++++.+ ..+.+
T Consensus 78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~ 147 (337)
T cd08261 78 GDRVVVDPY-ISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAI 147 (337)
T ss_pred CCEEEECCC-CCCCCChhhhCcCcccCCCCCee-------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHH
Confidence 999976544 48999999999999999543211 12246899999999999 9999999999998866 56778
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC-
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG- 246 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~- 246 (314)
+++++ ....+.+|+++||+|+|.+|.+++|+|+.+|++++++++++++...+ +++|++.++++...+ .+.+..+
T Consensus 148 a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~ 225 (337)
T cd08261 148 GAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDG 225 (337)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCC
Confidence 88887 45668999999999889999999999999999999998887777544 789999999887653 3333333
Q ss_pred -CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 247 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
++|+++|++|+...+..++++|+++|+++.+|....+..++...+..+++.+.
T Consensus 226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~ 279 (337)
T cd08261 226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTIL 279 (337)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEE
Confidence 59999999987656899999999999999998765544555555555555554
No 60
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=6e-34 Score=259.58 Aligned_cols=276 Identities=46% Similarity=0.791 Sum_probs=228.6
Q ss_pred chhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 021300 13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92 (314)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 92 (314)
++++..++ ..+++.+.+.|.+.+++|+||+.++++|+.|...+.+.+....+|.++|+|++|+|+++|++++++++||
T Consensus 2 ~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd 79 (330)
T cd08245 2 AAVVHAAG--GPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGD 79 (330)
T ss_pred eEEEecCC--CCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCC
Confidence 44454432 3588899999999999999999999999999998887665456788999999999999999999999999
Q ss_pred EEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhh
Q 021300 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 172 (314)
Q Consensus 93 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 172 (314)
+|++.+...+|++|.+|.++.++.|++..+. +....|++++|+.++...++++|+++++++++.+++...+||
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~ 152 (330)
T cd08245 80 RVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVY 152 (330)
T ss_pred EEEEccccCCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHH
Confidence 9987766678999999999999999985432 122468999999999999999999999999999999999999
Q ss_pred hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEE
Q 021300 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252 (314)
Q Consensus 173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~ 252 (314)
.++.. ..+++|+++||+|+|.+|++++++++..|.+++++++++++.+.+ +++|++.+++....+......+++|+++
T Consensus 153 ~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi 230 (330)
T cd08245 153 SALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVIL 230 (330)
T ss_pred HHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEE
Confidence 99976 458999999999888899999999999999999999998887665 7789988887765444333335799999
Q ss_pred EccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS 299 (314)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~ 299 (314)
++++.......++++++++|+++.+|..... ..+...+++.++.++.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (330)
T cd08245 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIA 278 (330)
T ss_pred ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEE
Confidence 9988766789999999999999999875432 2333445555666664
No 61
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.3e-34 Score=270.05 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=202.5
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhH-hcCC-CC-----CCCCCcccccccEEEEEeCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEW-GN-----TIYPIVPGHEIVGVVTEVGS 83 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~-~~~~-~~-----~~~p~~~G~e~~G~V~~vG~ 83 (314)
|+++++.. +..++++++|.|+|+++||+|||.++|||++|++.+ .+.. +. ..+|+++|||++|+|+++|+
T Consensus 3 ~~a~~~~~---~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMYG---KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEEc---CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 55555543 335889999999999999999999999999999876 3432 11 24688999999999999999
Q ss_pred CCC-CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC----ceEECCCCCCc
Q 021300 84 KVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPL 158 (314)
Q Consensus 84 ~v~-~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~ 158 (314)
+++ +|++||||++.+.. .|++|.+|. + + +....|+|+||+.++.+ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~-~---------~--------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP-G---------Y--------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCC-C---------c--------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 59999999876655 688888772 1 0 12357999999999986 68999999999
Q ss_pred cccccc-c--hhhhhhhhhh--------HhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEEEeCChhhHHHH
Q 021300 159 DATAPL-L--CAGITVYSPL--------RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEA 223 (314)
Q Consensus 159 ~~aa~~-~--~~~~ta~~~l--------~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~---~vi~v~~~~~~~~~~ 223 (314)
++++.+ + +. .+++.++ .....+++|++|+|+|+ |++|++++|+|+.+|+ +|++++.++++++.+
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 988743 3 22 2233332 23455899999999985 9999999999999764 788888888777544
Q ss_pred HHHc--------CCc-EEecCCC-H---HHHHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCC-CC--Ccc
Q 021300 224 IERL--------GAD-SFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP-EK--PLE 285 (314)
Q Consensus 224 ~~~~--------ga~-~~v~~~~-~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~-~~--~~~ 285 (314)
+++ |++ .++++.+ . +.+.++++ ++|++||++|....+..++++++++|+++.++.. .. +.+
T Consensus 220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 565 666 4666543 2 23444444 6999999998877799999999999988877543 22 357
Q ss_pred cchhhhhcCceeEee
Q 021300 286 LPAFSLLMGEEEDSW 300 (314)
Q Consensus 286 ~~~~~~~~~~~~i~~ 300 (314)
++...++.+++++.+
T Consensus 299 ~~~~~~~~~~~~i~g 313 (410)
T cd08238 299 LNFYNVHYNNTHYVG 313 (410)
T ss_pred ccHHHhhhcCcEEEE
Confidence 788888889998884
No 62
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=5.4e-34 Score=265.44 Aligned_cols=266 Identities=24% Similarity=0.391 Sum_probs=216.1
Q ss_pred ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW------G-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (314)
Q Consensus 24 ~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 96 (314)
.+++++++.|+++++||+|||+++++|++|+..+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 38899999999999999999999999999998776321 1 1356789999999999999999999999999987
Q ss_pred cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCC-------Ccccccccchhhh
Q 021300 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT-------PLDATAPLLCAGI 169 (314)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~-------~~~~aa~~~~~~~ 169 (314)
.+.. +|+.|..|..|.++.|..+... |....|+|++|+.++.+.++++|+.+ +++ ++.++.++.
T Consensus 118 ~~~~-~~~~~~~c~~~~~~~~~~~~~~-------g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ 188 (384)
T cd08265 118 EEMM-WCGMCRACRSGSPNHCKNLKEL-------GFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS 188 (384)
T ss_pred CCCC-CCCCChhhhCcCcccCCCccee-------eecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence 7665 9999999999999999875421 22347999999999999999999863 444 556777889
Q ss_pred hhhhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH------HHH
Q 021300 170 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ------DEM 241 (314)
Q Consensus 170 ta~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~------~~~ 241 (314)
+||+++... .++++|++|||+|+|++|++++++|+..|+ +++++++.++ +.++++++|++.++++++. +.+
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~v 267 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEE-RRNLAKEMGADYVFNPTKMRDCLSGEKV 267 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-HHHHHHHcCCCEEEcccccccccHHHHH
Confidence 999998655 578999999999889999999999999999 6777777766 5577789999998887632 334
Q ss_pred HHHcC--CccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 242 QAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 242 ~~~~~--~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.++.. ++|+++|++|+. ..+..++++|+++|+++.+|.......++...+..+..++.
T Consensus 268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~ 328 (384)
T cd08265 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIV 328 (384)
T ss_pred HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEE
Confidence 44443 699999999863 35788999999999999999765555555556666666665
No 63
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.1e-34 Score=263.09 Aligned_cols=284 Identities=27% Similarity=0.451 Sum_probs=230.3
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK--- 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 87 (314)
|+++++...+ ..+++.+++.|.+.++||+||+.+++||++|+..+.+.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGPN--PPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence 6777876643 34788899999999999999999999999999988876653 67889999999999999999988
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccc-ccc-cccc-------------CCCCccCcccceEEeecCCceEEC
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI-MTY-ANKY-------------HDGTITYGGYSDIMVADEHFVVRI 152 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~-~~~-~~~~-------------~~~~~~~g~~~~~~~v~~~~~~~~ 152 (314)
|++||+|+..+ ..+|+.|.+|..+..++|++.. |.+ ++.. .......|++++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999997644 4499999999999999999753 111 0000 000124689999999999999999
Q ss_pred CCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcE
Q 021300 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS 231 (314)
Q Consensus 153 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~ 231 (314)
|+++++++++.+++.+.|||.++.....+.+++++||+|+|.+|++++++|+.+|++ +++++.++++.. .++++|++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~-~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA-KAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHhCCce
Confidence 999999999999999999999998877789999999998899999999999999998 777777776664 447899999
Q ss_pred EecCCCHHH---HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300 232 FLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 232 ~v~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~ 299 (314)
+++++..+. +.+.. .++|++||++++......++++|+++|+++.+|.... ...++...++.++.++.
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKII 310 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEE
Confidence 998876543 33333 3699999999986458899999999999999987542 34555566555666654
No 64
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.3e-34 Score=260.89 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=205.1
Q ss_pred ccchhhhccCCC---CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300 11 KNAFGWAAKDTS---GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS 86 (314)
Q Consensus 11 ~~~~~~~~~~~~---~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 86 (314)
||++++..+++| +.+++.++|.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 678888776655 56888899999999999999999999999999988886642 35789999999999999999999
Q ss_pred C-CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccc
Q 021300 87 K-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (314)
Q Consensus 87 ~-~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~ 165 (314)
+ |++||+|+..+ ...|+|++|+.++++.++++|+++++++++.++
T Consensus 81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 6 99999997421 014899999999999999999999999999888
Q ss_pred hhhhhhhhhhHhcCCCCCCCEEEEE-c-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---
Q 021300 166 CAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--- 240 (314)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~vlI~-G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--- 240 (314)
+...|||.++.. ... ++++++|+ | +|++|++++|+|+.+|++++++++++++++. ++++|++.+++++..++
T Consensus 127 ~~~~ta~~~~~~-~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~ 203 (324)
T cd08291 127 VNPLTALGMLET-ARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDL-LKKIGAEYVLNSSDPDFLED 203 (324)
T ss_pred ccHHHHHHHHHh-hcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCcEEEECCCccHHHH
Confidence 888999865543 333 56666665 4 5999999999999999999998888777644 47899999998876543
Q ss_pred HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-ccchhhhhcCceeEe
Q 021300 241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-ELPAFSLLMGEEEDS 299 (314)
Q Consensus 241 ~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-~~~~~~~~~~~~~i~ 299 (314)
+.+... ++|++||++|+.. ....+++++++|+++.+|...+. . .++...++.+++++.
T Consensus 204 v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 204 LKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred HHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 334433 6999999999875 78889999999999999976432 2 366677777888876
No 65
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.2e-33 Score=259.10 Aligned_cols=279 Identities=24% Similarity=0.331 Sum_probs=223.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++++.. ++.++++++++|+|. ++||+|||.++++|+.|+....+.++ ..+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~a~~~~~---~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKG---PGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEec---CCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence 56666653 346889999999985 99999999999999999988877655 34578899999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCcccccccchh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~ 167 (314)
+||+|+..+.. +|++|.+|.++..+.|++...... .......|++++|+.++.+ .++++|+++++++++.+++.
T Consensus 77 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 77 VGDRVVSPFTI-ACGECFYCRRGQSGRCAKGGLFGY---AGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred CCCEEEEcccC-CCCCChHHhCcCcccCCCCccccc---cccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 99999876654 899999999999999987532100 0011236899999999864 99999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCH---HHHHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~---~~~~~ 243 (314)
+.|||+++.. ..+++|++|||+|+|.+|++++++|+.+|+ +++++++.+++. .+++++|+.. ++.+.. ..+.+
T Consensus 153 ~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL-ERAAALGAEP-INFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHhCCeE-EecCCcCHHHHHHH
Confidence 9999999976 557999999999889999999999999997 788876665554 5667899763 455443 33444
Q ss_pred Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300 244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~ 300 (314)
+. +++|++||++|+...+...+++++++|+++.+|... ....++....+.+++.+.+
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 289 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF 289 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEE
Confidence 43 369999999997666899999999999999999875 3344555556667777653
No 66
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-33 Score=257.04 Aligned_cols=268 Identities=28% Similarity=0.396 Sum_probs=216.6
Q ss_pred CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcC-CC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 021300 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (314)
Q Consensus 23 ~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 99 (314)
..+++++.+.|.+.++||+|||.++++|+.|+..+.+. .+ ....|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 87 (343)
T cd05285 8 GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPG 87 (343)
T ss_pred CceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccc
Confidence 55888899999999999999999999999998876432 11 1245778999999999999999999999999987654
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcC
Q 021300 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179 (314)
Q Consensus 100 ~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~ 179 (314)
. +|++|.+|..|.+++|++..+.. .....|+|++|+.++.+.++++|+++++++++.+ ..+.+|++++ ...
T Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~ 158 (343)
T cd05285 88 V-PCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRA 158 (343)
T ss_pred c-CCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-Hhc
Confidence 4 99999999999999998643311 1124689999999999999999999999998766 5778899887 456
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH------HHHHHcC--CccE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMG--TMDG 250 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~------~~~~~~~--~~d~ 250 (314)
.+++|++++|+|+|.+|++++|+|+.+|++ ++++++++++. ++.+++|++.++++++.+ .+.+... ++|+
T Consensus 159 ~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~ 237 (343)
T cd05285 159 GVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRL-EFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDV 237 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCE
Confidence 689999999998899999999999999997 77776776665 455789999988877543 2334433 5999
Q ss_pred EEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 251 v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+||++|....+...+++++++|+++.+|.......++...+..+.+.+.+
T Consensus 238 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 287 (343)
T cd05285 238 VIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRG 287 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEE
Confidence 99999986558999999999999999997655455555556666666653
No 67
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.2e-33 Score=260.52 Aligned_cols=262 Identities=28% Similarity=0.349 Sum_probs=210.3
Q ss_pred ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++++. +++.+++++++.|.+ .++||+|||+++++|+.|++...|.++ ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~---~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYG---GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEe---cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence 5666663 345688999999996 799999999999999999998888765 45689999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccc---cCCCCccCcccceEEeecCC--ceEECCCCCCcc---cc
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK---YHDGTITYGGYSDIMVADEH--FVVRIPEGTPLD---AT 161 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~---~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~---~a 161 (314)
+||+|++.+.. +|+.|..|.+|.+++|.+..+.+.+. +.......|+|++|+.++.. .++++|++++++ ++
T Consensus 77 ~Gd~V~~~~~~-~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 77 VGDRVVVPFNV-ACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCEEEEeCCC-CCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 99999765544 79999999999999998743222110 11112246899999999975 899999999998 56
Q ss_pred cccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
+.++..+.++|+++ ....+++|++|+|+|+|++|++++|+++.+|+ +++++++.+++. ++.+++|++ .+++++.+.
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~-~~~~~~g~~-~v~~~~~~~ 232 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERL-DLAESIGAI-PIDFSDGDP 232 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCe-EeccCcccH
Confidence 77888899999999 45568999999999889999999999999998 687766665554 666789984 456655433
Q ss_pred ---HHHHc-CCccEEEEccCCcc-----------cHHHHHHhhccCCEEEEEcCC
Q 021300 241 ---MQAAM-GTMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 241 ---~~~~~-~~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+.++. +++|+++|++|... ++..++++++++|+++.+|..
T Consensus 233 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~ 287 (375)
T cd08282 233 VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVY 287 (375)
T ss_pred HHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEecc
Confidence 33333 36999999998763 378899999999999988864
No 68
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.7e-33 Score=255.56 Aligned_cols=266 Identities=22% Similarity=0.315 Sum_probs=216.9
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++.. ++.+++++++.|+++++||+|||.++++|+.|.....+.++ .|.++|+|++|+|+++|++ +++
T Consensus 1 ~~a~~~~~---~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDG---GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeC---CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence 56777754 34588999999999999999999999999999988877553 5788999999999999988 679
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCC-ccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
||+|...+.. +|++|.+|.+|.+++|.+.... +. ...|++++|+.++.++++++|+++++++++.+ ....
T Consensus 72 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~ 142 (319)
T cd08242 72 GKRVVGEINI-ACGRCEYCRRGLYTHCPNRTVL-------GIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLA 142 (319)
T ss_pred CCeEEECCCc-CCCCChhhhCcCcccCCCCccc-------CccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHH
Confidence 9999766555 7999999999999999875321 11 24689999999999999999999999888753 3445
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d 249 (314)
++|.++ ...++++|+++||+|+|.+|++++|+|+.+|++++++++++++.+.+ +++|++.+++++.. ...+++|
T Consensus 143 ~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d 216 (319)
T cd08242 143 AALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFD 216 (319)
T ss_pred HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCC
Confidence 666655 44558999999999889999999999999999998888887777555 56999887776542 1124699
Q ss_pred EEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+++|++|+...+..++++++++|+++..+.......++...+..++.++.+
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVG 267 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEE
Confidence 999999886668899999999999999877665666777666667777653
No 69
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.3e-33 Score=256.43 Aligned_cols=252 Identities=24% Similarity=0.340 Sum_probs=211.8
Q ss_pred ccchhhhccCCC-CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 021300 11 KNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
||++++..++++ +.+++.+++.|.+.++||+|||.++++|+.|+..+.|.++ .+..|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 677777665443 4578899999999999999999999999999998877654 24568899999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 168 (314)
++||+|+.. ...|+|++|+.++...++++|+++++++++.+++..
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 999999742 136899999999999999999999999999998889
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA 244 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~ 244 (314)
.++|+++.. ..+++|++|||+|+ |.+|++++|+|+.+|++++++++++++++.+. ++|++.++++++.+. +.+.
T Consensus 126 ~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~i~~~ 203 (324)
T cd08292 126 LSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQPGWQDKVREA 203 (324)
T ss_pred HHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCchHHHHHHHH
Confidence 999999865 56899999999987 99999999999999999999999988876664 589999888876543 3444
Q ss_pred cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEee
Q 021300 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~ 300 (314)
+. ++|++||++|+. ....++++++++|+++.+|... ....++....+.++.++.+
T Consensus 204 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 261 (324)
T cd08292 204 AGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRG 261 (324)
T ss_pred hCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEE
Confidence 43 699999999987 4889999999999999999753 2345565556667777763
No 70
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3e-33 Score=255.97 Aligned_cols=271 Identities=25% Similarity=0.391 Sum_probs=216.4
Q ss_pred CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHh-cCCC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (314)
Q Consensus 22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 98 (314)
++.+++++.+.|+++++||+|||.++++|++|..... +.++ ....|.++|+|++|+|+++|++++.|++||+|++.+
T Consensus 6 ~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~ 85 (339)
T cd08232 6 AGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNP 85 (339)
T ss_pred CCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEcc
Confidence 4568889999999999999999999999999987763 3221 124577899999999999999999999999997664
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (314)
Q Consensus 99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 178 (314)
. ++|++|.+|..|..+.|.++.+. +....-....|+|++|+.++.+.++++|+++++++++. ..++.++|+++...
T Consensus 86 ~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~ 161 (339)
T cd08232 86 S-RPCGTCDYCRAGRPNLCLNMRFL--GSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA 161 (339)
T ss_pred C-CcCCCChHHhCcCcccCccccce--eeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc
Confidence 4 48999999999999999986321 11000012479999999999999999999999998865 57788999999877
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH---cCCccEEEEc
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDT 254 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~---~~~~d~v~d~ 254 (314)
..+ +|++|||.|+|.+|.+++|+|+.+|+ +++++++++++.. +++++|++.++++++.+ +... .+++|+++|+
T Consensus 162 ~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~ 238 (339)
T cd08232 162 GDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA-VARAMGADETVNLARDP-LAAYAADKGDFDVVFEA 238 (339)
T ss_pred CCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHcCCCEEEcCCchh-hhhhhccCCCccEEEEC
Confidence 765 99999998889999999999999999 7777777766554 67889999988887654 2222 2359999999
Q ss_pred cCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
+|....+...++.|+++|+++.+|..+.+..++...++.+.+++.
T Consensus 239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 283 (339)
T cd08232 239 SGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLR 283 (339)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEE
Confidence 997555889999999999999998655444444555555666654
No 71
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.2e-33 Score=257.05 Aligned_cols=266 Identities=25% Similarity=0.306 Sum_probs=210.0
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-----------CCCCCCcccccccEEEE
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-----------NTIYPIVPGHEIVGVVT 79 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-----------~~~~p~~~G~e~~G~V~ 79 (314)
||++++..+ .+++++++.|++.++||+|||.++++|+.|++.+.|... ...+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 577776542 588899999999999999999999999999988876221 22457899999999999
Q ss_pred EeCCCCCC-CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCc
Q 021300 80 EVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158 (314)
Q Consensus 80 ~vG~~v~~-~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~ 158 (314)
++|+++++ |++||+|+..+. ..|+.|..|..|.. ....|+|++|+.++.+.++++|+++++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~ 138 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSM 138 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCH
Confidence 99999997 999999987655 48999999943211 124689999999999999999999999
Q ss_pred ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH
Q 021300 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238 (314)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~ 238 (314)
++++ ++..+.+||+++ ....+++|++|||+|+|.+|.+++|+++.+|++++++++..++..++++++|++.+++++..
T Consensus 139 ~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~ 216 (341)
T cd08262 139 EDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAAD 216 (341)
T ss_pred HHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCc
Confidence 8876 667888999986 45668999999999889999999999999999866656555555567788999888887654
Q ss_pred HH------HHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 239 DE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 239 ~~------~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+. +.... +++|+++|++|+...+..++++++++|+++.+|.......+.......+++.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 286 (341)
T cd08262 217 SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQF 286 (341)
T ss_pred CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEE
Confidence 21 12222 3699999999875457889999999999999997654333333333456666653
No 72
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3e-33 Score=256.60 Aligned_cols=277 Identities=23% Similarity=0.292 Sum_probs=220.0
Q ss_pred ccchhhhccCCCCccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++.+.. ++.+++.+.+.|.| +++||+||+.++++|++|+..+.|.++ ...|.++|||++|+|+++|+++..++
T Consensus 1 m~~~~~~~---~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHG---PGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEec---CCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccC
Confidence 56777753 44588999999996 899999999999999999988877654 34578999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCCCCCccccc-----
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATA----- 162 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa----- 162 (314)
+||+|++. ....|+.|..|..|..+.|.+..+. +....|+|++|+.++.. .++++|++++++.+.
T Consensus 77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~ 148 (345)
T cd08287 77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL 148 (345)
T ss_pred CCCEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence 99999753 4457999999999999999864321 23467999999999874 999999999873221
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-- 240 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-- 240 (314)
.+...+.+||+++. ...+++|++++|.|+|.+|++++|+|+..|+++++++.+.+.+.++.+++|++.++++...+.
T Consensus 149 ~l~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~ 227 (345)
T cd08287 149 ALSDVMGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVA 227 (345)
T ss_pred hhhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHH
Confidence 22356788999886 445899999999888999999999999999974444444444557778899999998876543
Q ss_pred -HHHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEee
Q 021300 241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 241 -~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~ 300 (314)
+.+..+ ++|+++|++|+...+..+++.++++|+++.+|.+..+..++....+.++.++..
T Consensus 228 ~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 228 RVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAG 290 (345)
T ss_pred HHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEE
Confidence 334433 699999999876678999999999999999997765556666455667777653
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=3.9e-33 Score=253.91 Aligned_cols=275 Identities=29% Similarity=0.428 Sum_probs=224.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++.. .+..+.++++|.|.+.+++|+|||.++++|+.|+....+.++....|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~--~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHK--PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEec--CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 56677654 3445788899999999999999999999999999988887665567889999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+.. +|+.|.+|..+.++.|++. ..+ +....|++++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 150 (332)
T cd08259 79 GDRVILYYYI-PCGKCEYCLSGEENLCRNR--AEY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT 150 (332)
T ss_pred CCEEEECCCC-CCcCChhhhCCCcccCCCc--ccc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence 9999876544 7999999999999999874 211 2345789999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHHcCCc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTM 248 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~~~~~ 248 (314)
||++++. ..+.+++++||+|+ |++|++++++++..|++++++++++++.+.+ ++++.+.+++..+. +.+.+. .++
T Consensus 151 a~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ 227 (332)
T cd08259 151 AVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGA 227 (332)
T ss_pred HHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCC
Confidence 9999987 66899999999997 9999999999999999999999887776555 67888777765431 222222 279
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS 299 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~ 299 (314)
|++++++|... ...++++++++|+++.+|..... ..++......++..+.
T Consensus 228 d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 278 (332)
T cd08259 228 DVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRII 278 (332)
T ss_pred CEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEE
Confidence 99999999875 88999999999999999875432 2233333334555544
No 74
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.4e-33 Score=255.97 Aligned_cols=275 Identities=25% Similarity=0.373 Sum_probs=225.2
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++.+... +.+.+++.+.|++.+++|+|||.++++|+.|+..+.+.++....|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGP---NDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecC---CceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 566666543 34788899999999999999999999999999988776543345789999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc-----eEECCCCCCcccccccc
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-----VVRIPEGTPLDATAPLL 165 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa~~~ 165 (314)
||+|+..+. .+|++|..|..|..++|+...+. +....|+|++|+.++... ++++|+++++++++.+
T Consensus 78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~- 148 (343)
T cd08235 78 GDRVFVAPH-VPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV- 148 (343)
T ss_pred CCEEEEccC-CCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-
Confidence 999987654 47889999999999999875432 234579999999999988 9999999999998765
Q ss_pred hhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---H
Q 021300 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---M 241 (314)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~ 241 (314)
..+.+||+++... .+++|++|+|+|+|.+|++++++|+..|++ ++++++++++...+ +++|.+.++++++++. +
T Consensus 149 ~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i 226 (343)
T cd08235 149 EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKV 226 (343)
T ss_pred hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHH
Confidence 7888999999765 689999999998899999999999999998 87777777777555 6789999888877543 3
Q ss_pred HHHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300 242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 242 ~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~ 299 (314)
.+... ++|+++|++++...+..++++++++|+++.+|.... ...++......++..+.
T Consensus 227 ~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (343)
T cd08235 227 RELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITIT 288 (343)
T ss_pred HHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEE
Confidence 33333 599999999976568899999999999999987543 24455555566666664
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=4.2e-33 Score=254.12 Aligned_cols=279 Identities=24% Similarity=0.327 Sum_probs=227.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++.+...+.+..+++.+.+.|.+.+++|+||+.++++|++|+..+.|.... ..+|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 56777765455667888888888899999999999999999999888775542 35678999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|++.+.. +|++|.+|.++.+|.|+...+ . |....|++++|+.++.+.++++|+.+++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 81 PGQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI--L-----GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCEEEEcccc-ccccchhhccccccccccccc--c-----ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 99999876554 799999999999999987422 1 234578999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH---HHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ---AAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~---~~~ 245 (314)
++|+++.....++++++++|+|+ +.+|++++++++..|++++++++++++...+ +.++.+.+++..+.+... +..
T Consensus 153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (342)
T cd08266 153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELT 231 (342)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHh
Confidence 99999877677899999999998 7999999999999999999998888777555 667887777766644322 222
Q ss_pred --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
+++|++++++|... +...++.++++|+++.+|.... ...++....+.++..+.
T Consensus 232 ~~~~~d~~i~~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
T cd08266 232 GKRGVDVVVEHVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSIL 287 (342)
T ss_pred CCCCCcEEEECCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEE
Confidence 36999999999864 8899999999999999987653 23444434455555554
No 76
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=7.8e-33 Score=253.67 Aligned_cols=274 Identities=26% Similarity=0.419 Sum_probs=223.0
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++... +.+++++.+.|+++++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~---~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGP---GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecC---CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCC
Confidence 577777654 2478888999999999999999999999999988777553 345788999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+.. .|++|.+|..|.++.|+...+. +....|+|++|+.++.+.++++|+++++++++.+ ....+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 147 (343)
T cd08236 77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV 147 (343)
T ss_pred CCEEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence 9999765444 7999999999999999885321 2346789999999999999999999999998877 56789
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHHHcC-
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG- 246 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~~~~- 246 (314)
||+++. ...+++|++|+|+|+|.+|.+++|+|+.+|++ ++++++++++...+ +++|++.++++++.. .+....+
T Consensus 148 a~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T cd08236 148 ALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEG 225 (343)
T ss_pred HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCC
Confidence 999987 45589999999998899999999999999997 88888887766544 789998888876543 3333333
Q ss_pred -CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCccc---chhhhhcCceeEe
Q 021300 247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL---PAFSLLMGEEEDS 299 (314)
Q Consensus 247 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~---~~~~~~~~~~~i~ 299 (314)
++|+++|++|....+..++++|+++|+++.+|....+..+ +...++.++.++.
T Consensus 226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (343)
T cd08236 226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQ 282 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEE
Confidence 5999999998766689999999999999999976543222 3334456666665
No 77
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.2e-33 Score=255.65 Aligned_cols=222 Identities=17% Similarity=0.134 Sum_probs=182.9
Q ss_pred CCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300 21 TSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (314)
Q Consensus 21 ~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 96 (314)
.++.+++.+++.|+|. ++||||||.++|||+.|...+.... ....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus 19 ~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 98 (345)
T cd08293 19 VAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS 98 (345)
T ss_pred CccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence 3567888899999875 9999999999999999864332111 11356789999999999999999999999999963
Q ss_pred cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCccc----ccccchhhhhhh
Q 021300 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA----TAPLLCAGITVY 172 (314)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~ 172 (314)
..++|+||+.++++.++++|+++++.+ ++.++.++.|||
T Consensus 99 -------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~ 141 (345)
T cd08293 99 -------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTAL 141 (345)
T ss_pred -------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHH
Confidence 114699999999999999999865433 446777899999
Q ss_pred hhhHhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300 173 SPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (314)
Q Consensus 173 ~~l~~~~~~~~g--~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~ 245 (314)
+++.....+++| ++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+.+++|++.++++.+.+ .+.++.
T Consensus 142 ~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~ 221 (345)
T cd08293 142 IGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELC 221 (345)
T ss_pred HHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHC
Confidence 999777767876 99999997 9999999999999999 7999988888776666669999999887643 344444
Q ss_pred -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+++|++||++|+.. +..++++|+++|+++.+|..
T Consensus 222 ~~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 222 PEGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CCCceEEEECCCcHH-HHHHHHHhccCCEEEEEeee
Confidence 37999999999875 79999999999999999853
No 78
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=9.5e-33 Score=252.79 Aligned_cols=250 Identities=21% Similarity=0.190 Sum_probs=199.1
Q ss_pred ccchhhhccCCCCccceeeeee----cCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccc--cEEEEEeCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSR----RATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEI--VGVVTEVGS 83 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~----p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~ 83 (314)
++++.... ++++.|++.+.+. |+|++|||||||++++||+.|++.+.|.... ...|+++|++. .|++..+|+
T Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGF-PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCC-CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 45555444 3466788888877 8999999999999999999999988775432 25678899754 566666889
Q ss_pred CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC-CceEECC-CCCCcc-c
Q 021300 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIP-EGTPLD-A 160 (314)
Q Consensus 84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p-~~~~~~-~ 160 (314)
++++|++||+|+. .|+|+||++++. ..++++| +.++++ +
T Consensus 87 ~v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~ 128 (338)
T cd08295 87 GNPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYY 128 (338)
T ss_pred CCCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHH
Confidence 9999999999962 268999999999 7999995 678876 7
Q ss_pred ccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-H
Q 021300 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q 238 (314)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~ 238 (314)
++++++++.|||+++.....+++|++|||+|+ |++|++++|+|+.+|++++++++++++.+.+.+++|++.++++.+ .
T Consensus 129 aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~ 208 (338)
T cd08295 129 LGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP 208 (338)
T ss_pred HHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcc
Confidence 88899999999999977777899999999997 999999999999999999988888877755544499999888643 2
Q ss_pred H---HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEee
Q 021300 239 D---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDSW 300 (314)
Q Consensus 239 ~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~~ 300 (314)
+ .+.+.. +++|++||++|+. .+..++++++++|+++.+|..++. . .++...+..+++++.+
T Consensus 209 ~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g 279 (338)
T cd08295 209 DLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQG 279 (338)
T ss_pred cHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeE
Confidence 2 333333 3799999999985 589999999999999999975432 1 1344556667777663
No 79
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.9e-32 Score=250.23 Aligned_cols=252 Identities=19% Similarity=0.277 Sum_probs=204.9
Q ss_pred cchhhhcc---CCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 021300 12 NAFGWAAK---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 12 ~~~~~~~~---~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
|++.+... ++++.++..++|.|+|+++||+|||+++++|+.|..++.+..+...+|.++|+|++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 35556664 667888899999999999999999999999999998887765545678899999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 168 (314)
++||+|+... .....|+|++|+.++.+.++++|+++++++++.+++..
T Consensus 81 ~~Gd~V~~~~--------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~ 128 (336)
T TIGR02817 81 KPGDEVWYAG--------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTS 128 (336)
T ss_pred CCCCEEEEcC--------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHH
Confidence 9999997311 01236899999999999999999999999999999999
Q ss_pred hhhhhhhHhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--H
Q 021300 169 ITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--D 239 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~ 239 (314)
.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |++++++++++++.+.+ +++|++.++++... .
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~ 207 (336)
T TIGR02817 129 ITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKA 207 (336)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHH
Confidence 999999977666776 999999987 99999999999998 99999998888777555 78999998875441 2
Q ss_pred HHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 240 EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 240 ~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.+++.. +++|+++|++++...+...+++++++|+++.++.. ..++...+..++..+.
T Consensus 208 ~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 208 QLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLH 265 (336)
T ss_pred HHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEE
Confidence 333333 36999999987655689999999999999998532 2344444444444443
No 80
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-32 Score=250.75 Aligned_cols=269 Identities=23% Similarity=0.292 Sum_probs=211.0
Q ss_pred ccchhhhccCCCCccceee-eeecCCCCCeEEEEEeeeccChhhhhhHhcCCC--------------------CCCCCCc
Q 021300 11 KNAFGWAAKDTSGVLSPFH-FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------------------NTIYPIV 69 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~--------------------~~~~p~~ 69 (314)
||++.+...+.+..+++.+ .+.|.+.+++|+|||.++++|++|+.+..|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 5677776555455555543 477788999999999999999999988776542 2356889
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCce
Q 021300 70 PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149 (314)
Q Consensus 70 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~ 149 (314)
+|||++|+|+++|+++++|++||+|++.+.. +|+.|..|.. |.. .+....|++++|+.++...+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~----------~~~~~~g~~~~~~~v~~~~~ 144 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDY----------IGSERDGGFAEYTVVPAENA 144 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCc-CCCCcccccc-----ccc----------cCCCCCccceEEEEecHHHc
Confidence 9999999999999999999999999765444 5776665421 110 11224689999999999999
Q ss_pred EECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (314)
Q Consensus 150 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g 228 (314)
+++|+++++++++.+++.+.|||+++. ...+++|+++||+|+ |++|++++++++.+|+++++++++. ++ +.++++|
T Consensus 145 ~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~-~~~~~~g 221 (350)
T cd08274 145 YPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KE-EAVRALG 221 (350)
T ss_pred eeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hh-HHHHhcC
Confidence 999999999999999999999999984 455899999999998 9999999999999999998887664 55 4457899
Q ss_pred CcEEecCCCHHHH-HHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300 229 ADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS 299 (314)
Q Consensus 229 a~~~v~~~~~~~~-~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~ 299 (314)
++.+++....... .+.. .++|++||++|+. .+..++++++++|+++.+|....+ ..++...++.++.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 295 (350)
T cd08274 222 ADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLF 295 (350)
T ss_pred CeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEE
Confidence 9766555443221 2222 3699999999986 489999999999999999976544 5677777677777765
No 81
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.9e-32 Score=249.87 Aligned_cols=275 Identities=21% Similarity=0.329 Sum_probs=215.3
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
||++.+...+ ..+++.+.+.|+|.++|++|||.++++|+.|...+.+.. +...+|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAG--PGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCC--CceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 5666666533 258889999999999999999999999999988754421 12245678999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
+++||+|+..+.+ +|+.|.+|..+++|+|+... +.+ ....|+|++|+.++.+.++++|++++.+.+ .++..
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~ 149 (341)
T cd05281 79 VKVGDYVSAETHI-VCGKCYQCRTGNYHVCQNTK--ILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEP 149 (341)
T ss_pred CCCCCEEEECCcc-CCCCChHHHCcCcccCcccc--eEe-----ccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhH
Confidence 9999999876444 99999999999999997642 222 235689999999999999999999988544 56777
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHH--HHHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAA 244 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~--~~~~ 244 (314)
+.++++++. ...++|++|||.|+|.+|++++++++.+|+ +++++.+++ ++..+.+++|++.+++++..+. +.+.
T Consensus 150 ~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (341)
T cd05281 150 LGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNP-YRLELAKKMGADVVINPREEDVVEVKSV 226 (341)
T ss_pred HHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH-HHHHHHHHhCcceeeCcccccHHHHHHH
Confidence 788888775 235899999998889999999999999999 677775554 4446777899988887655433 3333
Q ss_pred cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchh-hhhcCceeEe
Q 021300 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGEEEDS 299 (314)
Q Consensus 245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~-~~~~~~~~i~ 299 (314)
.+ ++|++||++|.......++++|+++|+++.+|..+....++.. .+..++..+.
T Consensus 227 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 284 (341)
T cd05281 227 TDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQ 284 (341)
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEE
Confidence 33 6999999998766688999999999999999876544444332 3555666554
No 82
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-32 Score=250.93 Aligned_cols=251 Identities=19% Similarity=0.172 Sum_probs=196.5
Q ss_pred ccchhhhccC----CCCccceeee---eec-CCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccc--cccEEEEE
Q 021300 11 KNAFGWAAKD----TSGVLSPFHF---SRR-ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH--EIVGVVTE 80 (314)
Q Consensus 11 ~~~~~~~~~~----~~~~~~~~~~---~~p-~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~--e~~G~V~~ 80 (314)
.|.+.+.... .+..|++++. +.| ++++|||||||.++++|+.|...+.+.......|+++|+ |++|+|..
T Consensus 9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~ 88 (348)
T PLN03154 9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV 88 (348)
T ss_pred ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence 4555554432 3456777663 555 347999999999999999987654332222245889998 88999999
Q ss_pred eCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc--eE--ECCCCC
Q 021300 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VV--RIPEGT 156 (314)
Q Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~--~~p~~~ 156 (314)
+|+++++|++||+|+ ..|+|+||+.++... ++ ++|+++
T Consensus 89 vg~~v~~~~~Gd~V~--------------------------------------~~~~~aey~~v~~~~~~~~~~~~P~~~ 130 (348)
T PLN03154 89 VDSDDPNFKPGDLIS--------------------------------------GITGWEEYSLIRSSDNQLRKIQLQDDI 130 (348)
T ss_pred EecCCCCCCCCCEEE--------------------------------------ecCCcEEEEEEeccccceEEccCcCCC
Confidence 999999999999996 236799999998753 54 459999
Q ss_pred Ccc-cccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEec
Q 021300 157 PLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234 (314)
Q Consensus 157 ~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~ 234 (314)
+++ +++.++++..|||+++.....+++|++|||+|+ |++|++++|+||.+|++++++++++++.+.+.+++|++.+++
T Consensus 131 ~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~ 210 (348)
T PLN03154 131 PLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFN 210 (348)
T ss_pred CHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence 986 677899999999999977777899999999998 999999999999999999888888877755544799999998
Q ss_pred CCCH-H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEee
Q 021300 235 SRDQ-D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDSW 300 (314)
Q Consensus 235 ~~~~-~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~~ 300 (314)
+++. + .+.+..+ ++|++||++|+. .+..++++++++|+++.+|..++. . .++...++.+++++.+
T Consensus 211 ~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g 286 (348)
T PLN03154 211 YKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG 286 (348)
T ss_pred CCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence 7642 2 3333333 799999999986 589999999999999999976432 2 1355667778888763
No 83
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.4e-32 Score=247.07 Aligned_cols=274 Identities=28% Similarity=0.439 Sum_probs=222.1
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++..+ +.+++.+++.|++.++||+|||.++++|+.|.....|.++. .+|.++|+|++|+|+++|++++++++
T Consensus 1 ~~a~~~~~~---~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGP---GELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCC---CceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence 567776543 35888999999999999999999999999999988876653 47889999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+.. .|++|.+|..+..+.|+...+. +....|++++|+.++.+.++++|+++++.+++.+ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~ 147 (334)
T cd08234 77 GDRVAVDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSC 147 (334)
T ss_pred CCEEEEcCCc-CCCCCccccCcChhhCCCccee-------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHH
Confidence 9999876655 5999999999999999876421 2235689999999999999999999999988765 67788
Q ss_pred hhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHHH--HHHc-C
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEM--QAAM-G 246 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~--~~~~-~ 246 (314)
+++++ ...++++|+++||+|+|.+|.+++++|+..|++ ++++++++++...+ +++|++.+++.+..+.. .... +
T Consensus 148 a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (334)
T cd08234 148 AVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPY 225 (334)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCC
Confidence 89888 556689999999998899999999999999997 77777777766555 78898888877654322 2222 3
Q ss_pred CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC--CcccchhhhhcCceeEe
Q 021300 247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 247 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~--~~~~~~~~~~~~~~~i~ 299 (314)
++|+++|++|.......++++|+++|+++.+|.... ...++...+..+++.+.
T Consensus 226 ~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (334)
T cd08234 226 GFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTII 280 (334)
T ss_pred CCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEE
Confidence 699999999876668899999999999999987643 34455555444555554
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.2e-32 Score=247.94 Aligned_cols=237 Identities=20% Similarity=0.189 Sum_probs=191.1
Q ss_pred hccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 021300 17 AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (314)
Q Consensus 17 ~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 96 (314)
..++.++.+++.+.+.|+|++|||||||.++++|+.+. .|.+.....|.++|.|++|+|+++|+ .|++||||+.
T Consensus 11 ~~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~ 84 (325)
T TIGR02825 11 VGYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA 84 (325)
T ss_pred CCCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE
Confidence 44466788889999999999999999999999999654 33333334578999999999999874 5999999972
Q ss_pred cccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEEC----CCCCCcccc-cccchhhhhh
Q 021300 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI----PEGTPLDAT-APLLCAGITV 171 (314)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta 171 (314)
.++|++|+.++...+.++ |++++++++ +++++++.||
T Consensus 85 --------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA 126 (325)
T TIGR02825 85 --------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTA 126 (325)
T ss_pred --------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHH
Confidence 136899999999888777 899999987 6789999999
Q ss_pred hhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-H---HHHHHc-
Q 021300 172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAM- 245 (314)
Q Consensus 172 ~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~---~~~~~~- 245 (314)
|+++.....+++|++|||+|+ |++|++++|+|+..|++++++++++++.+.+ +++|++.++++++. + .+....
T Consensus 127 ~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~ 205 (325)
T TIGR02825 127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASP 205 (325)
T ss_pred HHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCC
Confidence 999877777899999999996 9999999999999999999988888776555 78999999988753 2 233333
Q ss_pred CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-----Ccc--cchhhhhcCceeEe
Q 021300 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-----PLE--LPAFSLLMGEEEDS 299 (314)
Q Consensus 246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~--~~~~~~~~~~~~i~ 299 (314)
+++|++||++|+.. +..++++++++|+++.+|.... +.. .....++.+++++.
T Consensus 206 ~gvdvv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (325)
T TIGR02825 206 DGYDCYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME 265 (325)
T ss_pred CCeEEEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEe
Confidence 36999999999875 7999999999999999997532 111 12334555666665
No 85
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.6e-31 Score=244.86 Aligned_cols=265 Identities=22% Similarity=0.293 Sum_probs=210.5
Q ss_pred CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 021300 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (314)
Q Consensus 23 ~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 99 (314)
..+++++++.|.|+++||+|||.++++|+.|+..+.+.. ....+|.++|+|++|+|+++|+++++|++||+|+..+.
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence 347888999999999999999999999999988765431 12245778999999999999999999999999976544
Q ss_pred ccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcC
Q 021300 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179 (314)
Q Consensus 100 ~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~ 179 (314)
. .|+.|..|..+..+.|++..+. +....|+|++|+.++.+.++++|++++++++ +++..+.++++++. .
T Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~--~ 157 (340)
T TIGR00692 89 I-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL--A 157 (340)
T ss_pred C-CCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH--c
Confidence 4 8999999999999999986432 1225689999999999999999999998654 56778888888762 3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc--CCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM--GTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~--~~~d~v~d 253 (314)
..++|++++|.|+|++|.+++|+++.+|++ ++++.++ +++.++.+++|++.++++...+. +.+.. +++|+++|
T Consensus 158 ~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld 236 (340)
T TIGR00692 158 GPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPN-EYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE 236 (340)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC-HHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence 368999999988899999999999999997 6666444 45556668899988887765433 33333 36999999
Q ss_pred ccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchh-hhhcCceeEe
Q 021300 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGEEEDS 299 (314)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~-~~~~~~~~i~ 299 (314)
++|....+...+++|+++|+++.+|.......++.. .++.+...+.
T Consensus 237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 283 (340)
T TIGR00692 237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIY 283 (340)
T ss_pred CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEE
Confidence 998766688999999999999999976443344333 4555666654
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.3e-31 Score=245.30 Aligned_cols=253 Identities=24% Similarity=0.298 Sum_probs=208.5
Q ss_pred ccchhhhccCCC-CccceeeeeecCCCC-CeEEEEEeeeccChhhhhhHhcCCCCC-C----CCCcccccccEEEEEeCC
Q 021300 11 KNAFGWAAKDTS-GVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHMIKNEWGNT-I----YPIVPGHEIVGVVTEVGS 83 (314)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~-~eVlVkv~a~~l~~~d~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~ 83 (314)
||++.+...+.+ +.+++++.|.|+|.+ +||+||+.++++|+.|...+.+..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 778888765443 357888999999888 999999999999999999887765422 2 677999999999999999
Q ss_pred CCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccc
Q 021300 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (314)
Q Consensus 84 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~ 163 (314)
++..|++||+|+... ...|+|++|+.++...++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 999999999997421 1258999999999999999999999999999
Q ss_pred cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh----hhHHHHHHHcCCcEEecCCCH
Q 021300 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAIERLGADSFLVSRDQ 238 (314)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~----~~~~~~~~~~ga~~~v~~~~~ 238 (314)
+++.+.|+|+++.....+++|++|||+|+ |++|++++++|+..|+++++++++. ++. +.++++|++.+++++..
T Consensus 127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 205 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELK-ERLKALGADHVLTEEEL 205 (341)
T ss_pred hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHH-HHHHhcCCCEEEeCccc
Confidence 99999999999987777899999999987 9999999999999999999888876 334 44478999998877653
Q ss_pred ---H---HHHHHcC-CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 239 ---D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 239 ---~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
+ .+....+ ++|++||++|+.. +..++++++++|+++.+|.... +..++....+.++.++.
T Consensus 206 ~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 273 (341)
T cd08290 206 RSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLR 273 (341)
T ss_pred ccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEE
Confidence 2 2333333 6999999999875 7789999999999999986542 34566656666777766
No 87
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3.1e-31 Score=234.00 Aligned_cols=249 Identities=34% Similarity=0.508 Sum_probs=207.9
Q ss_pred eEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCC
Q 021300 39 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117 (314)
Q Consensus 39 eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c 117 (314)
||+|||.++++|+.|+..+.+..+ ....|.++|+|++|+|+++|++++.|++||+|+..+.. .|+.|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence 689999999999999998887664 34567899999999999999999999999999876554 8999999997 67
Q ss_pred CccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHH
Q 021300 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197 (314)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~ 197 (314)
+...+. +....|++++|+.++.+.++++|+++++++++.++..+.+||+++.....+++|+++||+|+|++|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 665432 3446799999999999999999999999999999999999999998888779999999999866999
Q ss_pred HHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH----cCCccEEEEccCCcccHHHHHHhhccCCE
Q 021300 198 VAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGK 273 (314)
Q Consensus 198 ~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 273 (314)
+++++++..|.+++++++++++.+.+ +++|++.+++..+.+....+ .+++|+++++++.......++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 99999999999999998887776554 77888888877665433322 24799999999984458999999999999
Q ss_pred EEEEcCCCCCcccc-hhhhhcCceeEee
Q 021300 274 LVLVGAPEKPLELP-AFSLLMGEEEDSW 300 (314)
Q Consensus 274 ~v~~G~~~~~~~~~-~~~~~~~~~~i~~ 300 (314)
++.+|......... ....+.+++++.+
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIG 255 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEE
Confidence 99999876433332 4556777888763
No 88
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.5e-31 Score=243.51 Aligned_cols=245 Identities=19% Similarity=0.159 Sum_probs=194.2
Q ss_pred cccchhhhcc--CCC--CccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 021300 10 PKNAFGWAAK--DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV 85 (314)
Q Consensus 10 ~~~~~~~~~~--~~~--~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 85 (314)
.|+++.+... +++ ..+++++.+.|+|+++||||||++++||+.|..... ....+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence 4788888772 343 778899999999999999999999999988754221 1124688999999999995 45
Q ss_pred CCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC---ceEECCCCCC--c--
Q 021300 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH---FVVRIPEGTP--L-- 158 (314)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~~p~~~~--~-- 158 (314)
+.|++||||+. .++|++|+.++.. .++++|++++ +
T Consensus 76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~ 117 (329)
T cd08294 76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP 117 (329)
T ss_pred CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence 67999999962 2468999999999 9999999998 2
Q ss_pred -ccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC
Q 021300 159 -DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (314)
Q Consensus 159 -~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~ 236 (314)
..++.+++++.|||+++....++++|+++||+|+ |++|++++|+|+.+|++++++++++++.+.+ +++|++.+++++
T Consensus 118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~ 196 (329)
T cd08294 118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYK 196 (329)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCC
Confidence 2224678899999999977777899999999986 9999999999999999999888888776444 679999999987
Q ss_pred CHHHH---HHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC---C----cccchhhhhcCceeEee
Q 021300 237 DQDEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---P----LELPAFSLLMGEEEDSW 300 (314)
Q Consensus 237 ~~~~~---~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~---~----~~~~~~~~~~~~~~i~~ 300 (314)
+.+.. .+.. +++|++||++|+. .+..++++++++|+++.+|.... + .......++.+++++.+
T Consensus 197 ~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (329)
T cd08294 197 TVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEG 270 (329)
T ss_pred CccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEE
Confidence 75443 3333 3799999999985 58999999999999999986422 1 12223445667777663
No 89
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.98 E-value=4.4e-31 Score=240.45 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=205.2
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
.|+++.+..++.+..+++++++.|.++++||+|||.++|+|++|+....+.++...+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 48889998888888899999999999999999999999999999988877665455788999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+... ...|+|++|+.++.+.++++|+++++++++.+++...
T Consensus 81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 999996311 1348899999999999999999999999998889999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~ 245 (314)
++|.++.....+++|++++|+|+ |.+|++++++++.+|++++.++++++++..+ +++|++.+++.+..+ .+.+..
T Consensus 127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T PRK10754 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT 205 (327)
T ss_pred HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence 99999887777899999999976 9999999999999999999999888877555 789998888776543 333443
Q ss_pred C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
. ++|+++|++|+. .....++.++++|+++.+|....
T Consensus 206 ~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~ 243 (327)
T PRK10754 206 GGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASG 243 (327)
T ss_pred CCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCC
Confidence 3 699999999986 48889999999999999997653
No 90
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.98 E-value=2.6e-30 Score=234.74 Aligned_cols=256 Identities=23% Similarity=0.273 Sum_probs=206.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++..++++.++++++++.|.+.++||+|||.++++|++|+..+.|.++. ...|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 67888887666567899999999999999999999999999999888776542 235788999999999999 456799
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..+. ..+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 79 EGDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred CCCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 9999974210 01223468999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCC--C-CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH--HHHH
Q 021300 170 TVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA 243 (314)
Q Consensus 170 ta~~~l~~~~~~--~-~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~--~~~~ 243 (314)
++|.++....+. . .+++|+|+|+ |.+|++++++|+.+|++++++++++++++.+ +++|++.+++.++.+ ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHH
Confidence 999998665433 4 4579999998 9999999999999999999998888777555 789999988876542 2222
Q ss_pred Hc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 244 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
.. +++|+++|++|+. .+..++++++++|+++.+|.... +..++...+..++.++.
T Consensus 209 ~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 265 (325)
T cd05280 209 LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLL 265 (325)
T ss_pred hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEE
Confidence 22 3699999999986 58999999999999999997643 33455555555676665
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=3.3e-30 Score=234.88 Aligned_cols=273 Identities=26% Similarity=0.321 Sum_probs=220.0
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++...+....+++++.+.|.++++|++||+.++++|++|+....+.++. ...|.++|||++|+|+++|+.+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 67888876655667888888888899999999999999999999988776542 34678999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..... .| ..+.+..|... .++ +....|++++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-~~------~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFP-NW------LDGPPTAEDEA--SAL-----GGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEeccc-cc------ccccccccccc--ccc-----ccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999764432 33 33444444321 111 233578999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC-HH---HHHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD---EMQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~-~~---~~~~~~ 245 (314)
+||+++.....+++|++++|+|+|++|++++++++..|++++++++++++++.+ +++|++.+++.+. ++ .+.+..
T Consensus 147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (336)
T cd08276 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLT 225 (336)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHc
Confidence 999999877778999999999889999999999999999999999888877666 4589988888765 32 344444
Q ss_pred C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~ 299 (314)
+ ++|+++|+++.. .+..++++++++|+++.+|..... ..+....++.++.++.
T Consensus 226 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 281 (336)
T cd08276 226 GGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLR 281 (336)
T ss_pred CCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEE
Confidence 3 799999999866 488999999999999999976542 3455666677777776
No 92
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.98 E-value=1.7e-30 Score=236.27 Aligned_cols=257 Identities=22% Similarity=0.281 Sum_probs=205.2
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++.+...+++..+++++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 678888776666678889999999999999999999999999987654311 123568899999999999964 56799
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..+. ..+....|+|++|+.++.+.++++|+++++++++.+++...
T Consensus 79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSY-----------------------------DLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEccc-----------------------------ccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 9999975321 01223579999999999999999999999999999999999
Q ss_pred hhhhhhHhcCC---CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHH
Q 021300 170 TVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA 243 (314)
Q Consensus 170 ta~~~l~~~~~---~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~ 243 (314)
|||.++....+ ...+++|||+|+ |++|.+++++|+.+|++++++++++++.+.+ +++|++.+++.++. +.+.+
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHh
Confidence 99988754332 345789999998 9999999999999999999999998877555 78999888887654 22333
Q ss_pred Hc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300 244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 244 ~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~ 300 (314)
.. .++|+++|++|+. .+...+++++++|+++.+|..+. ..+++...++.+++.+..
T Consensus 209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 266 (326)
T cd08289 209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLG 266 (326)
T ss_pred hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEE
Confidence 33 3699999999985 58999999999999999997643 345455666667777763
No 93
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.98 E-value=2.7e-30 Score=234.51 Aligned_cols=253 Identities=26% Similarity=0.302 Sum_probs=206.6
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
||++.+...+.+..+++.+.+.|.+.++||+|||.++++|+.|+....|..+. ...|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 67777766555666777777778889999999999999999999888775432 355788999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
+++||+|+.... ...|+|++|+.++...++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 999999974210 13689999999999999999999999999999999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHH
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA 243 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~ 243 (314)
+.||| ++.....++++++++|+|+ |.+|.+++++|+.+|++++++++++++.+.+ +++|++.++++++.+. +.+
T Consensus 128 ~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 205 (324)
T cd08244 128 GRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVRE 205 (324)
T ss_pred HHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHH
Confidence 99995 4444566899999999996 9999999999999999999998888877655 7899988888776543 333
Q ss_pred HcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 244 ~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
..+ ++|+++|++|+.. ...++++++++|+++.+|.... +..++...++.++..+.
T Consensus 206 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08244 206 ALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVV 263 (324)
T ss_pred HcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEE
Confidence 333 6999999999875 7899999999999999997653 23455455566666665
No 94
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.98 E-value=3.3e-30 Score=234.73 Aligned_cols=232 Identities=26% Similarity=0.345 Sum_probs=200.4
Q ss_pred cccchhhhccCC--CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 021300 10 PKNAFGWAAKDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS 86 (314)
Q Consensus 10 ~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 86 (314)
.||++.+..+++ ++.+++++++.|.+.++||+|||.++++|+.|+....+.+.. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 388999988877 888999999999999999999999999999999988776542 46788999999999999999999
Q ss_pred CCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccch
Q 021300 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (314)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~ 166 (314)
++++||+|+. ...|+|++|+.++.+.++++|+. +.+++.+++
T Consensus 81 ~~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~ 122 (329)
T cd08250 81 DFKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLV 122 (329)
T ss_pred CCCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhccc
Confidence 9999999974 13589999999999999999987 356778999
Q ss_pred hhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HH
Q 021300 167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQ 242 (314)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~ 242 (314)
++.+||+++.....+++|++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+. +.
T Consensus 123 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~ 201 (329)
T cd08250 123 SGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLK 201 (329)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHH
Confidence 99999999987777899999999996 9999999999999999999999888777666 7799988887665432 22
Q ss_pred HHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 243 AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 243 ~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
... +++|++||++|+. .+..++++++++|+++.+|...
T Consensus 202 ~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 202 KEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred HhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEeccc
Confidence 222 3699999999975 5899999999999999998764
No 95
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.98 E-value=1.7e-30 Score=236.69 Aligned_cols=253 Identities=24% Similarity=0.292 Sum_probs=210.3
Q ss_pred cccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300 10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
+||++++...+....+++.+.+.|.+.++||+|||.++++|+.|.....+.++. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 489999887666666777788888899999999999999999998888775532 3456789999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 168 (314)
++||+|+.. ..+|++++|+.++.+.++++|+++++++++.+++.+
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 999999631 135899999999999999999999999999999999
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH-H---HHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-E---MQA 243 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~-~---~~~ 243 (314)
.+||+++.....+++|++++|+|+ |.+|++++++++..|++++++++++++.+.+ +++|++.+++....+ . +.+
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 204 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK 204 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence 999999987777899999999996 9999999999999999988888888777666 679998888876543 2 333
Q ss_pred Hc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccc-cchhhhhcCceeEe
Q 021300 244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLE-LPAFSLLMGEEEDS 299 (314)
Q Consensus 244 ~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~-~~~~~~~~~~~~i~ 299 (314)
.. .++|++||++++. .+..++++++++|+++.+|...+ ... ++...+..+...+.
T Consensus 205 ~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
T PTZ00354 205 LTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASII 263 (334)
T ss_pred HhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEE
Confidence 33 3699999999876 48899999999999999986543 222 66666666665665
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.98 E-value=4.1e-30 Score=233.59 Aligned_cols=256 Identities=24% Similarity=0.292 Sum_probs=206.6
Q ss_pred cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|++++...+.+..++++++|.|.+.++||+||+.++++|+.|+..+.|.++. ..+|.++|||++|+|+. .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 3455555566678899999999999999999999999999999888876542 25588999999999998 56678999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+. ..+....|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t 129 (323)
T TIGR02823 79 GDEVIVTGY-----------------------------GLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT 129 (323)
T ss_pred CCEEEEccC-----------------------------CCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence 999975320 001234689999999999999999999999999999999999
Q ss_pred hhhhhHhcCC--CCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHHc
Q 021300 171 VYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM 245 (314)
Q Consensus 171 a~~~l~~~~~--~~~g~-~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-~~~~~ 245 (314)
++.+++.... +.+|+ +++|+|+ |.+|.+++++|+.+|++++++++++++++.+ +++|++.+++.++.+. +....
T Consensus 130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 208 (323)
T TIGR02823 130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLE 208 (323)
T ss_pred HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhc
Confidence 9888754433 78898 9999998 9999999999999999999888888877555 7899988888766543 33333
Q ss_pred -CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300 246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 246 -~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~ 300 (314)
+++|.++|++|+. .+..++++++++|+++.+|.... +.+++...++.++.++.+
T Consensus 209 ~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T TIGR02823 209 KERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLG 264 (323)
T ss_pred CCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEE
Confidence 3699999999987 48999999999999999998643 344444555567777663
No 97
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=7.4e-30 Score=233.05 Aligned_cols=254 Identities=22% Similarity=0.277 Sum_probs=207.9
Q ss_pred ccchhhhccCCCC---ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSG---VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~---~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
|+++++...+.+. .++.++++.|++.+++|+||+.++++|+.|+..+.+.++..++|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 5778888766554 4677788889999999999999999999999887776554456789999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
|++||+|..... ....|+|++|+.++...++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 81 FKVGDEVYYAGD--------------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred CCCCCEEEEcCC--------------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 999999974210 124689999999999999999999999999999999
Q ss_pred hhhhhhhhHhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCC--H
Q 021300 168 GITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD--Q 238 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~ 238 (314)
+.++|.++.....+.+ |++++|+|+ |++|++++++++.+| ++++++++++++...+ +++|++.+++++. .
T Consensus 129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 207 (336)
T cd08252 129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLA 207 (336)
T ss_pred HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHH
Confidence 9999999876666776 999999986 999999999999999 8999998888777555 7899998888764 1
Q ss_pred HHHHHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 239 DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 239 ~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
..+.... +++|+++|++|+...+..++++++++|+++.+|... ..++...+..++..+.
T Consensus 208 ~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~ 267 (336)
T cd08252 208 EQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFH 267 (336)
T ss_pred HHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEE
Confidence 2333333 369999999997556899999999999999998753 3445555545666665
No 98
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=2.5e-30 Score=236.87 Aligned_cols=241 Identities=26% Similarity=0.327 Sum_probs=198.4
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+++++...+ +..+++++.+.|+|+++||+||+.++++|+.|+....+.+ ...+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 6778887654 6778999999999999999999999999999988765543 1235778999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+.. .|+ +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 79 GDRVAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CCEEEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 9999753311 000 1234789999999999999999999999999999999999
Q ss_pred hhhhhHhcCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 021300 171 VYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (314)
Q Consensus 171 a~~~l~~~~~~----------~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~ 239 (314)
||+++.....+ +++++++|+|+ |.+|++++++++.+|++++.++ ++++. +.++++|++.++++++.+
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~-~~~~~~g~~~v~~~~~~~ 209 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF-DLVKSLGADAVFDYHDPD 209 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH-HHHHhcCCCEEEECCCch
Confidence 99998765433 78999999997 9999999999999999998877 45555 444889999988887654
Q ss_pred H---HHHHc-CCccEEEEccCCcccHHHHHHhhcc--CCEEEEEcCCCC
Q 021300 240 E---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLVGAPEK 282 (314)
Q Consensus 240 ~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~G~~~~ 282 (314)
. +.+.. +++|+++|++|+...+..+++++++ +|+++.+|....
T Consensus 210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence 3 33333 3699999999984468999999999 999999987654
No 99
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=1.5e-29 Score=229.48 Aligned_cols=239 Identities=27% Similarity=0.340 Sum_probs=201.9
Q ss_pred ccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccC
Q 021300 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102 (314)
Q Consensus 24 ~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 102 (314)
.+++++.+.|++.+++|+|||+++++|+.|...+.+.+.. +..|.++|+|++|+|+++|++++.+++||+|+..+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 5777888899999999999999999999999887765532 35678999999999999999999999999997421
Q ss_pred CCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCC
Q 021300 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182 (314)
Q Consensus 103 c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 182 (314)
..|+|++|+.++...++++|+++++++++.+++...++|+++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1588999999999999999999999999989899999999988777789
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--CccEEEEccC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVS 256 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g 256 (314)
+|++++|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++|++.+++++..+. +.+... ++|+++|++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999987 9999999999999999999999988877555 7899999988876543 333333 6999999999
Q ss_pred CcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 257 AVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
+.. ....+++++++|+++.+|.... +..++...+..++.++.
T Consensus 217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 259 (323)
T cd05282 217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVR 259 (323)
T ss_pred CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEE
Confidence 875 7788999999999999987654 34556555554666665
No 100
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=9.3e-30 Score=229.23 Aligned_cols=242 Identities=23% Similarity=0.315 Sum_probs=198.7
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++...+ |..+++++.+.|.+.++||+||+.++++|+.|...... ...|.++|+|++|+|+++|+++..|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence 5677776543 66788889999999999999999999999999887542 223678999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+.. ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 76 Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t 120 (305)
T cd08270 76 GARVVGL-----------------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT 120 (305)
T ss_pred CCEEEEe-----------------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence 9999631 13689999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCcc
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d 249 (314)
||+++...... +|++++|+|+ |.+|.+++++++..|++++.+++++++...+ +++|++..++... + ...+++|
T Consensus 121 a~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~---~~~~~~d 194 (305)
T cd08270 121 ALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS-E---LSGAPVD 194 (305)
T ss_pred HHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc-c---ccCCCce
Confidence 99999877754 5999999998 9999999999999999999998887776555 6699876554322 1 1124799
Q ss_pred EEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-Ccccchhhhhc--CceeEe
Q 021300 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLM--GEEEDS 299 (314)
Q Consensus 250 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~--~~~~i~ 299 (314)
+++|++|+. .+..++++++++|+++.+|.... ...++...+.. ++..+.
T Consensus 195 ~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 246 (305)
T cd08270 195 LVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLY 246 (305)
T ss_pred EEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEE
Confidence 999999987 48999999999999999997643 34556655554 466655
No 101
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=6.7e-30 Score=234.69 Aligned_cols=235 Identities=26% Similarity=0.329 Sum_probs=196.6
Q ss_pred ccchhhhccCCCC-ccceeeeeecCC-CCCeEEEEEeeeccChhhhhhHhcCCC---------------CCCCCCccccc
Q 021300 11 KNAFGWAAKDTSG-VLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---------------NTIYPIVPGHE 73 (314)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~p~~-~~~eVlVkv~a~~l~~~d~~~~~~~~~---------------~~~~p~~~G~e 73 (314)
||++++..+++++ .+++++.+.|+| .++||+|||+++++|+.|...+.+... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 6777777655543 477889999999 499999999999999999988776321 23568899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECC
Q 021300 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153 (314)
Q Consensus 74 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p 153 (314)
++|+|+++|++++++++||+|+..+.. ...|+|++|+.++.+.++++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp 128 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKP 128 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCC
Confidence 999999999999999999999753211 136899999999999999999
Q ss_pred CCCCcccccccchhhhhhhhhhHhcCCCC----CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC
Q 021300 154 EGTPLDATAPLLCAGITVYSPLRFYGLDK----PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (314)
Q Consensus 154 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~----~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g 228 (314)
+++++++++.+++.+.++|+++.....+. +|++++|+|+ |.+|++++++++.+|++++++++. + +.++++++|
T Consensus 129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g 206 (350)
T cd08248 129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLG 206 (350)
T ss_pred CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhC
Confidence 99999999999999999999987777665 4999999996 999999999999999998887764 3 456778899
Q ss_pred CcEEecCCCHHHHHHHc--CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 229 ADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 229 a~~~v~~~~~~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
++.+++..+.+....+. +++|++||++|.. ....++++++++|+++.+|..
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred CceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence 98888877655444433 4699999999987 589999999999999999864
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.2e-29 Score=227.79 Aligned_cols=238 Identities=23% Similarity=0.276 Sum_probs=197.4
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++.+...+.+..+++.+.+.|.+.++||+||+.++++|+.|+....+.++....|.++|||++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 5677776545455677777888888999999999999999999998887665456688999999999999995 57999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+.... ..+....|+|++|+.++...++++|+++++++++.+++++.+
T Consensus 79 Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 129 (320)
T cd08243 79 GQRVATAMG-----------------------------GMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT 129 (320)
T ss_pred CCEEEEecC-----------------------------CCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence 999974210 001234589999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCC--HHHHHHHcCC
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT 247 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~--~~~~~~~~~~ 247 (314)
||+++.....+++|+++||+|+ |.+|++++++|+..|++++++++++++.+.+ +++|++.+++... .+.+.+..++
T Consensus 130 a~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~ 208 (320)
T cd08243 130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGG 208 (320)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCC
Confidence 9999988877899999999997 9999999999999999999999888777555 7899988775432 2334444347
Q ss_pred ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+|+++|++|+. .+..++++++++|+++.+|...
T Consensus 209 ~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (320)
T cd08243 209 FDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLG 241 (320)
T ss_pred ceEEEECCChH-HHHHHHHHhccCCEEEEEccCC
Confidence 99999999986 5899999999999999999754
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=6.7e-29 Score=224.08 Aligned_cols=252 Identities=29% Similarity=0.343 Sum_probs=209.4
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++...+.+..+++.+.+.|.+.+++|+||+.++++|+.|+....+.++. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 67788877666777888888888889999999999999999999887765532 35678999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+.. ...|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 99999741 2358999999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~ 245 (314)
++|+++.....+.++++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+. +....
T Consensus 126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT 204 (323)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh
Confidence 99999877777899999999997 9999999999999999999988887777555 7789888887766543 22332
Q ss_pred --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
.++|++++++|+.. ....+++++++|+++.+|..+. ...++...++.++..+.
T Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (323)
T cd05276 205 GGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLT 260 (323)
T ss_pred CCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEE
Confidence 36999999999875 8889999999999999987643 34555555555666665
No 104
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=1.9e-29 Score=229.02 Aligned_cols=223 Identities=26% Similarity=0.367 Sum_probs=178.0
Q ss_pred CCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCC----CCCCcccccccEE---EEEeC-CCCCCCCCC
Q 021300 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT----IYPIVPGHEIVGV---VTEVG-SKVSKFKVG 91 (314)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~----~~p~~~G~e~~G~---V~~vG-~~v~~~~~G 91 (314)
+.+......+.++|.|.++|++||+.++++|+.|..++.+.+... .+|.+++.++.|+ +...| ..+..+..|
T Consensus 15 ~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g 94 (347)
T KOG1198|consen 15 GGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHG 94 (347)
T ss_pred CCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEee
Confidence 334444557899999999999999999999999999999877643 3665555555554 33334 233345556
Q ss_pred CEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhh
Q 021300 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (314)
Q Consensus 92 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta 171 (314)
|++. .....|+|+||+++|...++++|++++++++|.+|.++.||
T Consensus 95 ~~~~-----------------------------------~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA 139 (347)
T KOG1198|consen 95 DAVV-----------------------------------AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTA 139 (347)
T ss_pred eEEe-----------------------------------eccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHH
Confidence 5554 34578999999999999999999999999999999999999
Q ss_pred hhhhHhcC------CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH
Q 021300 172 YSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244 (314)
Q Consensus 172 ~~~l~~~~------~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~ 244 (314)
|.++.+.. ..++|++|||+|+ |++|++++|+|++.++..++++.+ ++..++++++|++.++|+++++..++.
T Consensus 140 ~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-~e~~~l~k~lGAd~vvdy~~~~~~e~~ 218 (347)
T KOG1198|consen 140 LSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-KEKLELVKKLGADEVVDYKDENVVELI 218 (347)
T ss_pred HHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-cchHHHHHHcCCcEeecCCCHHHHHHH
Confidence 99999888 8899999999986 999999999999999544444444 444588899999999999998876665
Q ss_pred cC----CccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300 245 MG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 245 ~~----~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
.. +||+||||+|+.. ......++...|+...++.
T Consensus 219 kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~ 256 (347)
T KOG1198|consen 219 KKYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGL 256 (347)
T ss_pred HhhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEe
Confidence 54 7999999999974 7888888888876555543
No 105
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1.1e-28 Score=223.04 Aligned_cols=257 Identities=26% Similarity=0.343 Sum_probs=209.7
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++++...+.+..+++.+++.|.+.+++|+||+.++++|++|.....+.+. ....|+++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 5677777655566688889999999999999999999999999988777553 245788999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+..+. + .....|++++|+.++.+.++++|+++++++++.++++..
T Consensus 81 ~Gd~v~~~~~--------------------------~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 81 VGDRVWLTNL--------------------------G----WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCEEEEecc--------------------------c----cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 9999975320 0 001368899999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~ 245 (314)
++|+++.....+.+|++++|+|+ +.+|++++++++..|++++++++++++.+.+ +++|++.+++....+. +.+..
T Consensus 131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (325)
T cd08253 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAAT 209 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHc
Confidence 99999987677899999999997 9999999999999999999999888777665 6789988887766543 33332
Q ss_pred --CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 --~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
+++|+++++++... ....++.++++|+++.+|.......++...++.++..+.
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~ 264 (325)
T cd08253 210 AGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIR 264 (325)
T ss_pred CCCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEE
Confidence 36999999999875 788899999999999998754334455555444555444
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=2.7e-28 Score=221.61 Aligned_cols=257 Identities=23% Similarity=0.303 Sum_probs=203.9
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++...+.+..+++++.|.|.|+++||+|||.++++|+.|...+.+.+.. +.+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 67888877666667889999999999999999999999999999887776532 34578899999999999 7778899
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+.... + .+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~---------------~--------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGW---------------G--------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCc---------------c--------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 9999975210 0 0112468999999999999999999999999999999999
Q ss_pred hhhhhhH---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH-HHHH
Q 021300 170 TVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAA 244 (314)
Q Consensus 170 ta~~~l~---~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~-~~~~ 244 (314)
+++.++. .....++|++++|+|+ |++|++++|+|+.+|+++++++.++++.+.+ +++|++.++++++.+. +..+
T Consensus 130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (324)
T cd08288 130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPL 208 (324)
T ss_pred HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhh
Confidence 9887764 3343336789999998 9999999999999999999998888777555 7899999988876433 2333
Q ss_pred c-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEee
Q 021300 245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDSW 300 (314)
Q Consensus 245 ~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~~ 300 (314)
. +++|.++|++++. .+..++..++.+|+++.+|...+ +..++...++.++.++.+
T Consensus 209 ~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08288 209 QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLG 265 (324)
T ss_pred ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEE
Confidence 3 3689999999975 37788899999999999997532 233444445466677663
No 107
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.2e-28 Score=220.86 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=191.7
Q ss_pred CCccceeeeeecCCCCCeEEEEEeeeccChhhhhhH-hcCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecc
Q 021300 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (314)
Q Consensus 22 ~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 98 (314)
++.+++++++.|++.++||+||+.++++|+.|+..+ .+.... +..|.++|+|++|+|+++|++++.+++||+|+..
T Consensus 4 ~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~- 82 (312)
T cd08269 4 PGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL- 82 (312)
T ss_pred CCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe-
Confidence 346889999999999999999999999999998877 654321 2347899999999999999999999999999741
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc
Q 021300 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (314)
Q Consensus 99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~ 178 (314)
..|+|++|+.++.+.++++|+++ ..++.+..++.++++++. .
T Consensus 83 -----------------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~ 124 (312)
T cd08269 83 -----------------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-R 124 (312)
T ss_pred -----------------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-h
Confidence 35889999999999999999988 222222367788999887 5
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC--CccEEE
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGII 252 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~--~~d~v~ 252 (314)
..+++|++++|+|+|.+|.+++++|+..|++ ++++++.+++. ++.+++|++.+++.+..+ .+.+... ++|+++
T Consensus 125 ~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vl 203 (312)
T cd08269 125 GWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL-ALARELGATEVVTDDSEAIVERVRELTGGAGADVVI 203 (312)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEE
Confidence 6689999999998899999999999999998 88877776665 466889998888765543 3333433 699999
Q ss_pred EccCCcccHHHHHHhhccCCEEEEEcCCC-CCcccchhhhhcCceeEe
Q 021300 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~ 299 (314)
|++|........+++|+++|+++.+|... .+..++...+..++..+.
T Consensus 204 d~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T cd08269 204 EAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLI 251 (312)
T ss_pred ECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEE
Confidence 99987666889999999999999999754 334555555566666665
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=6.4e-28 Score=219.61 Aligned_cols=247 Identities=22% Similarity=0.202 Sum_probs=195.0
Q ss_pred cchhhhccC----CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCC
Q 021300 12 NAFGWAAKD----TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSK 84 (314)
Q Consensus 12 ~~~~~~~~~----~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~ 84 (314)
+++++...+ .+..+++++.+.|++.+++|+|||.++++|+.|...+.+.... ...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 455565544 4577888999999999999999999999999886655443211 123467899999999999964
Q ss_pred CCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecC-CceEECCCCCC--cccc
Q 021300 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTP--LDAT 161 (314)
Q Consensus 85 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~~p~~~~--~~~a 161 (314)
++++||+|+. .++|++|+.++. +.++++|++++ +.++
T Consensus 83 --~~~~Gd~V~~--------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~ 122 (329)
T cd05288 83 --DFKVGDLVSG--------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAY 122 (329)
T ss_pred --CCCCCCEEec--------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHH
Confidence 7999999962 247999999999 99999999985 4455
Q ss_pred cc-cchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH
Q 021300 162 AP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (314)
Q Consensus 162 a~-~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~ 239 (314)
+. +++.+.++|+++.....+.+|+++||+|+ |++|++++++++..|++++++++++++...+.+.+|++.+++.++.+
T Consensus 123 ~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 202 (329)
T cd05288 123 LGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPD 202 (329)
T ss_pred HHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChh
Confidence 44 88999999999987777899999999996 99999999999999999999988887776554449999888887654
Q ss_pred HH---HHHc-CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-c-----ccchhhhhcCceeEe
Q 021300 240 EM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGEEEDS 299 (314)
Q Consensus 240 ~~---~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~-----~~~~~~~~~~~~~i~ 299 (314)
.. .+.. +++|++||++|+. .+..++++++++|+++.+|..... . .++....+.++.++.
T Consensus 203 ~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (329)
T cd05288 203 LAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQ 271 (329)
T ss_pred HHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEE
Confidence 32 2332 4799999999986 589999999999999999875432 1 123445556677665
No 109
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=4.5e-28 Score=220.71 Aligned_cols=232 Identities=25% Similarity=0.369 Sum_probs=195.6
Q ss_pred cchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|++.+...+.+..+++++.+.|.|.+++|+||+.++++|+.|+..+.+.... ..+|+++|+|++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 5667777677778999999999999999999999999999999888776542 246889999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|...+ ..|++++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 82 GDRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 99997421 2488999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHH-HH-cCC
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-AA-MGT 247 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~-~~-~~~ 247 (314)
+|+++.....+++|++++|+|+ |.+|++++++++..|++++++++ +++. .+++++|++. ++....+... .. .++
T Consensus 127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~ 203 (331)
T cd08273 127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNH-AALRELGATP-IDYRTKDWLPAMLTPGG 203 (331)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHH-HHHHHcCCeE-EcCCCcchhhhhccCCC
Confidence 9999987777899999999997 99999999999999999988887 5555 5557899764 3443332222 12 247
Q ss_pred ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+|++++++++.. +..++++++++|+++.+|....
T Consensus 204 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~ 237 (331)
T cd08273 204 VDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSS 237 (331)
T ss_pred ceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCC
Confidence 999999999886 8899999999999999997653
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=1.4e-27 Score=215.19 Aligned_cols=248 Identities=28% Similarity=0.336 Sum_probs=200.8
Q ss_pred hhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 021300 14 FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93 (314)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 93 (314)
+.+...+.+..+++.+.+.|.+.++||+|||.++++|+.|+....+.++. .+|.++|||++|+|+.+|+++.++++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~ 81 (320)
T cd05286 3 VRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDR 81 (320)
T ss_pred EEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCE
Confidence 33333344455666677777889999999999999999999887775542 56778999999999999999999999999
Q ss_pred EEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 021300 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173 (314)
Q Consensus 94 V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 173 (314)
|+.. ...|++++|+.++.+.++++|++++.++++.+++...++|+
T Consensus 82 V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~ 126 (320)
T cd05286 82 VAYA-----------------------------------GPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHY 126 (320)
T ss_pred EEEe-----------------------------------cCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHH
Confidence 9741 02588999999999999999999999999989999999999
Q ss_pred hhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--C
Q 021300 174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--T 247 (314)
Q Consensus 174 ~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~ 247 (314)
++.....+++|++++|+|+ |++|++++++++.+|++++++++++++.+.+ +++|++.+++....+. +..... +
T Consensus 127 ~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 205 (320)
T cd05286 127 LLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRG 205 (320)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCC
Confidence 9877777899999999996 9999999999999999999998888777665 7799988887766443 333332 6
Q ss_pred ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC-cccchhhhhcCceeEe
Q 021300 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGEEEDS 299 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~-~~~~~~~~~~~~~~i~ 299 (314)
+|++++++++. ....++++++++|+++.+|..... ..++...+..++..+.
T Consensus 206 ~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 257 (320)
T cd05286 206 VDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLT 257 (320)
T ss_pred eeEEEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEE
Confidence 99999999986 588999999999999999876532 2334433334555543
No 111
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=5.1e-28 Score=207.76 Aligned_cols=242 Identities=20% Similarity=0.178 Sum_probs=190.6
Q ss_pred CCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeC--CCCCCCCCCCEEEecc
Q 021300 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG--SKVSKFKVGDKVGVGC 98 (314)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~ 98 (314)
.++++++++.++|+|++||||+|+.+.+++|.....+.. .+.=..|+-+|...+|.++... |+.+.|++||.|.
T Consensus 23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~--- 98 (340)
T COG2130 23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV--- 98 (340)
T ss_pred CCCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE---
Confidence 357799999999999999999999999999843322211 1111335556666555444433 5677899999996
Q ss_pred cccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccc--cccchhhhhhhhhhH
Q 021300 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT--APLLCAGITVYSPLR 176 (314)
Q Consensus 99 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~ 176 (314)
...+|++|..++.+.+.+++++.-...+ ..+.++..|||.+|.
T Consensus 99 -----------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl 143 (340)
T COG2130 99 -----------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLL 143 (340)
T ss_pred -----------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHH
Confidence 3358999999999999999866433222 377889999999999
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc----CCccEE
Q 021300 177 FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGI 251 (314)
Q Consensus 177 ~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~----~~~d~v 251 (314)
+.++.|+|++|+|-+| |++|..+.|+||..|++|+.++..+++...+.+.+|.|.++|++.++....+. .++|+.
T Consensus 144 ~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvy 223 (340)
T COG2130 144 DIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVY 223 (340)
T ss_pred HhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEE
Confidence 9999999999999887 99999999999999999999999999998888789999999999986655544 489999
Q ss_pred EEccCCcccHHHHHHhhccCCEEEEEcCCCC------Ccccch-hhhhcCceeEe-eec
Q 021300 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PLELPA-FSLLMGEEEDS-WWQ 302 (314)
Q Consensus 252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~------~~~~~~-~~~~~~~~~i~-~~~ 302 (314)
||++|+.. +..++..|..++|++++|.-++ +...+. ..++.++++++ |..
T Consensus 224 feNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv 281 (340)
T COG2130 224 FENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIV 281 (340)
T ss_pred EEcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEe
Confidence 99999985 9999999999999999997432 112222 23444688887 444
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.5e-27 Score=216.03 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=203.4
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++++...+.++.+++++.+.|.+.+++|+||+.++++|+.|.....+.... ...|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 67888877666667888888888899999999999999999999887765431 24578899999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|..... +. ....|++++|+.++...++++|+.+++++++.++..+.
T Consensus 81 ~Gd~V~~~~~--------------------------~~----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG--------------------------GL----GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC--------------------------Cc----CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999974210 00 01368899999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH--HHHHHHcC
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG 246 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~--~~~~~~~~ 246 (314)
+||+++.....+++|++++|+|+ |.+|++++++++..|+++++++++ ++...+ +++|++.+++.... +.+.+...
T Consensus 131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 208 (326)
T cd08272 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTG 208 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcC
Confidence 99999877777899999999986 999999999999999999988877 666444 77999888776654 22333333
Q ss_pred --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
++|+++|++++.. ....+++++++|+++.+|... +.+......++..+.
T Consensus 209 ~~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~ 259 (326)
T cd08272 209 GRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYS 259 (326)
T ss_pred CCCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEE
Confidence 6999999999864 888999999999999998753 222223334555544
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.96 E-value=1.4e-27 Score=219.79 Aligned_cols=236 Identities=22% Similarity=0.273 Sum_probs=183.5
Q ss_pred cchhhhccCCCCccceeeeeecC-CCCCeEEEEEeeeccChhhhhhHhcCCCCCC-CCCcccccccEEEEEeCCCCC-CC
Q 021300 12 NAFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVS-KF 88 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~-~p~~~G~e~~G~V~~vG~~v~-~~ 88 (314)
+++++...+++..++..+.+.|+ +.+++|+||+.++++|+.|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 45666665555444445555553 3999999999999999999887654222112 377899999999999999998 89
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC----ceEECCCCCCccccccc
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPLDATAPL 164 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~ 164 (314)
++||+|+..... .....|+|++|+.++.. .++++|+++++++++.+
T Consensus 82 ~~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~ 131 (352)
T cd08247 82 KVGDEVCGIYPH------------------------------PYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW 131 (352)
T ss_pred CCCCEEEEeecC------------------------------CCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence 999999743210 00136899999999987 78999999999999999
Q ss_pred chhhhhhhhhhHhcC-CCCCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHH-
Q 021300 165 LCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD- 239 (314)
Q Consensus 165 ~~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~- 239 (314)
+..+.|||+++.... .+++|++++|+|+ +.+|.+++++|+.. +. .++.+. ++++.. .++++|++.+++.++.+
T Consensus 132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~-~~~~~g~~~~i~~~~~~~ 209 (352)
T cd08247 132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAE-LNKKLGADHFIDYDAHSG 209 (352)
T ss_pred HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHH-HHHHhCCCEEEecCCCcc
Confidence 999999999998776 6899999999998 89999999999987 44 455554 455554 55889998888866543
Q ss_pred --H----HHHHc--CCccEEEEccCCcccHHHHHHhhc---cCCEEEEEcC
Q 021300 240 --E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLVGA 279 (314)
Q Consensus 240 --~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~G~ 279 (314)
. +.... +++|++||++|+......++++++ ++|+++.++.
T Consensus 210 ~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~ 260 (352)
T cd08247 210 VKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVG 260 (352)
T ss_pred cchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeC
Confidence 2 22333 379999999998555888999999 9999998753
No 114
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.7e-27 Score=214.58 Aligned_cols=236 Identities=29% Similarity=0.406 Sum_probs=195.7
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
||++++..++....+++++.+.|++.+++|+|||.++++|+.|+....+......+|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 67777765442236889999999999999999999999999999887765543334778999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+..+. ....|++++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus 81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~ 128 (325)
T cd08271 81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT 128 (325)
T ss_pred CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence 999975321 124688999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG 246 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~ 246 (314)
+|+++.....+++|++++|+|+ |.+|++++++++..|++++++. .+++. +.++++|++.+++....+. +.+...
T Consensus 129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (325)
T cd08271 129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNF-EYVKSLGADHVIDYNDEDVCERIKEITG 206 (325)
T ss_pred HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHH-HHHHHcCCcEEecCCCccHHHHHHHHcC
Confidence 9999988777899999999998 8999999999999999988776 55555 4447789988887766433 333332
Q ss_pred --CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 247 --~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
++|++++++++.. ...++++++++|+++.+|...
T Consensus 207 ~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~ 242 (325)
T cd08271 207 GRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRP 242 (325)
T ss_pred CCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCC
Confidence 6999999999875 677899999999999997543
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.6e-27 Score=213.54 Aligned_cols=257 Identities=26% Similarity=0.350 Sum_probs=206.8
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
||++.+...+.+..+++.+.+.|.+.+++++|+|.++++|+.|.....+.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 56666665455566777788888889999999999999999998877665442 24578899999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|...+.. +....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (328)
T cd08268 81 VGDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL 130 (328)
T ss_pred CCCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence 99999753210 112458899999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~ 245 (314)
++|.++.....++++++++|+|+ |.+|++++++++..|+++++++++.++...+ +++|++.+++.+..+ .+.+..
T Consensus 131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (328)
T cd08268 131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRIT 209 (328)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHh
Confidence 99999987777899999999997 9999999999999999999999888777666 678988887776543 233333
Q ss_pred C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
. ++|++++++++. ....++++++++|+++.+|.... +..++....+.++..+.
T Consensus 210 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 265 (328)
T cd08268 210 GGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFR 265 (328)
T ss_pred CCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEE
Confidence 3 699999999986 48889999999999999987542 23444443455666654
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=5.1e-27 Score=212.31 Aligned_cols=252 Identities=29% Similarity=0.340 Sum_probs=204.9
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
|+++.+...+.+..+++.+.+.|.+++++++|||.++++|+.|.....+.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 56666655455556667777777789999999999999999998887665432 24578999999999999999999999
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
+||+|+.. ...|++++|+.++...++++|+++++.+++.++....
T Consensus 81 ~Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 125 (325)
T TIGR02824 81 VGDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF 125 (325)
T ss_pred CCCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence 99999741 1348899999999999999999999999989999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHc
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~ 245 (314)
++|+++.....+++|++++|+|+ |++|.+++++++..|++++++.+++++.+.+ +++|++.+++....+. +....
T Consensus 126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02824 126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAET 204 (325)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHc
Confidence 99999877777899999999997 9999999999999999999998888777544 7899888877765443 33333
Q ss_pred C--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC-CcccchhhhhcCceeEe
Q 021300 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGEEEDS 299 (314)
Q Consensus 246 ~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~ 299 (314)
. ++|++++++|+. .+..++++++++|+++.+|.... ...++...++.++.++.
T Consensus 205 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 260 (325)
T TIGR02824 205 GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTIT 260 (325)
T ss_pred CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEE
Confidence 2 699999999976 48889999999999999987542 23555555556677765
No 117
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=4.6e-27 Score=211.14 Aligned_cols=237 Identities=30% Similarity=0.424 Sum_probs=196.6
Q ss_pred ccchhhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK 87 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 87 (314)
|+++.+...+....+++++.+.|.++++||+|||.++++|+.|+..+.+... ...+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 5677776655555566777888889999999999999999999988877542 2345889999999999999999999
Q ss_pred CCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchh
Q 021300 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (314)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 167 (314)
+++||+|+..+.. ...|++++|+.++...++++|+++++..++.+++.
T Consensus 81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 9999999743210 13588999999999999999999999999989999
Q ss_pred hhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc-
Q 021300 168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM- 245 (314)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~- 245 (314)
+.++|+++.....+.+|++++|+|+ |.+|++++++++..|++++++++++ +. +.++++|.+.+++....+......
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 206 (309)
T cd05289 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NA-DFLRSLGADEVIDYTKGDFERAAAP 206 (309)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hH-HHHHHcCCCEEEeCCCCchhhccCC
Confidence 9999999988777899999999997 9999999999999999999888776 54 445789988888766544332122
Q ss_pred CCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 246 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+++|++++++++. ....++++++++|+++.+|....
T Consensus 207 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~ 242 (309)
T cd05289 207 GGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPP 242 (309)
T ss_pred CCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCc
Confidence 3699999999988 48999999999999999987543
No 118
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=2e-26 Score=206.54 Aligned_cols=214 Identities=25% Similarity=0.383 Sum_probs=183.3
Q ss_pred ecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCcccc
Q 021300 32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCA 110 (314)
Q Consensus 32 ~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~ 110 (314)
+|++.+++|+||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|++++++++||+|+..+
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------ 69 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------ 69 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence 57889999999999999999999988776542 35688999999999999999999999999997422
Q ss_pred CCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEE
Q 021300 111 IDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (314)
Q Consensus 111 ~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~ 190 (314)
....|+|++|+.++.+.++++|+++++++++.++..+.++|++++ ...+++|++++|+
T Consensus 70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 023589999999999999999999999999999999999999986 5568999999998
Q ss_pred cC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHH
Q 021300 191 GL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPL 264 (314)
Q Consensus 191 Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~ 264 (314)
|+ |.+|++++++++..|++++++++.+++...+ +++|++.+++....+. +.+... ++|+++|+++.. .....
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence 76 9999999999999999999998888777666 7899998888766433 333333 699999999865 48889
Q ss_pred HHhhccCCEEEEEcCCC
Q 021300 265 IGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 265 ~~~l~~~G~~v~~G~~~ 281 (314)
+++++++|+++.+|..+
T Consensus 206 ~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 206 LNCLAPGGRYVEIAMTA 222 (303)
T ss_pred HHHhccCcEEEEEeccC
Confidence 99999999999998754
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=3e-26 Score=207.23 Aligned_cols=232 Identities=30% Similarity=0.398 Sum_probs=186.8
Q ss_pred hhccCCCCcc--ceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC---CCCCCcccccccEEEEEeCCCCCCCCC
Q 021300 16 WAAKDTSGVL--SPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (314)
Q Consensus 16 ~~~~~~~~~~--~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~ 90 (314)
|+.++++.++ ++.+.+.|++.++||+||++++++|+.|...+.+.++. ...|.++|||++|+|+++|+++..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 82 (319)
T cd08267 3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV 82 (319)
T ss_pred eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence 3444554444 77788999999999999999999999999887775521 235678999999999999999999999
Q ss_pred CCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhh
Q 021300 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (314)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~t 170 (314)
||+|+.... ....|++++|+.++.+.++++|++++.++++.+++.+.+
T Consensus 83 Gd~V~~~~~--------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 130 (319)
T cd08267 83 GDEVFGRLP--------------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT 130 (319)
T ss_pred CCEEEEecc--------------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence 999974221 013588999999999999999999999999999999999
Q ss_pred hhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHc--CC
Q 021300 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GT 247 (314)
Q Consensus 171 a~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~--~~ 247 (314)
||+++.....+++|++++|+|+ |++|++++++++..|++++++++. ++. +.++++|++.+++.+..+...... ++
T Consensus 131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 208 (319)
T cd08267 131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNA-ELVRSLGADEVIDYTTEDFVALTAGGEK 208 (319)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHH-HHHHHcCCCEeecCCCCCcchhccCCCC
Confidence 9999988877899999999997 999999999999999999888864 555 455889998888766544322222 36
Q ss_pred ccEEEEccCCc-ccHHHHHHhhccCCEEEEEcCCC
Q 021300 248 MDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 248 ~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+|++++++|+. ......+..++++|+++.+|...
T Consensus 209 ~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 209 YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred CcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 99999999843 22333444499999999999764
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=7.2e-26 Score=204.46 Aligned_cols=251 Identities=30% Similarity=0.420 Sum_probs=201.0
Q ss_pred ccchhhhccCCCCccceeeeeecCCC-CCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 021300 11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF 88 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 88 (314)
|+++++...+.+..+++.+.+ |.+. +++++||+.++++|+.|+..+.+.+.. ...|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 566666554455567777777 7666 499999999999999999887775532 2456789999999999999999999
Q ss_pred CCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhh
Q 021300 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (314)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 168 (314)
++||+|+..+ ..|++++|+.++.+.++++|++++..+++.++...
T Consensus 80 ~~G~~V~~~~-----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 80 KVGDRVVALT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCEEEEec-----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 9999997421 25889999999999999999999998888889999
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH---HHHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA 244 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~---~~~~ 244 (314)
.+||.++.....+++|++++|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+. +...
T Consensus 125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 203 (323)
T cd08241 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKAL 203 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHH
Confidence 999999876667899999999998 9999999999999999999998888777555 6789888887765433 3333
Q ss_pred cC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcc-cchhhhhcCceeEe
Q 021300 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGEEEDS 299 (314)
Q Consensus 245 ~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~-~~~~~~~~~~~~i~ 299 (314)
.. ++|.+++++|.. ....++++++++|+++.+|....... ++....+.++.++.
T Consensus 204 ~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (323)
T cd08241 204 TGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVV 260 (323)
T ss_pred cCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEE
Confidence 33 699999999985 48889999999999999997544332 33434455666655
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=6.9e-26 Score=206.37 Aligned_cols=229 Identities=29% Similarity=0.420 Sum_probs=184.6
Q ss_pred hhhccCCCCccceeeeeecCCCCCeEEEEEeeeccChhhhhhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 021300 15 GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93 (314)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 93 (314)
.+...+.+..+++.+.+.|.+++++|+||+.++++|+.|...+.+.+.. +..|.++|||++|+|+.+|+++.++++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~ 83 (337)
T cd08275 4 VLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDR 83 (337)
T ss_pred EEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCE
Confidence 3333344455777777888889999999999999999999888775532 345778999999999999999999999999
Q ss_pred EEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 021300 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173 (314)
Q Consensus 94 V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 173 (314)
|+.. ...|+|++|+.++.+.++++|+.+++++++.+++.+.++|+
T Consensus 84 V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 128 (337)
T cd08275 84 VMGL-----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYY 128 (337)
T ss_pred EEEe-----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHH
Confidence 9742 13488999999999999999999999999999999999999
Q ss_pred hhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcCCcEEecCCCHH---HHHHHc-CC
Q 021300 174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQD---EMQAAM-GT 247 (314)
Q Consensus 174 ~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~-~~ 247 (314)
++.....+++|++|+|+|+ |.+|++++++++.. ..+.++... +++. ..++++|++.+++.+..+ .+.+.. ++
T Consensus 129 ~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 206 (337)
T cd08275 129 ALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKH-EALKENGVTHVIDYRTQDYVEEVKKISPEG 206 (337)
T ss_pred HHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHH-HHHHHcCCcEEeeCCCCcHHHHHHHHhCCC
Confidence 9877777899999999998 99999999999998 222223332 3344 444778998888776543 233333 36
Q ss_pred ccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+|+++|++|+.. ...++++++++|+++.+|...
T Consensus 207 ~d~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 239 (337)
T cd08275 207 VDIVLDALGGED-TRKSYDLLKPMGRLVVYGAAN 239 (337)
T ss_pred ceEEEECCcHHH-HHHHHHhhccCcEEEEEeecC
Confidence 999999999874 888999999999999998754
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.94 E-value=4.6e-25 Score=195.95 Aligned_cols=204 Identities=27% Similarity=0.358 Sum_probs=176.0
Q ss_pred CeEEEEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCC
Q 021300 38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117 (314)
Q Consensus 38 ~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c 117 (314)
+||+||+.++++|+.|++...+.. ..+|.++|+|++|+|+++|++++.+++||+|...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-------------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-------------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence 589999999999999999887754 3567899999999999999999999999999741
Q ss_pred CccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHH
Q 021300 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLG 196 (314)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG 196 (314)
..|+|++|+.++.+.++++|+.+++.+++.+++...++|.++.....+++|++++|+|+ |.+|
T Consensus 59 ----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 59 ----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred ----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 25889999999999999999999999999999999999999877677899999999985 9999
Q ss_pred HHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHH---HHHHc--CCccEEEEccCCcccHHHHHHhhc
Q 021300 197 HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK 269 (314)
Q Consensus 197 ~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~~v~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~ 269 (314)
++++++++.+|++++++++++++...+ ++++ ++.+++....+. +.+.. .++|+++|++|+. .+..++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence 999999999999999998888777555 4566 677787766543 33333 2699999999987 5999999999
Q ss_pred cCCEEEEEcCCC
Q 021300 270 SQGKLVLVGAPE 281 (314)
Q Consensus 270 ~~G~~v~~G~~~ 281 (314)
++|+++.+|...
T Consensus 201 ~~g~~v~~g~~~ 212 (293)
T cd05195 201 PFGRFVEIGKRD 212 (293)
T ss_pred cCceEEEeeccc
Confidence 999999998754
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.93 E-value=4.1e-24 Score=189.72 Aligned_cols=199 Identities=28% Similarity=0.408 Sum_probs=171.1
Q ss_pred EEEeeeccChhhhhhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccc
Q 021300 42 FKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI 121 (314)
Q Consensus 42 Vkv~a~~l~~~d~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~ 121 (314)
||+.++++|+.|+..+.+.++ .|.++|+|++|+|+++|+.++.+++||+|...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------ 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------ 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence 899999999999998877543 36789999999999999999999999999741
Q ss_pred cccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHH
Q 021300 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 200 (314)
Q Consensus 122 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~ 200 (314)
..|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.....+++|++++|+|+ |.+|++++
T Consensus 55 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 55 ------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred ------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 24889999999999999999999999999999999999999866667899999999986 99999999
Q ss_pred HHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEecCCCHHH---HHHHcC--CccEEEEccCCcccHHHHHHhhccCCE
Q 021300 201 KFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGK 273 (314)
Q Consensus 201 ~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~ 273 (314)
++++..|++++++++++++...+ +++|+ +.++++.+.+. +.+... ++|+++|++++. .+..+++.++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence 99999999999999888877555 78998 77777766543 333322 699999999865 58889999999999
Q ss_pred EEEEcCCC
Q 021300 274 LVLVGAPE 281 (314)
Q Consensus 274 ~v~~G~~~ 281 (314)
++.+|...
T Consensus 201 ~v~~g~~~ 208 (288)
T smart00829 201 FVEIGKRD 208 (288)
T ss_pred EEEEcCcC
Confidence 99999754
No 124
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=7.9e-24 Score=162.00 Aligned_cols=108 Identities=36% Similarity=0.629 Sum_probs=93.4
Q ss_pred CCeEEEEEeeeccChhhhhhHhc-CCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCC
Q 021300 37 EKDVTFKVTHCGICHSDLHMIKN-EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLEN 115 (314)
Q Consensus 37 ~~eVlVkv~a~~l~~~d~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~ 115 (314)
|+||||||+++|||++|++++.+ .....+.|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 79999999999999999999998 34556899999999999999999999999999999886666 59999999999999
Q ss_pred CCCccccccccccCCCCccCcccceEEeecCCceEEC
Q 021300 116 YCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152 (314)
Q Consensus 116 ~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 152 (314)
+|++.... +....|+|+||+.+++++++++
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99876543 3447899999999999999875
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.90 E-value=3.3e-22 Score=177.85 Aligned_cols=175 Identities=32% Similarity=0.478 Sum_probs=147.8
Q ss_pred CCCCcccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEee
Q 021300 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA 144 (314)
Q Consensus 65 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v 144 (314)
.+|.++|+|++|+|+++|+++++|++||+|+. .+.|++|+.+
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~~v 60 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERVVV 60 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEEEc
Confidence 58899999999999999999999999999973 1358999999
Q ss_pred cCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHH
Q 021300 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEA 223 (314)
Q Consensus 145 ~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~ 223 (314)
+.+.++++|+++++++++.+ +.+.+||+++. ...+++|++++|+|+|.+|++++++|+.+|++ ++++++++++.. +
T Consensus 61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~ 137 (277)
T cd08255 61 PANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE-L 137 (277)
T ss_pred CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-H
Confidence 99999999999999998877 78899999986 45689999999998899999999999999998 888888877765 7
Q ss_pred HHHcC-CcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC
Q 021300 224 IERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP 283 (314)
Q Consensus 224 ~~~~g-a~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~ 283 (314)
++++| ++.++.... .. ....++|++||+++....+...+++++++|+++.+|..+..
T Consensus 138 ~~~~g~~~~~~~~~~-~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~ 195 (277)
T cd08255 138 AEALGPADPVAADTA-DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK 195 (277)
T ss_pred HHHcCCCccccccch-hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC
Confidence 78888 565554332 11 11237999999988766688999999999999999986543
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.87 E-value=6.1e-22 Score=193.11 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=199.1
Q ss_pred CCCCccceeeeeec---CCCCCeEEEEEeeeccChhhhhhHhcCCCCCCCC-------CcccccccEEEEEeCCCCCCCC
Q 021300 20 DTSGVLSPFHFSRR---ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-------IVPGHEIVGVVTEVGSKVSKFK 89 (314)
Q Consensus 20 ~~~~~~~~~~~~~p---~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~ 89 (314)
++-..+++.+-+.. +..++.=+-.|-|+.||.+|+.+..|+.+....| +.+|.|++|+- +
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------A 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------C
Confidence 44455555555544 4467777999999999999999999988755444 78999999984 4
Q ss_pred CCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCceEECCCCCCcccccccchhhh
Q 021300 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (314)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 169 (314)
-|.||+ +....-++++.+.++.++++.+|+...+++|++.|+.+.
T Consensus 1494 ~GrRvM-----------------------------------~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1494 SGRRVM-----------------------------------GMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred CCcEEE-----------------------------------EeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence 599997 344567899999999999999999999999999999999
Q ss_pred hhhhhhHhcCCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---CcEEecCCCH---HHHH
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQ---DEMQ 242 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~~~v~~~~~---~~~~ 242 (314)
|+||||...++.|+|+++||++ +|++|++||.+|.++|++|+-++.+.++++.+.+.|+ ...+-|+++. ..+.
T Consensus 1539 TaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl 1618 (2376)
T KOG1202|consen 1539 TAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVL 1618 (2376)
T ss_pred eehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHH
Confidence 9999999999999999999985 5999999999999999999999999999999999887 4667777774 3444
Q ss_pred HHcC--CccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCCcccch-hhhhcCceeEeeeccccccC
Q 021300 243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGEEEDSWWQHDWGDE 308 (314)
Q Consensus 243 ~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 308 (314)
+.+. ++|+|++....+- ++..++||+..||+..+|...-+.+-|+ +.+++++..+.+...+-..+
T Consensus 1619 ~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvme 1686 (2376)
T KOG1202|consen 1619 WHTKGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVME 1686 (2376)
T ss_pred HHhcCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhc
Confidence 4444 7999999999886 9999999999999999998764444444 55666777777555444433
No 127
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.85 E-value=1.2e-19 Score=155.93 Aligned_cols=234 Identities=20% Similarity=0.171 Sum_probs=177.2
Q ss_pred cCCCCCeEEEEEeeeccChhhhhhHhcCCCCC--CCCCcccc----cccEEEEEeCCCCCCCCCCCEEEecccccCCCCC
Q 021300 33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGNT--IYPIVPGH----EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSC 106 (314)
Q Consensus 33 p~~~~~eVlVkv~a~~l~~~d~~~~~~~~~~~--~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c 106 (314)
.++..++||||..+.+.+|...-.+.. .... -.|+.+|. .++|.|++ ++.+++++||.|...
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~-~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~--------- 100 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGK-PDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI--------- 100 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccC-CCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe---------
Confidence 456889999999999998876543322 1111 11333322 67899999 577889999999621
Q ss_pred ccccCCCCCCCCccccccccccCCCCccCcccceEEeecCC--ceEECCC--CCCcccc-cccchhhhhhhhhhHhcCCC
Q 021300 107 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPE--GTPLDAT-APLLCAGITVYSPLRFYGLD 181 (314)
Q Consensus 107 ~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~~p~--~~~~~~a-a~~~~~~~ta~~~l~~~~~~ 181 (314)
=+|.||.++++. ..++++. ..+.... ..+.++..|||..+.+...+
T Consensus 101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p 151 (343)
T KOG1196|consen 101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP 151 (343)
T ss_pred -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence 279999988764 3444443 3333333 26788899999999988889
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH-HHHHHH----cCCccEEEEcc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAA----MGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~-~~~~~~----~~~~d~v~d~~ 255 (314)
+.|++++|-|| |.+|+++.|+|+..|++|+..+.+.++..-+..+||.|..+|+.++ +....+ .+++|+.||++
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 99999999887 9999999999999999999999999999888889999999999887 333333 24899999999
Q ss_pred CCcccHHHHHHhhccCCEEEEEcCCCC---Ccc---cchhhhhcCceeEe-eeccccccC
Q 021300 256 SAVHPLMPLIGLLKSQGKLVLVGAPEK---PLE---LPAFSLLMGEEEDS-WWQHDWGDE 308 (314)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~G~~~~---~~~---~~~~~~~~~~~~i~-~~~~~~~~~ 308 (314)
|+.. +...+..|+..||++.+|+-+. +.+ -+...++.|+++++ |...++..+
T Consensus 232 GG~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~ 290 (343)
T KOG1196|consen 232 GGKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDK 290 (343)
T ss_pred CcHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhh
Confidence 9985 8999999999999999998542 222 22356777999998 555555544
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.54 E-value=5.5e-14 Score=110.63 Aligned_cols=108 Identities=32% Similarity=0.469 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHH---HHHHHcC--CccEEEEccCCcccHHHHHHhh
Q 021300 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLL 268 (314)
Q Consensus 194 ~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l 268 (314)
++|++++|+|+..|++|++++++++++ ++++++|++.++++++.+ .++++++ ++|++|||+|+...+..+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKL-ELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHH-HHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999988776 666899999999998864 4555555 5999999999877899999999
Q ss_pred ccCCEEEEEcCCC-CCcccchhhhhcCceeEeeec
Q 021300 269 KSQGKLVLVGAPE-KPLELPAFSLLMGEEEDSWWQ 302 (314)
Q Consensus 269 ~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~i~~~~ 302 (314)
+++|+++.+|.++ .+..++...++.+++++.++.
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~ 114 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSW 114 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEES
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEc
Confidence 9999999999988 778999999999999998433
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.20 E-value=3.8e-10 Score=107.30 Aligned_cols=119 Identities=23% Similarity=0.245 Sum_probs=90.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCH-------------HHH---HH
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQ-------------DEM---QA 243 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~-------------~~~---~~ 243 (314)
..++++|+|+|+|++|+++++.|+.+|++|++++.+++++ +.++++|++.+ ++..+. +.. .+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rl-e~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVA-EQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 3689999999999999999999999999999999988777 55578999854 444221 111 11
Q ss_pred H-c---CCccEEEEccCCcc-----c-HHHHHHhhccCCEEEEEcCC-CCC--cccchhhhhc-CceeEee
Q 021300 244 A-M---GTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLVGAP-EKP--LELPAFSLLM-GEEEDSW 300 (314)
Q Consensus 244 ~-~---~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~G~~-~~~--~~~~~~~~~~-~~~~i~~ 300 (314)
. . +++|++|+|++.+. . .+.+++.++++|+++++|.. ++. .+++...++. +++++.+
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~G 311 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIG 311 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEE
Confidence 1 2 47999999999632 4 49999999999999999985 453 4555556665 7877764
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.09 E-value=2.1e-09 Score=99.76 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=94.8
Q ss_pred hhhh-HhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300 172 YSPL-RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 172 ~~~l-~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~ 250 (314)
+.++ +......+|++|+|+|.|++|+.+++.++.+|++|++++.++.+.. .++.+|++.+ +. .+...++|+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~-~~------~e~v~~aDV 260 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVM-TM------EEAVKEGDI 260 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEc-cH------HHHHcCCCE
Confidence 3444 3344457999999999999999999999999999999888877764 4467898543 11 133357999
Q ss_pred EEEccCCcccHHHH-HHhhccCCEEEEEcCCCCCcccchhhhhcCceeEeee
Q 021300 251 IIDTVSAVHPLMPL-IGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDSWW 301 (314)
Q Consensus 251 v~d~~g~~~~~~~~-~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~~~ 301 (314)
||+++|+...+... ++.++++|+++.+|.. +.+++...+..+.+++...
T Consensus 261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~ 310 (413)
T cd00401 261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNI 310 (413)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEc
Confidence 99999988877775 9999999999999975 5678888888888887643
No 131
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.66 E-value=5.2e-07 Score=84.20 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=84.9
Q ss_pred hhhhhhhHhcCCC-CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCC
Q 021300 169 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247 (314)
Q Consensus 169 ~ta~~~l~~~~~~-~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~ 247 (314)
..+|.++.+...+ ..|++++|+|.|.+|..+++.++.+|++|+++++++.+..++. ..|++. .+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~v-~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFRV-MT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCEe-cC------HHHHHhC
Confidence 3346666555333 4899999999999999999999999999999988877664443 446542 21 2234458
Q ss_pred ccEEEEccCCcccHH-HHHHhhccCCEEEEEcCCCCCcccchh
Q 021300 248 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAF 289 (314)
Q Consensus 248 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~~~~~~~~~~ 289 (314)
+|++|+++|+...+. ..+..|++++.++.+|......+++.+
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L 310 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVAAL 310 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccChHHH
Confidence 999999999877565 688999999999999997655555543
No 132
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.63 E-value=1.7e-06 Score=77.76 Aligned_cols=111 Identities=18% Similarity=0.253 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.|.+++|+|.|.+|+.+++.++.+|++|+++.+++++..++ +++|++.+ . .+.+.+....+|+||++++.....
T Consensus 150 l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~ 224 (296)
T PRK08306 150 IHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFNTIPALVLT 224 (296)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEECCChhhhh
Confidence 368999999999999999999999999999999998776444 67887643 1 233445566899999998766545
Q ss_pred HHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
...++.+++++.+++++..++...+. ....++.++.
T Consensus 225 ~~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~ 260 (296)
T PRK08306 225 KEVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKAL 260 (296)
T ss_pred HHHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEE
Confidence 67788899999999999887766653 3333444443
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.56 E-value=8.7e-07 Score=84.36 Aligned_cols=99 Identities=24% Similarity=0.322 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCC-C-------------HHH-------
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-D-------------QDE------- 240 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~-~-------------~~~------- 240 (314)
.++++++|+|+|.+|+++++.++.+|++|+++++++++. +.++++|++.+.... + .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rl-e~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999999999998866 455779987633221 1 111
Q ss_pred HHHHcCCccEEEEcc---CCcc---cHHHHHHhhccCCEEEEEcCCC
Q 021300 241 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+.+...++|++|+|+ |... .....++.|++|+.+++++...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 222335799999999 6533 5788899999999999998754
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.50 E-value=3.1e-08 Score=93.15 Aligned_cols=184 Identities=15% Similarity=0.245 Sum_probs=118.8
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (314)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (314)
.-|.|+++.+.+|++++++.-+| .+.+ ||.|..| ++.|.+.... |....+.|++++.+++ .
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~G-----E~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVG-----ETQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcC-----ChHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence 57999999999999998874444 4444 8888888 6667665432 3456788999998876 4
Q ss_pred eEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc
Q 021300 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL 227 (314)
Q Consensus 149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ 227 (314)
+..- ..++.. .++....+.-.+....+ ..++++++|+|+|.+|..+++.++..| .+++++.++.++..++++++
T Consensus 150 vr~~-t~i~~~---~vSv~~~Av~la~~~~~-~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 150 VRTE-TDISAG---AVSISSAAVELAERIFG-SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred hhhh-cCCCCC---CcCHHHHHHHHHHHHhC-CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 3321 112111 11111111112233333 367899999999999999999999999 58889999988877788888
Q ss_pred CCcEEecCCCHHHHHHHcCCccEEEEccCCcccH--HHHHHh-hccC-C--EEEEEcCC
Q 021300 228 GADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL--MPLIGL-LKSQ-G--KLVLVGAP 280 (314)
Q Consensus 228 ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~--~~~~~~-l~~~-G--~~v~~G~~ 280 (314)
|...+ .. +...+...++|+||.|++....+ ...+.. +... + .+++++.+
T Consensus 225 g~~~i-~~---~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~P 279 (417)
T TIGR01035 225 GGEAV-KF---EDLEEYLAEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVP 279 (417)
T ss_pred CCeEe-eH---HHHHHHHhhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCC
Confidence 87532 22 23334456899999999866432 122222 2221 2 56677754
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.46 E-value=3e-06 Score=78.46 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=77.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc---CC--
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SA-- 257 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~---g~-- 257 (314)
++.+++|+|+|.+|+.+++.++.+|++|+++++++++.+++.+.++........+++.+.+....+|++|+++ +.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 4566999999999999999999999999999999888777777777643334445556666667899999997 32
Q ss_pred cc-cHHHHHHhhccCCEEEEEcCCC
Q 021300 258 VH-PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 258 ~~-~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.. .....++.+++++.++.++...
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCC
Confidence 11 2477888899999999998754
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.39 E-value=4.5e-06 Score=77.54 Aligned_cols=103 Identities=20% Similarity=0.157 Sum_probs=78.0
Q ss_pred hhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300 172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 172 ~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~ 250 (314)
+.++.+. .....|++|+|+|.|.+|+.+++.++.+|++|+++..++.+..++ ...|+.. ++. .+...+.|+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~v-~~l------eeal~~aDV 253 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFRV-MTM------EEAAKIGDI 253 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCEe-CCH------HHHHhcCCE
Confidence 3444333 334789999999999999999999999999999998888765444 4557632 211 123357899
Q ss_pred EEEccCCcccHHH-HHHhhccCCEEEEEcCCCC
Q 021300 251 IIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 251 v~d~~g~~~~~~~-~~~~l~~~G~~v~~G~~~~ 282 (314)
+|+++|+...+.. .+..+++++.++.+|....
T Consensus 254 VItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 254 FITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 9999998876664 8889999999999998643
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.36 E-value=5e-06 Score=78.03 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=81.3
Q ss_pred hhhhHhc-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300 172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 172 ~~~l~~~-~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~ 250 (314)
+.++.+. .....|++++|+|.|.+|..+++.++.+|++|+++.+++.+..++ ...|+..+ + +.+....+|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec-c------HHHHHhhCCE
Confidence 4444333 334789999999999999999999999999999988887665444 35576532 1 1233456899
Q ss_pred EEEccCCccc-HHHHHHhhccCCEEEEEcCCCCCcccch
Q 021300 251 IIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPEKPLELPA 288 (314)
Q Consensus 251 v~d~~g~~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~ 288 (314)
++.++|+... ....++.|++++.++.+|.....++...
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~a 351 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLG 351 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHH
Confidence 9999998765 4889999999999999999654444433
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.22 E-value=5.8e-06 Score=74.89 Aligned_cols=129 Identities=20% Similarity=0.250 Sum_probs=87.7
Q ss_pred CceEECCCCCCcccccccchhhhhhhhhhHhcCCC---CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHH
Q 021300 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE 222 (314)
Q Consensus 147 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~ 222 (314)
...+++|+.+..+.++... +...++.++...... .++.+|+|+|+|.+|..+++.++..|+ +++++.+++++..+
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4666788888888776432 345555566444421 479999999999999999999998775 78888888888888
Q ss_pred HHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhc--c-CC-EEEEEcCC
Q 021300 223 AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLK--S-QG-KLVLVGAP 280 (314)
Q Consensus 223 ~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~--~-~G-~~v~~G~~ 280 (314)
+++++|++. ++. +...+....+|+||.+++...........++ + .+ .++.++.+
T Consensus 218 la~~~g~~~-~~~---~~~~~~l~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavP 275 (311)
T cd05213 218 LAKELGGNA-VPL---DELLELLNEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVP 275 (311)
T ss_pred HHHHcCCeE-EeH---HHHHHHHhcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 999999843 222 2233444579999999998764122222222 1 22 46677765
No 139
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.18 E-value=5.6e-05 Score=67.54 Aligned_cols=100 Identities=18% Similarity=0.292 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.|++++|+|.|.+|.++++.++.+|++|+++.+++++..++ .++|...+ . .+.+.+....+|+|++++......
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence 368999999999999999999999999999999988766554 45565432 1 233445566899999998755333
Q ss_pred HHHHHhhccCCEEEEEcCCCCCccc
Q 021300 262 MPLIGLLKSQGKLVLVGAPEKPLEL 286 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~~~~~~~ 286 (314)
...++.++++..++.++..++..+|
T Consensus 224 ~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 5677888999999999987776666
No 140
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.13 E-value=4.8e-05 Score=65.06 Aligned_cols=111 Identities=15% Similarity=0.284 Sum_probs=81.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEEecCCCHHH----HHHH---cCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDE----MQAA---MGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~~v~~~~~~~----~~~~---~~~~d~ 250 (314)
.++.++|.|+ +++|.+.++.+...|++++.+.|..+++++++.+++. -..+|-.+.+. +..+ .+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 3477888998 9999999999999999999999999999999999993 23345555543 2222 236999
Q ss_pred EEEccCCc-------------------------ccHHHHHHhh--ccCCEEEEEcCCCCCcccchhhhhc
Q 021300 251 IIDTVSAV-------------------------HPLMPLIGLL--KSQGKLVLVGAPEKPLELPAFSLLM 293 (314)
Q Consensus 251 v~d~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~ 293 (314)
.+++.|.. ......+..| +..|.++.+|+-.+...++...+|.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ 154 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYG 154 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccch
Confidence 99999843 1233344444 4578999999977766666655443
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.13 E-value=1.9e-05 Score=69.32 Aligned_cols=131 Identities=24% Similarity=0.306 Sum_probs=82.7
Q ss_pred cceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (314)
Q Consensus 138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~ 216 (314)
|.+|.. +...++.++++++|..+. .+.+.. ....+... ++++++||-+|+|. |..++.+++ .|+ +++.++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 445544 667889999999888765 211111 12222222 47899999999987 888776655 566 59999999
Q ss_pred hhhHHHHHHHc---CC-cEEecCCCHHHHHHHcCCccEEEEccCCc---ccHHHHHHhhccCCEEEEEcCCCC
Q 021300 217 PSKKSEAIERL---GA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 217 ~~~~~~~~~~~---ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+...+.+.+.+ +. +.+..... ...||+|+-+.... ..+..+.+.|+++|++++.|....
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~~-------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~~ 217 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQG-------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILEE 217 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEccC-------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcHh
Confidence 87765554332 22 11111000 01599998766533 235678888999999999887543
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=98.09 E-value=3.4e-05 Score=77.36 Aligned_cols=133 Identities=20% Similarity=0.218 Sum_probs=89.7
Q ss_pred cccceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEE
Q 021300 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTV 212 (314)
Q Consensus 136 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~ 212 (314)
-++++|..+++..++.+ +..+.+++.. .+. ....+|+++||.|+ |++|..+++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l------------~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKL------------QRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhh------------hcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 34577777777666666 5666666541 111 11246899999997 99999999999999999999
Q ss_pred EeCChhhHHHHHHHcCC--c---EEecCCCHHHHHHH-------cCCccEEEEccCCc----------------------
Q 021300 213 ISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMDGIIDTVSAV---------------------- 258 (314)
Q Consensus 213 v~~~~~~~~~~~~~~ga--~---~~v~~~~~~~~~~~-------~~~~d~v~d~~g~~---------------------- 258 (314)
++++.++...+.+.++. . ...|-.+++.+.+. .+++|++|+++|..
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99998877777666653 1 12244454433322 24799999999831
Q ss_pred ---ccHHHHHHhhcc---CCEEEEEcCCC
Q 021300 259 ---HPLMPLIGLLKS---QGKLVLVGAPE 281 (314)
Q Consensus 259 ---~~~~~~~~~l~~---~G~~v~~G~~~ 281 (314)
..++.+++.+++ +|+++.+++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 123344666655 68999998753
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.08 E-value=3.4e-05 Score=72.71 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=75.1
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
+..-.|.+++|+|.|.+|..+++.++.+|++|+++.+++.+..++. ..|+..+ .+.++...+|+++.++|..
T Consensus 249 ~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~~ADIVI~atGt~ 320 (476)
T PTZ00075 249 DVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVETADIFVTATGNK 320 (476)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHhcCCEEEECCCcc
Confidence 4456899999999999999999999999999998888776553432 3465432 1234456799999999987
Q ss_pred ccHH-HHHHhhccCCEEEEEcCCC
Q 021300 259 HPLM-PLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 259 ~~~~-~~~~~l~~~G~~v~~G~~~ 281 (314)
..+. ..++.|++++.++.+|...
T Consensus 321 ~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 321 DIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred cccCHHHHhccCCCcEEEEcCCCc
Confidence 7664 8999999999999999874
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.07 E-value=4.9e-06 Score=81.59 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh--------------------hhHHHHHHHcCCcEEecCCC-HH
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP--------------------SKKSEAIERLGADSFLVSRD-QD 239 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~--------------------~~~~~~~~~~ga~~~v~~~~-~~ 239 (314)
.++|++|+|+|+|++|+++++.++..|++|++++..+ +...+.++++|++..++... .+
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED 213 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence 5789999999999999999999999999998887431 22334556789877666433 22
Q ss_pred -HHHHHcCCccEEEEccCCcc
Q 021300 240 -EMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 240 -~~~~~~~~~d~v~d~~g~~~ 259 (314)
.......++|.||+++|...
T Consensus 214 ~~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 214 ITLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred CCHHHHHhhCCEEEEeeCCCC
Confidence 12233457999999999653
No 145
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.00 E-value=1.6e-05 Score=62.95 Aligned_cols=96 Identities=20% Similarity=0.345 Sum_probs=68.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
-.+.+++|+|+|+.|.+++..+...|++ ++++.|+.++.+++.++++.. .++...+ +.+....+|++|.+++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 4689999999999999999999999995 999999999999999998533 2333333 224455799999999865
Q ss_pred cc--HHHHHHhhcc-CCEEEEEcCC
Q 021300 259 HP--LMPLIGLLKS-QGKLVLVGAP 280 (314)
Q Consensus 259 ~~--~~~~~~~l~~-~G~~v~~G~~ 280 (314)
.. ....+....+ -+.+++++.+
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CcccCHHHHHHHHhhhhceeccccC
Confidence 31 2223332222 2688999865
No 146
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.00028 Score=59.29 Aligned_cols=96 Identities=29% Similarity=0.347 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
.+++|++||=+|+|+ |+.++-+++..+ +|+.+.+.++=.+.+ .+.+|...+ +...|-..=......||.++-+.
T Consensus 69 ~~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~Vta 146 (209)
T COG2518 69 ELKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRIIVTA 146 (209)
T ss_pred CCCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEEEee
Confidence 379999999999875 999999999888 999998887632222 467787433 33333111111123699999998
Q ss_pred CCcccHHHHHHhhccCCEEEEE
Q 021300 256 SAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
+........++.|++||+++.-
T Consensus 147 aa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 147 AAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred ccCCCCHHHHHhcccCCEEEEE
Confidence 8887789999999999998876
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.76 E-value=0.00017 Score=68.12 Aligned_cols=160 Identities=21% Similarity=0.247 Sum_probs=101.4
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEecccccCCCCCccccCCCCCCCCccccccccccCCCCccCcccceEEeecCCc
Q 021300 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (314)
Q Consensus 69 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (314)
.-|+|+++.+.+|++++.+.-+|+.-+ ||.|. +-++.|.+... .+....+.|++.+.+++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI-------lgQvk----~a~~~a~~~g~-------~g~~l~~lf~~a~~~~k-- 150 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI-------LGQVK----DAYALAQEAGT-------VGTILNRLFQKAFSVAK-- 150 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH-------HHHHH----HHHHHHHHcCC-------chHHHHHHHHHHHHHHh--
Confidence 469999999999999988755565432 22222 22333332211 12234556666555443
Q ss_pred eEECCCCCCcccccccchhhhhhhhhhHhcCC---CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (314)
Q Consensus 149 ~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~ 224 (314)
.+..+.+. ...+...++.++..... -.++.+++|+|+|.+|.++++.++..|+ +++++.+++++...++
T Consensus 151 ------~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 151 ------RVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred ------hHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 22222221 11123444445543321 2678999999999999999999999997 7888999988888888
Q ss_pred HHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300 225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 225 ~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
+++|.+ +++. +...+...++|+||.+++...
T Consensus 224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPH 254 (423)
T ss_pred HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence 888864 2322 233344467999999998754
No 148
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.75 E-value=0.00014 Score=64.55 Aligned_cols=100 Identities=22% Similarity=0.294 Sum_probs=66.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d 253 (314)
.+++|++||.+|+|. |..+.++++..+. +++.++.+++..+.+.+ .++.+.+ +...+...+....+.||+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 478999999999987 8888888887765 68899988877655533 2343222 111221111111246999886
Q ss_pred cc------CCcccHHHHHHhhccCCEEEEEcCC
Q 021300 254 TV------SAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 254 ~~------g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.. .....+..+.+.|++||++++.+..
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 53 1234588999999999999997654
No 149
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.75 E-value=0.00039 Score=60.92 Aligned_cols=114 Identities=11% Similarity=0.195 Sum_probs=80.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-----E--ecCCCHHHHHHHc----C---
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-----F--LVSRDQDEMQAAM----G--- 246 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-----~--v~~~~~~~~~~~~----~--- 246 (314)
..+.++||.|| +++|...+..+...|.+++++.|+.++.+++.+++.-.. + +|-.+++.+.++. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999998 999999999999999999999999999988888776321 2 2444554444332 2
Q ss_pred CccEEEEccCCcc-------------------------cHHHHHHhhc--cCCEEEEEcCCCCCcccchhhhhcCc
Q 021300 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEKPLELPAFSLLMGE 295 (314)
Q Consensus 247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~~~~~~ 295 (314)
.+|+.++++|-.. .....+..|. ..|.++.+|+..+..+.|...++.-.
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~AT 159 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSAT 159 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHH
Confidence 5999999998320 1122333332 35899999998777777766554433
No 150
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.73 E-value=0.00076 Score=54.49 Aligned_cols=104 Identities=19% Similarity=0.249 Sum_probs=71.7
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
.....-.|.+++|+|-|-+|.-.++.++.+|++|++++.+|-+..++. .-|.+.. .+.+.....|++|-++|
T Consensus 16 ~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG 87 (162)
T PF00670_consen 16 ATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATG 87 (162)
T ss_dssp HH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SS
T ss_pred cCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCC
Confidence 344457899999999999999999999999999999999997766653 3365432 24456678999999999
Q ss_pred Cccc-HHHHHHhhccCCEEEEEcCCCCCcccch
Q 021300 257 AVHP-LMPLIGLLKSQGKLVLVGAPEKPLELPA 288 (314)
Q Consensus 257 ~~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~ 288 (314)
.... -...+..|+.+-.+..+|......+++.
T Consensus 88 ~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~ 120 (162)
T PF00670_consen 88 NKDVITGEHFRQMKDGAILANAGHFDVEIDVDA 120 (162)
T ss_dssp SSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHH
T ss_pred CccccCHHHHHHhcCCeEEeccCcCceeEeecc
Confidence 8764 4678899999988888888665555544
No 151
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.73 E-value=0.00051 Score=66.45 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=73.7
Q ss_pred cCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--------CC------c-EEecCCCHHHH
Q 021300 178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GA------D-SFLVSRDQDEM 241 (314)
Q Consensus 178 ~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--------ga------~-~~v~~~~~~~~ 241 (314)
..+.+.|.++||.|+ |.+|...++.+...|++|++++++.++...+.+.+ |. . ...|-.+.+.+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 334689999999998 99999999999889999999999988766554322 21 1 12355666677
Q ss_pred HHHcCCccEEEEccCCcc---------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVH---------------PLMPLIGLLKS--QGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~---------------~~~~~~~~l~~--~G~~v~~G~~~ 281 (314)
.+..+++|+||.++|... ....+++.+.. .++||.++...
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 777788999999987531 12334444433 36899998754
No 152
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.00033 Score=61.80 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=81.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEcc--CCc--
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV--SAV-- 258 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~--g~~-- 258 (314)
+..+|.|+|+|.+|.-++.+|..+|++|.+.+.+.+|.+.+-..|+.+.-.-++.+..+.+...+.|++|.++ ++.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 3456778899999999999999999999999999999988877788765556778888888888999999875 211
Q ss_pred --ccHHHHHHhhccCCEEEEEcCC
Q 021300 259 --HPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 259 --~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
-+....++.|+|++.++++...
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEEc
Confidence 2467789999999999999764
No 153
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.66 E-value=0.00057 Score=56.52 Aligned_cols=92 Identities=25% Similarity=0.318 Sum_probs=70.4
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCCc----cc
Q 021300 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV----HP 260 (314)
Q Consensus 187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~~----~~ 260 (314)
|+|+|+ |.+|...++.+...|.+|++++|++++..+ ..+.+.+ .|..+++.+.+...++|.||.+.|.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999987755 3344433 35677778888888999999999842 23
Q ss_pred HHHHHHhhccCC--EEEEEcCCC
Q 021300 261 LMPLIGLLKSQG--KLVLVGAPE 281 (314)
Q Consensus 261 ~~~~~~~l~~~G--~~v~~G~~~ 281 (314)
....++.++..| +++.++...
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccceeeeccc
Confidence 556666665544 788776543
No 154
>PRK12742 oxidoreductase; Provisional
Probab=97.59 E-value=0.0012 Score=56.77 Aligned_cols=99 Identities=19% Similarity=0.284 Sum_probs=67.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHcCCcEE-ecCCCHHHHHHH---cCCccEEEEccC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS 256 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~---~~~~d~v~d~~g 256 (314)
++.++||.|+ |++|...++.+...|++++++.+ .+++.+++.++++...+ .|..+.+.+.+. .+.+|++|+++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4689999997 99999999999999999887765 44555566666665543 344454443332 246999999987
Q ss_pred Ccc-------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 257 AVH-------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 257 ~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
... ....++..++.+|+++.+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 421 0123344556689999987754
No 155
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.55 E-value=0.00086 Score=59.27 Aligned_cols=113 Identities=17% Similarity=0.297 Sum_probs=77.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcC-Cc-EEe---cCCCHHH-------HHHHc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLG-AD-SFL---VSRDQDE-------MQAAM 245 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~g-a~-~~v---~~~~~~~-------~~~~~ 245 (314)
..|.+|+|.|| +++|.+.+.-....|++++.+++..++.++..+ +.+ .+ ..+ |-.+.+. +....
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 46788999998 999998888888899999888888776655422 333 33 222 2333332 23344
Q ss_pred CCccEEEEccCCc-------------------------ccHHHHHHhhccC--CEEEEEcCCCCCcccchhhhhcC
Q 021300 246 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKSQ--GKLVLVGAPEKPLELPAFSLLMG 294 (314)
Q Consensus 246 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~G~~~~~~~~~~~~~~~~ 294 (314)
+++|+.+++.|-. .....+++.|++. |+|+.+++-.+...+|...++.-
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A 165 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA 165 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch
Confidence 6899999998822 2345577777543 99999999888777777654443
No 156
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0012 Score=61.06 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=75.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC--C-cEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g--a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
.++||+|+|.+|+.+++.+...+ .+|++.+|+.++..++....+ . ...+|-.+.+.+.++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 47899999999999999988888 799999999998888865532 2 3456778888888888888999999987654
Q ss_pred HHHHHHhhccCCEEEEEcCCCCC
Q 021300 261 LMPLIGLLKSQGKLVLVGAPEKP 283 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~~G~~~~~ 283 (314)
+..+-.+++.+=-+++......+
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCch
Confidence 54444555666567776655443
No 157
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.52 E-value=0.0018 Score=54.64 Aligned_cols=99 Identities=16% Similarity=0.217 Sum_probs=68.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHH---HHHcC-CcE--EecCCCHHHHHHHcCCccEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLG-ADS--FLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~---~~~~g-a~~--~v~~~~~~~~~~~~~~~d~v 251 (314)
.+.+++++|-+|+|. |.+++.+++..+ .+++.++.+++..+.+ .+.++ .+. ++..+..+.+....+.+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 378999999999987 888899888754 5899999998766543 23456 322 22222234444445689999
Q ss_pred EEccCCc---ccHHHHHHhhccCCEEEEEcC
Q 021300 252 IDTVSAV---HPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 252 ~d~~g~~---~~~~~~~~~l~~~G~~v~~G~ 279 (314)
|...+.. ..+..+.+.|+++|+++..-.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVIDAI 146 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEEEee
Confidence 9865432 246677888999999986433
No 158
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0026 Score=57.14 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=57.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEE---ecCCCHHHHHHH-------cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~---v~~~~~~~~~~~-------~~~~d 249 (314)
.|.++||.|+ |++|..+++.+...|++|+++.++.++.+++.++++. +.. .|-.+.+.+... .+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999999999999999998888777777752 222 344554433222 25799
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 159
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.51 E-value=0.0015 Score=56.26 Aligned_cols=99 Identities=22% Similarity=0.345 Sum_probs=68.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEE--ecCCCHHHHHHH-------cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSF--LVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~~--v~~~~~~~~~~~-------~~~~d 249 (314)
++++++|.|+ |.+|..+++.+...|++|+++++++++..++.+++.. ... .|-.+++.+.+. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999997 9999999999999999999999998877665444321 121 233444332221 24689
Q ss_pred EEEEccCCcc-----------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 250 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 250 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.++.+.+... .++..++.++++|+++.+++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999887421 1344556667789999998754
No 160
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.50 E-value=0.001 Score=55.73 Aligned_cols=111 Identities=19% Similarity=0.206 Sum_probs=79.1
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHc--------CCccE
Q 021300 182 KPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAM--------GTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Ga--g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~--------~~~d~ 250 (314)
.....|||.|+ |++|.+.+.-....|+.|+++.|.-++...+..++|.. .-+|-.+++.+.+.. ++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 45577899874 99999988888888999999999999998998888853 234555554433322 36899
Q ss_pred EEEccCCccc------------------------HHH--HHHhhccCCEEEEEcCCCCCcccchhhhh
Q 021300 251 IIDTVSAVHP------------------------LMP--LIGLLKSQGKLVLVGAPEKPLELPAFSLL 292 (314)
Q Consensus 251 v~d~~g~~~~------------------------~~~--~~~~l~~~G~~v~~G~~~~~~~~~~~~~~ 292 (314)
.++++|..-+ +.. ...+++..|++|.+|+..+-.++|...++
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iY 152 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIY 152 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhh
Confidence 9998884310 111 23355889999999998766666664433
No 161
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.47 E-value=0.00066 Score=56.31 Aligned_cols=109 Identities=18% Similarity=0.259 Sum_probs=71.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc---
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 258 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~--- 258 (314)
-.|.+|.|+|.|.+|...++.++.+|++|+++.+........ ...+... . .+.++....|+|+.+....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~~----~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVEY----V---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEEE----S---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-cccccee----e---ehhhhcchhhhhhhhhcccccc
Confidence 578999999999999999999999999999999998755322 3444321 1 2223444589988887621
Q ss_pred --ccHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 259 --HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 259 --~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
..-...+..|+++..+|.++.. +-++-+...-.+++.++.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG-~~vde~aL~~aL~~g~i~ 147 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARG-ELVDEDALLDALESGKIA 147 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSG-GGB-HHHHHHHHHTTSEE
T ss_pred ceeeeeeeeeccccceEEEeccch-hhhhhhHHHHHHhhccCc
Confidence 1245678899999999998873 223333333333444444
No 162
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.47 E-value=0.00086 Score=50.66 Aligned_cols=94 Identities=28% Similarity=0.336 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHc---C--CcEEecCCCHHHHHHHcCCccEEEEcc-
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERL---G--ADSFLVSRDQDEMQAAMGTMDGIIDTV- 255 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~-~~g~~vi~v~~~~~~~~~~~~~~---g--a~~~v~~~~~~~~~~~~~~~d~v~d~~- 255 (314)
||.+||-+|+|. |..++.+++ ..+++++.++.+++..+.+.+.. + ...-+...+........+.||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 688999999875 778888888 46889999999998876666655 2 122222233222223344799999877
Q ss_pred CCc---------ccHHHHHHhhccCCEEEEE
Q 021300 256 SAV---------HPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 256 g~~---------~~~~~~~~~l~~~G~~v~~ 277 (314)
... ..+..+.+.|+|+|+++.-
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1267788999999998863
No 163
>PRK06182 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.0027 Score=56.15 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
++.+++|.|+ |.+|...++.+...|++|+++.++.++..++. ..+...+ .|-.+++.+.+. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999997 99999999999889999999999987765553 3344332 355555443332 247999999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9884
No 164
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.43 E-value=0.0019 Score=57.87 Aligned_cols=98 Identities=27% Similarity=0.253 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHc---CCc-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~---ga~-~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
.++|++||-+|+|. |..++.+++ .|+ +++.++.++...+.+.+.. +.. .+..... +......++||+|+.+.
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEec
Confidence 46889999999987 877777666 455 8999999887664443322 221 1111111 11112235799999765
Q ss_pred CCc---ccHHHHHHhhccCCEEEEEcCCC
Q 021300 256 SAV---HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 256 g~~---~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
... ..+..+.+.|+++|.++..|...
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 432 23566788999999999988653
No 165
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.43 E-value=0.0018 Score=57.52 Aligned_cols=96 Identities=18% Similarity=0.290 Sum_probs=73.6
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....+++...--.|.+++|+|.|. +|.-++.++...|++|++..+... .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 46777777777777665446899999999855 999999999999999988765431 22
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+||-++|.+..+.. +.++++-.++.+|.+.
T Consensus 196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 3445669999999998864444 4688999999999865
No 166
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0026 Score=55.85 Aligned_cols=99 Identities=16% Similarity=0.197 Sum_probs=68.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v 251 (314)
.+.++||.|+ |.+|...++.+...|++|+++.++.++.+++.++++.... .|-.+.+.+.++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999997 9999999999999999999999998777777777664321 244444333222 2468999
Q ss_pred EEccCCcc------------------------cHHHHHHhh-ccCCEEEEEcCCC
Q 021300 252 IDTVSAVH------------------------PLMPLIGLL-KSQGKLVLVGAPE 281 (314)
Q Consensus 252 ~d~~g~~~------------------------~~~~~~~~l-~~~G~~v~~G~~~ 281 (314)
+.+.|... ..+.+++.| +.+|+++.+++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 99987420 122233444 5678999998753
No 167
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0033 Score=57.48 Aligned_cols=75 Identities=21% Similarity=0.353 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |++|.+.++.+...|++|+++.+++++.+++.++ .|.+.. .|-.+++.+.++ .+.+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 9999999999999999999999998877655443 354432 245555444433 2579
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999983
No 168
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.39 E-value=0.00087 Score=55.83 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=57.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcEEecCCCHHHHHHH----c---CCccEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQDEMQAA----M---GTMDGII 252 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~~v~~~~~~~~~~~----~---~~~d~v~ 252 (314)
-|.+|||.|+ +++|+..++-...+|-+||+..|++++..+...... ...+.|-.|.+.++++ . ...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999875 999999999999999999999999999988866655 2455566665533333 2 3589999
Q ss_pred EccC
Q 021300 253 DTVS 256 (314)
Q Consensus 253 d~~g 256 (314)
+++|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 9988
No 169
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0038 Score=54.08 Aligned_cols=75 Identities=20% Similarity=0.316 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHH-------HHHcCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEM-------QAAMGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~-------~~~~~~~d~v 251 (314)
++.+++|.|+ |.+|...++.+...|++++++.++.+...++.++++.+.. .|..+.+.+ .+..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999997 9999999999999999999999987777777677775422 233333322 2223479999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 170
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0043 Score=56.80 Aligned_cols=100 Identities=17% Similarity=0.313 Sum_probs=68.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.+++|.|+ |++|..+++.+...|++|+++.+++++.+++.++ .|.+.. .|-.+++.+.++ .+.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999997 9999999999999999999999988766555443 354332 344555433332 2479
Q ss_pred cEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300 249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK 282 (314)
Q Consensus 249 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~ 282 (314)
|++|+++|... ....+++.+++ .|+++.+++..+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 99999988421 12234555644 589999987543
No 171
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.33 E-value=0.0044 Score=52.05 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=65.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----CcE-EecCCCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~~-~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
..+.+++|+|+ |.+|..++..+...|++++++.++.++.+++.+.+. ... ..+..+.+.+.+...++|+||.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 46789999997 999998888888889999999999887777766543 221 223445555555667899999988
Q ss_pred CCcccHHHHHH-hhccCCEEEEEcCC
Q 021300 256 SAVHPLMPLIG-LLKSQGKLVLVGAP 280 (314)
Q Consensus 256 g~~~~~~~~~~-~l~~~G~~v~~G~~ 280 (314)
........... ..+++-.++++..+
T Consensus 106 ~~g~~~~~~~~~~~~~~~vv~D~~~~ 131 (194)
T cd01078 106 AAGVELLEKLAWAPKPLAVAADVNAV 131 (194)
T ss_pred CCCceechhhhcccCceeEEEEccCC
Confidence 75532112222 22333346666554
No 172
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.30 E-value=0.003 Score=50.75 Aligned_cols=98 Identities=22% Similarity=0.249 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
..+.+++|+|+|.+|...++.+...| .+++++.++.++.+++.++++... .....+ ..+..+++|+|+.+++...
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVGM 93 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCCC
Confidence 45788999999999999999888886 688889999888888777777531 011112 1233567999999987653
Q ss_pred c----HHHHHHhhccCCEEEEEcCCCC
Q 021300 260 P----LMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 260 ~----~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
. .......++++..++.++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~v~D~~~~~~ 120 (155)
T cd01065 94 KPGDELPLPPSLLKPGGVVYDVVYNPL 120 (155)
T ss_pred CCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence 1 1122345678888888876543
No 173
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0069 Score=53.34 Aligned_cols=99 Identities=13% Similarity=0.214 Sum_probs=67.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE---EecCCCHHHHHHH------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~---~v~~~~~~~~~~~------~~~~ 248 (314)
.|.++||.|+ +++|.+.++.+...|++|+++.++.++.+++.+++ +.+. ..|-.+++.+.++ .+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4788999987 99999999999999999999999887766655443 3221 1244444333222 1469
Q ss_pred cEEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300 249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE 281 (314)
Q Consensus 249 d~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~ 281 (314)
|+++.+.|... ....+++.|+. .|+++.+++..
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 99999987421 13345556643 48999998754
No 174
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0068 Score=53.56 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEEcc
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 255 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d~~ 255 (314)
.++||.|+ |++|...++.+...|++|++++++.++..++. ..+...+ .|..+.+.+.++ .+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 46889987 99999999999989999999999887665553 3454433 355555433322 24699999999
Q ss_pred CC
Q 021300 256 SA 257 (314)
Q Consensus 256 g~ 257 (314)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 175
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.26 E-value=0.0052 Score=50.39 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=67.7
Q ss_pred cccchhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
...|+...++...++....--.|.+++|+|+|. +|..++..++..|++++++.+..+ .
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~ 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------N 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------h
Confidence 344555555555555554346899999999986 599899999999998888777632 1
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+.+....+|+||-+++....+.. +.++++-.++.++.+.
T Consensus 81 l~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 81 LKEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 22344568999999988663333 3467777788888864
No 176
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0058 Score=54.21 Aligned_cols=99 Identities=14% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---c-CCccEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---M-GTMDGII 252 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~-~~~d~v~ 252 (314)
.+.++||.|+ |++|...++.+...|++|+++++++++..++. ..+.+.+ .|-.+.+.+. +. . +.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999998 99999999998889999999999988776664 3454433 3555543322 22 1 3689999
Q ss_pred EccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCCC
Q 021300 253 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK 282 (314)
Q Consensus 253 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~ 282 (314)
++.|... ....+++.+++ .|+++.+++..+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 9986321 02345555643 478999977543
No 177
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.24 E-value=0.00093 Score=56.82 Aligned_cols=98 Identities=32% Similarity=0.383 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHH---HHHcCCc-EEecCCCHHHHHHHcCCccEEEEc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGAD-SFLVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~---~~~~ga~-~~v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
+++|++||-+|+|. |+.++-+++..|. +|+.+.+.++-.+.+ .++++.+ ..+...+...-......||.++-+
T Consensus 70 l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~v~ 148 (209)
T PF01135_consen 70 LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRIIVT 148 (209)
T ss_dssp C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEEES
T ss_pred cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEEEe
Confidence 89999999999875 8888888888764 688888887643333 3445553 223333322111223479999998
Q ss_pred cCCcccHHHHHHhhccCCEEEEE-cC
Q 021300 255 VSAVHPLMPLIGLLKSQGKLVLV-GA 279 (314)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~-G~ 279 (314)
.+........++.|++||+++.. +.
T Consensus 149 ~a~~~ip~~l~~qL~~gGrLV~pi~~ 174 (209)
T PF01135_consen 149 AAVPEIPEALLEQLKPGGRLVAPIGQ 174 (209)
T ss_dssp SBBSS--HHHHHTEEEEEEEEEEESS
T ss_pred eccchHHHHHHHhcCCCcEEEEEEcc
Confidence 88777678899999999999985 44
No 178
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.24 E-value=0.0062 Score=51.68 Aligned_cols=113 Identities=16% Similarity=0.060 Sum_probs=72.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
.|.+|||+|+|.+|...++.+...|++|+++..... ...++.+ .|- ......+.+ .....++++||-++++...-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~-i~~~~~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGG-ITWLARCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCC-EEEEeCCCC--HHHhCCcEEEEECCCCHHHH
Confidence 467999999999999999999999999998877643 3344433 332 111122211 12235799999999988645
Q ss_pred HHHHHhhccCCEEEEEcCCCCCcccchhhhhcC-ceeEe
Q 021300 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-EEEDS 299 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~ 299 (314)
.......+..|..+.+...+...+|-...+..+ .++|.
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~ia 122 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVA 122 (205)
T ss_pred HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEE
Confidence 556666667788777655444444444444443 34444
No 179
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0071 Score=53.40 Aligned_cols=74 Identities=22% Similarity=0.356 Sum_probs=54.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHH-------HHcCCccEEEE
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGIID 253 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~-------~~~~~~d~v~d 253 (314)
+.++||.|+ |++|...++.+...|++++++.+++++..++.++++ ... ..|-.+++.+. +..+++|+++.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999998 999999999888899999999999887777766665 322 23445554322 22347999999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
+.|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9874
No 180
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.21 E-value=0.0045 Score=57.73 Aligned_cols=111 Identities=25% Similarity=0.209 Sum_probs=72.7
Q ss_pred cchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEEecCCCHHHHH
Q 021300 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQ 242 (314)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~v~~~~~~~~~ 242 (314)
+..+-...+..+.....+++|++||-+|+| .|..+..+++..|++|+.++.+++..+.+.+.... ..-+...+. .
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~---~ 223 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---R 223 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch---h
Confidence 333444445544444457999999999986 47778888888899999999999887666554321 111111221 2
Q ss_pred HHcCCccEEEE-----ccCC---cccHHHHHHhhccCCEEEEEc
Q 021300 243 AAMGTMDGIID-----TVSA---VHPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 243 ~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~G~~v~~G 278 (314)
...+.||.|+. .+|. ...+..+.+.|+|+|++++..
T Consensus 224 ~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 DLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 23457998864 3343 234778888999999988753
No 181
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.21 E-value=0.0029 Score=56.41 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
..+.+++|+|+|++|.+++..++..| .+++++.|+.++.+++.++++....+.. +.+ ..+....+|+|++++.....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE-LQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc-chhccccCCEEEECCcCCCC
Confidence 46788999999999999999999999 5899999999888888777653210111 001 11233579999999864321
Q ss_pred -----HHHHHHhhccCCEEEEEcCCC
Q 021300 261 -----LMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 261 -----~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.......++++..++++-..+
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~DivY~P 224 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMIYGP 224 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEeecCC
Confidence 112345677788888885533
No 182
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0099 Score=51.45 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
++.+++|.|+ |.+|...+..+...|++++++.+++++..++.+++ +.+. ..|-.+++.+.++ .+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999999989999999988877665554433 3222 2244555433332 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 183
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.19 E-value=0.0062 Score=58.04 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC--hhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~--~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~ 250 (314)
.+|.++||.|+ |++|...++.+...|++++++.+. .+...++.++++...+ .|-.+++.+.++ .+++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35789999997 999999999999999999988774 3344555556665432 355555433322 236899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
+|++.|.
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9999983
No 184
>PRK06484 short chain dehydrogenase; Validated
Probab=97.18 E-value=0.0075 Score=58.55 Aligned_cols=101 Identities=18% Similarity=0.271 Sum_probs=72.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~ 250 (314)
..|.++||.|+ +++|...++.+...|++|+++.+++++.+++.++++.+. ..|-.+++.+.++ .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46788999987 999999999999999999999999888877777776432 2344554433322 246999
Q ss_pred EEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 251 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 251 v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+|.++|... ..+.++..|+.+|+++.+++..+
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 999987420 12334455666799999987543
No 185
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.18 E-value=0.0081 Score=49.55 Aligned_cols=100 Identities=20% Similarity=0.245 Sum_probs=70.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHH---HHHHcCCcE--EecCCCHHHHHHHcCCccEEEEc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSE---AIERLGADS--FLVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~---~~~~~ga~~--~v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
+++|+.++=+|+|. |..++++++.. ..+++++++++++.+. -+++||.+. ++.-..|+.+..+. .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 79999888788854 66777888544 4599999998876533 356788763 34444456555433 79999964
Q ss_pred cCC--cccHHHHHHhhccCCEEEEEcCCCC
Q 021300 255 VSA--VHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 255 ~g~--~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
-|. ...++.++..|+++|++|.-..+-+
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~naitlE 139 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAITLE 139 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEeecHH
Confidence 442 2357889999999999999887633
No 186
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.011 Score=52.30 Aligned_cols=74 Identities=19% Similarity=0.244 Sum_probs=53.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEEE
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGII 252 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v~ 252 (314)
+.++||.|+ |.+|...++.+...|++|+++++++++...+.+..+... ..|-.+++.+.+. .+.+|+++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 567999997 999999999998899999999999887766655444222 2244454433322 23689999
Q ss_pred EccCC
Q 021300 253 DTVSA 257 (314)
Q Consensus 253 d~~g~ 257 (314)
.+.|.
T Consensus 84 ~~ag~ 88 (277)
T PRK06180 84 NNAGY 88 (277)
T ss_pred ECCCc
Confidence 99885
No 187
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.13 E-value=0.0041 Score=55.73 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCh---hhHHHHHHHcCC---c---EEecCCCHHHHHHHcCCccEE
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAIERLGA---D---SFLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~-vi~v~~~~---~~~~~~~~~~ga---~---~~v~~~~~~~~~~~~~~~d~v 251 (314)
..+.+++|+|+|++|.+++..+...|++ ++++.|+. ++.+++.+++.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4578899999999999999888889985 88888886 556666555531 1 112333333444444578999
Q ss_pred EEccCCcc-----cHHH-HHHhhccCCEEEEEcCC
Q 021300 252 IDTVSAVH-----PLMP-LIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 252 ~d~~g~~~-----~~~~-~~~~l~~~G~~v~~G~~ 280 (314)
++++.-.. .... ....+.++..++++-..
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 99885221 0111 23457777777777553
No 188
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0065 Score=53.49 Aligned_cols=75 Identities=28% Similarity=0.355 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~ 247 (314)
.++.++||.|+ |.+|...++.+...|++|+++.+++++..+..+++ +.+. ..|-.+++.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999987 99999999999999999999998877655443333 3221 1344444433322 236
Q ss_pred ccEEEEccC
Q 021300 248 MDGIIDTVS 256 (314)
Q Consensus 248 ~d~v~d~~g 256 (314)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998876
No 189
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.01 Score=52.11 Aligned_cols=75 Identities=19% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE-E--ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~-~--v~~~~~~~~~~~-------~~~~ 248 (314)
++.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+.+ +... + .|..+++.+.+. .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 99999999999999999999999887665554443 3221 1 344555443322 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999873
No 190
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0094 Score=51.22 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----cEE-ecCCCHHHHHH----H---cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSF-LVSRDQDEMQA----A---MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----~~~-v~~~~~~~~~~----~---~~~~d 249 (314)
.+.+++|.|+ |.+|...++.+...|++|+++.+++++..++.+++.. ..+ .|-.+.+.+.. + .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999997 9999999999888899999999988777666665532 111 24444433322 2 23799
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998864
No 191
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.11 E-value=0.012 Score=52.02 Aligned_cols=100 Identities=15% Similarity=0.191 Sum_probs=64.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~ 247 (314)
.|.++||.|++ ++|.+.++.+...|++|+++.++.+ +.+++.+++|.... .|-.+++.+.++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999984 8999999999999999998877643 23344444554322 244454333222 247
Q ss_pred ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+|++++++|... ....++..|+.+|+++.+++..+
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~ 149 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS 149 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence 999999987321 01223455666799998876543
No 192
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.10 E-value=0.0023 Score=57.12 Aligned_cols=76 Identities=25% Similarity=0.267 Sum_probs=55.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
.+.+++|+|+|+.+.+++..+...|+ +++++.|+.++.++++++++... +......+.+......+|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999997 79899999998888888775321 111111122223335799999998754
No 193
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.09 E-value=0.003 Score=56.14 Aligned_cols=116 Identities=20% Similarity=0.221 Sum_probs=74.1
Q ss_pred hhhhHhcC--CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcE----EecCCCHHHHHHH
Q 021300 172 YSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA 244 (314)
Q Consensus 172 ~~~l~~~~--~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~----~v~~~~~~~~~~~ 244 (314)
+.+|.... ...+|++++|+|+|+.+.+++..++..|+ +++++.|+.++.+++++.++... .....+.+. .
T Consensus 112 ~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~---~ 188 (283)
T COG0169 112 LRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG---L 188 (283)
T ss_pred HHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc---c
Confidence 44555433 23568999999999999999999999996 89999999999999988887422 111111111 0
Q ss_pred cCCccEEEEccCCcccHH-----HHHHhhccCCEEEEEcCCCCCcccchhhhhc
Q 021300 245 MGTMDGIIDTVSAVHPLM-----PLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293 (314)
Q Consensus 245 ~~~~d~v~d~~g~~~~~~-----~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~ 293 (314)
. .+|+++++++...... .....+++.-.+.++=.. |...++.....
T Consensus 189 ~-~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~--P~~TplL~~A~ 239 (283)
T COG0169 189 E-EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYN--PLETPLLREAR 239 (283)
T ss_pred c-ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccC--CCCCHHHHHHH
Confidence 1 5999999986321110 014566666666666443 23445544443
No 194
>PRK06196 oxidoreductase; Provisional
Probab=97.09 E-value=0.012 Score=53.23 Aligned_cols=75 Identities=23% Similarity=0.295 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHH-------cCCccEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA-------MGTMDGII 252 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~-------~~~~d~v~ 252 (314)
.|.++||.|+ |++|..++..+...|++|+++.+++++.+++.+++. ... ..|-.+.+.+.++ .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4678999998 999999999988899999999999877666655443 221 1244454433322 24699999
Q ss_pred EccCC
Q 021300 253 DTVSA 257 (314)
Q Consensus 253 d~~g~ 257 (314)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99873
No 195
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0053 Score=53.07 Aligned_cols=75 Identities=21% Similarity=0.397 Sum_probs=57.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHc---CCccEEEEccCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVSA 257 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~---~~~d~v~d~~g~ 257 (314)
.+.+++|.|+ |.+|...++.+...|++|+++.++.++.+++.++.+...+ .|..+.+.+.+.. +++|++|++.|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5678999998 9999999999999999999999998877777666665433 3555554444332 468999999874
No 196
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.07 E-value=0.0074 Score=54.79 Aligned_cols=97 Identities=24% Similarity=0.228 Sum_probs=66.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHH---HHHcCCcEEe-cCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGADSFL-VSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~---~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d 253 (314)
.++++++||.+|+|. |..++.+++..+. .|+.++.+++..+.+ .++.|.+.+. ...+........+.||+|+.
T Consensus 77 ~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~ 155 (322)
T PRK13943 77 GLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFV 155 (322)
T ss_pred CCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEE
Confidence 368999999999974 9999999998763 688888888754333 2345654332 22221111111246999999
Q ss_pred ccCCcccHHHHHHhhccCCEEEEE
Q 021300 254 TVSAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
+.+.........+.|+++|+++..
T Consensus 156 ~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 156 TVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCchHHhHHHHHHhcCCCCEEEEE
Confidence 888665566788999999998774
No 197
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.07 E-value=0.0017 Score=62.21 Aligned_cols=78 Identities=22% Similarity=0.389 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD- 239 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~- 239 (314)
+.+++|+|+|+|+.|+.++..++..|.+|+++...+. +..+..+++|.+..++... .+
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 4688999999999999999999999999988876541 2334557788876554321 11
Q ss_pred HHHHHcCCccEEEEccCCcc
Q 021300 240 EMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 240 ~~~~~~~~~d~v~d~~g~~~ 259 (314)
.+......+|.||.++|...
T Consensus 219 ~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 219 SLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred CHHHHHhcCCEEEEEeCCCC
Confidence 22233357999999999653
No 198
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.05 E-value=0.014 Score=49.33 Aligned_cols=91 Identities=22% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.|.+++|+|.|.+|..+++.+...|++|+++++++++.+++.+.+++.. ++..+ .....+|+++-|.......
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----l~~~~~Dv~vp~A~~~~I~ 99 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPEE-----IYSVDADVFAPCALGGVIN 99 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----hccccCCEEEecccccccC
Confidence 46789999999999999999999999999999988888888877777643 33211 1122688888665433234
Q ss_pred HHHHHhhccCCEEEEEcCC
Q 021300 262 MPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~ 280 (314)
...++.|+ .+++.-|..
T Consensus 100 ~~~~~~l~--~~~v~~~AN 116 (200)
T cd01075 100 DDTIPQLK--AKAIAGAAN 116 (200)
T ss_pred HHHHHHcC--CCEEEECCc
Confidence 44445553 455544443
No 199
>PRK06484 short chain dehydrogenase; Validated
Probab=97.02 E-value=0.013 Score=56.95 Aligned_cols=76 Identities=22% Similarity=0.382 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~ 250 (314)
..|.++||.|+ +++|.+.++.+...|++|+++.++.++..++.++++.+. ..|-.+++.+.++ .+.+|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35788999987 999999999999999999999999888878877776532 2344555433322 246999
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 200
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.02 E-value=0.0064 Score=53.92 Aligned_cols=103 Identities=20% Similarity=0.116 Sum_probs=68.6
Q ss_pred hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cEEecCCCHHHHHHHcCCccE
Q 021300 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~~v~~~~~~~~~~~~~~~d~ 250 (314)
++........+.+++|+|+|++|.+++..+...|++++++.++.++.+++.+++.. ...+. .+. .....+|+
T Consensus 107 ~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~Di 181 (270)
T TIGR00507 107 DLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDL 181 (270)
T ss_pred HHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccE
Confidence 34432323567899999999999999998888899999999998887777776542 12211 111 12246999
Q ss_pred EEEccCCcc--cH---HHHHHhhccCCEEEEEcCCC
Q 021300 251 IIDTVSAVH--PL---MPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 251 v~d~~g~~~--~~---~~~~~~l~~~G~~v~~G~~~ 281 (314)
+|++++... .. ......++++..++++...+
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999997531 01 11245577788888885543
No 201
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.01 E-value=0.0029 Score=51.89 Aligned_cols=97 Identities=23% Similarity=0.290 Sum_probs=66.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-------------------C-CHHHHH
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-------------------R-DQDEMQ 242 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-------------------~-~~~~~~ 242 (314)
+.-+++|+|+|.+|..|+.+++.+|+++++.+..+++.+++ +..++..+... . ....+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34778999999999999999999999999999998877655 55665444331 0 012333
Q ss_pred HHcCCccEEEEcc---CC---cccHHHHHHhhccCCEEEEEcCC
Q 021300 243 AAMGTMDGIIDTV---SA---VHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 243 ~~~~~~d~v~d~~---g~---~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+....+|+++-+. +. .-.....++.|+++..++++..-
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D 141 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD 141 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence 3344689988643 11 12357788999999999999764
No 202
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.01 E-value=0.0066 Score=58.54 Aligned_cols=73 Identities=18% Similarity=0.210 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
+.+|++++|+|.|..|++++++++..|++|++.+..+.+... ++++|+..+...+.++. ...+|+|+.+.|.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~~~~----l~~~D~VV~SpGi~ 81 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDAVQQ----IADYALVVTSPGFR 81 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcchHhH----hhcCCEEEECCCCC
Confidence 567899999999999999999999999999998877665544 45678754322222222 24589999999865
No 203
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.00 E-value=0.011 Score=51.08 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--CcE---EecCCCHHHHHHH-------cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADS---FLVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~~---~v~~~~~~~~~~~-------~~~~d 249 (314)
.+.++||.|+ |.+|...++.+...|++|+++.+++++..++.+.+. .+. ..|-.+++.+..+ .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999998 999999999998899999999999877666655443 211 1234444433322 23689
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999874
No 204
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.00 E-value=0.019 Score=49.94 Aligned_cols=75 Identities=21% Similarity=0.313 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++++++.+++++.+++.+++ +.. ...|-.+++.+.++ .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999998889999999999987765554443 322 12244454433322 2469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998873
No 205
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.99 E-value=0.021 Score=49.63 Aligned_cols=72 Identities=19% Similarity=0.308 Sum_probs=52.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH----H---cCCccEEEEc
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA----A---MGTMDGIIDT 254 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~----~---~~~~d~v~d~ 254 (314)
+++|.|+ |.+|...+..+...|++|+++++++++..++.+.++.+.. .|-.+.+.+.+ + .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6889987 9999999999999999999999998877666655554322 23344433322 1 2479999998
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 206
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.99 E-value=0.0071 Score=56.48 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=62.8
Q ss_pred EEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-C--C-cEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 187 VGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-G--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 187 vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-g--a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
|+|+|+|.+|..+++.+....- ++++.+++.++.+++.+++ + . ...+|-.+.+.+.++..+.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6889999999999999997764 8999999999887887652 2 2 2345667777788888899999999987644
Q ss_pred HHHHHHhhccCCEEEE
Q 021300 261 LMPLIGLLKSQGKLVL 276 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~ 276 (314)
..-+-.+++.+-.+++
T Consensus 81 ~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 81 EPVARACIEAGVHYVD 96 (386)
T ss_dssp HHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHhCCCeec
Confidence 4445555566666776
No 207
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.02 Score=50.57 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=50.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE----EecCCCHHHHHHH-------cCCccE
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~----~v~~~~~~~~~~~-------~~~~d~ 250 (314)
+++|.|+ |++|..+++.+...|++|+++.++++..+++.++ .+... ..|-.+++.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6889987 9999999999998999999998887765555433 23321 2355555433222 246899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
+|.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999974
No 208
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.009 Score=51.78 Aligned_cols=98 Identities=19% Similarity=0.299 Sum_probs=62.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~ 247 (314)
++.++||.|+ |.+|...+..+...|++|+++.++.. +.+.+.++ .+.+. ..|-.+++.+... .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999998889999998888653 33333222 23321 1244555433322 136
Q ss_pred ccEEEEccCCc-------------------ccHHHHHHhhccCCEEEEEcCC
Q 021300 248 MDGIIDTVSAV-------------------HPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 248 ~d~v~d~~g~~-------------------~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+|+++.+.|.. ..+..+.+.+..+|+++.+++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999888642 1234455555567899988763
No 209
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.98 E-value=0.017 Score=51.21 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=66.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcEE--ecCCCHHHHHH----H---cCC
Q 021300 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADSF--LVSRDQDEMQA----A---MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~~~--v~~~~~~~~~~----~---~~~ 247 (314)
.|.++||.|+ +++|.++++.+...|++|+++.++. ++.+++.++++.... .|-.+++.+.+ + .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999986 4899999999988999999888874 234445455554322 34455433222 2 247
Q ss_pred ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+|++++++|... ....+++.|+++|+++.+++..+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 999999988410 12345566777899999876543
No 210
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.96 E-value=0.0094 Score=56.06 Aligned_cols=96 Identities=14% Similarity=0.225 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-.+.+++|+|+|.+|.+++..+...|+ +++++.|+.++.+.+.++++...++. .+...+....+|+||.|++.++.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---LSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCCCCe
Confidence 567899999999999999999999996 78888899888888888886222222 23334555679999999997653
Q ss_pred HHHHHHhhccC-CEEEEEcCCC
Q 021300 261 LMPLIGLLKSQ-GKLVLVGAPE 281 (314)
Q Consensus 261 ~~~~~~~l~~~-G~~v~~G~~~ 281 (314)
+-. .+.++.. =.+++++.|.
T Consensus 256 vi~-~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCCC
Confidence 211 1112211 1367787763
No 211
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.018 Score=50.57 Aligned_cols=75 Identities=20% Similarity=0.283 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CC-cE---EecCCCHHHHHH----H---cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA-DS---FLVSRDQDEMQA----A---MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga-~~---~v~~~~~~~~~~----~---~~ 246 (314)
.|.++||.|+ +++|...++.+...|++|+++.+++++.+++.+++ +. +. ..|-.+++.+.+ + .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4678999987 99999999999999999999999887655544332 21 21 124455443322 2 24
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
.+|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 212
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.012 Score=51.44 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~~~-------~~ 246 (314)
.+.++||.|+ |++|...++.+...|++|+++.+++++.+++.+++ +.+. ..|-.+++.+... .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999987 99999999999999999999999887766665543 2221 1244444333222 24
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
.+|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999883
No 213
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.96 E-value=0.00022 Score=55.41 Aligned_cols=50 Identities=40% Similarity=0.502 Sum_probs=36.4
Q ss_pred cCCcEEecCCCHHHHHHHcCCccEEEEccC--CcccHHHHHHhhccCCEEEEEcC
Q 021300 227 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 227 ~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
|||+.++|+++.++ ...+++|+|||++| ....+..++++| ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999997776 33468999999999 554446667777 9999999984
No 214
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.96 E-value=0.0091 Score=53.28 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC----CcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g----a~~~v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
..+.+++|+|+|+.+.+++..+...|+ +++++.|+.++.+++++++. ...+. ..+..........+|+|++++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 457899999999999999998888897 78889999888888877653 21121 1121112223346999999985
No 215
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.02 Score=50.58 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=52.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEEE
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGII 252 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v~ 252 (314)
+.++||.|+ |.+|...++.+...|++|+++.+++++..++.+.++.... .|-.+++.+... .+.+|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 457899987 9999999998888899999999998877666655543221 233444332221 24789999
Q ss_pred EccCC
Q 021300 253 DTVSA 257 (314)
Q Consensus 253 d~~g~ 257 (314)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99884
No 216
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.019 Score=50.19 Aligned_cols=73 Identities=18% Similarity=0.261 Sum_probs=53.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc---EEecCCCHHHHHH----H----cCCccEE
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---SFLVSRDQDEMQA----A----MGTMDGI 251 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~---~~v~~~~~~~~~~----~----~~~~d~v 251 (314)
.++||.|+ |.+|...++.+...|++|+++.++.+..+++.+.++ .. ...|-.+.+.+.+ . .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 46899987 999999999888899999999999887777766554 21 1234455443332 2 3468999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999884
No 217
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0083 Score=52.36 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
.|.++||.|+ |.+|...++.+...|+++++++++..+.+.+.++++...+ .|-.+++.+.+. .+.+|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999998 9999999999999999999999988776666666654322 355555433322 246899999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 218
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.94 E-value=0.016 Score=50.60 Aligned_cols=75 Identities=25% Similarity=0.394 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++|+++.+++++.+++.+++ |.... .|-.+++.+.++ .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999997 99999999999889999999999877665554443 32211 244444433332 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 219
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.012 Score=50.33 Aligned_cols=75 Identities=21% Similarity=0.381 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE-ecCCCHHHHHH-------HcCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF-LVSRDQDEMQA-------AMGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~-v~~~~~~~~~~-------~~~~~d~ 250 (314)
++.++||.|+ |.+|..+++.+...|++|+++++++++..+..+++ +...+ .|-.+.+.+.+ ..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4689999998 99999999999888999999999776544433332 33221 23344332222 2247999
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 220
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.014 Score=50.75 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=52.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHHc-CCccEEEEcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAM-GTMDGIIDTV 255 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~~~~~~~~-~~~d~v~d~~ 255 (314)
+.++||.|+ |.+|..+++.+...|++++++++++++..++.+ ..+.+ ...|-.+++.+.... .++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 357999997 999999999999999999999998765544432 22322 123555555555443 4899999998
Q ss_pred C
Q 021300 256 S 256 (314)
Q Consensus 256 g 256 (314)
|
T Consensus 82 g 82 (257)
T PRK09291 82 G 82 (257)
T ss_pred C
Confidence 7
No 221
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.92 E-value=0.0086 Score=51.08 Aligned_cols=97 Identities=30% Similarity=0.306 Sum_probs=64.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCCcE-EecCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADS-FLVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~---~~ga~~-~v~~~~~~~~~~~~~~~d~v~d 253 (314)
.+++|++||-+|+|. |..+..+++..+ .+++.++.+++..+.+.+ +.|.+. -+...+........+.||.|+-
T Consensus 73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~fD~I~~ 151 (212)
T PRK13942 73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDRIYV 151 (212)
T ss_pred CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCCcCEEEE
Confidence 478999999999865 777778887765 589999998876544433 334321 1111221110011246999887
Q ss_pred ccCCcccHHHHHHhhccCCEEEEE
Q 021300 254 TVSAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
............+.|+++|+++..
T Consensus 152 ~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 152 TAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCCcccchHHHHHhhCCCcEEEEE
Confidence 655555678899999999998875
No 222
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.90 E-value=0.0048 Score=55.14 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC----cEEecCCCHHHHHHHcCCccEEEEccC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga----~~~v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
..+.+++|+|+|++|.+++..+...|+ +++++.++.++.+.+++.++. ..+.... .+.+....+|+||+|+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 456889999999999999999999998 788999998888888776642 1222211 12223356999999964
Q ss_pred Cc--c--cHHHHHHhhccCCEEEEEcCC
Q 021300 257 AV--H--PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 257 ~~--~--~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.. . ........+++...++++-..
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~ 229 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIVYF 229 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence 21 0 011123456777667666543
No 223
>PRK09242 tropinone reductase; Provisional
Probab=96.88 E-value=0.027 Score=49.14 Aligned_cols=75 Identities=12% Similarity=0.246 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcEE---ecCCCHHHHH-------HHcC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADSF---LVSRDQDEMQ-------AAMG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~~---v~~~~~~~~~-------~~~~ 246 (314)
.|.++||.|+ |.+|...++.+...|++++++.++.++.+++.+++ +.+.. .|-.+++.+. +..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4788999997 99999999999999999999999887766665443 22221 2444443322 2234
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 224
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.88 E-value=0.026 Score=49.21 Aligned_cols=75 Identities=16% Similarity=0.308 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++|+++.+++++..++.++ .+.+.. .|-.+.+.+.+. .+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999999999988665555443 343322 233444433222 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999874
No 225
>PRK09186 flagellin modification protein A; Provisional
Probab=96.88 E-value=0.015 Score=50.68 Aligned_cols=74 Identities=23% Similarity=0.310 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCc---E-EecCCCHHHHHHHc-------C
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---S-FLVSRDQDEMQAAM-------G 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~---~-~v~~~~~~~~~~~~-------~ 246 (314)
.+.++||.|+ |.+|...+..+...|++++++.+++++.+++.+++ +.. . ..|-.+++.+.++. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4688999997 99999999999999999999998887766655444 222 1 22545554433322 3
Q ss_pred CccEEEEccC
Q 021300 247 TMDGIIDTVS 256 (314)
Q Consensus 247 ~~d~v~d~~g 256 (314)
.+|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999985
No 226
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0081 Score=52.50 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=55.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc----EEecCCCHHHHHHH-------cCCcc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~----~~v~~~~~~~~~~~-------~~~~d 249 (314)
.++.++||.|+ |.+|...++.+...|++|+++.++++..+++.+.+... ...|-.+++.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57789999998 99999999999999999999999877766665544322 22344555433322 24799
Q ss_pred EEEEccCCc
Q 021300 250 GIIDTVSAV 258 (314)
Q Consensus 250 ~v~d~~g~~ 258 (314)
+||.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999998754
No 227
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.87 E-value=0.0086 Score=52.53 Aligned_cols=75 Identities=23% Similarity=0.300 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQA-------AMGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~-------~~~~~d~v 251 (314)
++.++||.|+ +++|...++.+...|++|+++.+++++.+++.++++.... .|-.+++.+.. ..+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999987 9999999999999999999999998887777666653211 23344432222 12469999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|+++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999873
No 228
>PLN00203 glutamyl-tRNA reductase
Probab=96.87 E-value=0.011 Score=57.20 Aligned_cols=98 Identities=24% Similarity=0.354 Sum_probs=68.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~- 260 (314)
.+.+|+|+|+|.+|.++++.+...|+ +++++.++.++.+.+.++++...+ .....+...+....+|+||.+++....
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 37899999999999999999999997 799999999988888887752211 112223334455689999999876532
Q ss_pred -HHHHHHhhcc----CC---EEEEEcCCC
Q 021300 261 -LMPLIGLLKS----QG---KLVLVGAPE 281 (314)
Q Consensus 261 -~~~~~~~l~~----~G---~~v~~G~~~ 281 (314)
....++.+.+ .| .+++++.|.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 3334444322 12 488888874
No 229
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.86 E-value=0.012 Score=52.55 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---hhHHHHHHHcCCc-----EEecCCCHHHHHHHcCCccEEE
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAIERLGAD-----SFLVSRDQDEMQAAMGTMDGII 252 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---~~~~~~~~~~ga~-----~~v~~~~~~~~~~~~~~~d~v~ 252 (314)
..+.+++|+|+|+.+.+++..+...|+ +++++.|++ ++.+.++++++.. .+....+.+.+......+|+|+
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 466799999999999887777777887 788888884 4667777766531 1212111112223345799999
Q ss_pred EccCCcc------cHHHHHHhhccCCEEEEEcC
Q 021300 253 DTVSAVH------PLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 253 d~~g~~~------~~~~~~~~l~~~G~~v~~G~ 279 (314)
+++.... ........++++..+.++-.
T Consensus 202 NaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY 234 (288)
T PRK12749 202 NGTKVGMKPLENESLVNDISLLHPGLLVTECVY 234 (288)
T ss_pred ECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecC
Confidence 9885321 01112344566666666644
No 230
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.86 E-value=0.013 Score=52.15 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=65.4
Q ss_pred chhhhhhhhhhHhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHH
Q 021300 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243 (314)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~ 243 (314)
+++-......++....--.|.+++|+|+|. +|...+.++...|++|++.-+... .+. +
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~------------------~ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLP------------------E 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHH------------------H
Confidence 444333344455555457899999999976 999999999999998777665321 221 2
Q ss_pred HcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 244 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
....+|+++.++|.+..+ -.+.++++-.++.+|..+
T Consensus 199 ~~~~aDIvI~AtG~~~~v--~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 LVKQADIIVGAVGKPELI--KKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred HhccCCEEEEccCCCCcC--CHHHcCCCCEEEEEEEee
Confidence 225689999999876532 245689999999998754
No 231
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.85 E-value=0.022 Score=43.53 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHH---HHcCCc--EEecCCCHHHHHHHcCCccEEEEc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~---~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
+.++++++-+|+|. |..+..+++..+ .+++.++.++...+.+. +.++.. .++..+..+......+.+|+|+-.
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 56788888899876 888888998764 68999998877654442 334432 222221111122234579999975
Q ss_pred cCCc---ccHHHHHHhhccCCEEEEEc
Q 021300 255 VSAV---HPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 255 ~g~~---~~~~~~~~~l~~~G~~v~~G 278 (314)
.+.. ..+..+.+.|+++|+++...
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 4332 24778999999999998764
No 232
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.85 E-value=0.017 Score=49.73 Aligned_cols=106 Identities=13% Similarity=0.206 Sum_probs=68.2
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe---EEEEeCC----hhhH-------HHHHHHcCCcEEec
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAIERLGADSFLV 234 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~---vi~v~~~----~~~~-------~~~~~~~ga~~~v~ 234 (314)
.....+++..+.--.+.+++|+|+|..|..++..+...|++ ++++.+. .++. .++.+.++... ..
T Consensus 10 AG~~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~ 88 (226)
T cd05311 10 AGLLNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG 88 (226)
T ss_pred HHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc
Confidence 33444565554335678999999999999999999888975 7788877 3332 34455544221 11
Q ss_pred CCCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300 235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 235 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
.+ +.+...++|++|.+++........++.|.++..++.+..
T Consensus 89 ---~~-l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsn 129 (226)
T cd05311 89 ---GT-LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALAN 129 (226)
T ss_pred ---CC-HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCC
Confidence 11 222334599999999733323567788888777776653
No 233
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.85 E-value=0.018 Score=52.26 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=66.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe-cCCCHHHHHHHcCCccEEEEccCCcc----
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH---- 259 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v-~~~~~~~~~~~~~~~d~v~d~~g~~~---- 259 (314)
+|+|.|+ |.+|...++.+...|.+|++++|+.++...+ +..+.+.+. |-.+++.+.+...++|+||.+++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899998 9999999999988999999999987654333 334554332 45667777777778999999875321
Q ss_pred --------cHHHHHHhhccCC--EEEEEcCC
Q 021300 260 --------PLMPLIGLLKSQG--KLVLVGAP 280 (314)
Q Consensus 260 --------~~~~~~~~l~~~G--~~v~~G~~ 280 (314)
....+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1234555555544 78888764
No 234
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.025 Score=50.14 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.|.++||.|+ |++|...+..+...|++|+++.++.++.+++.+++ +.+. ..|-.+++.+.++ .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999999999999998877666555443 3322 1244444433322 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999873
No 235
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.033 Score=48.85 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=64.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHcC-CcE---EecCCCHHHHH----HH---c
Q 021300 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLG-ADS---FLVSRDQDEMQ----AA---M 245 (314)
Q Consensus 183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~---~~~~~~~~~~~g-a~~---~v~~~~~~~~~----~~---~ 245 (314)
.|.+++|.|+ +++|.++++.+...|++|+++.+. .++.+++.+++. ... ..|-.+++.+. ++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 4678999986 599999999988899999888654 234555555552 221 12444443322 22 2
Q ss_pred CCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 246 ~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+.+|++++++|... ....+++.|+++|+++.+++..+
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 46999999886310 01234555667899999987543
No 236
>PRK06128 oxidoreductase; Provisional
Probab=96.79 E-value=0.032 Score=50.07 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=63.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh--h---HHHHHHHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--K---KSEAIERLGADSF---LVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~--~---~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~ 246 (314)
.|.++||.|+ |++|...+..+...|++|+++.+..+ + ..+..++.+.+.. .|-.+++.+.++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4678999987 99999999999989999987765432 1 2222334454322 244444333222 24
Q ss_pred CccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 247 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
++|++|.++|... .++.+++.|+++|+++.+++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 7999999987320 1233445556788999987753
No 237
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.78 E-value=0.002 Score=57.16 Aligned_cols=97 Identities=31% Similarity=0.295 Sum_probs=57.2
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-c-EEecCCCHHHHHHHcCCccEE
Q 021300 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-D-SFLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 177 ~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~-~~v~~~~~~~~~~~~~~~d~v 251 (314)
...++++|++||-+|+| -|..+..+++..|++|+.++.++++.+.+.+ +.|. + .-+...+. ..+...||.|
T Consensus 56 ~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~fD~I 131 (273)
T PF02353_consen 56 EKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKFDRI 131 (273)
T ss_dssp TTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-SEE
T ss_pred HHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCCCEE
Confidence 34458999999999987 4667788888889999999999887765533 3342 1 11222221 2334488886
Q ss_pred EE-----ccCCc---ccHHHHHHhhccCCEEEEE
Q 021300 252 ID-----TVSAV---HPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 252 ~d-----~~g~~---~~~~~~~~~l~~~G~~v~~ 277 (314)
+- .+|.. ..+..+.+.|+|+|++++-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 54 44432 2378888999999998754
No 238
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.041 Score=48.20 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=64.1
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChhh---HHHHHHHcCCcEE--ecCCCHHHHHH-------HcCC
Q 021300 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQA-------AMGT 247 (314)
Q Consensus 183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~~---~~~~~~~~ga~~~--v~~~~~~~~~~-------~~~~ 247 (314)
.|.++||.|++ ++|.+.++.+...|++|+++.++.+. .+++.++++.... .|-.+++.+.+ ..+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57889999863 89999999998899999988887532 3444445443222 23344432222 2246
Q ss_pred ccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 248 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+|+++.++|... ..+.++..|+.+|+++.+++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 899999987321 1233556667779998887654
No 239
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.029 Score=49.24 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCChh---hHHHHHHHcCCcEE--ecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g--~vG~~a~~~a~~~g~~vi~v~~~~~---~~~~~~~~~ga~~~--v~~~~~~~~~~~-------~~~ 247 (314)
.|.++||.|+ + ++|.+.++.+...|++|++..+++. ..+++.++.|.... .|-.+++.+.++ .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678899987 4 7999998888888999988877632 23344444453322 355555433322 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998873
No 240
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.78 E-value=0.026 Score=52.62 Aligned_cols=96 Identities=27% Similarity=0.403 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-.+.++||+|+|-+|..++..+...|. ++++.-|..++..++++++|+..+- .+.+......+|+||-+++.+..
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~----l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA----LEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec----HHHHHHhhhhCCEEEEecCCCcc
Confidence 477899999999999999999999995 8888899999999999999965431 23334445679999999987642
Q ss_pred ---HHHHHHhhcc-CC-EEEEEcCCC
Q 021300 261 ---LMPLIGLLKS-QG-KLVLVGAPE 281 (314)
Q Consensus 261 ---~~~~~~~l~~-~G-~~v~~G~~~ 281 (314)
-....+.++. .. -+++++.|.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 2334445543 23 577888874
No 241
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.76 E-value=0.014 Score=49.49 Aligned_cols=113 Identities=15% Similarity=0.043 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-.|.+|||+|+|.+|...++.+...|++++++.+... ...++.+. +. ....... .......++|+||-++++..
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~--~~~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GK-IRWKQKE--FEPSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CC-EEEEecC--CChhhcCCceEEEEcCCCHH-
Confidence 3568999999999999999888889999988876532 22333322 21 1111111 11122357999999999886
Q ss_pred HHHHHHhhccCCEEEEEcCCCCCcccchhhhhc-CceeEe
Q 021300 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GEEEDS 299 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~ 299 (314)
.+..+...+..+.++.+...+...+|-...+.. ..++|.
T Consensus 83 lN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~ia 122 (202)
T PRK06718 83 VNEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTIS 122 (202)
T ss_pred HHHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEE
Confidence 555555554556666665544444555444443 334443
No 242
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.76 E-value=0.012 Score=53.55 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a-~~~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
+...+++|+|+|..|...+..+ ...+. ++.++.+++++.+++.+++ +.+.. ...+ ..+.....|+|+.++
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC---HHHHHhcCCEEEEcc
Confidence 5567899999999998777554 34566 7778888888887777654 43322 2233 233446799999999
Q ss_pred CCcccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300 256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA 288 (314)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~ 288 (314)
++.+.+ .. ..+++|-.++.+|... +..++|.
T Consensus 201 ~s~~p~-i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 201 NAKTPV-FS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCCCcc-hH-HhcCCCcEEEecCCCCcccccCCH
Confidence 877533 34 8889988999999864 3456665
No 243
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.73 E-value=0.02 Score=48.50 Aligned_cols=96 Identities=28% Similarity=0.294 Sum_probs=64.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHH---HcCCc---EEecCCCHHHHHHHcCCccEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~---~~ga~---~~v~~~~~~~~~~~~~~~d~v 251 (314)
.++++++||=+|+|. |..++.+++..+ .+++.++.+++..+.+.+ +.+.. .++..+..+.. ...+.||.|
T Consensus 69 ~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I 146 (205)
T PRK13944 69 EPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGL-EKHAPFDAI 146 (205)
T ss_pred CCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCC-ccCCCccEE
Confidence 368999999999865 777777777663 589999999876544433 33432 22222211111 113479999
Q ss_pred EEccCCcccHHHHHHhhccCCEEEEE
Q 021300 252 IDTVSAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 252 ~d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
+-+.........+.+.|++||+++..
T Consensus 147 i~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 147 IVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EEccCcchhhHHHHHhcCcCcEEEEE
Confidence 87766555567888999999999774
No 244
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.72 E-value=0.039 Score=48.13 Aligned_cols=99 Identities=14% Similarity=0.220 Sum_probs=62.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c--E-EecCCCHHHHH----HH---cCCc
Q 021300 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D--S-FLVSRDQDEMQ----AA---MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~--~-~v~~~~~~~~~----~~---~~~~ 248 (314)
.|.+++|.|++ ++|.+.++.+...|++|+++.++. +..+..+++.. . . -.|-.+++.+. ++ .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46889999874 899999999999999999888774 33333344321 1 1 12334443222 22 2469
Q ss_pred cEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 249 DGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 249 d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
|++++++|... ..+.+++.|+.+|+++.+++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 99999987320 12234556667799988876543
No 245
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.72 E-value=0.03 Score=48.83 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~ 250 (314)
.|.++||.|+ +++|.+.++.+...|++|+++.+... +..+..++.+.+. ..|-.+++.+.++ .+.+|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5788999987 99999999999999999988877543 2223334455432 2344454433322 246999
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++++.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999873
No 246
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.71 E-value=0.016 Score=51.73 Aligned_cols=131 Identities=24% Similarity=0.288 Sum_probs=77.5
Q ss_pred CCceEECCCCCCcccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHH
Q 021300 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (314)
Q Consensus 146 ~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~ 224 (314)
....+++..++.|... ....|++..-..-..+++|.++|=+|+|+ |.+++..+|. |+ +++.++.++-..+...
T Consensus 129 ~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 129 DELNIELDPGLAFGTG----THPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred CceEEEEccccccCCC----CChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHHHH
Confidence 3667778877766433 34444443222222357999999899865 7777777765 66 6888888775543332
Q ss_pred H---HcCCcEEecCCCHHHHHHHc-CCccEEEEccCCc---ccHHHHHHhhccCCEEEEEcCCCC
Q 021300 225 E---RLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 225 ~---~~ga~~~v~~~~~~~~~~~~-~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
+ .-+.+..+.....+...... +.||+|+-++=.. ...+...+.++++|++++.|-...
T Consensus 203 eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 203 ENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 2 12222100001111112223 4799999877321 235667788999999999998653
No 247
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.71 E-value=0.0024 Score=47.86 Aligned_cols=93 Identities=23% Similarity=0.215 Sum_probs=62.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 262 (314)
.|.+|||+|+|.+|..-++.+...|++++++....+ .. + +--.... +. . .....++++|+-++++...-.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~---~~-~--~~i~~~~-~~--~-~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIE---FS-E--GLIQLIR-RE--F-EEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEH---HH-H--TSCEEEE-SS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh---hh-h--hHHHHHh-hh--H-HHHHhhheEEEecCCCHHHHH
Confidence 578899999999999999999999999999998861 11 1 2211211 11 1 233567999999999987555
Q ss_pred HHHHhhccCCEEEEEcCCCCCcc
Q 021300 263 PLIGLLKSQGKLVLVGAPEKPLE 285 (314)
Q Consensus 263 ~~~~~l~~~G~~v~~G~~~~~~~ 285 (314)
......+..|.++.+...+...+
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~~~d 98 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPELCD 98 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CCCCS
T ss_pred HHHHHHhhCCEEEEECCCcCCCe
Confidence 56666677899888877655433
No 248
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.03 Score=50.34 Aligned_cols=75 Identities=25% Similarity=0.258 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C-CcE---EecCCCHHHHHHH-------c
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------M 245 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g-a~~---~v~~~~~~~~~~~-------~ 245 (314)
..|.++||.|+ |++|..+++.+...|++++++.++.++.+++.+++ + .+. ..|-.+.+.+.++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 35688999987 99999999988888999999999877654443332 1 221 1244444333322 2
Q ss_pred CCccEEEEccC
Q 021300 246 GTMDGIIDTVS 256 (314)
Q Consensus 246 ~~~d~v~d~~g 256 (314)
+++|++|.++|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 36999999987
No 249
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.70 E-value=0.041 Score=47.91 Aligned_cols=75 Identities=19% Similarity=0.396 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |++|...++.+...|++++++.+++++..++.+++ +.... .|-.+++.+.+. .+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999987 99999999999999999999999877665554443 32221 244444433322 2469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999974
No 250
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.035 Score=48.62 Aligned_cols=75 Identities=19% Similarity=0.320 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCc-EE--ecCCCHHHHHHH------cCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-SF--LVSRDQDEMQAA------MGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga~-~~--v~~~~~~~~~~~------~~~~d~ 250 (314)
++.++||.|+ |.+|...++.+...|++|+++++++++..++.+++ +.. .. .|-.+++.+..+ .+.+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 99999999999889999999999987776665543 211 11 234444332222 246899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
No 251
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.65 E-value=0.047 Score=46.98 Aligned_cols=75 Identities=24% Similarity=0.329 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v 251 (314)
++.++||.|+ |.+|...++.+...|+.|++..++.++.+++.+.++.... .|-.+.+.+.++ .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 9999999999988999888888887777666655553221 233444333322 2469999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 252
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.64 E-value=0.0056 Score=54.06 Aligned_cols=109 Identities=21% Similarity=0.223 Sum_probs=73.2
Q ss_pred hhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCc-EE-ecCCCHHHHHH
Q 021300 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD-SF-LVSRDQDEMQA 243 (314)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~-~~-v~~~~~~~~~~ 243 (314)
..++..+....+++||++||=+|+|- |.+++..|+..|++|+.++-++++...+.+ +.|.. .+ +.. ...+.
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l---~d~rd 133 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL---QDYRD 133 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe---ccccc
Confidence 33444454556699999999999865 667889999999999999999987655544 34533 11 101 11122
Q ss_pred HcCCccEEE-----EccCCc---ccHHHHHHhhccCCEEEEEcCCC
Q 021300 244 AMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 244 ~~~~~d~v~-----d~~g~~---~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
..+.||-|+ +.+|.. .-+..+.+.|+++|++.+...+.
T Consensus 134 ~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 134 FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 334477754 455542 24778899999999988876543
No 253
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.012 Score=52.79 Aligned_cols=75 Identities=21% Similarity=0.371 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |++|...++.+...|++|++++++.++.+++.+++ +.+.. .|-.+++.+.+. .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999987 99999999999889999999999987766654443 32221 244444433322 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
No 254
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.038 Score=48.92 Aligned_cols=100 Identities=14% Similarity=0.170 Sum_probs=64.1
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCcE--EecCCCHHHHHH----H---cC
Q 021300 182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQA----A---MG 246 (314)
Q Consensus 182 ~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~~--~v~~~~~~~~~~----~---~~ 246 (314)
-.|.++||.|+ +++|.+.++.+...|++|+++.+++ ++.+++.++++... -.|-.+++.+.+ + .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 45678999986 5899999999999999998877653 33445555556322 224444433222 2 24
Q ss_pred CccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 247 ~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+|++++++|... ..+.+++.++.+|+++.+++..
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 6899999987320 1222345566679998887654
No 255
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.014 Score=50.86 Aligned_cols=74 Identities=22% Similarity=0.337 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
.|.+++|.|+ |++|...++.+...|++|+++.++.....+... .+.. ...|-.+.+.+.+..+.+|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 3678999987 999999999998999999998887632222111 1111 223555566666666789999999974
No 256
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.61 E-value=0.018 Score=50.50 Aligned_cols=74 Identities=27% Similarity=0.289 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHH----HH---cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQ----AA---MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~----~~---~~~~d~v 251 (314)
++.+++|.|+ |++|...++.+...|++|+++.++.++.+++.+..+.+. ..|-.+.+.+. +. .+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999987 999999999999999999999998877766655444321 12444433222 22 2468999
Q ss_pred EEccC
Q 021300 252 IDTVS 256 (314)
Q Consensus 252 ~d~~g 256 (314)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99987
No 257
>PRK07574 formate dehydrogenase; Provisional
Probab=96.60 E-value=0.019 Score=53.46 Aligned_cols=90 Identities=20% Similarity=0.260 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH-
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~- 261 (314)
.|.+|.|+|.|.+|...++.++.+|.+|+++.+..... +..+.++.... . .+.++....|+|+-+.......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 57889999999999999999999999999998775322 22234454321 1 2345556789988887633212
Q ss_pred ----HHHHHhhccCCEEEEEcC
Q 021300 262 ----MPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 262 ----~~~~~~l~~~G~~v~~G~ 279 (314)
...+..|+++..+|.++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 346778888888888876
No 258
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.60 E-value=0.02 Score=48.91 Aligned_cols=97 Identities=30% Similarity=0.351 Sum_probs=63.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHH---HHcCCcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~---~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d 253 (314)
.+++|++||-+|+|. |..++.+++..+. +|+.++.+++....+. +++|.+.+ +...+..........||+|+-
T Consensus 74 ~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Ii~ 152 (215)
T TIGR00080 74 ELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIYV 152 (215)
T ss_pred CCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEEEE
Confidence 378999999999865 7777788887653 6889998877654443 33443321 112221111111247999886
Q ss_pred ccCCcccHHHHHHhhccCCEEEEE
Q 021300 254 TVSAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
............+.|+++|+++..
T Consensus 153 ~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 153 TAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cCCcccccHHHHHhcCcCcEEEEE
Confidence 655555577888999999998875
No 259
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.59 E-value=0.0076 Score=46.93 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=55.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHH
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~ 263 (314)
-+|-|+|+|.+|......++..|..+..+. ++.+..+++.+.++...+.+. .+....+|++|-++.+.. +..
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda-I~~ 83 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA-IAE 83 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-HHH
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-HHH
Confidence 568899999999999999999999888765 444456666656665544332 234567999999999885 888
Q ss_pred HHHhhccC-----CEEEEE
Q 021300 264 LIGLLKSQ-----GKLVLV 277 (314)
Q Consensus 264 ~~~~l~~~-----G~~v~~ 277 (314)
+...|... |+++.-
T Consensus 84 va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 84 VAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHhccCCCCcEEEE
Confidence 88887654 655443
No 260
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.019 Score=51.27 Aligned_cols=95 Identities=19% Similarity=0.148 Sum_probs=72.1
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++..+.--.|.+|.|+|. +.+|.-.+.++...|++|++..+.... .
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 467777777777777664468999999998 699999999999999999888655432 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.+.....|+|+-++|....+...+ +++|..++.+|..
T Consensus 197 ~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 234455888999998876555444 8889999999854
No 261
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.58 E-value=0.013 Score=47.45 Aligned_cols=111 Identities=14% Similarity=0.030 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.|.+|+|+|+|.+|..-++.+...|++|+++. ++..+++. +++.-. ...+.. ...-..++|+|+-++++.. .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~~~--~~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQKTF--SNDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEeccc--ChhcCCCceEEEECCCCHH-H
Confidence 467899999999999998888888999998884 33334443 344211 111111 1112357999999999886 5
Q ss_pred HHHHHhhccCCEEEEEcCCCCCcccchhhhhc-CceeEe
Q 021300 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GEEEDS 299 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~ 299 (314)
+..+...++.+.++.....+...+|-...... .+..+.
T Consensus 84 N~~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~l~ia 122 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDEYVVT 122 (157)
T ss_pred HHHHHHHHHHCCcEEECCCCCcCcEEeeeEEEECCeEEE
Confidence 56555554433344443333334444434333 334443
No 262
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.57 E-value=0.027 Score=49.95 Aligned_cols=95 Identities=20% Similarity=0.197 Sum_probs=72.1
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
..||+..+.+..++....--.|.+++|+|. ..+|.-...+++..+++|++.-+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 457777777777877664457999999997 669999999999999999877554221 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
++....+|+++.++|.+..+. -+.++++-.++.+|-.
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence 344556899999999886433 3788999999999943
No 263
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.56 E-value=0.044 Score=47.80 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=63.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-CCcEE-ecCCC-HHHHHHHc-CCccEEEEccCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSF-LVSRD-QDEMQAAM-GTMDGIIDTVSA 257 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-ga~~~-v~~~~-~~~~~~~~-~~~d~v~d~~g~ 257 (314)
.+.++||+|+ |.+|...++.+...|.+|+++.+++++........ ++..+ .|..+ .+.+.+.. .++|++|.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4578999997 99999999988888999999998876554332211 23222 23333 33333444 579999998774
Q ss_pred cc-------------cHHHHHHhhccC--CEEEEEcCC
Q 021300 258 VH-------------PLMPLIGLLKSQ--GKLVLVGAP 280 (314)
Q Consensus 258 ~~-------------~~~~~~~~l~~~--G~~v~~G~~ 280 (314)
.. ....+++.++.. ++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 21 134455555443 688888764
No 264
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.55 E-value=0.059 Score=46.93 Aligned_cols=75 Identities=17% Similarity=0.309 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH-------cCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
.+.+++|.|+ |++|...++.+...|++|+++.+..++..+..++.+...+ .|-.+++.+.++ .+++|++|.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999987 9999999999988999998876654433222233343222 244454433322 246999999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 265
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.55 E-value=0.02 Score=48.87 Aligned_cols=96 Identities=19% Similarity=0.170 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe----------------cCCCH-HHHHHH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL----------------VSRDQ-DEMQAA 244 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v----------------~~~~~-~~~~~~ 244 (314)
.++.+||+.|+|. |.-++.+|+ .|.+|+.++.++...+.+.++.+..... ...|. +.-.+.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 5778999999875 777777775 6999999999998887765544432100 00000 000111
Q ss_pred cCCccEEEEccCC--------cccHHHHHHhhccCCEEEEEcC
Q 021300 245 MGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 245 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
.+.||.++|...- ...+..+.++|+++|++++++.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 2468999997541 1236788999999998666644
No 266
>PRK05717 oxidoreductase; Validated
Probab=96.54 E-value=0.022 Score=49.65 Aligned_cols=76 Identities=18% Similarity=0.330 Sum_probs=54.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHH----HH---cCCccE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQ----AA---MGTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~----~~---~~~~d~ 250 (314)
..|.+++|.|+ |.+|...+..+...|++|+++.++.++..++.++++.... .|-.+.+.+. ++ .+.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45788999987 9999999999988999999998887766666666653321 2344444332 22 236899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999874
No 267
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.54 E-value=0.06 Score=39.38 Aligned_cols=86 Identities=20% Similarity=0.351 Sum_probs=60.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEE-eCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v-~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
++.|+|+|.+|.+.+.-+...| .+++++ .+++++.+++.++++..... ....+.+ +..|+||-++-... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~----~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAA----QEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHH----HHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhh----ccCCEEEEEECHHH-H
Confidence 4778899999999999999999 788855 99999999999999865432 1222332 35999999998765 4
Q ss_pred HHHHHhh---ccCCEEEEE
Q 021300 262 MPLIGLL---KSQGKLVLV 277 (314)
Q Consensus 262 ~~~~~~l---~~~G~~v~~ 277 (314)
...++.+ .++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 5554444 455666655
No 268
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.53 E-value=0.025 Score=51.19 Aligned_cols=90 Identities=19% Similarity=0.293 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~- 260 (314)
-.|.+|.|+|.|.+|...++.++.+|.+|+++.+..++.. +.+.+. ..+.+.++....|+|+.+......
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence 3678999999999999999999999999999887543211 222221 223445666678888888764322
Q ss_pred ----HHHHHHhhccCCEEEEEcCC
Q 021300 261 ----LMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~G~~ 280 (314)
-...++.|+++..+|.+|..
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECCCc
Confidence 13467788888888888773
No 269
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.051 Score=46.95 Aligned_cols=72 Identities=17% Similarity=0.051 Sum_probs=48.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHc----CCccEEEEccC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAM----GTMDGIIDTVS 256 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~----~~~d~v~d~~g 256 (314)
.+++|.|+ |++|...+..+...|++|+++++++++.+++.+... ... ..|-.+++.+.++. ...|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 46888887 999999888888889999999999877766654332 211 23445555444432 24577776665
No 270
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.046 Score=48.41 Aligned_cols=95 Identities=21% Similarity=0.325 Sum_probs=60.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH------cCCccEEE
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------MGTMDGII 252 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~------~~~~d~v~ 252 (314)
.+++|.|+|++|...+..+. .|++|+++++++++.+++.+++ +.+. -.|-.+++.+.++ .+.+|+++
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li 81 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV 81 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence 46788888999999998885 7999999999877655554433 3322 1244444332222 24699999
Q ss_pred EccCCcc------------------cHHHHHHhhccCCEEEEEcCC
Q 021300 253 DTVSAVH------------------PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 253 d~~g~~~------------------~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.++|... .+..+.+.++++|+++.+++.
T Consensus 82 ~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 82 HTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred ECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 9998431 123344555667777777654
No 271
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.034 Score=48.64 Aligned_cols=74 Identities=15% Similarity=0.287 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~d 249 (314)
+.++||.|+ |.+|..+++.+...|++|+++.+++...+++.+++ +... ..|..+.+.+... .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899987 99999999999889999999999876655544332 3322 1244444333222 23689
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 272
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.035 Score=49.26 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=71.6
Q ss_pred cccchhhhhhhhhhHhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
..+||+..+....++....--.|.+++|+|.| .+|.-.+.++...|++|++.-.... .
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~ 193 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D 193 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence 34677777777777766644579999999984 9999999999999999877633221 1
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+.+....+|+++-++|.+..+. -+.+++|..++.+|..
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 2344566899999999886332 4567999999999974
No 273
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.49 E-value=0.021 Score=50.67 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=65.8
Q ss_pred hhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccE
Q 021300 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 172 ~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~ 250 (314)
..+++..+ ...+.+++|+|+|+.+.+++..++..|+ +++++.|+.++.+++++.++... . +.. ....+|+
T Consensus 111 ~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dl 181 (272)
T PRK12550 111 AKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADI 181 (272)
T ss_pred HHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCE
Confidence 34454433 3456689999999999999999998998 69999999998888887765321 0 111 1235899
Q ss_pred EEEccCCcc-------cHHHHHHhhccCCEEEEEcCC
Q 021300 251 IIDTVSAVH-------PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 251 v~d~~g~~~-------~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+++|+.... ...-....+.+...++++-..
T Consensus 182 vINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~ 218 (272)
T PRK12550 182 LVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL 218 (272)
T ss_pred EEECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence 999985221 001123446666667766543
No 274
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.48 E-value=0.027 Score=52.83 Aligned_cols=75 Identities=20% Similarity=0.257 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC--Cc-EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g--a~-~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
.|.+++|.|+ |++|.+.++.+...|++|+++++++++..+..+..+ .. ...|-.+++.+.+..+++|++|.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4679999997 999999999888899999999988765533322222 11 123556666666667789999998874
No 275
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.021 Score=51.72 Aligned_cols=75 Identities=20% Similarity=0.195 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----C-CcE---EecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----g-a~~---~v~~~~~~~~~~~-------~~ 246 (314)
.|.+++|.|+ +++|..+++.+...|++|+++.++.++.+++.+++ + ... ..|-.+.+.++++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4678999998 99999999999889999999999987665554433 2 221 1344555433322 24
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 69999999873
No 276
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.035 Score=48.58 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=53.5
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCCcEE----ecCCCHHHHHHH------
Q 021300 181 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF----LVSRDQDEMQAA------ 244 (314)
Q Consensus 181 ~~~g~~vlI~Ga-g-~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga~~~----v~~~~~~~~~~~------ 244 (314)
+..+.++||.|+ | ++|.++++.+...|++|+++.++.++.++..++ ++...+ .|-.+++.+.++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999987 6 799999999999999999988887665544332 343222 244444433322
Q ss_pred -cCCccEEEEccCC
Q 021300 245 -MGTMDGIIDTVSA 257 (314)
Q Consensus 245 -~~~~d~v~d~~g~ 257 (314)
.+.+|++|.+.|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2468999999984
No 277
>PLN03139 formate dehydrogenase; Provisional
Probab=96.46 E-value=0.024 Score=52.76 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.|.+|.|+|.|.+|...++.++.+|.+++++.+..... +..+++|+... +.+.++....|+|+-+.......
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~~~g~~~~------~~l~ell~~sDvV~l~lPlt~~T 269 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEKETGAKFE------EDLDAMLPKCDVVVINTPLTEKT 269 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHhhcCceec------CCHHHHHhhCCEEEEeCCCCHHH
Confidence 368899999999999999999999999998887764322 23344554321 12334556688888877632211
Q ss_pred -----HHHHHhhccCCEEEEEcC
Q 021300 262 -----MPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 262 -----~~~~~~l~~~G~~v~~G~ 279 (314)
...++.|+++..+|.++.
T Consensus 270 ~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 270 RGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHHhCHHHHhhCCCCeEEEECCC
Confidence 346778888888888876
No 278
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.02 Score=49.82 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~ 247 (314)
..+.+++|.|+ |.+|..++..+...|++|+++.+++++.+++.+.+ +.+ ...|-.+++.+.+. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999997 99999999999999999999999987766654432 211 12244444333322 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 279
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.45 E-value=0.0092 Score=59.55 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=56.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-H
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD-E 240 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~-~ 240 (314)
.+++|+|+|+|+.|+.++..++..|.+|+++.+.+. ...+..+++|.+..++..- .+ .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 489999999999999999999999999999987652 1335557788876555432 11 2
Q ss_pred HHHHcCCccEEEEccCCc
Q 021300 241 MQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~ 258 (314)
+.++...+|.||.++|..
T Consensus 389 ~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 334456799999999864
No 280
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.021 Score=49.80 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.|.++||.|+ +++|...++.+...|++|+++.++.++.+++.+++ +.+. ..|-.+++.+.++ .+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4788999997 99999999999999999999999887766665543 3221 2344444433222 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 281
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.43 E-value=0.044 Score=45.75 Aligned_cols=97 Identities=23% Similarity=0.258 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHH---HHHcCCcEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~---~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
++++.+||-+|+|. |..+..+++.. +++++.++.+++..+.+ .++.+.+.+ +...+...... .+.||+|+-..
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~ 120 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRA 120 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcc
Confidence 45689999999854 55666666644 67999999988655333 334454322 11222222222 34799999653
Q ss_pred CC--cccHHHHHHhhccCCEEEEEcC
Q 021300 256 SA--VHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 256 g~--~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
.. ...+..+.+.|+++|+++.+-.
T Consensus 121 ~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 121 VASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred ccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 22 2346678899999999998843
No 282
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.41 E-value=0.019 Score=48.66 Aligned_cols=96 Identities=18% Similarity=0.277 Sum_probs=56.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hhHHHHH---HHcC-CcEEe--c-C
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAI---ERLG-ADSFL--V-S 235 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~~~~~~---~~~g-a~~~v--~-~ 235 (314)
...+|+|+|+|++|..+++.+...|. ++++++.+. .+.+.+. +++. ...+. + .
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 34779999999999999999999998 777777652 1111111 2222 11111 1 1
Q ss_pred CCHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCE-EEEEc
Q 021300 236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVG 278 (314)
Q Consensus 236 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~G 278 (314)
-+.+.+.+....+|+||+|+.+...-...-+.....++ ++..+
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISAA 143 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 12234445567899999999877533333334344444 44433
No 283
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.059 Score=46.81 Aligned_cols=100 Identities=15% Similarity=0.245 Sum_probs=61.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHc---CCcEE---ecCCCHHH----HHHH------
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL---GADSF---LVSRDQDE----MQAA------ 244 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~---ga~~~---v~~~~~~~----~~~~------ 244 (314)
.+.++||.|+ +++|.++++.+...|+++++.. +..++.+++.+++ +.+.. .|-.+.+. +.++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4678999987 9999999999999999988765 4444444433322 32211 12233221 1111
Q ss_pred -cC--CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 245 -MG--TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 245 -~~--~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
.+ ++|+++.++|... .+..+++.+++.|+++.+++..+
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12 6999999987320 12234556667799999987643
No 284
>PRK06194 hypothetical protein; Provisional
Probab=96.40 E-value=0.029 Score=49.84 Aligned_cols=75 Identities=19% Similarity=0.375 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |++|...++.+...|++|+++.++.+...+..+++ +.+.. .|-.+.+.+.++ .+.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999987 99999999998889999999998876655554443 33221 244444433332 2368
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
No 285
>PRK07985 oxidoreductase; Provisional
Probab=96.39 E-value=0.071 Score=47.75 Aligned_cols=100 Identities=17% Similarity=0.142 Sum_probs=62.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh--hhHHHH---HHHcCCcE---EecCCCHHHHHH-------Hc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEA---IERLGADS---FLVSRDQDEMQA-------AM 245 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~---~~~~ga~~---~v~~~~~~~~~~-------~~ 245 (314)
-.+.++||.|+ |++|...++.+...|++|+++.++. +..+++ .++.+.+. ..|-.+++.+.+ ..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999997 9999999999999999998876542 222233 22334322 124444433322 22
Q ss_pred CCccEEEEccCCc--------------------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300 246 GTMDGIIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 246 ~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+++|+++.+.|.. ..+..+++.|+.+|+++.+++..
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 4689999988731 01223445556789999987753
No 286
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.39 E-value=0.067 Score=46.87 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=61.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChh------hHHHHHHHcCCcE--EecCCCHHHHHHH-------
Q 021300 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAIERLGADS--FLVSRDQDEMQAA------- 244 (314)
Q Consensus 183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~------~~~~~~~~~ga~~--~v~~~~~~~~~~~------- 244 (314)
.|.+++|.|+ +++|.+.++.+...|++|++..++.+ ...++.++.+... ..|-.+++.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4678999986 48999999999889999987754322 2223322222111 1344444333222
Q ss_pred cCCccEEEEccCCcc-----------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 245 MGTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 245 ~~~~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
.+.+|+++++.|... ..+.+++.|+++|+++.+++..+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 246999999987320 12345666777899998876543
No 287
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.39 E-value=0.052 Score=46.74 Aligned_cols=74 Identities=20% Similarity=0.425 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
+.++||.|+ |.+|...+..+...|++++++ .+++++..++.+.+ +.... .|-.+++.+.+. .+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 999999998888889999888 77766554444332 22221 244444433322 1379
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 288
>PLN02928 oxidoreductase family protein
Probab=96.39 E-value=0.031 Score=51.38 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----CcEEecC-CCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSFLVS-RDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~~~v~~-~~~~~~~~~~~~~d~v~d~~ 255 (314)
-.|.++.|+|.|.+|..+++.++.+|++|+++.+...+... ..++ ...+++. ...+.+.++....|+|+.+.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 45889999999999999999999999999998876322111 1111 0111110 11223445566789999887
Q ss_pred CCcc-----cHHHHHHhhccCCEEEEEcCC
Q 021300 256 SAVH-----PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 256 g~~~-----~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.... .-...+..|+++..+|.+|..
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 5321 124578889999999998863
No 289
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.079 Score=47.37 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=62.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHH---HHcCCcEE---ecCCCHHHHHHH-------cC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADSF---LVSRDQDEMQAA-------MG 246 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~---~~~ga~~~---v~~~~~~~~~~~-------~~ 246 (314)
-++.++||.|+ |.+|...+..+...|++|+++.+...+ .+.+. +..+.+.. .|-.+.+.+.++ .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45788999997 999999999888899999988876432 22222 22243322 233343332221 24
Q ss_pred CccEEEEccCCcc--------------------------cHHHHHHhhccCCEEEEEcCCC
Q 021300 247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 247 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+|++|.++|... .+..+++.+++.|+++.+++..
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 6899999887421 0122344556678999988743
No 290
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.032 Score=49.59 Aligned_cols=96 Identities=20% Similarity=0.265 Sum_probs=71.9
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++....--.|.+++|+|. ..+|.-.+.++...|++|++.-.... .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence 467776777777777664568999999997 66699999999999999987432211 12
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+..+.. +.++++-.++.+|...
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 3445568999999998764433 8899999999999753
No 291
>PLN02253 xanthoxin dehydrogenase
Probab=96.37 E-value=0.031 Score=49.43 Aligned_cols=75 Identities=21% Similarity=0.338 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE---EecCCCHHHHHHH-------cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~---~v~~~~~~~~~~~-------~~~~d 249 (314)
.+.++||.|+ |.+|.+.++.+...|++|+++.+.++..+++.++++. +. ..|-.+++.+.+. .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999998888999999998887766666555532 11 1344555443332 24799
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999874
No 292
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.37 E-value=0.034 Score=45.75 Aligned_cols=91 Identities=25% Similarity=0.343 Sum_probs=63.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe--cCCCHHHHHHHcCCccEEEEccCCc--c-
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAV--H- 259 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v--~~~~~~~~~~~~~~~d~v~d~~g~~--~- 259 (314)
+|.|+|+ |-+|...++-|+.+|-.|++++|++.+.... ....++ |--+++.+.+...++|+||++.|.. .
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5788998 9999999999999999999999999866432 111111 1122334446667999999998754 1
Q ss_pred ------cHHHHHHhhccC--CEEEEEcCC
Q 021300 260 ------PLMPLIGLLKSQ--GKLVLVGAP 280 (314)
Q Consensus 260 ------~~~~~~~~l~~~--G~~v~~G~~ 280 (314)
..+.++..|+.- -|+..+|.-
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 133466677653 478888763
No 293
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.37 E-value=0.038 Score=49.93 Aligned_cols=92 Identities=18% Similarity=0.264 Sum_probs=62.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc--
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 260 (314)
.+|.|+|+|.+|.+.+..++..|. +|+++++++++.+.+ ++.|....+.. +. .+....+|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~-~~---~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTT-SA---AEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecC-CH---HHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999998888874 788888888766554 45675221111 11 2234579999999986531
Q ss_pred -HHHHHHhhccCCEEEEEcCCC
Q 021300 261 -LMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 261 -~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+......++++..++.+|...
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccch
Confidence 233344566777777777643
No 294
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.095 Score=46.14 Aligned_cols=74 Identities=15% Similarity=0.254 Sum_probs=47.3
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCh---hhHHHHHHHcCCc--EEecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~~~~---~~~~~~~~~~ga~--~~v~~~~~~~~~~~-------~~~ 247 (314)
.|.++||.|++ ++|.++++.+...|+++++..++. +..+++.++.+.. ...|-.+++.+.++ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 46789999873 799999998888999998877763 2223333333321 11344554433322 246
Q ss_pred ccEEEEccC
Q 021300 248 MDGIIDTVS 256 (314)
Q Consensus 248 ~d~v~d~~g 256 (314)
+|++|+++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999997
No 295
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.074 Score=47.43 Aligned_cols=76 Identities=25% Similarity=0.341 Sum_probs=50.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh---------hhHHHHHHHc---CCcEE---ecCCCHHHHH---
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADSF---LVSRDQDEMQ--- 242 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~---------~~~~~~~~~~---ga~~~---v~~~~~~~~~--- 242 (314)
-.+.++||.|+ +++|.+.++.+...|++++++.+.. ++..++.+++ +.+.. .|-.+++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45788999987 9999999998888999998887654 4444443333 33322 2444443322
Q ss_pred -HH---cCCccEEEEccCC
Q 021300 243 -AA---MGTMDGIIDTVSA 257 (314)
Q Consensus 243 -~~---~~~~d~v~d~~g~ 257 (314)
++ .+.+|++|++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 22 2479999999874
No 296
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.35 E-value=0.071 Score=42.25 Aligned_cols=96 Identities=15% Similarity=0.076 Sum_probs=69.4
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+|+........++..+.--.|.+++|+|. ..+|.-.+.++...|+++++..+.....+
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 456666666666766664468999999997 99999999999999999988765443222
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+....+|+++-++|....+ --+.+++|-.++.+|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i--~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKV--PTEWIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCcc--CHHHcCCCCEEEEcCCCc
Confidence 2334578888888877533 245688888888887654
No 297
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.033 Score=48.52 Aligned_cols=75 Identities=21% Similarity=0.326 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |++|...+..+...|++|+++.+++++.+++.+++ +.+.. .|-.+++.+.++ .+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999987 99999999999889999999999887766665443 33222 244444433322 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999874
No 298
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.35 E-value=0.12 Score=40.26 Aligned_cols=90 Identities=14% Similarity=0.357 Sum_probs=62.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHCC--CeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH-----------------
Q 021300 187 VGVVGL-GGLGHVAVKFAKAMG--VKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ----------------- 242 (314)
Q Consensus 187 vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~--~~~~----------------- 242 (314)
|.|+|+ |++|..+..+.+.+. .+++..+ ++-+...+.+++|....++..++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578999 999999999999987 4666554 455677788888988776655543 1222
Q ss_pred ---HHc--CCccEEEEccCCcccHHHHHHhhccCCEEEE
Q 021300 243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL 276 (314)
Q Consensus 243 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 276 (314)
++. ..+|+++.++.+...+...+.+++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 111 2689999998777778888888887765543
No 299
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.34 E-value=0.1 Score=45.39 Aligned_cols=76 Identities=22% Similarity=0.305 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCc--E-EecCCCHHHHHH----H---cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--S-FLVSRDQDEMQA----A---MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~--~-~v~~~~~~~~~~----~---~~~ 247 (314)
-+|.+++|.|+ |.+|...++.+...|++++++.++++...++.++ .+.. . ..|-.+++.+.. + .+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35789999987 9999999998888899999999987765554433 3422 1 124444433222 2 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|.++.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 300
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.031 Score=47.92 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=52.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHH----cCCccEEEEccC
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA----MGTMDGIIDTVS 256 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~----~~~~d~v~d~~g 256 (314)
+++|.|+ |.+|...++.+...|++++++.++.++.+++.++++...+ .|-.+++.+.++ .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5888887 9999999999988999999999998877777666655433 344555443332 236899999865
No 301
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.33 E-value=0.023 Score=51.61 Aligned_cols=74 Identities=20% Similarity=0.225 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
++.+++|.|+ |++|...++.+...|++|+++.++.++.+++.+++.. .. ..|-.+.+.+.+. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999987 9999999998888999999999988877666665531 11 1244444433322 1359
Q ss_pred cEEEEccC
Q 021300 249 DGIIDTVS 256 (314)
Q Consensus 249 d~v~d~~g 256 (314)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 302
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.027 Score=49.08 Aligned_cols=76 Identities=21% Similarity=0.304 Sum_probs=53.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHHH-------cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~~-------~~~ 247 (314)
-++.+++|.|+ |.+|...+..+...|++|+++.+++++.+.+.+++ +.+ ...|-.+++.+... .+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35688999997 99999999999999999999999887665655443 222 12344444333221 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999999874
No 303
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.33 E-value=0.026 Score=49.89 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=54.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----Cc-EEecCCCHH-------HHHHHcCCc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD-SFLVSRDQD-------EMQAAMGTM 248 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~-~~v~~~~~~-------~~~~~~~~~ 248 (314)
..|+.|||.|+ +++|.+.++-...+|+++++.+.+.+...+..++.. +. ...|-.+.+ .+++-.+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 57999999987 999988888777889999899888776666555443 32 333444443 333444579
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++++++|-
T Consensus 116 ~ILVNNAGI 124 (300)
T KOG1201|consen 116 DILVNNAGI 124 (300)
T ss_pred eEEEecccc
Confidence 999999983
No 304
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.32 E-value=0.035 Score=50.82 Aligned_cols=107 Identities=21% Similarity=0.286 Sum_probs=69.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.|.++.|+|.|.+|...++.++.+|.+|+++.+..... ..+.++... . .+.++....|+|+-++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY----R---PLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence 68899999999999999999999999999888765432 223444421 1 12344556888888876332
Q ss_pred --cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 260 --PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.-...+..|+++..++.++.. +.++-+...-.+++.+|.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg-~~vd~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARG-KVVDTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCc-hhcCHHHHHHHHHcCCeE
Confidence 123567788888888888763 223333333333444444
No 305
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.32 E-value=0.027 Score=48.23 Aligned_cols=94 Identities=18% Similarity=0.125 Sum_probs=60.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEe---------cCCC-----HHHH---HH
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---------VSRD-----QDEM---QA 243 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v---------~~~~-----~~~~---~~ 243 (314)
+.++.+||+.|+|. |.-++.+|. .|.+|+.++.++...+.+.++.+..... .... .|.. ..
T Consensus 35 ~~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~ 112 (218)
T PRK13255 35 LPAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA 112 (218)
T ss_pred CCCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence 45678999999874 777777775 6999999999998887765554432100 0000 0111 01
Q ss_pred HcCCccEEEEccCC--------cccHHHHHHhhccCCEEEE
Q 021300 244 AMGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVL 276 (314)
Q Consensus 244 ~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~ 276 (314)
..+.||.|+|...- ...+..+.++|+++|++.+
T Consensus 113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 12368999996631 1237788899999987544
No 306
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.036 Score=47.91 Aligned_cols=75 Identities=21% Similarity=0.440 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHH----HH---cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQ----AA---MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~----~~---~~~~ 248 (314)
++.++||.|+ |++|..+++.+...|++++++.++.++..++.++ .+.+. ..|-.+++.+. .. .+.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999997 9999999999999999999999887665555433 24332 22333433322 22 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999873
No 307
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.077 Score=46.88 Aligned_cols=74 Identities=19% Similarity=0.277 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--cE---EecCCCHHHHHH---H---cCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DS---FLVSRDQDEMQA---A---MGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~~---~v~~~~~~~~~~---~---~~~~ 248 (314)
+.++||.|+ |.+|...+..+...|++|++++++++...++.+. .+. .. ..|..+++.+.. . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 467899997 9999999999888999999999987765554332 221 11 224455443322 2 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999874
No 308
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.32 E-value=0.026 Score=50.97 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=72.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
+...+++|+|+|..|...++.+.. .+. ++.+..+++++.+++++++... .+. . +...+....+|+|+.++.+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence 566889999999999998888864 565 7888999998888888877531 111 1 2223445689999999976
Q ss_pred cccHHHHHHhhccCCEEEEEcCCC-CCcccchh
Q 021300 258 VHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAF 289 (314)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~ 289 (314)
...+-.. .+++|--++.+|... +..+++..
T Consensus 199 ~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 199 RTPVYPE--AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred CCceeCc--cCCCCCEEEecCCCCCCcccCCHH
Confidence 5433333 378888888889764 44566643
No 309
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.31 E-value=0.099 Score=44.78 Aligned_cols=114 Identities=12% Similarity=-0.054 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-.+.+|||+|+|.++.-=+..+...|++|+++...-. +..++.+ .|.-..+ ....+ .....++++||-++++...
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~-~r~~~--~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLI-KGNYD--KEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEE-eCCCC--hHHhCCCcEEEECCCCHHH
Confidence 3577899999999998888888889999988876532 3334432 2321222 11111 1123579999999999874
Q ss_pred HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcC-ceeEe
Q 021300 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-EEEDS 299 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~ 299 (314)
-.......+..+.++.+...+...+|-...+..+ .++|.
T Consensus 99 N~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~Ia 138 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFA 138 (223)
T ss_pred HHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEE
Confidence 4444444455576666654444444544444443 45554
No 310
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.092 Score=44.58 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=50.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-CcE-EecCCCHHHHHHHcC---CccEEEEccCC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG---TMDGIIDTVSA 257 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~~-~v~~~~~~~~~~~~~---~~d~v~d~~g~ 257 (314)
.++||.|+ |.+|...+..+... .+|+++.++.++..++.+... ... ..|-.+++.+.+... +.|.+|.++|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57899987 99999888877777 999999998877666544432 222 124445555554433 69999999874
No 311
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.28 E-value=0.038 Score=48.21 Aligned_cols=75 Identities=20% Similarity=0.341 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE---ecCCCHHHHHHH-------cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~---v~~~~~~~~~~~-------~~~~d~v 251 (314)
.+.++||.|+ |.+|...++.+...|++|+++.++.++.+++.++++.... .|-.+++.+.++ .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3578999997 9999999999999999999999998877777666553211 233344332222 2468999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 312
>PRK07069 short chain dehydrogenase; Validated
Probab=96.28 E-value=0.067 Score=46.27 Aligned_cols=95 Identities=17% Similarity=0.243 Sum_probs=61.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHHHHcC----CcE----EecCCCHHHHHH-------HcCCcc
Q 021300 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLG----ADS----FLVSRDQDEMQA-------AMGTMD 249 (314)
Q Consensus 187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~~~~g----a~~----~v~~~~~~~~~~-------~~~~~d 249 (314)
++|.|+ |.+|...++.+...|++|+++.++ .++.+++.+++. ... ..|-.+++.+.+ ..+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788887 999999999998899999999887 555545544432 111 124445443322 234689
Q ss_pred EEEEccCCcc-------------------------cHHHHHHhhcc--CCEEEEEcCCC
Q 021300 250 GIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPE 281 (314)
Q Consensus 250 ~v~d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~ 281 (314)
+++.+.|... ....+++.++. .|+++.+++..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~ 140 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVA 140 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChh
Confidence 9999987321 12345555543 47899887753
No 313
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.28 E-value=0.055 Score=46.44 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
++.++||.|+ |.+|...++.+...|.+|+++.+++++...+... .+.+.. .|-.+++.+... .+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999999988999999999987765444332 333222 244444332221 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999864
No 314
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.28 E-value=0.024 Score=51.97 Aligned_cols=76 Identities=22% Similarity=0.377 Sum_probs=49.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------hhHH---HHHHHcCCc----EEec
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS---EAIERLGAD----SFLV 234 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---------------------~~~~---~~~~~~ga~----~~v~ 234 (314)
..+|+|+|+|++|..++..+...|. ++++++++. .+.+ +.++++..+ .+..
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~ 103 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT 103 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence 4679999999999999999999998 677776653 1111 122233221 1211
Q ss_pred CCCHHHHHHHcCCccEEEEccCCcc
Q 021300 235 SRDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 235 ~~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
.-.++.+.++..++|+|+|++.+..
T Consensus 104 ~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 104 DVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred cCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 2223455666678999999998765
No 315
>PRK04457 spermidine synthase; Provisional
Probab=96.27 E-value=0.085 Score=46.56 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCC----c--EEecCCCHHHHHHHcCCccEEEEc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA----D--SFLVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga----~--~~v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
.++.+||++|+|. |..+..+++.. +.++++++.+++-.+.+.+.++. + .++..+..+.+....+.+|+|+-.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999865 77777887776 56899999998877655555542 1 233333345555555679998732
Q ss_pred c--CC--------cccHHHHHHhhccCCEEEEE
Q 021300 255 V--SA--------VHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 255 ~--g~--------~~~~~~~~~~l~~~G~~v~~ 277 (314)
. +. ...+..+.+.|+++|+++.-
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 2 11 23477888999999999874
No 316
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.27 E-value=0.096 Score=45.29 Aligned_cols=75 Identities=20% Similarity=0.324 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~ 247 (314)
++.++||.|+ |.+|...+..+...|++++++ .++.++.+++.++ .+.... .|-.+++.+..+ .+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 999999999999999998764 5665554444332 343222 233444433222 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 317
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.14 Score=44.02 Aligned_cols=99 Identities=16% Similarity=0.227 Sum_probs=62.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcEE---ecCCCHHHHHHH-------cC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADSF---LVSRDQDEMQAA-------MG 246 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~~---v~~~~~~~~~~~-------~~ 246 (314)
.++.++||.|+ |.+|...++.+...|++++++.++... ..++.+ +.+.... .|-.+++.+.+. .+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35678999987 999999999999999998877665332 222222 2343211 233444333222 24
Q ss_pred CccEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCC
Q 021300 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 247 ~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~ 280 (314)
++|++|.+.|... .+..+++.++.+|+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 7999999987421 122344555667899999764
No 318
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.078 Score=46.63 Aligned_cols=72 Identities=24% Similarity=0.377 Sum_probs=49.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCccEE
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMDGI 251 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d~v 251 (314)
++||.|+ |.+|...++.+...|++|++++++.++.+++.+.+ +.+.. .|-.+++.+.+ ..+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6889987 99999999988889999999999887665554332 33321 23333332222 22479999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
No 319
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.25 E-value=0.028 Score=51.33 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
+...+++|+|+|..+.+.+..+. ..+. ++.++.+++++.+++++++ |.+. ....+ +.+....+|+|+.++
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v-~~~~~---~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDV-TAATD---PRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceE-EEeCC---HHHHhccCCEEEEec
Confidence 45678999999999988888776 4675 7889999998888877765 4322 22222 234446799999999
Q ss_pred CCcccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300 256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA 288 (314)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~ 288 (314)
++... --..+.++++-.+..+|... .+.+++.
T Consensus 203 ~s~~p-~i~~~~l~~g~~i~~vg~~~p~~rEld~ 235 (326)
T TIGR02992 203 PSETP-ILHAEWLEPGQHVTAMGSDAEHKNEIDP 235 (326)
T ss_pred CCCCc-EecHHHcCCCcEEEeeCCCCCCceecCH
Confidence 76531 11234678877788888653 3445554
No 320
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.24 E-value=0.039 Score=49.13 Aligned_cols=100 Identities=24% Similarity=0.261 Sum_probs=69.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEe-------cCCCHHHHH----HH---c
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFL-------VSRDQDEMQ----AA---M 245 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v-------~~~~~~~~~----~~---~ 245 (314)
++--+++|.|+ .++|++.+..++..|+.|.++.++.++.+++.++++-. .+. |-.+.+.+. ++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 55577888865 99999999999999999999999999999998888732 211 112222222 22 2
Q ss_pred CCccEEEEccCCc-------------------------ccHHHHHHhhcc---CCEEEEEcCCC
Q 021300 246 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKS---QGKLVLVGAPE 281 (314)
Q Consensus 246 ~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~---~G~~v~~G~~~ 281 (314)
..+|.+|.|.|.. .+....+..|+. .|+++++++..
T Consensus 111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~ 174 (331)
T KOG1210|consen 111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL 174 (331)
T ss_pred CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence 4689999999843 123344555543 35999998753
No 321
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.23 E-value=0.089 Score=45.57 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=50.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHH-------HHHcCCccE
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEM-------QAAMGTMDG 250 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~-------~~~~~~~d~ 250 (314)
.++||.|+ |.+|...+..+...|++|+++++++++.+.+.+.+ +... ..|-.+++.+ .+..++.|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57899997 99999999998888999999999887665554432 3221 1244555422 222346899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
+|.+.+.
T Consensus 82 vi~~a~~ 88 (255)
T TIGR01963 82 LVNNAGI 88 (255)
T ss_pred EEECCCC
Confidence 9998864
No 322
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.23 E-value=0.067 Score=43.14 Aligned_cols=73 Identities=23% Similarity=0.351 Sum_probs=47.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCC--hhhHHHHHHHc---CCcEEe---cCCCHHHHH-------HHcCC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAIERL---GADSFL---VSRDQDEMQ-------AAMGT 247 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~--~~~~~~~~~~~---ga~~~v---~~~~~~~~~-------~~~~~ 247 (314)
+++||.|+ +++|...++.+...|+ +++++.++ .++..++.+++ +....+ |-.+++.++ +..+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36889997 9999999988888876 66677777 45555554433 432222 333443222 22347
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
No 323
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.22 E-value=0.06 Score=45.78 Aligned_cols=114 Identities=17% Similarity=0.056 Sum_probs=75.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-.|.+|||+|+|.+|.-=+.++...|++++++.... ++...+.++.+.+.+ . .. .-.+....+++||-++++...
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~-~-~~--~~~~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWI-E-RE--FDAEDLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchh-h-cc--cChhhhcCceEEEEeCCCHHH
Confidence 357789999999999998999999999999988776 455555544442221 1 11 111222349999999999876
Q ss_pred HHHHHHhhccCCEEEEEcCCCCCcccchhh-hhcCceeEe
Q 021300 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS-LLMGEEEDS 299 (314)
Q Consensus 261 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~-~~~~~~~i~ 299 (314)
-.......++.+.++.+...+...++-+-. +-...+.|.
T Consensus 86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~ia 125 (210)
T COG1648 86 NERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIA 125 (210)
T ss_pred HHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEE
Confidence 666777777888888887655544444433 333444443
No 324
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.038 Score=48.26 Aligned_cols=74 Identities=20% Similarity=0.260 Sum_probs=52.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--c--E-EecCCCHHHHHHH-------cCCccE
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D--S-FLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~--~-~v~~~~~~~~~~~-------~~~~d~ 250 (314)
+.++||.|+ |.+|...+..+...|+++++++++.++..++.+++.. + . ..|-.+++.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 357999987 9999999999998999999999998877666655432 1 1 1244444433332 235899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999873
No 325
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.18 E-value=0.088 Score=48.78 Aligned_cols=76 Identities=12% Similarity=0.133 Sum_probs=47.1
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHCCCeEEEEeCCh---h------------hHHHHHHHcCCcEE-e--cCCCHHH
Q 021300 182 KPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSP---S------------KKSEAIERLGADSF-L--VSRDQDE 240 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~--a~~~a~~~g~~vi~v~~~~---~------------~~~~~~~~~ga~~~-v--~~~~~~~ 240 (314)
..|.++||.|+ +++|++ .++.+ ..|++++++.... + ...+++++.|.... + |-.+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 44678899987 899999 45555 7899988877322 1 12344556675422 2 3333322
Q ss_pred -------HHHHcCCccEEEEccCCc
Q 021300 241 -------MQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 241 -------~~~~~~~~d~v~d~~g~~ 258 (314)
+.+..+++|+++++++..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 222235799999998755
No 326
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.18 E-value=0.038 Score=44.83 Aligned_cols=96 Identities=21% Similarity=0.314 Sum_probs=61.7
Q ss_pred cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
..+|++..+.+..++....--.|.+++|+|. ..+|.-...+++..|++|++.-...+..++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------ 75 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ 75 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------
Confidence 4567777777777877665578999999997 789999999999999999876555433332
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
....+|+|+-++|.+..+ --+.++++..++.+|..
T Consensus 76 ---~~~~ADIVVsa~G~~~~i--~~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 76 ---ITRRADIVVSAVGKPNLI--KADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ---HHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ---eeeeccEEeeeecccccc--ccccccCCcEEEecCCc
Confidence 334578888888876532 23467888888888864
No 327
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.18 E-value=0.046 Score=49.69 Aligned_cols=108 Identities=22% Similarity=0.275 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccC-Cccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS-AVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g-~~~~ 260 (314)
-.|.++-|+|.|.+|.+.++.++.+|++++...+.+. .+..+.+++.++ + +.++....|++.-+.. +..+
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~------~-l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV------D-LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec------c-HHHHHHhCCEEEEeCCCChHH
Confidence 4589999999999999999999999999999998864 334345555543 1 3455566788766554 2221
Q ss_pred ----HHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 261 ----LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
-...+..|++++.+|-+|.- +-++-...--.+++.+|.
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaRG-~~VDe~ALi~AL~~g~i~ 256 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTARG-GLVDEQALIDALKSGKIA 256 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCCc-cccCHHHHHHHHHhCCcc
Confidence 24467788888888888773 223333333333444444
No 328
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.18 E-value=0.066 Score=46.04 Aligned_cols=71 Identities=23% Similarity=0.405 Sum_probs=55.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccCC
Q 021300 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 187 vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
|+|+|+ |.+|...++.+...+.+|.+++|++.. .....+..|++.+ .|..+++.+.+...++|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999988999999998642 2233356788644 3566778888888899999999983
No 329
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.17 E-value=0.043 Score=49.08 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=70.9
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEe-CChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~-~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
.+||+..+.+..|+....--.|.+|+|+| .+.+|.-.+.++...|++|++.. ++. .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~--------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-D--------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-C---------------------
Confidence 46777777777777665446899999999 59999999999999999998874 332 1
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
+.+.....|+|+-++|....+...+ +++|..++.+|...
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin~ 233 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGINR 233 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCcc
Confidence 1234455889999999876444433 88999999998753
No 330
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=96.17 E-value=0.089 Score=42.21 Aligned_cols=98 Identities=20% Similarity=0.339 Sum_probs=62.2
Q ss_pred EEEEEcCChHHHHHHHHHHHC-CCeEEEEeC--ChhhHHHHHH---HcCC---cE---------------EecCCCHHHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIST--SPSKKSEAIE---RLGA---DS---------------FLVSRDQDEM 241 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~--~~~~~~~~~~---~~ga---~~---------------~v~~~~~~~~ 241 (314)
+|.|+|.|.+|...++.+... +.+++++.. +++....+.+ ..|. +. ++..++|..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 578899999999888887754 567776554 3333344433 1121 10 1112334444
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP 283 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~ 283 (314)
.+..-++|+|+||+|.-.....+...+..|-+-|+++.+..+
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~ 123 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKD 123 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCC
Confidence 444457999999999755566677888888788888877543
No 331
>PRK05855 short chain dehydrogenase; Validated
Probab=96.14 E-value=0.067 Score=52.35 Aligned_cols=76 Identities=22% Similarity=0.241 Sum_probs=53.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~ 247 (314)
-.+.++||.|+ |++|...++.+...|++|+++.++.++.+++.+. .|.+. -.|-.+++.+.++ .+.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 34678999987 9999999999998999999999988766555443 24322 1344554433322 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|+++|.
T Consensus 393 id~lv~~Ag~ 402 (582)
T PRK05855 393 PDIVVNNAGI 402 (582)
T ss_pred CcEEEECCcc
Confidence 9999999984
No 332
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.14 E-value=0.048 Score=49.82 Aligned_cols=94 Identities=20% Similarity=0.265 Sum_probs=66.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
-.+.+|+|+|+ |.+|..+++.+.. .|. +++++.++.++..++.++++...+ ..+.+....+|+|+.+++..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 57789999998 9999998888864 464 888888888887777776652221 12334556799999998875
Q ss_pred ccHHHHHHhhccCCEEEEEcCCC
Q 021300 259 HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.....-...+++.-.+++++.|.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 43212224557778888888874
No 333
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.13 E-value=0.088 Score=49.28 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHH------HHHHHc-CCcEE-ecCCCHHHHHHHcC----C
Q 021300 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAIERL-GADSF-LVSRDQDEMQAAMG----T 247 (314)
Q Consensus 181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~------~~~~~~-ga~~~-v~~~~~~~~~~~~~----~ 247 (314)
-..+.+|||.|+ |.+|..+++.+...|.+|++++++..... +..+.. +...+ .|..+++.+.+... +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 367789999998 99999999999889999999998764321 111122 23322 35556665555433 6
Q ss_pred ccEEEEccCCcc------------cHHHHHHhhccC--CEEEEEcCC
Q 021300 248 MDGIIDTVSAVH------------PLMPLIGLLKSQ--GKLVLVGAP 280 (314)
Q Consensus 248 ~d~v~d~~g~~~------------~~~~~~~~l~~~--G~~v~~G~~ 280 (314)
+|+||+|.+... ....+++.++.. +++|.++..
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 999999886421 122344544443 478888764
No 334
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.13 E-value=0.037 Score=49.22 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=78.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CC---cEEecCCCHH----HHHHHcC--C
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA---DSFLVSRDQD----EMQAAMG--T 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga---~~~v~~~~~~----~~~~~~~--~ 247 (314)
+-|++.+|.|+ .++|.+-+.-+..+|.+++++.|+.+++++..++. ++ ..++|...++ .+++... .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 56788899998 88997666555558999999999999987776655 32 1234544433 3333333 3
Q ss_pred ccEEEEccCCcc---------------------------cHHHHHHhh--ccCCEEEEEcCCCCCcccchhhhhcCceeE
Q 021300 248 MDGIIDTVSAVH---------------------------PLMPLIGLL--KSQGKLVLVGAPEKPLELPAFSLLMGEEED 298 (314)
Q Consensus 248 ~d~v~d~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i 298 (314)
+-+.++++|-.. ..+..+..| +..|.++.+|+..+-.++|....+.-.+..
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~ 206 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAF 206 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHH
Confidence 566888887321 111222223 467999999998888888888877766553
No 335
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.12 E-value=0.068 Score=49.07 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----CcE-EecCCCHHHHHHHcC--CccEEEEc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMG--TMDGIIDT 254 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a~~-~v~~~~~~~~~~~~~--~~d~v~d~ 254 (314)
.|.++||.|+ |.+|...++.+...|.+|+++.+.........+.++ ... ..|-.+.+.+.++.. ++|+||++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999997 999999999999999999998877654333322222 111 124445555555433 57999999
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 873
No 336
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.11 E-value=0.047 Score=46.91 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---cCCccEEEEc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---MGTMDGIIDT 254 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~~~~d~v~d~ 254 (314)
+.++||.|+ +++|...++.+...|++|+++.+++++..+..+..++..+ .|-.+++.+. +. .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 457899987 9999999999988999999999887654444445554322 2434443322 22 2469999999
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 337
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.09 E-value=0.11 Score=45.31 Aligned_cols=73 Identities=27% Similarity=0.330 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHH----HH---cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQ----AA---MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~----~~---~~~~ 248 (314)
.+.++||.|+ |++|...++.+...|++|+++.+++. ..++.++ .+.+. ..|-.+++.+. ++ .+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 99999999999989999999888753 2233333 24332 12444443222 22 2469
Q ss_pred cEEEEccC
Q 021300 249 DGIIDTVS 256 (314)
Q Consensus 249 d~v~d~~g 256 (314)
|+++.++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999987
No 338
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.05 Score=47.32 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE-Ee--cCCCHHHHHHH-------cCCcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-FL--VSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~-~v--~~~~~~~~~~~-------~~~~d 249 (314)
|.++||.|+ |++|...++.+...|++|+++.++.++.+++.+++ +.+. ++ |-.+++.+.++ .+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 467899987 99999999999999999999998877665554433 2221 22 44444333222 24689
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
+++++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 339
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.09 E-value=0.038 Score=47.57 Aligned_cols=75 Identities=21% Similarity=0.362 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.+++|.|+ |.+|...+..+...|++|+++.+++++..++.+++ +.... .|-.+++.+.+. .+.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999987 99999999988889999999999877655544333 32221 233444433222 2479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 340
>PRK08589 short chain dehydrogenase; Validated
Probab=96.07 E-value=0.048 Score=48.15 Aligned_cols=74 Identities=15% Similarity=0.330 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHH-------HcCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~-------~~~~~ 248 (314)
.+.++||.|+ +++|...++.+...|++|+++.++ ++..++.+++ +.+. ..|-.+++.+.+ ..+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 4678999997 999999999988899999999988 5544444433 3221 234444433322 22468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 341
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.044 Score=47.87 Aligned_cols=75 Identities=20% Similarity=0.326 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE-E--ecCCCHHHHHHH---cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-F--LVSRDQDEMQAA---MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~-~--v~~~~~~~~~~~---~~~~d~v 251 (314)
.+.++||.|+ +++|...++.+...|++|+++.+++++.+++.+++ +.+. + .|-.+++.+.++ .+.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4688999987 99999999999889999999999887665554433 3221 1 244444443332 3479999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999873
No 342
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.04 E-value=0.16 Score=43.89 Aligned_cols=74 Identities=23% Similarity=0.281 Sum_probs=47.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHH---HcCCcEE---ecCCCHHHHHH-------HcCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADSF---LVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~---~~ga~~~---v~~~~~~~~~~-------~~~~~ 248 (314)
+.++||.|+ |.+|...++.+...|+++++..+ ...+..+..+ ..+.+.. .|-.+.+.+.+ ..+++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 567899987 99999999999999999887543 3333333322 2344332 34444433222 22479
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 83 d~li~~ag~ 91 (246)
T PRK12938 83 DVLVNNAGI 91 (246)
T ss_pred CEEEECCCC
Confidence 999999985
No 343
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.04 E-value=0.061 Score=49.12 Aligned_cols=105 Identities=19% Similarity=0.237 Sum_probs=67.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.|.+|.|+|.|.+|...++.++.+|.+|+++++.+...... .. .. +.+.++....|+|+.+.....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 67889999999999999999999999999998876432211 00 00 123345567888888876442
Q ss_pred --cHHHHHHhhccCCEEEEEcCCCCCcccchhhhhcCceeEe
Q 021300 260 --PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGEEEDS 299 (314)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~ 299 (314)
.....+..|+++..+|.++.. .-++-+...-.++..++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aRG-~~vd~~aL~~aL~~g~i~ 254 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAARG-AVINTPDLIAAVNDGTLL 254 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCCc-cccCHHHHHHHHHcCCee
Confidence 123456778888888888763 223333333333444443
No 344
>PRK12743 oxidoreductase; Provisional
Probab=96.04 E-value=0.16 Score=44.24 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-hhhHHHHH---HHcCCcEE---ecCCCHHHHHH-------HcCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAI---ERLGADSF---LVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~-~~~~~~~~---~~~ga~~~---v~~~~~~~~~~-------~~~~~ 248 (314)
+.++||.|+ +.+|..+++.+...|++|+++.+. .+..+++. +..+.+.. .|-.+++.+.. ..+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999987 999999999999999999887654 33333332 23453321 34444433222 22468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999873
No 345
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.03 E-value=0.074 Score=51.20 Aligned_cols=72 Identities=25% Similarity=0.281 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhh----HHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~----~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
..+.+++|+|+|.+|+.++.+++..|.+|++++..+.. ..+..++.|.+....... . ....+|+|+.+.|.
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T----LPEDTDLVVTSPGW 88 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c----ccCCCCEEEECCCc
Confidence 45789999999999999999999999999988865431 123345567655433222 1 23468999988885
Q ss_pred c
Q 021300 258 V 258 (314)
Q Consensus 258 ~ 258 (314)
.
T Consensus 89 ~ 89 (480)
T PRK01438 89 R 89 (480)
T ss_pred C
Confidence 3
No 346
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.057 Score=47.61 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-----Cc-EE--ecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD-SF--LVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-----a~-~~--v~~~~~~~~~~~-------~~ 246 (314)
++.++||.|+ |.+|...++.+...|++|+++.+++++.+...+++. .+ .+ .|-.+++.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999997 999999999999999999999988766554444331 11 11 233444333222 23
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
.+|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 68999999873
No 347
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.052 Score=46.99 Aligned_cols=75 Identities=20% Similarity=0.314 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc---EEecCCCHHHHHH-------HcCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~---~~v~~~~~~~~~~-------~~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++++++.++++...++.+++ +.. ...|-.+.+.+.. ..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999999889999999999876554444332 221 1234444433222 22469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999884
No 348
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.056 Score=46.80 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CCcE-E--ecCCCHHHHHHH-------cCCcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GADS-F--LVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga~~-~--v~~~~~~~~~~~-------~~~~d 249 (314)
++.++||.|+ |.+|...++.+...|++++++.++.++..+..+++ +... . .|-.+++.+.+. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999987 99999999988888999999999877665554443 3221 1 244444433332 24799
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999884
No 349
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.086 Score=45.77 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCChhhHHHHHHHc---CCcE---EecCCCHHHHHH----Hc-----
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS---FLVSRDQDEMQA----AM----- 245 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v-~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~----~~----- 245 (314)
.+.+++|.|+ |.+|...++.+...|+++++. .++.++.+++.+++ +... ..|-.+++.+.+ ..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999997 999999999988889988775 56665544444333 2221 124445443222 11
Q ss_pred ----CCccEEEEccCC
Q 021300 246 ----GTMDGIIDTVSA 257 (314)
Q Consensus 246 ----~~~d~v~d~~g~ 257 (314)
..+|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999999874
No 350
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.01 E-value=0.16 Score=43.63 Aligned_cols=75 Identities=20% Similarity=0.324 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcEEe---cCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADSFL---VSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~~v---~~~~~~~~~~~-------~~~ 247 (314)
.+.++||.|+ |.+|...+..+...|++|+++.+++.. .....+ ..+.+..+ |-.+++.+.+. ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999997 999999999999899999888776543 222222 22332221 44444433222 136
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 351
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.01 E-value=0.078 Score=46.93 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=71.1
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
..||+..+....++....--.|.+++|+|. ..+|.-...++...|++|++..+.... +
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~---------------------L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN---------------------L 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH---------------------H
Confidence 467777777777777664468999999997 699999999999999998877654322 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.+....+|+++-++|.+..+. -+.+++|..++.+|..
T Consensus 190 ~~~~~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 190 KAELRQADILVSAAGKAGFIT--PDMVKPGATVIDVGIN 226 (279)
T ss_pred HHHHhhCCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence 344456899999998665333 3347999999999975
No 352
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.00 E-value=0.05 Score=49.05 Aligned_cols=86 Identities=20% Similarity=0.288 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~- 260 (314)
-.|.++.|+|.|.+|...+++++.+|.+|+++.+.... .+.... .. .+.++....|+|+.+......
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~---~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YM---EPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cC---CHHHHHhhCCEEEECCCCCchh
Confidence 46899999999999999999999999999999876321 122211 11 233445567888887764321
Q ss_pred ----HHHHHHhhccCCEEEEEcC
Q 021300 261 ----LMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~G~ 279 (314)
-...+..|+++..+|.+|.
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECCC
Confidence 2446777888888887766
No 353
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.00 E-value=0.036 Score=55.73 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=68.3
Q ss_pred cceEEeecCCceEECCCCCCcccccccchhhhhhhhhhHhcCC--CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe
Q 021300 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL--DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214 (314)
Q Consensus 138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~ 214 (314)
...|..+++.-.+.+ +..+.|++=. +.... .-.+.++||.|+ |++|...++.+...|++|+++.
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl------------~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~ 445 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKL------------RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLAD 445 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhh------------ccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEe
Confidence 355666666666666 5555555421 11111 124789999987 9999999999988999999999
Q ss_pred CChhhHHHHHHHc----CCc----EEecCCCHHHHHHH-------cCCccEEEEccCC
Q 021300 215 TSPSKKSEAIERL----GAD----SFLVSRDQDEMQAA-------MGTMDGIIDTVSA 257 (314)
Q Consensus 215 ~~~~~~~~~~~~~----ga~----~~v~~~~~~~~~~~-------~~~~d~v~d~~g~ 257 (314)
++.+..+++.+++ +.. ...|-.+++.+.+. .+++|++|.++|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 9877665554433 321 11244444433332 2479999999984
No 354
>PRK06398 aldose dehydrogenase; Validated
Probab=96.00 E-value=0.077 Score=46.43 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHH-------cCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
.|.++||.|+ +++|...+..+...|++|+++.++..+.. ... ...|-.+++.+.++ .+.+|++|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999997 99999999999999999999888754321 111 11244444333222 246999999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
+.|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 8873
No 355
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.99 E-value=0.04 Score=44.88 Aligned_cols=87 Identities=23% Similarity=0.326 Sum_probs=54.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 265 (314)
+|-++|.|.+|...++-+...|.+++++.+++++.+++.+. |+..+ ....+ +....|+||-++.+.......+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-g~~~~--~s~~e----~~~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-GAEVA--DSPAE----AAEQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-TEEEE--SSHHH----HHHHBSEEEE-SSSHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-hhhhh--hhhhh----HhhcccceEeecccchhhhhhh
Confidence 67889999999999999999999999999999888777544 64332 11122 2233578887777644344433
Q ss_pred H------hhccCCEEEEEcC
Q 021300 266 G------LLKSQGKLVLVGA 279 (314)
Q Consensus 266 ~------~l~~~G~~v~~G~ 279 (314)
. .++++..++.++.
T Consensus 76 ~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS
T ss_pred hhhHHhhccccceEEEecCC
Confidence 3 3344455555544
No 356
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.99 E-value=0.19 Score=42.06 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=60.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHH---HcCCcE--EecCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGADS--FLVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~---~~ga~~--~v~~~~~~~~~~~~~~~d~v~d 253 (314)
.++++++||=+|+|. |..++.+++.. +.+++.++.+++..+.+.+ +++.+. ++..+..+.+......+|.++-
T Consensus 37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~ 115 (196)
T PRK07402 37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI 115 (196)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence 467888888788743 55566666654 5799999999877655533 345432 2222222333333334455443
Q ss_pred ccCC--cccHHHHHHhhccCCEEEEEcCC
Q 021300 254 TVSA--VHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 254 ~~g~--~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
..+. ...+..+.+.|+++|+++.....
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 116 EGGRPIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred ECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence 3222 23477888899999999888653
No 357
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.99 E-value=0.057 Score=47.18 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=50.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE--EecCCCHHHHHHH-------cCCccEEE
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS--FLVSRDQDEMQAA-------MGTMDGII 252 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~--~v~~~~~~~~~~~-------~~~~d~v~ 252 (314)
++||.|+ +++|...++.+...|++|+++.+++++.+++.+++ +... ..|-.+++.+.++ .+.+|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6889987 99999999999889999999999887665554443 2111 1244444333222 24799999
Q ss_pred EccCC
Q 021300 253 DTVSA 257 (314)
Q Consensus 253 d~~g~ 257 (314)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 358
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.074 Score=46.72 Aligned_cols=71 Identities=23% Similarity=0.320 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE-EecCCCHHHHHHH-------cCCccEEEEc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIIDT 254 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~-~v~~~~~~~~~~~-------~~~~d~v~d~ 254 (314)
+.+++|.|+ |.+|...++.+...|++|++++++.++.... .+... ..|-.+++.+.++ .+.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 467899987 9999999999888999999999886543221 13322 2344555433332 2468999999
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
No 359
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.98 E-value=0.18 Score=43.53 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=61.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHH---HHHcCCcE-E--ecCCCHHHHHH-------HcCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADS-F--LVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~---~~~~ga~~-~--v~~~~~~~~~~-------~~~~~ 248 (314)
+.++||.|+ |.+|...++.+...|+++++..+.. ++.... .++.+.+. + .|-.+++.+.. ..+.+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999999998888999987776543 222222 22333321 1 24444432222 12478
Q ss_pred cEEEEccCCcc-------------------------cHHHHHHhhccCCEEEEEcCCCC
Q 021300 249 DGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 249 d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
|.+|.+.|... ..+.+.+.++..|+++.+++..+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 99999998310 12234555667789999987543
No 360
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.98 E-value=0.024 Score=43.74 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=57.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChh-hHHHHHHHcC----C-cEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAIERLG----A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~-~~~~~~~~~g----a-~~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
+|.|+|+ |-+|...++++..+ ..+++.+..++. ....+...++ . +..+...+.+. ...+|+||.|+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence 5889997 99999999999976 446555554443 3333333332 2 22222222222 2789999999998
Q ss_pred cccHHHHHHhhccCCEEEEEcCC
Q 021300 258 VHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
....+..-.+++++-+++.++..
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSST
T ss_pred hHHHHHHHHHhhCCcEEEeCCHH
Confidence 76555555666788889988664
No 361
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.98 E-value=0.064 Score=47.39 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.+++|.|+ |++|...++.+...|++|+++.++.+..+++.+++ +.+. ..|-.+++.+..+ .+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999987 99999999999999999999999877665554443 3321 1233444332221 2479
Q ss_pred cEEEEccC
Q 021300 249 DGIIDTVS 256 (314)
Q Consensus 249 d~v~d~~g 256 (314)
|++|.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
No 362
>PRK08643 acetoin reductase; Validated
Probab=95.97 E-value=0.049 Score=47.43 Aligned_cols=74 Identities=20% Similarity=0.355 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHH-------HcCCcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMD 249 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~-------~~~~~d 249 (314)
+.++||.|+ |.+|...++.+...|++|+++.++.++.+++.+++ +.+.. .|-.+++.+.+ ..+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468899987 99999999999999999999999877665554443 22221 24444433222 224799
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 363
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.97 E-value=0.058 Score=49.07 Aligned_cols=95 Identities=17% Similarity=0.238 Sum_probs=63.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCC----CeEEEEeCC--hhhHHHHHHHcCC--------------------c--EEecCCC
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTS--PSKKSEAIERLGA--------------------D--SFLVSRD 237 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g----~~vi~v~~~--~~~~~~~~~~~ga--------------------~--~~v~~~~ 237 (314)
+|.|.|.|.+|..+.+.+...+ ..++.+... .+....+. +++. + .+...++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll-~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLL-RYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHH-hhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4778999999999999887653 566665542 22222332 2221 1 1122233
Q ss_pred HHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 238 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
++.+.+...++|+||+|+|.......+...++.|++.|+++.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 44444444589999999998877888899999999999998874
No 364
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.96 E-value=0.12 Score=47.85 Aligned_cols=92 Identities=13% Similarity=0.325 Sum_probs=66.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHC--CCeEEEEe--CChhhHHHHHHHcCCcEEecCCCH--HHHH---------------
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ--------------- 242 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~--g~~vi~v~--~~~~~~~~~~~~~ga~~~v~~~~~--~~~~--------------- 242 (314)
.+|.|+|+ |++|..++...+.. ..+++.++ ++.++..+.+++|+.+.++..++. ..++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 46899997 99999999998876 45777765 566678888899998766554432 1111
Q ss_pred ---HHc--CCccEEEEccCCcccHHHHHHhhccCCEEEE
Q 021300 243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL 276 (314)
Q Consensus 243 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 276 (314)
++. ..+|+|+.++++...+...+.+++.|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 111 1489999999877678888888877766555
No 365
>PRK14967 putative methyltransferase; Provisional
Probab=95.95 E-value=0.16 Score=43.63 Aligned_cols=95 Identities=27% Similarity=0.253 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHH---HcCCcEEecCCCHHHHHHH-cCCccEEEEcc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAA-MGTMDGIIDTV 255 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~---~~ga~~~v~~~~~~~~~~~-~~~~d~v~d~~ 255 (314)
++++++||-+|+|. |..+..+++. ++ +++.++.++.....+.+ ..+.+..+...+. .... .+.||+|+.+.
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~--~~~~~~~~fD~Vi~np 109 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDW--ARAVEFRPFDVVVSNP 109 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECch--hhhccCCCeeEEEECC
Confidence 67889999999987 8888888875 55 89999998876543322 2343322222222 1112 34799999763
Q ss_pred CCc---------------------------ccHHHHHHhhccCCEEEEEcC
Q 021300 256 SAV---------------------------HPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 256 g~~---------------------------~~~~~~~~~l~~~G~~v~~G~ 279 (314)
+-. ..+..+.+.|+++|+++++-.
T Consensus 110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~ 160 (223)
T PRK14967 110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS 160 (223)
T ss_pred CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 211 123457789999999998744
No 366
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.94 E-value=0.066 Score=48.71 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=64.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHHcCCccEEEEcc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~ga---~~-~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
.|.++||.|+ |.+|...++.+...| .+|++++++..+...+.+.+.. .. ..|-.+++.+.+...++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 3678999987 999999888877765 5888887776554444444432 11 125566666666667899999988
Q ss_pred CCcc-----------------cHHHHHHhhccC--CEEEEEcCC
Q 021300 256 SAVH-----------------PLMPLIGLLKSQ--GKLVLVGAP 280 (314)
Q Consensus 256 g~~~-----------------~~~~~~~~l~~~--G~~v~~G~~ 280 (314)
|... ....+++.+.+. ++++.++..
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~ 126 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTD 126 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 7421 122344445443 588888764
No 367
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.94 E-value=0.051 Score=46.94 Aligned_cols=75 Identities=23% Similarity=0.324 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |.+|...+..+...|++|++++++.++...+.+. .+.+. ..|-.+++.+.+. .+.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999997 9999999998888899999999986654444332 23221 1244444433332 2368
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|.+|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
No 368
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.069 Score=45.94 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHH-------HcC-C
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQA-------AMG-T 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~-------~~~-~ 247 (314)
.|.+++|.|+ +++|.+.+..+...|++|+++.++.++.+++.++ .+.+.. .|..+++.+.+ ..+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999999998999999999988776665443 343321 24444433322 224 6
Q ss_pred ccEEEEccC
Q 021300 248 MDGIIDTVS 256 (314)
Q Consensus 248 ~d~v~d~~g 256 (314)
+|++|.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 369
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.91 E-value=0.058 Score=49.56 Aligned_cols=86 Identities=14% Similarity=0.045 Sum_probs=57.2
Q ss_pred hhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH----HHHHcCC------cEE-ecCCC
Q 021300 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AIERLGA------DSF-LVSRD 237 (314)
Q Consensus 170 ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~----~~~~~ga------~~~-v~~~~ 237 (314)
|||.-++... ...+.+|||.|+ |-+|...+..+...|.+|+++++....... +.+..+. ..+ .|-.+
T Consensus 2 ~~~~~~~~~~-~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKL-VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhcc-cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 5666665544 466689999997 999999999999999999999875432211 1111111 111 13344
Q ss_pred HHHHHHHcCCccEEEEccC
Q 021300 238 QDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 238 ~~~~~~~~~~~d~v~d~~g 256 (314)
.+.+.++..++|+||.+++
T Consensus 81 ~~~l~~~~~~~d~ViHlAa 99 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAA 99 (348)
T ss_pred HHHHHHHhhCCCEEEECcc
Confidence 5555666668999999886
No 370
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.073 Score=46.21 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.+++|.|+ |.+|...++.+...|++|+++.+++++..++.+. .+.+. ..|-.+.+.+..+ .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999997 9999999998888999999999987765444333 33321 1233444332222 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 371
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.077 Score=46.04 Aligned_cols=75 Identities=19% Similarity=0.293 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHH----HH---cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQ----AA---MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~----~~---~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++|+++.++.++.+.+.+++ +... -.|..+.+.+. +. .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999987 99999999999999999999999877665555443 3221 12444443322 22 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 372
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.16 Score=44.04 Aligned_cols=70 Identities=24% Similarity=0.284 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-EecCCCHHHHHHH-------cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~v~~~~~~~~~~~-------~~~~d~v 251 (314)
.+.++||.|+ |++|...++.+...|++++++.++.++ +..+. .. ..|-.+++.+.+. .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999987 999999999999899999999888654 11222 21 2344444333322 2468999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999873
No 373
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=95.87 E-value=0.11 Score=44.18 Aligned_cols=120 Identities=19% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC----C-cEEecCCCH-------HHHHHH---cCC
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----A-DSFLVSRDQ-------DEMQAA---MGT 247 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g----a-~~~v~~~~~-------~~~~~~---~~~ 247 (314)
|.++++.|+ |++|+.....+...|+.+.++..+.+..+..+ +|. . ..++..-|. +..++. .+.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 788988875 99999998888889999988888877654443 333 2 223322221 222222 346
Q ss_pred ccEEEEccCCc-----------------ccHHHHHHhhc-----cCCEEEEEcCCCCCcccchhhhhcCcee-Eeeeccc
Q 021300 248 MDGIIDTVSAV-----------------HPLMPLIGLLK-----SQGKLVLVGAPEKPLELPAFSLLMGEEE-DSWWQHD 304 (314)
Q Consensus 248 ~d~v~d~~g~~-----------------~~~~~~~~~l~-----~~G~~v~~G~~~~~~~~~~~~~~~~~~~-i~~~~~~ 304 (314)
.|++++..|-. .+...+++.+. ++|.+|-+++-.+-.+.|...++.-.++ +..+.++
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRS 163 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRS 163 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehh
Confidence 89999987721 23445556553 5789999998777777777777777776 4443444
No 374
>PRK06720 hypothetical protein; Provisional
Probab=95.86 E-value=0.1 Score=42.85 Aligned_cols=75 Identities=20% Similarity=0.275 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHH-------HcCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~-------~~~~~ 248 (314)
.|.+++|.|+ +++|...+..+...|++++++.++.+..++..+++ +.+. -.|..+.+.+.+ ..+.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678899987 88999999988888999999998876554443333 4332 123334332222 22469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999999884
No 375
>PLN02214 cinnamoyl-CoA reductase
Probab=95.86 E-value=0.12 Score=47.28 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=63.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHH-HHHHHcC---Cc-EE--ecCCCHHHHHHHcCCccEEEE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAIERLG---AD-SF--LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~-~~~~~~g---a~-~~--v~~~~~~~~~~~~~~~d~v~d 253 (314)
..+.+|||.|+ |.+|...+..+...|.+|++++++.+... ...+.+. .. .+ .|-.+++.+.+...++|+||.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 45678999998 99999999999989999999988765321 1112221 11 11 234455666666678999999
Q ss_pred ccCCcc------------cHHHHHHhhccCC--EEEEEcC
Q 021300 254 TVSAVH------------PLMPLIGLLKSQG--KLVLVGA 279 (314)
Q Consensus 254 ~~g~~~------------~~~~~~~~l~~~G--~~v~~G~ 279 (314)
+++... ....+++.+++.| +++.+++
T Consensus 88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 987321 1233455554443 7887765
No 376
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.86 E-value=0.08 Score=46.18 Aligned_cols=75 Identities=23% Similarity=0.330 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ |.+|...++.+...|++|++++++.++.+.+.+.+ +... ..|-.+++.+.+. .+.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999997 99999999999889999999999877655554332 3221 2244554443221 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|.+|.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 377
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.85 E-value=0.094 Score=47.76 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 259 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~-~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~- 259 (314)
-.|.++.|+|.|.+|...++.++ .+|.+|+...+.... +....++... . .+.++....|+|.-+..-..
T Consensus 143 L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~--~~~~~~~~~~----~---~l~ell~~sDvv~lh~plt~~ 213 (323)
T PRK15409 143 VHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK--EAEERFNARY----C---DLDTLLQESDFVCIILPLTDE 213 (323)
T ss_pred CCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch--hhHHhcCcEe----c---CHHHHHHhCCEEEEeCCCChH
Confidence 36799999999999999999998 899999887765321 2223444421 1 23345556788777665221
Q ss_pred ----cHHHHHHhhccCCEEEEEcC
Q 021300 260 ----PLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 260 ----~~~~~~~~l~~~G~~v~~G~ 279 (314)
.-...+..|+++..+|.++.
T Consensus 214 T~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 214 THHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred HhhccCHHHHhcCCCCeEEEECCC
Confidence 12347778888888888876
No 378
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.065 Score=46.66 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC---cE-EecCCCHHHHHHH-------cCCccEE
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga---~~-~v~~~~~~~~~~~-------~~~~d~v 251 (314)
+.++||.|+ |.+|...+..+...|++++++.+++++.+++.+++.. .. -.|-.+.+.+... .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457999998 9999999998888899999999988877666665432 11 2344555443322 1368999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 379
>PRK08317 hypothetical protein; Provisional
Probab=95.85 E-value=0.064 Score=45.97 Aligned_cols=100 Identities=26% Similarity=0.345 Sum_probs=63.2
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHc---CCcEEecCCCHHHHHHHcCCccEEEE
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~---ga~~~v~~~~~~~~~~~~~~~d~v~d 253 (314)
..+.++++||-+|+|. |..+..+++..+ .+++.++.++.....+.+.. +...-+...+........+.||+|+-
T Consensus 15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 93 (241)
T PRK08317 15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRS 93 (241)
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEE
Confidence 3478899999999976 888888888763 58999998887665553331 11111111111111112346888775
Q ss_pred ccC-----C-cccHHHHHHhhccCCEEEEEcC
Q 021300 254 TVS-----A-VHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 254 ~~g-----~-~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
... + ...+..+.++|+++|.++....
T Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 94 DRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred echhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 321 1 2357788999999999988753
No 380
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.84 E-value=0.069 Score=49.58 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=50.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHHHHcCCccEEEEccC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
..+.+|||.|+ |.+|...+..+...|.+|+++++........ ..++...+ .|-.+.+.+.+...++|+||++++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 46689999998 9999999999999999999988754321111 01122211 244445555555568999999985
No 381
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.84 E-value=0.087 Score=45.53 Aligned_cols=75 Identities=20% Similarity=0.283 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHcCCcEE---ecCCCHHHHH----HH---cCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSF---LVSRDQDEMQ----AA---MGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~ga~~~---v~~~~~~~~~----~~---~~~~d~ 250 (314)
.|.++||.|+ |.+|...+..+...|++|+++.++.. +..+..++.+.+.. .|-.+++.+. +. .+.+|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4788999997 99999999999999999999888653 22233344443221 2334443322 22 246999
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999874
No 382
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.84 E-value=0.075 Score=47.20 Aligned_cols=96 Identities=16% Similarity=0.239 Sum_probs=71.8
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++....--.|.++.|+|. +.+|.-.+.++...|++|++.-.... .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 457777777777776664468999999997 99999999999999999987622111 12
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+|+-++|....+... .+++|-.++.+|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 33455689999999988755554 489999999998753
No 383
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.083 Score=46.61 Aligned_cols=73 Identities=19% Similarity=0.254 Sum_probs=52.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEEEE
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
.++||.|+ |.+|...++.+...|.+|+++.+++++.+++.+..+... ..|-.+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899987 999999999888899999999999877766655544321 1344444333221 246899999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 384
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.83 E-value=0.2 Score=38.12 Aligned_cols=90 Identities=22% Similarity=0.317 Sum_probs=60.4
Q ss_pred EEEEEcCChHHHHHHHHHHHC--CCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAM--GVKVT-VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~--g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 262 (314)
++.|+|.|..|......++.. +.+++ ++++++++.+.+.++++... + .+.+.+.+ ...+|+|+-++.......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~-~--~~~~~ll~-~~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPV-Y--TDLEELLA-DEDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEE-E--SSHHHHHH-HTTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccc-h--hHHHHHHH-hhcCCEEEEecCCcchHH
Confidence 578999999998888666655 44666 44566667777788889873 2 33222211 137999999998876566
Q ss_pred HHHHhhccCCEEEEEcCC
Q 021300 263 PLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 263 ~~~~~l~~~G~~v~~G~~ 280 (314)
.+..+++.|- -+++-.|
T Consensus 78 ~~~~~l~~g~-~v~~EKP 94 (120)
T PF01408_consen 78 IAKKALEAGK-HVLVEKP 94 (120)
T ss_dssp HHHHHHHTTS-EEEEESS
T ss_pred HHHHHHHcCC-EEEEEcC
Confidence 6777776555 5666443
No 385
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.82 E-value=0.06 Score=43.49 Aligned_cols=90 Identities=21% Similarity=0.222 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.+.+|.|+|-|.-|.+.++-+|..|.+|++..+...+..+.+++-|.+.. .+.+...+.|+|+-.+.+..
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~q~~ 75 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-------SVAEAVKKADVVMLLLPDEVQPE 75 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-------EHHHHHHC-SEEEE-S-HHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-------cHHHHHhhCCEEEEeCChHHHHH
Confidence 47899999999999999999999999999999988766677788887532 23344556999998887653
Q ss_pred cH-HHHHHhhccCCEEEEEcC
Q 021300 260 PL-MPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 260 ~~-~~~~~~l~~~G~~v~~G~ 279 (314)
.. ......|+++-.+++...
T Consensus 76 vy~~~I~p~l~~G~~L~fahG 96 (165)
T PF07991_consen 76 VYEEEIAPNLKPGATLVFAHG 96 (165)
T ss_dssp HHHHHHHHHS-TT-EEEESSS
T ss_pred HHHHHHHhhCCCCCEEEeCCc
Confidence 12 334456777777666544
No 386
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.057 Score=47.18 Aligned_cols=77 Identities=17% Similarity=0.215 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCChhh-HHHHHHHc---CC-c-EE--ecCCCHHH----HHHHc-
Q 021300 181 DKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAIERL---GA-D-SF--LVSRDQDE----MQAAM- 245 (314)
Q Consensus 181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~-g~~vi~v~~~~~~-~~~~~~~~---ga-~-~~--v~~~~~~~----~~~~~- 245 (314)
+..+.++||.|+ |++|...++.+... |++|+++.+++++ .+++.+++ +. + .+ .|-.+++. +.++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 467789999998 99999999877766 4899999998765 44444433 32 2 11 23334332 23322
Q ss_pred -CCccEEEEccCC
Q 021300 246 -GTMDGIIDTVSA 257 (314)
Q Consensus 246 -~~~d~v~d~~g~ 257 (314)
+.+|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 479999988764
No 387
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.80 E-value=0.083 Score=46.32 Aligned_cols=75 Identities=17% Similarity=0.282 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ +++|...+..+...|++++++.+++++.+++.+.+ +.+.. .|-.+.+.+... .+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999987 99999999888889999999988877665554433 43321 244444332222 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|.++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999874
No 388
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.80 E-value=0.13 Score=43.94 Aligned_cols=37 Identities=32% Similarity=0.393 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~ 218 (314)
-.|.+++|.|.|.+|..+++++...|++++.+.+...
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4689999999999999999999999998888877766
No 389
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.80 E-value=0.093 Score=45.18 Aligned_cols=74 Identities=16% Similarity=0.300 Sum_probs=58.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH-HcCCcEE-ecCCCHHHHHHH-cCCccEEEEccCCcc
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE-RLGADSF-LVSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~-~~ga~~~-v~~~~~~~~~~~-~~~~d~v~d~~g~~~ 259 (314)
+++|+|+|.+|...++.+...|..|+++++++++.++... ++....+ .+..+++.++++ ...+|+++-++|+..
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5789999999999999999999999999999998877433 4555443 344556776666 458999999999854
No 390
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.79 E-value=0.052 Score=49.36 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=38.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER 226 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~ 226 (314)
+.|.+++|.|+ +++|.+.++.+...|++|+++.+++++.+++.++
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 35889999998 9999999988888899999999998877666544
No 391
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.062 Score=45.88 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=49.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC-Cc-EEecCCCHHHHHHH----c-CCccEEEEccC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA----M-GTMDGIIDTVS 256 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g-a~-~~v~~~~~~~~~~~----~-~~~d~v~d~~g 256 (314)
.+++|.|+ |.+|...+..+...|++|+++++++++..++ ++++ .. ...|-.+++.+.++ . +++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46889987 9999999988888999999999987766554 3333 22 12344454433332 2 26999999886
Q ss_pred C
Q 021300 257 A 257 (314)
Q Consensus 257 ~ 257 (314)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 392
>PLN03075 nicotianamine synthase; Provisional
Probab=95.77 E-value=0.084 Score=47.18 Aligned_cols=104 Identities=17% Similarity=0.135 Sum_probs=66.4
Q ss_pred hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCChhhHHHHHHHcCC----cE--EecCCCHHHHHHHc
Q 021300 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGA----DS--FLVSRDQDEMQAAM 245 (314)
Q Consensus 174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~--g~~vi~v~~~~~~~~~~~~~~ga----~~--~v~~~~~~~~~~~~ 245 (314)
.+..... .++++|+-+|+|+.++.++.+++.+ +.+++.++.+++..+.+.+.+.. .. -+...+........
T Consensus 115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l 193 (296)
T PLN03075 115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL 193 (296)
T ss_pred HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence 3433332 4778999999999999888888754 45788999998877555444422 11 11112211111113
Q ss_pred CCccEEEEccC-------CcccHHHHHHhhccCCEEEEEc
Q 021300 246 GTMDGIIDTVS-------AVHPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 246 ~~~d~v~d~~g-------~~~~~~~~~~~l~~~G~~v~~G 278 (314)
++||+||-.+= -...+..+.+.|++||.++.=.
T Consensus 194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 57999988741 1234678888999999988765
No 393
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.76 E-value=0.1 Score=46.34 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=71.4
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
..||+..+....++....--.|.+++|+|. ..+|.-.+.++...|++|++.-..... +
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~---------------------l 201 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD---------------------L 201 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------H
Confidence 467777777777777664468999999997 669999999999999998776543222 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
.+....+|+++.++|.+..+ --+.++++-.++.+|..
T Consensus 202 ~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 KKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 33445688999999987643 34588999999999974
No 394
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.76 E-value=0.11 Score=50.04 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
-.+.+|+|+|.|..|++++.+++..|+.|++.++......++.+++|.......+.++.+ ..+|+|+-+.|-
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi 84 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGW 84 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCC
Confidence 456789999999999999999999999998888765554444556676554332333332 367888887764
No 395
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.76 E-value=0.22 Score=43.12 Aligned_cols=69 Identities=19% Similarity=0.203 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcE---EecCCCHHHHHHH-------cCCccEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~---~v~~~~~~~~~~~-------~~~~d~v 251 (314)
++.++||.|+ |.+|...+..+...|++++++.++. + +..+... -.|-.+++.+.+. .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999999988999999998875 1 1223221 1233444333332 2468999
Q ss_pred EEccCC
Q 021300 252 IDTVSA 257 (314)
Q Consensus 252 ~d~~g~ 257 (314)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999874
No 396
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.76 E-value=0.18 Score=43.27 Aligned_cols=73 Identities=16% Similarity=0.198 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHHc---CCcE---EecCCCHHHHH-------HHcCCcc
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADS---FLVSRDQDEMQ-------AAMGTMD 249 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~~---ga~~---~v~~~~~~~~~-------~~~~~~d 249 (314)
.++||.|+ |.+|...++.+...|++++++.+ ++++.++..++. +... ..|..+++.+. +..+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 36889987 99999999999999999988887 444443333322 2211 12444443322 2234699
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
.+|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999874
No 397
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.12 Score=44.11 Aligned_cols=68 Identities=21% Similarity=0.200 Sum_probs=47.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHH----Hc--CCccEEEEcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQA----AM--GTMDGIIDTV 255 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~----~~--~~~d~v~d~~ 255 (314)
+.++||.|+ |.+|...++.+...|.+|+++.++.+.. +..+ ...|-.+++.+.. +. .++|++|.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 568999998 9999999999999999999998876531 1222 1234444433322 21 2689999998
Q ss_pred CC
Q 021300 256 SA 257 (314)
Q Consensus 256 g~ 257 (314)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 74
No 398
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.73 E-value=0.21 Score=43.66 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=49.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHH---HcCCcE---EecCCCHHHHHHH-------cC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~ 246 (314)
-.+.++||.|+ |.+|...++.+...|++++++.++.. ....+.+ ..+... ..|-.+.+.+.++ .+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999987 99999999999999999888777533 2222222 234321 2244444433222 24
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
.+|+++.+.|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 399
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.099 Score=45.38 Aligned_cols=74 Identities=23% Similarity=0.370 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-c---EEecCCCHHHHHHH-------cCCccE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D---SFLVSRDQDEMQAA-------MGTMDG 250 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~---~~v~~~~~~~~~~~-------~~~~d~ 250 (314)
.+.++||.|+ |.+|...++.+...|++|+++.++.+.. +..+++.. . ...|-.+++.+.+. .+.+|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999997 9999999999988999999998876543 33333322 1 11344444333222 246899
Q ss_pred EEEccCC
Q 021300 251 IIDTVSA 257 (314)
Q Consensus 251 v~d~~g~ 257 (314)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999874
No 400
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.71 E-value=0.1 Score=45.11 Aligned_cols=100 Identities=25% Similarity=0.305 Sum_probs=71.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC---c-EEecCCCHHHHHHHcCCccEEEEcc
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---D-SFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga---~-~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
.++|++||=+++|. |-.|..+++..| ++|++++-++..+....++..- . .-+...+...+.--.+.||+|.-+.
T Consensus 49 ~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~f 127 (238)
T COG2226 49 IKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISF 127 (238)
T ss_pred CCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeee
Confidence 46899999887764 889999999886 5999999999887666655542 1 1123344444433345799988776
Q ss_pred CC------cccHHHHHHhhccCCEEEEEcCCC
Q 021300 256 SA------VHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 256 g~------~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
|- ...+..+.+.|+|+|+++.+-...
T Consensus 128 glrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 128 GLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred hhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 62 235888999999999999886654
No 401
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.70 E-value=0.071 Score=45.48 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=28.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~ 216 (314)
...+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999998 57676665
No 402
>PRK00811 spermidine synthase; Provisional
Probab=95.70 E-value=0.16 Score=45.42 Aligned_cols=96 Identities=19% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcC-----C--c---EEecCCCHHHHHHHcCCccE
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-----A--D---SFLVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~g-----a--~---~~v~~~~~~~~~~~~~~~d~ 250 (314)
...++||++|+|. |..+..+++..+. ++++++.+++-.+.+.+.+. . + .++..+....+....+.||+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 4567899998865 6667777776554 78888888776544433332 1 1 12222223444443457999
Q ss_pred EEEccCCc----------ccHHHHHHhhccCCEEEEEc
Q 021300 251 IIDTVSAV----------HPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 251 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~G 278 (314)
|+-....+ ..+..+.+.|+++|.++.-.
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 88654221 12467889999999998753
No 403
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.69 E-value=0.13 Score=42.72 Aligned_cols=97 Identities=20% Similarity=0.185 Sum_probs=58.7
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHC-C-CeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHH---HHHHH--cCCcc
Q 021300 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-G-VKVTVISTSPSKKSEAIERLGADSF-LVSRDQD---EMQAA--MGTMD 249 (314)
Q Consensus 178 ~~~~~~g~~vlI~Gag~vG~~a~~~a~~~-g-~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~---~~~~~--~~~~d 249 (314)
...+++|++||.+|+|+-+.. ..+++.. + .+++.++.++.. +..+.+.+ .+..+.+ .+.+. .+++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~-~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWS-QVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHH-HHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 445789999999998775543 4444433 3 478888888753 11234322 1333322 22222 23699
Q ss_pred EEEEcc-----CC------------cccHHHHHHhhccCCEEEEEcCC
Q 021300 250 GIIDTV-----SA------------VHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 250 ~v~d~~-----g~------------~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
+|+... |. ...+..+.++|+++|+++.....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence 999532 21 23467789999999999986543
No 404
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.69 E-value=0.095 Score=48.16 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=54.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc--CC--cEE-ecCCCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GA--DSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~--ga--~~~-v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
..+.+|||.|+ |.+|...++.+...|.+|+++.++......+.+.+ +. ..+ .|-.+.+.+.++..++|.||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 56789999997 99999999999989999999888776554444333 11 111 23344556666666799999988
Q ss_pred CC
Q 021300 256 SA 257 (314)
Q Consensus 256 g~ 257 (314)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 63
No 405
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.69 E-value=0.041 Score=55.12 Aligned_cols=77 Identities=22% Similarity=0.364 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh--------------------hHHHHHHHcCCcEEecCCC-HH-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD-QD- 239 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~--------------------~~~~~~~~~ga~~~v~~~~-~~- 239 (314)
..|.+|+|+|+|+.|+.++..++..|.+|+++.+.+. +..+..+++|.+...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 3688999999999999999999999999999986532 1234456778654433211 11
Q ss_pred HHHHHcCCccEEEEccCCc
Q 021300 240 EMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 240 ~~~~~~~~~d~v~d~~g~~ 258 (314)
.+..+...||.||.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1223335799999998853
No 406
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.68 E-value=0.089 Score=46.40 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHHcC------CcEE-ecCCCHHHHHHHcCCccE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLG------ADSF-LVSRDQDEMQAAMGTMDG 250 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~~g------a~~~-v~~~~~~~~~~~~~~~d~ 250 (314)
.++++++||-+|+|. |..+..+++..+ .+++.++.+++..+.+.++.. .+.+ +...+...+....+.||.
T Consensus 70 ~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~sfD~ 148 (261)
T PLN02233 70 GAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDCYFDA 148 (261)
T ss_pred CCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCCCEeE
Confidence 368899999999865 556777777654 589999999987766644322 1111 111111111111236999
Q ss_pred EEEccCC------cccHHHHHHhhccCCEEEEEcCC
Q 021300 251 IIDTVSA------VHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 251 v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
|+-..+- ...+..+.+.|+|||+++.+-..
T Consensus 149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 8764331 12478899999999999887543
No 407
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.68 E-value=0.073 Score=48.52 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-------CCc---EEecCCCHHHHHHHcCCccEEEEc
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-------ga~---~~v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
.+|.|+|+|.+|.+.+..+...|.+|.++.+++++.+.+.+.. |.. .+....+ ..+....+|+|+-+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence 4689999999999999999888999999999887766664321 210 0111122 22334679999999
Q ss_pred cCCcccHHHHHHhhccCCEEEEEcC
Q 021300 255 VSAVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
+.... +...++.++++-.++.+..
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEee
Confidence 98885 6788888888777776633
No 408
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.68 E-value=0.013 Score=52.44 Aligned_cols=134 Identities=30% Similarity=0.367 Sum_probs=73.0
Q ss_pred cceEEeecCCceEECCCCCCcccccccchhhhhhh--hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEe
Q 021300 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY--SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIS 214 (314)
Q Consensus 138 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~ 214 (314)
|.+|-.-+...++.+++++.|.... ...|.. ..+... .++|++||=+|+|+ |.+++..++ +|+ +|+.++
T Consensus 120 w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D 191 (295)
T PF06325_consen 120 WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID 191 (295)
T ss_dssp T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence 4444223446677888777765543 323322 223333 48899999888643 555555555 477 788888
Q ss_pred CChhhHHHHHH---HcCC-cEEecCCCHHHHHHHcCCccEEEEccCCcc---cHHHHHHhhccCCEEEEEcCCCC
Q 021300 215 TSPSKKSEAIE---RLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 215 ~~~~~~~~~~~---~~ga-~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
.++...+.+.+ .-+. +.+......+. ..+.||+|+-++-... .+....+.|+++|.+++.|....
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~~~~---~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLSEDL---VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCTSCT---CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEeccc---ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 88765433322 2232 22211111111 1267999998776442 13345567889999999998754
No 409
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.67 E-value=0.062 Score=49.25 Aligned_cols=76 Identities=25% Similarity=0.416 Sum_probs=49.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------hhHH---HHHHHcCCcE-E---ec
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS---EAIERLGADS-F---LV 234 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~---------------------~~~~---~~~~~~ga~~-~---v~ 234 (314)
..+|+|+|+|++|..+++.+...|. ++++++.+. .+.+ +.++++..+. + ..
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~ 103 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ 103 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 3679999999999999999999998 777777652 1111 1123333211 1 11
Q ss_pred CCCHHHHHHHcCCccEEEEccCCcc
Q 021300 235 SRDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 235 ~~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
.-.++.+.++..++|+|+|++.+..
T Consensus 104 ~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 104 DVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred cCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123445566678999999998775
No 410
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.67 E-value=0.12 Score=45.82 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=71.8
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+.+..++....--.|.+++|+|. ..+|.=...++...|++|++.-+.... +
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777776664468999999996 999999999999999988776543222 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+..+ --+.+++|-.++.+|-..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFI--DEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHhhCCEEEEcCCCcCcc--CHHHcCCCcEEEEeeccc
Confidence 33445589999999988633 345689999999998754
No 411
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.67 E-value=0.087 Score=43.44 Aligned_cols=92 Identities=18% Similarity=0.312 Sum_probs=53.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh------------------hhHHHH---HHHcC-CcEEec---CCCHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEA---IERLG-ADSFLV---SRDQD 239 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~------------------~~~~~~---~~~~g-a~~~v~---~~~~~ 239 (314)
+|+|+|+|++|...++.+...|. ++++++.+. .+.+.+ ++++. ...+.. .-+.+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 48899999999999999988898 577777653 111111 12222 112111 11123
Q ss_pred HHHHHcCCccEEEEccCCcccHHHHHHhhccC-CEEEEE
Q 021300 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLV 277 (314)
Q Consensus 240 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~ 277 (314)
...+...++|+||+|+.+...-....+.+.+. ++-...
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~ 119 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVC 119 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 33445568999999988765333344544443 543333
No 412
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.63 E-value=0.061 Score=48.74 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC--c-EE--ecCCCHHHHHHHcCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--D-SF--LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga--~-~~--v~~~~~~~~~~~~~~~d~v~d 253 (314)
.|.++||.|+ |.+|...+..+...|++|+++.++........+. .+. . .+ .|-.+.+.+.+...++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4688999997 9999999999998999998887776543322111 121 1 11 244555566666668999999
Q ss_pred ccCC
Q 021300 254 TVSA 257 (314)
Q Consensus 254 ~~g~ 257 (314)
+++.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9873
No 413
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.62 E-value=0.12 Score=45.03 Aligned_cols=75 Identities=17% Similarity=0.249 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHH---HHHcCCcE---EecCCCHHHHHHH-------cCC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS---FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~---~~~~ga~~---~v~~~~~~~~~~~-------~~~ 247 (314)
..|.++||.|+ +.+|...++.+...|++++++.++ ++.+++ .++.+.+. ..|-.+.+.+... .+.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 999999999999999999998887 333333 23334322 1244444433222 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 414
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.61 E-value=0.16 Score=39.83 Aligned_cols=94 Identities=21% Similarity=0.277 Sum_probs=55.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------hh----HHHHHHHcCCcEEec---CC
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SK----KSEAIERLGADSFLV---SR 236 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~-------------------~~----~~~~~~~~ga~~~v~---~~ 236 (314)
..+|+|+|+|++|..++..+...|. ++++++... .+ .+++.+..+...+.. .-
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 3689999999999999999988898 676776431 01 122222222222211 11
Q ss_pred CHHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEE
Q 021300 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 237 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (314)
+.+...+..+++|+||+|+.+...-..+.+..+..++-+..
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~ 122 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFID 122 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence 23444455568999999999876444555555555553333
No 415
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.079 Score=45.65 Aligned_cols=75 Identities=13% Similarity=0.229 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.+++|.|+ |.+|..++..+...|.+|+++.+++++..++.+.+ +... ..|-.+++.+... .+..
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999987 99999999999989999999999887665554432 2221 1233444332222 2469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999884
No 416
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.60 E-value=0.086 Score=49.11 Aligned_cols=77 Identities=23% Similarity=0.346 Sum_probs=49.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hhhHHHHHHHc----CCcEEecC---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAIERL----GADSFLVS--- 235 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~-------------------~~~~~~~~~~~----ga~~~v~~--- 235 (314)
...+|+|+|+|++|..++..+...|. ++++++.+ ..+.+.+.+++ +...+...
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 45789999999999999999999998 67777665 12222222222 22122111
Q ss_pred CCHHHHHHHcCCccEEEEccCCcc
Q 021300 236 RDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 236 ~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
-+.+.+.++..++|+|++|+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 122344455568999999999865
No 417
>PRK08017 oxidoreductase; Provisional
Probab=95.59 E-value=0.11 Score=45.09 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE-ecCCCHHHHH----HH---c-CCccEEEEc
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---M-GTMDGIIDT 254 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~-v~~~~~~~~~----~~---~-~~~d~v~d~ 254 (314)
+++||.|+ |.+|...++.+...|++++++.++.++.+.+ ++.+++.+ .|..+.+.+. .. . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999998 9999999999999999999999988776555 45565443 2444443222 21 1 458889988
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 418
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.081 Score=46.10 Aligned_cols=76 Identities=18% Similarity=0.279 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCChhhHHHHHH---HcCCcE---EecCCCHHHHHHH-------cC
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~-vi~v~~~~~~~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~ 246 (314)
..+.+++|.|+ |.+|...++.+...|++ |+++.++.++...+.+ +.+... .+|-.+++.+.++ .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35678999997 99999999999999998 8888887665543332 334332 2344555433322 24
Q ss_pred CccEEEEccCC
Q 021300 247 TMDGIIDTVSA 257 (314)
Q Consensus 247 ~~d~v~d~~g~ 257 (314)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999974
No 419
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.58 E-value=0.063 Score=43.41 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=59.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC----------cEEecCCCHHHHHHHcCCccEEEEcc
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----------DSFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga----------~~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
+|.|+|+|..|.+++..+...|.+|.+..++++..+.+.+.-.. +.+..+. .+.+..++.|+++-++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~---dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATT---DLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEES---SHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccccc---CHHHHhCcccEEEecc
Confidence 58899999999999999999999999999999877766543221 1111122 2334557899999999
Q ss_pred CCcccHHHHHHhhcc---CCEEEEE
Q 021300 256 SAVHPLMPLIGLLKS---QGKLVLV 277 (314)
Q Consensus 256 g~~~~~~~~~~~l~~---~G~~v~~ 277 (314)
.+.. ....++.+++ .+..+..
T Consensus 78 Ps~~-~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 78 PSQA-HREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GGG-HHHHHHHHTTTSHTT-EEEE
T ss_pred cHHH-HHHHHHHHhhccCCCCEEEE
Confidence 8775 6667776665 4554444
No 420
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=95.58 E-value=0.11 Score=47.25 Aligned_cols=88 Identities=23% Similarity=0.203 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-.+.+|.|+|.|.+|.+.++-++..|.+|++..+...+..+.+++.|.... + ..+.....|+|+-++.... .
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~----s---~~eaa~~ADVVvLaVPd~~-~ 86 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL----T---VAEAAKWADVIMILLPDEV-Q 86 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC----C---HHHHHhcCCEEEEcCCHHH-H
Confidence 457889999999999999999999999998877776655566666676421 2 2345567899999998654 2
Q ss_pred HHH-----HHhhccCCEEEEE
Q 021300 262 MPL-----IGLLKSQGKLVLV 277 (314)
Q Consensus 262 ~~~-----~~~l~~~G~~v~~ 277 (314)
... ...++++..+++.
T Consensus 87 ~~V~~~~I~~~Lk~g~iL~~a 107 (330)
T PRK05479 87 AEVYEEEIEPNLKEGAALAFA 107 (330)
T ss_pred HHHHHHHHHhcCCCCCEEEEC
Confidence 333 3345555555433
No 421
>PLN02366 spermidine synthase
Probab=95.57 E-value=0.15 Score=46.10 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHH-cCC------c---EEecCCCHHHHHHH-cCCcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGA------D---SFLVSRDQDEMQAA-MGTMD 249 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~-~ga------~---~~v~~~~~~~~~~~-~~~~d 249 (314)
...++||++|+|. |..+..+++..+. ++.+++.+++-. +++++ +.. + .++..+....+.+. .+.||
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi-~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVI-DVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHH-HHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 5578999998865 5566777887654 677777776544 33333 321 1 11222222344444 34699
Q ss_pred EEEEccCCc----------ccHHHHHHhhccCCEEEEEc
Q 021300 250 GIIDTVSAV----------HPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 250 ~v~d~~g~~----------~~~~~~~~~l~~~G~~v~~G 278 (314)
+||--...+ ..+..+.+.|+++|.++.-+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 988654331 23677889999999997654
No 422
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.56 E-value=0.078 Score=47.97 Aligned_cols=74 Identities=22% Similarity=0.252 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---C----CcEE-ecCCCHHHHHHHcCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---g----a~~~-v~~~~~~~~~~~~~~~d~v~d 253 (314)
.|.+|||.|+ |.+|...+..+...|.+|+++.++..+...+.+.+ + ...+ .|-.+++.+.++..++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4679999997 99999999988888999998888765432221111 1 1111 133444556666668999999
Q ss_pred ccC
Q 021300 254 TVS 256 (314)
Q Consensus 254 ~~g 256 (314)
+++
T Consensus 84 ~A~ 86 (322)
T PLN02986 84 TAS 86 (322)
T ss_pred eCC
Confidence 886
No 423
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.56 E-value=0.075 Score=51.77 Aligned_cols=96 Identities=19% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.+.+++|+|+|++|.+++..+...|++++++.++.++.+++.++++... +...+ ........+|+++++++...
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~--~~~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLAD--LENFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhH--hhhhccccCeEEEecccCCCCCC
Confidence 4678999999999999999999999999999998888888887776432 22211 11112235789998875321
Q ss_pred --cHHHHHHhhccCCEEEEEcCCC
Q 021300 260 --PLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
........+++.+.++++-..+
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~vY~P 478 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDAVYTP 478 (529)
T ss_pred CCCCcccHhhCCCCCEEEEeccCC
Confidence 0111234567777777775543
No 424
>PRK06932 glycerate dehydrogenase; Provisional
Probab=95.56 E-value=0.077 Score=48.14 Aligned_cols=84 Identities=20% Similarity=0.256 Sum_probs=52.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.|.++.|+|-|.+|...++.++.+|++|+.+.+..... .... ...+.++....|+|+-+..-..
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~------~~~~-------~~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV------CREG-------YTPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc------cccc-------cCCHHHHHHhCCEEEEcCCCChHHh
Confidence 57899999999999999999999999998876542110 0000 0123344445666666554211
Q ss_pred --cHHHHHHhhccCCEEEEEcC
Q 021300 260 --PLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~G~ 279 (314)
.-...+..|+++..+|.+|.
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aR 234 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGR 234 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 12345666666666666665
No 425
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.55 E-value=0.13 Score=46.38 Aligned_cols=90 Identities=20% Similarity=0.230 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~- 260 (314)
-.|.+|.|+|-|.+|...++.++.+|.+|++..+.. +.....+..|+.. . .+.++....|+|+-+..+...
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~-~s~~~A~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPG-KSFEVAKADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcc-hhhHHHHHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence 467899999999999999999999999999887663 3334445566632 1 234566679999998876432
Q ss_pred --H-HHHHHhhccCCEEEEEcC
Q 021300 261 --L-MPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 261 --~-~~~~~~l~~~G~~v~~G~ 279 (314)
+ ...+..|+++..+++...
T Consensus 86 ~V~~~eil~~MK~GaiL~f~hg 107 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFSHG 107 (335)
T ss_pred HHHHHHHHhcCCCCCEEEECCC
Confidence 1 235666777776666544
No 426
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.55 E-value=0.2 Score=44.32 Aligned_cols=97 Identities=21% Similarity=0.147 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCC---------cEEecCCCHHHHHHHcCCccEE
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---------DSFLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga---------~~~v~~~~~~~~~~~~~~~d~v 251 (314)
+.+.+||++|+|. |..+..+++.... ++++++.+++-.+.+.+.+.. -.++..+..+.+....+.||+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI 149 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI 149 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence 3456999998865 4455666666534 777787776655444332211 1122222233444445689998
Q ss_pred EEccCC----------cccHHHHHHhhccCCEEEEEcC
Q 021300 252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 252 ~d~~g~----------~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
+-.... ...+..+.+.|+++|.++....
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~~ 187 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQSE 187 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcCC
Confidence 754321 1225678899999999998743
No 427
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.55 E-value=0.073 Score=43.26 Aligned_cols=76 Identities=21% Similarity=0.408 Sum_probs=58.8
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCH----HH---HHH---HcCCccEE
Q 021300 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ----DE---MQA---AMGTMDGI 251 (314)
Q Consensus 183 ~g~~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~----~~---~~~---~~~~~d~v 251 (314)
+|-..||.| ++++|.+++..+...|+.+++.+-...+-.+.++++|.+.++.+.+. |. +.. ..+..|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 455567776 59999999999999999999999888888899999999888876653 21 111 12358999
Q ss_pred EEccCCc
Q 021300 252 IDTVSAV 258 (314)
Q Consensus 252 ~d~~g~~ 258 (314)
++|.|..
T Consensus 88 vncagia 94 (260)
T KOG1199|consen 88 VNCAGIA 94 (260)
T ss_pred eecccee
Confidence 9999954
No 428
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.55 E-value=0.13 Score=46.52 Aligned_cols=35 Identities=43% Similarity=0.649 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~ 216 (314)
-.|.++.|+|-|.+|...++.++.+|++|+.+.+.
T Consensus 143 L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~ 177 (311)
T PRK08410 143 IKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTS 177 (311)
T ss_pred cCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCC
Confidence 36899999999999999999999999999998875
No 429
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.53 E-value=0.12 Score=45.62 Aligned_cols=98 Identities=26% Similarity=0.408 Sum_probs=56.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhh-------------------H---HHHHHHcCC-cEEecCC--
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------K---SEAIERLGA-DSFLVSR-- 236 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~-------------------~---~~~~~~~ga-~~~v~~~-- 236 (314)
...+|+|+|+|++|..++..+...|. ++++++.+.-. . .+..+++.. ..+....
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 45789999999999999999999995 77777654111 0 111122221 1111111
Q ss_pred -CHHHHHHHc-CCccEEEEccCCcccHHHHHHhhcc-CCEEEEEcCC
Q 021300 237 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLVGAP 280 (314)
Q Consensus 237 -~~~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~-~G~~v~~G~~ 280 (314)
.++...++. ..+|+||||+.+...-..+.+..+. +=.++..|..
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 233333443 4799999999975433334444443 3446666554
No 430
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.53 E-value=0.09 Score=44.68 Aligned_cols=99 Identities=26% Similarity=0.207 Sum_probs=60.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEEc
Q 021300 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDT 254 (314)
Q Consensus 179 ~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~ 254 (314)
..++++++||-+|+|. |..+..+++.. .+++.++.+++....+.+ +++.+.+ +...+........+.||+|+-.
T Consensus 74 l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~ 151 (212)
T PRK00312 74 LELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFDRILVT 151 (212)
T ss_pred cCCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcCEEEEc
Confidence 3468999999998864 55555566653 488888888776544433 3343221 1111110000112469998876
Q ss_pred cCCcccHHHHHHhhccCCEEEEEcC
Q 021300 255 VSAVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
...........+.|+++|+++..-.
T Consensus 152 ~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 152 AAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred cCchhhhHHHHHhcCCCcEEEEEEc
Confidence 5555556778899999999877643
No 431
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.51 E-value=0.17 Score=44.99 Aligned_cols=96 Identities=21% Similarity=0.229 Sum_probs=72.1
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++....--.|.+++|+|. ..+|.-...++...+++|++.-.... .+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence 467777777777777664468999999996 99999999999999999987543221 22
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+.. ---+.+++|..++.+|...
T Consensus 196 ~~~~~~ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 AELTKQADILIVAVGKPKL--ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHhCCEEEEecCCCCc--CCHHHcCCCCEEEEeeccc
Confidence 3445568999999998763 2355678999999999763
No 432
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.50 E-value=0.12 Score=49.22 Aligned_cols=89 Identities=26% Similarity=0.369 Sum_probs=60.2
Q ss_pred EEEEEc-CChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc---H
Q 021300 186 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---L 261 (314)
Q Consensus 186 ~vlI~G-ag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~---~ 261 (314)
+|.|+| .|.+|.+.+..++..|.+|+++++++++..++++++|+.. ..+. .+....+|+||-++..... +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~---~~~~---~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY---ANDN---IDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee---ccCH---HHHhccCCEEEEecCHHHHHHHH
Confidence 588888 5999999999999999999999998877666667777631 1111 1233467888888775431 2
Q ss_pred HHHHHhhccCCEEEEEcCC
Q 021300 262 MPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~~G~~ 280 (314)
......++++..++.+++.
T Consensus 76 ~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHhhCCCCCEEEEcccc
Confidence 2333344566677777753
No 433
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.49 E-value=0.095 Score=44.27 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=28.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~ 216 (314)
..+|+|+|+|++|..+++.+...|. ++++++.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999999998 67777765
No 434
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.49 E-value=0.11 Score=49.49 Aligned_cols=72 Identities=26% Similarity=0.350 Sum_probs=50.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHH---HHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~---~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
.+.+++|+|+|.+|+.++..+...|++|+++++.. +...+. .++.|.+.+. .+..+ +..+.+|+|+.++|..
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE---EFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch---hHhhcCCEEEECCCCC
Confidence 46889999998899999999999999999998874 222221 2344655332 22222 3345799999998853
No 435
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.12 Score=44.40 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=36.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER 226 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~ 226 (314)
++.+++|.|+ |++|...++.+...|++|+++.+++++..++.++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~ 49 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA 49 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH
Confidence 4578999997 9999999999998999999999988766555443
No 436
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.14 Score=45.38 Aligned_cols=95 Identities=21% Similarity=0.253 Sum_probs=71.6
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++....--.|.+++|+|. ..+|.=...++...+++|++.-..... +
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~---------------------l 196 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN---------------------L 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 457766666667776664568999999996 999999999999999998775533322 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 280 (314)
++....+|+++-++|.+..+ --+.+++|-.++.+|..
T Consensus 197 ~~~~~~ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin 233 (284)
T PRK14177 197 PSIVRQADIIVGAVGKPEFI--KADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHHhhCCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence 23445689999999988632 36788999999999975
No 437
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.48 E-value=0.016 Score=55.26 Aligned_cols=94 Identities=16% Similarity=0.160 Sum_probs=58.0
Q ss_pred cCCCCCCCEEE----EEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHHcCCccEE
Q 021300 178 YGLDKPGMHVG----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 178 ~~~~~~g~~vl----I~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~~~~~d~v 251 (314)
..++++|+.+| |+|+ |++|.+++|+++..|++|+.+.+.+.+. ...+..+.+ .++|....+....+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~l~~~---- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-AAGWGDRFGALVFDATGITDPADLKAL---- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-ccCcCCcccEEEEECCCCCCHHHHHHH----
Confidence 34467888887 7765 9999999999999999998876655422 111122333 33443332111111100
Q ss_pred EEccCCcccHHHHHHhhccCCEEEEEcCCCC
Q 021300 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (314)
Q Consensus 252 ~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 282 (314)
...+...++.|.++|+++.++....
T Consensus 103 ------~~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 103 ------YEFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred ------HHHHHHHHHhccCCCEEEEEccccc
Confidence 0135667788888999999987653
No 438
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.13 Score=44.36 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=50.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc-----CCcE---EecCCCHHHHH-------HHcCC
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQ-------AAMGT 247 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~-----ga~~---~v~~~~~~~~~-------~~~~~ 247 (314)
+.++||.|+ |++|...++.+...|++++++++++++..++.+.+ +... -.|..+++.+. +..++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467899987 99999988888888999999999887765554332 2211 12444443322 22347
Q ss_pred ccEEEEccC
Q 021300 248 MDGIIDTVS 256 (314)
Q Consensus 248 ~d~v~d~~g 256 (314)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999987
No 439
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.47 E-value=0.12 Score=47.14 Aligned_cols=33 Identities=39% Similarity=0.654 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~ 215 (314)
.|.++-|+|.|.+|...++.++.+|.+|+++++
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~ 173 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDP 173 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECC
Confidence 388999999999999999999999999999998
No 440
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.45 E-value=0.18 Score=49.14 Aligned_cols=89 Identities=22% Similarity=0.307 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~--- 259 (314)
.|.++.|+|.|.+|...++.++.+|.+|+++++.... +..+.+|.... .+.++....|+|+-+.....
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP--ERAAQLGVELV-------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999875332 12235565432 13345566899888876431
Q ss_pred -cH-HHHHHhhccCCEEEEEcCC
Q 021300 260 -PL-MPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~G~~ 280 (314)
.+ ...+..|+++..++.++..
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aRG 232 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCARG 232 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCCC
Confidence 12 4577888999999988773
No 441
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.44 E-value=0.1 Score=46.10 Aligned_cols=104 Identities=17% Similarity=0.063 Sum_probs=64.9
Q ss_pred hhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC-cEE-ecCCCHHHHHHHcCCccEE
Q 021300 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSF-LVSRDQDEMQAAMGTMDGI 251 (314)
Q Consensus 174 ~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga-~~~-v~~~~~~~~~~~~~~~d~v 251 (314)
++... .++++.+||=+|+|. |..+..+++..+++++.++.++.....+.+.+.. +.+ +...+........+.||+|
T Consensus 44 ~l~~l-~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V 121 (263)
T PTZ00098 44 ILSDI-ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMI 121 (263)
T ss_pred HHHhC-CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEE
Confidence 34444 368999999898864 5556777777788999999998877666554432 111 1111111100112469998
Q ss_pred EEcc-----C---CcccHHHHHHhhccCCEEEEEcC
Q 021300 252 IDTV-----S---AVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 252 ~d~~-----g---~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
+..- . -...+..+.+.|+|+|+++....
T Consensus 122 ~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 122 YSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 8621 1 12246778899999999998754
No 442
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.44 E-value=0.14 Score=44.93 Aligned_cols=94 Identities=22% Similarity=0.262 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCC-cE-EecCCCHHHHH-HHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-DS-FLVSRDQDEMQ-AAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga-~~-~v~~~~~~~~~-~~~~~~d~v~d~~ 255 (314)
.++.+||=+|+|. |..+..+++. |.+|+.++.+++....+.+. .|. +. -+...+...+. ...+.||+|+-..
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence 4567888888864 6777777774 88999999998876555433 232 11 12223332222 2345799988542
Q ss_pred C-----C-cccHHHHHHhhccCCEEEEE
Q 021300 256 S-----A-VHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 256 g-----~-~~~~~~~~~~l~~~G~~v~~ 277 (314)
. + ...+..+.+.|+++|+++.+
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2 1 12477889999999999875
No 443
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.42 E-value=0.11 Score=47.50 Aligned_cols=102 Identities=20% Similarity=0.293 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCChhhHHHHHHHc----CCcEEecCCCHHHHHHHcCCccEEEEcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g~-~vi~v~~~~~~~~~~~~~~----ga~~~v~~~~~~~~~~~~~~~d~v~d~~ 255 (314)
+...+++|+|+|..|.+.+..+.. .+. ++.++.+++++.+++++++ |.. +....+ ..+.....|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 455789999999999887777764 564 7888999988888887755 332 222233 233445689999998
Q ss_pred CCcccHHHHHHhhccCCEEEEEcCC-CCCcccch
Q 021300 256 SAVHPLMPLIGLLKSQGKLVLVGAP-EKPLELPA 288 (314)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~G~~-~~~~~~~~ 288 (314)
.....+- -...++++-.+..+|.. +.+.+++.
T Consensus 206 ~s~~p~i-~~~~l~~g~~v~~vg~d~~~~rEld~ 238 (330)
T PRK08291 206 PSEEPIL-KAEWLHPGLHVTAMGSDAEHKNEIAP 238 (330)
T ss_pred CCCCcEe-cHHHcCCCceEEeeCCCCCCcccCCH
Confidence 7653211 12346777777777764 34455554
No 444
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.11 Score=45.12 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.|.++||.|+ |.+|...++.+...|++++++.++++.. ++.++ .+... ..|-.+++.+... .+.+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 9999999999988999999998887654 33333 23221 2234444333222 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 445
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.40 E-value=0.077 Score=46.17 Aligned_cols=77 Identities=26% Similarity=0.426 Sum_probs=47.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhh-------------------HH---HHHHHcCCc-EEec---CC
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------KS---EAIERLGAD-SFLV---SR 236 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~-------------------~~---~~~~~~ga~-~~v~---~~ 236 (314)
+.+|+|+|+|++|..+++.+...|. ++++++.+.-+ .+ +.++++..+ .+.. .-
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3779999999999999999999997 66666543211 11 112222211 1111 11
Q ss_pred CHHHHHHHcCCccEEEEccCCccc
Q 021300 237 DQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 237 ~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
+.+.+.++..++|+|+||+.+...
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~~ 127 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVEV 127 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHHH
Confidence 223445556789999999998763
No 446
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.40 E-value=0.12 Score=45.87 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcC---Cc---E---EecCCCHHH--------HHH
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD---S---FLVSRDQDE--------MQA 243 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~g---a~---~---~v~~~~~~~--------~~~ 243 (314)
-.|.++||.|+ .++|.+++..+...|++|++..+++++.++..+++. .. . ..|-...+. +++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788899987 999999999999999999999999988766655432 21 1 123332222 112
Q ss_pred HcCCccEEEEccCCc
Q 021300 244 AMGTMDGIIDTVSAV 258 (314)
Q Consensus 244 ~~~~~d~v~d~~g~~ 258 (314)
..+++|+.+++.|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 245799999998843
No 447
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=47.12 Aligned_cols=35 Identities=29% Similarity=0.548 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~ 216 (314)
-.|.++.|+|.|.+|...++.++.+|++|+++.+.
T Consensus 146 l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 146 LEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred cCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCC
Confidence 35789999999999999999999999999988764
No 448
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.13 Score=44.34 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=49.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc----CCcE-E--ecCCCHHHHHH----HcCCccEEE
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-F--LVSRDQDEMQA----AMGTMDGII 252 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~----ga~~-~--v~~~~~~~~~~----~~~~~d~v~ 252 (314)
.+++|.|+ |++|...++.+...|++|+++++++++...+.+.+ +... + .|-.+++.+.+ ....+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899987 99999999999989999999999887665554432 1111 1 23344433333 333689999
Q ss_pred EccCC
Q 021300 253 DTVSA 257 (314)
Q Consensus 253 d~~g~ 257 (314)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88774
No 449
>PLN02244 tocopherol O-methyltransferase
Probab=95.37 E-value=0.11 Score=47.81 Aligned_cols=96 Identities=22% Similarity=0.226 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCC-cE-EecCCCHHHHHHHcCCccEEEEccC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-DS-FLVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga-~~-~v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
+++++||=+|+|. |..+..+++..|++++.++.++...+.+.+ +.+. +. -+...+........+.||+|+-.-.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 6889998899864 667778888789999999999876544432 2232 11 1111121111112346999886432
Q ss_pred C------cccHHHHHHhhccCCEEEEEc
Q 021300 257 A------VHPLMPLIGLLKSQGKLVLVG 278 (314)
Q Consensus 257 ~------~~~~~~~~~~l~~~G~~v~~G 278 (314)
. ...+..+.+.|++||++++..
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 124678899999999999864
No 450
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.37 E-value=0.17 Score=49.38 Aligned_cols=91 Identities=26% Similarity=0.316 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCccc-
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~- 260 (314)
-.|.++.|+|.|.+|...++.++.+|++|+++++.... +..+++|...+ +.+.++....|+|+-+......
T Consensus 136 l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~------~~l~ell~~aDvV~l~lPlt~~T 207 (525)
T TIGR01327 136 LYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP--ERAEQLGVELV------DDLDELLARADFITVHTPLTPET 207 (525)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEc------CCHHHHHhhCCEEEEccCCChhh
Confidence 36789999999999999999999999999998874221 22245564321 1234555678998887763311
Q ss_pred ----HHHHHHhhccCCEEEEEcCC
Q 021300 261 ----LMPLIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~G~~ 280 (314)
-...+..|+++..++.++..
T Consensus 208 ~~li~~~~l~~mk~ga~lIN~aRG 231 (525)
T TIGR01327 208 RGLIGAEELAKMKKGVIIVNCARG 231 (525)
T ss_pred ccCcCHHHHhcCCCCeEEEEcCCC
Confidence 13567788888888888773
No 451
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.35 E-value=0.17 Score=44.97 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=72.4
Q ss_pred cccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHH
Q 021300 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (314)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~ 240 (314)
..+||+..+.+..++....--.|.+++|+|. ..+|.=...++...+++|++.-......
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl-------------------- 195 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL-------------------- 195 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH--------------------
Confidence 3467777777777777664568999999996 8999999999998999987654433222
Q ss_pred HHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 241 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
++.+..+|+++-++|.+..+. -+.+++|-.++.+|...
T Consensus 196 -~~~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 196 -KSHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 233 (282)
T ss_pred -HHHhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence 233455899999999886332 47889999999999753
No 452
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.34 E-value=0.35 Score=43.84 Aligned_cols=103 Identities=26% Similarity=0.204 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCChhhHHHHHHHcCCc--EEecCCCHHHHHHHcCCccEEEEccCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~-~g-~~vi~v~~~~~~~~~~~~~~ga~--~~v~~~~~~~~~~~~~~~d~v~d~~g~ 257 (314)
+...+++|+|+|..|...+..+.. .+ .++.++.+++++.+++++++... .+....+ ..+....+|+|+.++++
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~---~~~av~~aDIVi~aT~s 199 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTD---LEAAVRQADIISCATLS 199 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCC---HHHHHhcCCEEEEeeCC
Confidence 567889999999999988764443 55 48999999999888888776321 1122222 22344679999998876
Q ss_pred cccHHHHHHhhccCCEEEEEcCCC-CCcccch
Q 021300 258 VHPLMPLIGLLKSQGKLVLVGAPE-KPLELPA 288 (314)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~ 288 (314)
...+ .-.+.++++-.+..+|... ...+++.
T Consensus 200 ~~pv-l~~~~l~~g~~i~~ig~~~~~~~El~~ 230 (314)
T PRK06141 200 TEPL-VRGEWLKPGTHLDLVGNFTPDMRECDD 230 (314)
T ss_pred CCCE-ecHHHcCCCCEEEeeCCCCcccccCCH
Confidence 5321 1125678877666777643 3345554
No 453
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.34 E-value=0.2 Score=52.34 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=55.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHC-CCe-------------EEEEeCChhhHHHHHHHc-CCcE-EecCCCHHHHHHHcC
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAMG 246 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~-g~~-------------vi~v~~~~~~~~~~~~~~-ga~~-~v~~~~~~~~~~~~~ 246 (314)
...+|+|+|+|.+|..++..+... +++ |++.+.+.++.+++++.+ +++. .+|..+.+.+.++..
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 466899999999999999888754 334 666666777777777766 4433 345677776666656
Q ss_pred CccEEEEccCCc
Q 021300 247 TMDGIIDTVSAV 258 (314)
Q Consensus 247 ~~d~v~d~~g~~ 258 (314)
++|+|+.++...
T Consensus 648 ~~DaVIsalP~~ 659 (1042)
T PLN02819 648 QVDVVISLLPAS 659 (1042)
T ss_pred CCCEEEECCCch
Confidence 799999998754
No 454
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.33 E-value=0.13 Score=43.21 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=58.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHH---HcCCcEE-ecCCCHHHHHHHcCCccEEEEccC
Q 021300 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 181 ~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~---~~ga~~~-v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
..++.+||-+|+|. |..+..+++. |.+|++++.++...+.+.+ ..+...+ +...+.... ...+.||+|+....
T Consensus 28 ~~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~ 104 (197)
T PRK11207 28 VVKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVV 104 (197)
T ss_pred cCCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecc
Confidence 45678899999875 7777788774 8899999999875544332 2232211 111111111 12346999987643
Q ss_pred C--------cccHHHHHHhhccCCEEEEE
Q 021300 257 A--------VHPLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 257 ~--------~~~~~~~~~~l~~~G~~v~~ 277 (314)
- ...+..+.+.|+++|+++.+
T Consensus 105 ~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 105 LMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1 12366788889999996554
No 455
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.33 E-value=0.13 Score=49.52 Aligned_cols=73 Identities=15% Similarity=0.269 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~ 259 (314)
..+.+++|+|+|++|.+++..+...|++++++.++.++.+++.++++... +...+ ... ...+|++++|+....
T Consensus 330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~~---~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLES---LPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echhH---hcc-cCCCCEEEEcCCCCC
Confidence 46788999999999999999999999999888888887777776655322 22111 111 246999999987543
No 456
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.32 E-value=0.3 Score=44.11 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.4
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCChhh
Q 021300 182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK 219 (314)
Q Consensus 182 ~~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~~~ 219 (314)
-.|.++||.|+ +++|.++++.+...|++|++ .+..++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~ 46 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPA 46 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcch
Confidence 35789999988 88999999999999999988 554333
No 457
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.31 E-value=0.27 Score=45.19 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=58.8
Q ss_pred EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCh-hhHHHHHHHcCCcE---------------EecCCCHHHHHHHcCCc
Q 021300 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP-SKKSEAIERLGADS---------------FLVSRDQDEMQAAMGTM 248 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~-~~~~~~~~~~ga~~---------------~v~~~~~~~~~~~~~~~ 248 (314)
+|.|+|.|.+|...++.+... +.+++.+.... +....+++++|.+. +....+ ..++..++
T Consensus 3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~---~~el~~~v 79 (341)
T PRK04207 3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGT---IEDLLEKA 79 (341)
T ss_pred EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCC---hhHhhccC
Confidence 588999999999988887754 56888776643 33444455454321 111122 22333579
Q ss_pred cEEEEccCCcccHHHHHHhhccCCEEEEEcC
Q 021300 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 249 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~ 279 (314)
|+|+||++.......+..+++.|-++++-|.
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~ 110 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAGVKAIFQGG 110 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence 9999999987666666667777756666655
No 458
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.57 Score=38.69 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=57.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cE-E--ecCCCHHHHHHH-------cCCccEEEE
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-F--LVSRDQDEMQAA-------MGTMDGIID 253 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~-~--v~~~~~~~~~~~-------~~~~d~v~d 253 (314)
+++|.|++++|...++.+...|++|++.++++++.+++...++. .. . .|..+++.+.+. .+.+|.+|+
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~ 81 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVA 81 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 57888884455556666666799999999988776666544431 11 1 356665433322 246899998
Q ss_pred ccCCcccHHHHHHhhccCC------EEEEE-cCCCC
Q 021300 254 TVSAVHPLMPLIGLLKSQG------KLVLV-GAPEK 282 (314)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G------~~v~~-G~~~~ 282 (314)
.+-... ......+.+..| +++.+ |+...
T Consensus 82 ~vh~~~-~~~~~~~~~~~gv~~~~~~~~h~~gs~~~ 116 (177)
T PRK08309 82 WIHSSA-KDALSVVCRELDGSSETYRLFHVLGSAAS 116 (177)
T ss_pred eccccc-hhhHHHHHHHHccCCCCceEEEEeCCcCC
Confidence 876543 445555555444 34444 66553
No 459
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.29 E-value=0.17 Score=44.10 Aligned_cols=75 Identities=17% Similarity=0.314 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcE---EecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~---~v~~~~~~~~~~~-------~~~~ 248 (314)
.+.++||.|+ +.+|...+..+...|++++++.++.+..+++.++ .+.+. ..|-.+.+.+.+. .+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999987 9999999999999999999998887665544333 23322 2344444433221 2468
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999873
No 460
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.29 E-value=0.12 Score=45.25 Aligned_cols=75 Identities=15% Similarity=0.298 Sum_probs=50.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCh--hhHHHHHHHcCCc--E-EecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGAD--S-FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~~--~~~~~~~~~~ga~--~-~v~~~~~~~~~~~-------~~~ 247 (314)
.+.+++|.|+ +++|.+.++.+...|++|+++.++. +..+++.++++.. . ..|-.+++.+.++ .+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999885 7999999998888999999887653 3345555555432 1 1344444332222 247
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 461
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.28 E-value=0.29 Score=44.21 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=59.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCChhhHHHHHHHc-------CCcEEecCCCHHHHHHHcCCccEEEEccC
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~--~vi~v~~~~~~~~~~~~~~-------ga~~~v~~~~~~~~~~~~~~~d~v~d~~g 256 (314)
+|.|+|+|.+|..++..+...|. +++++++++++.+.++..+ +....+...+.+ ...++|++|.++|
T Consensus 2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~----~l~~aDIVIitag 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS----DCKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH----HhCCCCEEEEccC
Confidence 68899999999999998888884 7888998877766555544 222112222221 2368999999998
Q ss_pred Ccc---------------cHHH---HHHhhccCCEEEEEcCC
Q 021300 257 AVH---------------PLMP---LIGLLKSQGKLVLVGAP 280 (314)
Q Consensus 257 ~~~---------------~~~~---~~~~l~~~G~~v~~G~~ 280 (314)
.+. .+.. .+....+.+.++.++.|
T Consensus 78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP 119 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNP 119 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCh
Confidence 631 1222 23334567888888754
No 462
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.18 Score=44.52 Aligned_cols=74 Identities=19% Similarity=0.291 Sum_probs=50.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH---cCCcEE---ecCCCHHHHHHH-------cCCcc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTMD 249 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~---~ga~~~---v~~~~~~~~~~~-------~~~~d 249 (314)
..+++|.|+ |.+|...++.+...|++|+++.++.++..++.++ .+.... .|-.+.+.+.++ .+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 457899997 9999999999988999999988877655444332 243322 244444433322 24689
Q ss_pred EEEEccCC
Q 021300 250 GIIDTVSA 257 (314)
Q Consensus 250 ~v~d~~g~ 257 (314)
.+|.++|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99999874
No 463
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.26 E-value=0.15 Score=40.43 Aligned_cols=94 Identities=23% Similarity=0.320 Sum_probs=53.5
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChhhH----------------------HHHHHHcC-CcEEecC---CCH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK----------------------SEAIERLG-ADSFLVS---RDQ 238 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~~~----------------------~~~~~~~g-a~~~v~~---~~~ 238 (314)
+|+|+|+|++|...++.+...|. ++++++...-+. .+..+++. ...+... -..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 48899999999999999999998 666665441111 11112222 1111111 111
Q ss_pred HHHHHHcCCccEEEEccCCcccHHHHHHhhccCCE-EEEEcC
Q 021300 239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVGA 279 (314)
Q Consensus 239 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~G~ 279 (314)
+...+...++|+|++|..+........+..+..+. ++..|.
T Consensus 81 ~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~ 122 (143)
T cd01483 81 DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGG 122 (143)
T ss_pred hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 22234456899999999886543444455555554 444444
No 464
>PRK08328 hypothetical protein; Provisional
Probab=95.26 E-value=0.14 Score=44.37 Aligned_cols=32 Identities=38% Similarity=0.664 Sum_probs=27.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeC
Q 021300 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST 215 (314)
Q Consensus 184 g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~ 215 (314)
+.+|+|+|+|++|..+++.+...|. ++++++.
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4679999999999999999999998 5666653
No 465
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.24 E-value=0.13 Score=44.43 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCc--EEe--cCC--CHHH-------HHH
Q 021300 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SFL--VSR--DQDE-------MQA 243 (314)
Q Consensus 181 ~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~--~~v--~~~--~~~~-------~~~ 243 (314)
..++.++||.|+ |.+|...++.+...|++|+++.++.++..++.+++ +.. .++ +-. +.+. +.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999987 99999999988888999999999887654544333 221 111 221 2222 222
Q ss_pred HcCCccEEEEccCC
Q 021300 244 AMGTMDGIIDTVSA 257 (314)
Q Consensus 244 ~~~~~d~v~d~~g~ 257 (314)
..+.+|.+|.++|.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 23469999998864
No 466
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.17 Score=45.72 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh----------hhHHHHH---HHcCCcEE---ecCCCHHHHHH--
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAI---ERLGADSF---LVSRDQDEMQA-- 243 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~----------~~~~~~~---~~~ga~~~---v~~~~~~~~~~-- 243 (314)
.|.++||.|+ +++|.++++.+...|++|+++.++. ++.+++. +..+.... .|-.+++.+..
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999987 9999999999999999999988863 2333332 33343222 23344433222
Q ss_pred -----HcCCccEEEEcc-C
Q 021300 244 -----AMGTMDGIIDTV-S 256 (314)
Q Consensus 244 -----~~~~~d~v~d~~-g 256 (314)
..+.+|++|+++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 224699999988 6
No 467
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.24 E-value=0.17 Score=44.20 Aligned_cols=78 Identities=31% Similarity=0.438 Sum_probs=47.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCChh-------------------hHH---HHHHHcCC-cEEecC---
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKS---EAIERLGA-DSFLVS--- 235 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~-~vi~v~~~~~-------------------~~~---~~~~~~ga-~~~v~~--- 235 (314)
...+|+|+|+|++|..+++.+...|. ++++++.+.- +.+ +.++++.. ..+...
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 34789999999999999999999997 6666654311 111 11122221 111111
Q ss_pred CCHHHHHHHcCCccEEEEccCCccc
Q 021300 236 RDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 236 ~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
-+++...+....+|+||+|+.+...
T Consensus 111 i~~~~~~~~~~~~DiVi~~~D~~~~ 135 (245)
T PRK05690 111 LDDDELAALIAGHDLVLDCTDNVAT 135 (245)
T ss_pred CCHHHHHHHHhcCCEEEecCCCHHH
Confidence 1123344555689999999987753
No 468
>PRK01581 speE spermidine synthase; Validated
Probab=95.23 E-value=0.31 Score=44.84 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcC-----------Cc--EEecCCCHHHHHHHcCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG-----------AD--SFLVSRDQDEMQAAMGT 247 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~g-----------a~--~~v~~~~~~~~~~~~~~ 247 (314)
....+|||+|+| .|..+..+++..+ .++++++.+++-. ++++++. .. .++..+..+++....+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVI-elAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMI-NMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHH-HHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 445699999975 4667777777654 4787888777655 4445421 01 12222223445444557
Q ss_pred ccEEEEccCCc-----------ccHHHHHHhhccCCEEEEEcC
Q 021300 248 MDGIIDTVSAV-----------HPLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 248 ~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~G~ 279 (314)
||+||--..++ ..+..+.+.|+++|.++.-..
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99988665332 136678899999999877644
No 469
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.23 E-value=0.31 Score=44.29 Aligned_cols=85 Identities=16% Similarity=0.170 Sum_probs=54.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----------cCCc------EEecCCCHHHHHHHcCCc
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----------LGAD------SFLVSRDQDEMQAAMGTM 248 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----------~ga~------~~v~~~~~~~~~~~~~~~ 248 (314)
.+|.|+|+|.+|...++.+...|.+|++++.+++...++.+. .+.. .+-.. ..+.+...++
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~l~~av~~a 84 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFV---ATIEACVADA 84 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceec---CCHHHHhcCC
Confidence 579999999999999999999999999999988755443221 1110 00000 1123445689
Q ss_pred cEEEEccCCcc-----cHHHHHHhhccCC
Q 021300 249 DGIIDTVSAVH-----PLMPLIGLLKSQG 272 (314)
Q Consensus 249 d~v~d~~g~~~-----~~~~~~~~l~~~G 272 (314)
|+|++++.... .+..+.+.++++-
T Consensus 85 DlViEavpE~l~vK~~lf~~l~~~~~~~a 113 (321)
T PRK07066 85 DFIQESAPEREALKLELHERISRAAKPDA 113 (321)
T ss_pred CEEEECCcCCHHHHHHHHHHHHHhCCCCe
Confidence 99999987542 2333444555543
No 470
>PRK08264 short chain dehydrogenase; Validated
Probab=95.21 E-value=0.13 Score=44.09 Aligned_cols=71 Identities=25% Similarity=0.329 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCChhhHHHHHHHcCCc--E-EecCCCHHHHHHHc---CCccEEEEc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--S-FLVSRDQDEMQAAM---GTMDGIIDT 254 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~-~vi~v~~~~~~~~~~~~~~ga~--~-~v~~~~~~~~~~~~---~~~d~v~d~ 254 (314)
.+.+++|.|+ |.+|...++.+...|+ +|+++.+++++..+ .+.+ . ..|-.+++.+.+.. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4578999987 9999999999999999 99999988765432 3322 1 13445555444433 358999999
Q ss_pred cCC
Q 021300 255 VSA 257 (314)
Q Consensus 255 ~g~ 257 (314)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 886
No 471
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.21 E-value=0.18 Score=43.47 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc---CCcEE---ecCCCHHHHHHH-------cCCc
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~---ga~~~---v~~~~~~~~~~~-------~~~~ 248 (314)
++.++||.|+ |.+|...++.+...|++|++++++.++..++.+.+ +.+.. .|-.+.+.+.++ .+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999997 99999999999999999999998877665553332 32221 233444333322 2468
Q ss_pred cEEEEccC
Q 021300 249 DGIIDTVS 256 (314)
Q Consensus 249 d~v~d~~g 256 (314)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999987
No 472
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.21 E-value=0.13 Score=46.54 Aligned_cols=74 Identities=26% Similarity=0.360 Sum_probs=57.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHH--HHHHcC-Cc---EE--ecCCCHHHHHHHcCCccEEEE
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AIERLG-AD---SF--LVSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~--~~~~~g-a~---~~--v~~~~~~~~~~~~~~~d~v~d 253 (314)
.+.+|+|.|| |-+|...+..+..+|++|..++|+++.... .++++. +. .+ -|-.+++.+.+...++|.||.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 5788999998 999999999999999999999999886433 355665 32 11 233455677777889999999
Q ss_pred ccC
Q 021300 254 TVS 256 (314)
Q Consensus 254 ~~g 256 (314)
++.
T Consensus 85 ~As 87 (327)
T KOG1502|consen 85 TAS 87 (327)
T ss_pred eCc
Confidence 876
No 473
>PRK04148 hypothetical protein; Provisional
Probab=95.18 E-value=0.5 Score=37.04 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecC-CCHHHHHHHcCCccEEEEccCCccc
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-RDQDEMQAAMGTMDGIIDTVSAVHP 260 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~-~~~~~~~~~~~~~d~v~d~~g~~~~ 260 (314)
+.+.+++++|.| .|...+..++..|.+|++++.++...+.+ ++.+.+.+.+. -+++ .++-+++|+++..-.....
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el 90 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDL 90 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHH
Confidence 567889999998 78755556667899999999999877656 45565544332 1111 1344678999988776664
Q ss_pred HHHHHHhhcc-CCEEEEEcCCCC
Q 021300 261 LMPLIGLLKS-QGKLVLVGAPEK 282 (314)
Q Consensus 261 ~~~~~~~l~~-~G~~v~~G~~~~ 282 (314)
....+++.++ +..++..-..++
T Consensus 91 ~~~~~~la~~~~~~~~i~~l~~e 113 (134)
T PRK04148 91 QPFILELAKKINVPLIIKPLSGE 113 (134)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCC
Confidence 4445555444 444555433333
No 474
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.17 E-value=0.2 Score=44.40 Aligned_cols=87 Identities=17% Similarity=0.258 Sum_probs=55.6
Q ss_pred CEEEEEcCChHHHHHHHHHHH--CCCeEE-EEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccH
Q 021300 185 MHVGVVGLGGLGHVAVKFAKA--MGVKVT-VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~--~g~~vi-~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 261 (314)
-+|.|+|.|.+|...++.+.. .+.+++ +.++++++.+++.+++|....+ .+.+. +....|+|++|++.....
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~ee---ll~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPLDQ---LATHADIVVEAAPASVLR 81 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCHHH---HhcCCCEEEECCCcHHHH
Confidence 468899999999988877765 366776 4456666666777777743222 22222 234578888888876545
Q ss_pred HHHHHhhccCCEEEE
Q 021300 262 MPLIGLLKSQGKLVL 276 (314)
Q Consensus 262 ~~~~~~l~~~G~~v~ 276 (314)
+....+|+.+--++.
T Consensus 82 e~~~~aL~aGk~Vi~ 96 (271)
T PRK13302 82 AIVEPVLAAGKKAIV 96 (271)
T ss_pred HHHHHHHHcCCcEEE
Confidence 555666665544443
No 475
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.21 Score=43.47 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-HHHHHH---HcCCcE---EecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-~~~~~~---~~ga~~---~v~~~~~~~~~~~-------~~~ 247 (314)
.+.++||.|+ +++|..+++.+...|++++++.++.++ ..++.+ ..+.+. ..|-.+++.+.+. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 999999999999999999998876532 233322 224322 1233444332222 246
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 476
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.16 E-value=0.55 Score=40.89 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEe
Q 021300 182 KPGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVIS 214 (314)
Q Consensus 182 ~~g~~vlI~Gag---~vG~~a~~~a~~~g~~vi~v~ 214 (314)
-+|.++||.|++ ++|...+..+...|++++++.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 357899999983 799999999999999998864
No 477
>PRK09135 pteridine reductase; Provisional
Probab=95.14 E-value=0.15 Score=43.82 Aligned_cols=74 Identities=15% Similarity=0.208 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh-hHHHHHHHc----CCc---EEecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERL----GAD---SFLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~-~~~~~~~~~----ga~---~~v~~~~~~~~~~~-------~~ 246 (314)
.+.++||.|+ |.+|..+++.+...|++|+++.++.. ...++.+.+ +.. ...|-.+.+.+..+ .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999997 99999999998889999999988643 233332222 111 12244444433322 24
Q ss_pred CccEEEEccC
Q 021300 247 TMDGIIDTVS 256 (314)
Q Consensus 247 ~~d~v~d~~g 256 (314)
.+|++|.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 478
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.14 E-value=0.17 Score=48.20 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=48.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHH---HHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCc
Q 021300 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (314)
Q Consensus 183 ~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~---~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~ 258 (314)
.|.+++|+|+|.+|++++.+++..|++|++.+....... ...++.|.+.....+..+. ...++|+|+.+.|-.
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~---~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLEL---LDEDFDLMVKNPGIP 79 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHH---hcCcCCEEEECCCCC
Confidence 367899999988999999999999999999876542211 2224556654432333222 122589999988743
No 479
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.14 E-value=0.22 Score=44.23 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=71.3
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....++....--.|.+++|+|. ..+|.=...++...+++|++.-..... +
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l 193 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRN---------------------L 193 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 467777777777776664468999999996 899999999999999988765333221 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+.. ---+.+++|-.++.+|...
T Consensus 194 ~~~~~~ADIvI~AvG~p~~--i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 194 KQLTKEADILVVAVGVPHF--IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHHhhCCEEEEccCCcCc--cCHHHcCCCcEEEEeeccc
Confidence 2344558899999998863 2356889999999999754
No 480
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.14 E-value=0.15 Score=46.17 Aligned_cols=74 Identities=23% Similarity=0.230 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHcCC---cE---EecCCCHHHHH----HH---cCCc
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---DS---FLVSRDQDEMQ----AA---MGTM 248 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~ga---~~---~v~~~~~~~~~----~~---~~~~ 248 (314)
+.++||.|+ +++|...++.+...| ++|+++.++.++.+++.+++.. .. ..|-.+.+.+. ++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568899998 999999998888889 8999999988777666666542 11 13444443322 22 2469
Q ss_pred cEEEEccCC
Q 021300 249 DGIIDTVSA 257 (314)
Q Consensus 249 d~v~d~~g~ 257 (314)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999873
No 481
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.12 E-value=0.19 Score=43.98 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-ChhhHHHHHHH----cCCcE---EecCCCHHHHHHH-------cC
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER----LGADS---FLVSRDQDEMQAA-------MG 246 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~-~~~~~~~~~~~----~ga~~---~v~~~~~~~~~~~-------~~ 246 (314)
+|.++||.|+ +++|...+..+...|++|+++.+ ++++.+.+.++ .+.+. ..|-.+++.+.++ .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999997 99999999999999999988765 34433333322 23321 1244444433222 24
Q ss_pred CccEEEEccC
Q 021300 247 TMDGIIDTVS 256 (314)
Q Consensus 247 ~~d~v~d~~g 256 (314)
.+|+++.++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
No 482
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.11 E-value=0.32 Score=45.18 Aligned_cols=60 Identities=25% Similarity=0.297 Sum_probs=44.5
Q ss_pred cccccccchhhhhhhhhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChh
Q 021300 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (314)
Q Consensus 158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~ 218 (314)
.++|.+..+.+.+- .++...+.--.|.+|.|-|.|.+|..+++.+...|++++++.++..
T Consensus 182 r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 34444444443333 4455444225899999999999999999999888999999998877
No 483
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.11 E-value=0.21 Score=44.43 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=70.9
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
.+||+..+....|+..+.--.|.+++|+|. ..+|.=...++...+++|++.-+.... +
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l 192 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L 192 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777776664457999999996 999999999999899988765433222 2
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+..+ --+.+++|-.++.+|...
T Consensus 193 ~~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 193 PAVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence 23445588999999987633 356788899999998764
No 484
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.11 E-value=0.17 Score=44.64 Aligned_cols=85 Identities=21% Similarity=0.313 Sum_probs=57.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~g---~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 262 (314)
++.|+|+|.+|...+..+...| .+++++++++++.+++.+.+|... . .+.+ +.....|+||-++.... +.
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-~--~~~~---~~~~~advVil~v~~~~-~~ 76 (267)
T PRK11880 4 KIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-A--TDNQ---EAAQEADVVVLAVKPQV-ME 76 (267)
T ss_pred EEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-c--CChH---HHHhcCCEEEEEcCHHH-HH
Confidence 5889999999998888877777 578888998887777766666532 1 1211 22346889998887654 55
Q ss_pred HHHHhhcc--CCEEEEE
Q 021300 263 PLIGLLKS--QGKLVLV 277 (314)
Q Consensus 263 ~~~~~l~~--~G~~v~~ 277 (314)
..++.+++ +..++.+
T Consensus 77 ~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 77 EVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHhhcCCEEEEe
Confidence 66655554 2344444
No 485
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=95.10 E-value=0.16 Score=44.94 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=49.0
Q ss_pred EEEEEcCChHHHHHHHHHHHC-CCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHHcCCccEEEEccCCcccHHHH
Q 021300 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~-g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 264 (314)
+|.|+|.|.+|...++..... +.++..+...+.......+.++.. +....+.+.+ ...+|+|++|++.....+.+
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~~d~~~l---~~~~DvVve~t~~~~~~e~~ 78 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVVSSVDAL---PQRPDLVVECAGHAALKEHV 78 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-CeeeCCHHHh---ccCCCEEEECCCHHHHHHHH
Confidence 688999999999888877765 456655553333222332333221 1122333322 34678888888766545556
Q ss_pred HHhhccCCEEE
Q 021300 265 IGLLKSQGKLV 275 (314)
Q Consensus 265 ~~~l~~~G~~v 275 (314)
..+|+.|--++
T Consensus 79 ~~aL~aGk~Vv 89 (265)
T PRK13303 79 VPILKAGIDCA 89 (265)
T ss_pred HHHHHcCCCEE
Confidence 66665544444
No 486
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.22 Score=44.01 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhh-------HHHHH---HHcCCcEE---ecCCCHHHHHHH----
Q 021300 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADSF---LVSRDQDEMQAA---- 244 (314)
Q Consensus 183 ~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~-------~~~~~---~~~ga~~~---v~~~~~~~~~~~---- 244 (314)
.+.++||.|+ |++|...++.+...|++++++.++.+. ..++. +..+.+.. .|-.+++.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4578999997 999999999998899999999887542 22222 23343321 344444433322
Q ss_pred ---cCCccEEEEccCC
Q 021300 245 ---MGTMDGIIDTVSA 257 (314)
Q Consensus 245 ---~~~~d~v~d~~g~ 257 (314)
.+.+|++|.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 2479999999874
No 487
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.08 E-value=0.11 Score=46.36 Aligned_cols=75 Identities=20% Similarity=0.268 Sum_probs=50.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHc------CCcE-EecCCC----------HHHHHHHcCC
Q 021300 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL------GADS-FLVSRD----------QDEMQAAMGT 247 (314)
Q Consensus 185 ~~vlI~Gag~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~------ga~~-~v~~~~----------~~~~~~~~~~ 247 (314)
.+|.|+|+|.+|...++.+...|.+|+++++++++.+++.+.. +.+. .++..+ .+.+.+....
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 4688999999999999988888999999999988776654321 1100 000000 0112234457
Q ss_pred ccEEEEccCCcc
Q 021300 248 MDGIIDTVSAVH 259 (314)
Q Consensus 248 ~d~v~d~~g~~~ 259 (314)
.|+||+|+....
T Consensus 82 aD~Vi~avpe~~ 93 (288)
T PRK09260 82 ADLVIEAVPEKL 93 (288)
T ss_pred CCEEEEeccCCH
Confidence 999999998653
No 488
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.28 Score=42.37 Aligned_cols=44 Identities=23% Similarity=0.262 Sum_probs=33.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCh-hhHHHHHHHcC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLG 228 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~-~~~~~~~~~~g 228 (314)
+++||.|+ |.+|...++.+...|++|+++.+.+ ++...+.++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~ 47 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYN 47 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccC
Confidence 36889987 9999999999988899999999876 44444444333
No 489
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=95.06 E-value=0.14 Score=43.48 Aligned_cols=44 Identities=25% Similarity=0.438 Sum_probs=34.1
Q ss_pred EEEEEcCChHHHHHHHHHHHC--CC-eEEEEeCChhhHHHHHHHcCC
Q 021300 186 HVGVVGLGGLGHVAVKFAKAM--GV-KVTVISTSPSKKSEAIERLGA 229 (314)
Q Consensus 186 ~vlI~Gag~vG~~a~~~a~~~--g~-~vi~v~~~~~~~~~~~~~~ga 229 (314)
+|.|+|+|.+|...+.+.+.- .. .+++.+++.++..++.+.++.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~ 48 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGR 48 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCC
Confidence 477899999999999998853 45 566777888888777777665
No 490
>PRK04266 fibrillarin; Provisional
Probab=95.06 E-value=0.39 Score=41.39 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHHc----CCcEEe-cCCCHHHHHHHcCCccEEEE
Q 021300 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL----GADSFL-VSRDQDEMQAAMGTMDGIID 253 (314)
Q Consensus 180 ~~~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~~----ga~~~v-~~~~~~~~~~~~~~~d~v~d 253 (314)
.+++|++||=+|+|+ |..+..+++..+ .+|+.++.+++..+.+.+.. +...+. +...+.....+.+.+|+++-
T Consensus 69 ~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~~ 147 (226)
T PRK04266 69 PIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIYQ 147 (226)
T ss_pred CCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEEE
Confidence 478999998888754 445566666653 58999999987655443321 122221 11111111223356999996
Q ss_pred ccCCcc----cHHHHHHhhccCCEEEEE
Q 021300 254 TVSAVH----PLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 254 ~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (314)
...... .+..+.+.|++||+++..
T Consensus 148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 444321 256788899999999983
No 491
>PLN02583 cinnamoyl-CoA reductase
Probab=95.06 E-value=0.53 Score=42.17 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=49.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChh--hHHHHHHHc---C--CcEE-ecCCCHHHHHHHcCCccEEE
Q 021300 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERL---G--ADSF-LVSRDQDEMQAAMGTMDGII 252 (314)
Q Consensus 182 ~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~--~~~~~~~~~---g--a~~~-v~~~~~~~~~~~~~~~d~v~ 252 (314)
.++.+|||.|+ |.+|...+..+...|.+|+++.++.. +.....+.+ + ...+ .|-.+.+.+.....++|.|+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 35678999998 99999999999999999999888532 222222333 1 1111 24445555666666788888
Q ss_pred Ecc
Q 021300 253 DTV 255 (314)
Q Consensus 253 d~~ 255 (314)
...
T Consensus 84 ~~~ 86 (297)
T PLN02583 84 CCF 86 (297)
T ss_pred EeC
Confidence 654
No 492
>PTZ00146 fibrillarin; Provisional
Probab=95.04 E-value=0.39 Score=42.89 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=63.9
Q ss_pred hhhHhcCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCChhhHHHHHHH----cCCcEEecC-CCHHHHHHHc
Q 021300 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER----LGADSFLVS-RDQDEMQAAM 245 (314)
Q Consensus 173 ~~l~~~~~~~~g~~vlI~Gag~vG~~a~~~a~~~g--~~vi~v~~~~~~~~~~~~~----~ga~~~v~~-~~~~~~~~~~ 245 (314)
..+.... +++|++||=+|+|+ |..+..++...+ .+|++++.+++..+++.+. .+...++.. ..++......
T Consensus 123 ~g~~~l~-IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p~~y~~~~ 200 (293)
T PTZ00146 123 GGVANIP-IKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYPQKYRMLV 200 (293)
T ss_pred CCcceec-cCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccChhhhhccc
Confidence 3455454 79999999899865 667778888775 3799988775433333322 233333322 1233233334
Q ss_pred CCccEEEEccCCcc----cHHHHHHhhccCCEEEEE
Q 021300 246 GTMDGIIDTVSAVH----PLMPLIGLLKSQGKLVLV 277 (314)
Q Consensus 246 ~~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (314)
+.+|+||-.+.... ....+..+|+++|++++.
T Consensus 201 ~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~ 236 (293)
T PTZ00146 201 PMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS 236 (293)
T ss_pred CCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence 57999988765433 133567799999999884
No 493
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.04 E-value=0.21 Score=43.46 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHH----cCC-cE---EecCCCHHHHHH----H---cCC
Q 021300 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGA-DS---FLVSRDQDEMQA----A---MGT 247 (314)
Q Consensus 184 g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~----~ga-~~---~v~~~~~~~~~~----~---~~~ 247 (314)
+.++||.|+ |.+|...++.+...|++++++.++..+.+++.++ .+. .. ..|-.+.+.+.. + .+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467999987 9999999999988999999999887655444333 221 11 123344433222 1 247
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 494
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.04 E-value=0.18 Score=42.07 Aligned_cols=113 Identities=16% Similarity=0.190 Sum_probs=76.6
Q ss_pred ccchhhhhhhhhhHhcCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEE
Q 021300 163 PLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~---------~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~ 232 (314)
.+||+..+....|+.... --.|.+++|+|. ..+|.=...++...|++|++...+.-.. . ...+ ..
T Consensus 32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~--~~ 106 (197)
T cd01079 32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGE--SI 106 (197)
T ss_pred ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-cccc--cc
Confidence 467777777777765542 268999999996 8999999999999999998775433111 0 0000 00
Q ss_pred ecCC----C-HHHHHHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 233 LVSR----D-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 233 v~~~----~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
-.+. + +..+.+....+|+|+-++|.+. +.---+.+++|-.++.+|...
T Consensus 107 ~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 107 RHEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCCc
Confidence 0011 1 1235567788999999999886 323367889999999999763
No 495
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.03 E-value=0.15 Score=44.73 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=49.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCC---hhhHHHHHHHcCCcE--EecCCCHHHHHHH-------cCC
Q 021300 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT 247 (314)
Q Consensus 183 ~g~~vlI~Ga---g~vG~~a~~~a~~~g~~vi~v~~~---~~~~~~~~~~~ga~~--~v~~~~~~~~~~~-------~~~ 247 (314)
.+.++||.|+ +++|.+.++.+...|++|+++.+. .++.+++.++++... -.|-.+++.+.++ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999983 689999998888899999887543 344445555555322 1344444333322 247
Q ss_pred ccEEEEccCC
Q 021300 248 MDGIIDTVSA 257 (314)
Q Consensus 248 ~d~v~d~~g~ 257 (314)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999874
No 496
>PRK03612 spermidine synthase; Provisional
Probab=95.03 E-value=0.23 Score=48.37 Aligned_cols=96 Identities=20% Similarity=0.154 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCChhhHHHHHHH---cC--------Cc--EEecCCCHHHHHHHcCC
Q 021300 182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIER---LG--------AD--SFLVSRDQDEMQAAMGT 247 (314)
Q Consensus 182 ~~g~~vlI~Gag~vG~~a~~~a~~~g-~~vi~v~~~~~~~~~~~~~---~g--------a~--~~v~~~~~~~~~~~~~~ 247 (314)
+++++||++|+|. |..+..+++... .+++.++.+++-.+.+ ++ +. .. .++..+..+.+....+.
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~a-r~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~ 373 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELA-RTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEK 373 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHH-HhCCcchhhhccccCCCceEEEEChHHHHHHhCCCC
Confidence 4568899998753 556667777544 5888888887766444 44 11 01 12222223444444568
Q ss_pred ccEEEEccCCcc-----------cHHHHHHhhccCCEEEEEcC
Q 021300 248 MDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGA 279 (314)
Q Consensus 248 ~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~G~ 279 (314)
||+|+-...+.. .++.+.+.|+++|.++.-..
T Consensus 374 fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~~ 416 (521)
T PRK03612 374 FDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQST 416 (521)
T ss_pred CCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEecC
Confidence 999886544321 25678899999999887643
No 497
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.02 E-value=0.18 Score=42.06 Aligned_cols=72 Identities=17% Similarity=0.298 Sum_probs=52.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCC--cEEe---cCCCHHH----HHHH---cCCccEE
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFL---VSRDQDE----MQAA---MGTMDGI 251 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga--~~~v---~~~~~~~----~~~~---~~~~d~v 251 (314)
...+|.|+ +++|.+..|.+...|+++.+.+.+.+..++.++.+|. ++.- |-.+++. +++. .+..+++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl 94 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL 94 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence 34566776 9999999999999999999999998888888888875 3322 2222222 2222 2469999
Q ss_pred EEccC
Q 021300 252 IDTVS 256 (314)
Q Consensus 252 ~d~~g 256 (314)
++|.|
T Consensus 95 VncAG 99 (256)
T KOG1200|consen 95 VNCAG 99 (256)
T ss_pred EEcCc
Confidence 99998
No 498
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.02 E-value=0.24 Score=44.33 Aligned_cols=96 Identities=19% Similarity=0.132 Sum_probs=69.6
Q ss_pred ccchhhhhhhhhhHhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHH
Q 021300 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (314)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~ 241 (314)
..||+..+....++....--.|.+++|+|. ..+|.=...++...|++|++.-......
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l--------------------- 195 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL--------------------- 195 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 356666666667776664468999999996 8999999999999999987764332222
Q ss_pred HHHcCCccEEEEccCCcccHHHHHHhhccCCEEEEEcCCC
Q 021300 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 242 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
.+....+|+++-++|.+.. ---+.+++|-.++.+|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~--i~~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 196 ASITREADILVAAAGRPNL--IGAEMVKPGAVVVDVGIHR 233 (297)
T ss_pred HHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEecccc
Confidence 2334458889999987763 2356788898999998653
No 499
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.17 Score=43.07 Aligned_cols=72 Identities=21% Similarity=0.240 Sum_probs=50.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCc-EEecCCCHHHHHHH----c-CCccEEEEccCC
Q 021300 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA----M-GTMDGIIDTVSA 257 (314)
Q Consensus 185 ~~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~-~~v~~~~~~~~~~~----~-~~~d~v~d~~g~ 257 (314)
++++|.|+ |.+|...++.+...|+++++++++++..+++. ..+.. ...|-.+.+.+.++ . +++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46888887 99999999988888999999999877665553 34443 22344444443332 2 258999998875
No 500
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.42 Score=39.82 Aligned_cols=84 Identities=18% Similarity=0.249 Sum_probs=53.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCChhhHHHHHHHcCCcEEecCCCHHHHHHH---cCCccEEEEccCCc---
Q 021300 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAV--- 258 (314)
Q Consensus 186 ~vlI~Ga-g~vG~~a~~~a~~~g~~vi~v~~~~~~~~~~~~~~ga~~~v~~~~~~~~~~~---~~~~d~v~d~~g~~--- 258 (314)
++||.|+ +++|...+..+... .+|+++.+++.. .-.|-.+++.++.. .+++|+++.+.|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 5888887 99999888877766 888888876431 11344444433332 24688888888732
Q ss_pred ----------------------ccHHHHHHhhccCCEEEEEcCCC
Q 021300 259 ----------------------HPLMPLIGLLKSQGKLVLVGAPE 281 (314)
Q Consensus 259 ----------------------~~~~~~~~~l~~~G~~v~~G~~~ 281 (314)
...+.+.+.++++|+++.+++..
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 11233344556789999887643
Done!