Your job contains 1 sequence.
>021304
MASNNFFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRL
LFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSPRFRFQVSATPDNRIFDSDPGRVTG
LRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPASASASASLYASDGSVR
MVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSSSQSNS
ANDEELGSKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERAGGMINLI
DVYCLFNRARGTVR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021304
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175274 - symbol:AT5G04920 "AT5G04920" species... 940 1.8e-94 1
MGI|MGI:1917410 - symbol:Vps36 "vacuolar protein sorting ... 338 1.1e-30 1
UNIPROTKB|Q86VN1 - symbol:VPS36 "Vacuolar protein-sorting... 290 1.4e-25 1
RGD|1309754 - symbol:Vps36 "vacuolar protein sorting 36 h... 287 2.9e-25 1
UNIPROTKB|P0C0A2 - symbol:Vps36 "Vacuolar protein-sorting... 287 2.9e-25 1
UNIPROTKB|F1RMD6 - symbol:VPS36 "Uncharacterized protein"... 286 3.6e-25 1
ZFIN|ZDB-GENE-030131-7753 - symbol:vps36 "vacuolar protei... 286 3.6e-25 1
UNIPROTKB|F1MT69 - symbol:VPS36 "Vacuolar protein-sorting... 284 5.9e-25 1
UNIPROTKB|A5PK00 - symbol:VPS36 "Vacuolar protein-sorting... 284 5.9e-25 1
UNIPROTKB|E2QV84 - symbol:VPS36 "Uncharacterized protein"... 283 7.6e-25 1
UNIPROTKB|Q6DDF4 - symbol:vps36 "Vacuolar protein-sorting... 283 7.6e-25 1
UNIPROTKB|F1P5B8 - symbol:VPS36 "Uncharacterized protein"... 279 2.0e-24 1
DICTYBASE|DDB_G0282045 - symbol:vps36 "vacuolar protein s... 253 6.4e-24 2
FB|FBgn0086785 - symbol:Vps36 "Vacuolar protein sorting 3... 259 3.7e-22 1
WB|WBGene00008919 - symbol:vps-36 species:6239 "Caenorhab... 201 3.5e-14 1
ASPGD|ASPL0000063501 - symbol:vps36 species:162425 "Emeri... 180 6.5e-14 2
UNIPROTKB|G4MUW2 - symbol:MGG_01704 "Vacuolar protein-sor... 176 7.6e-13 2
CGD|CAL0002025 - symbol:VPS36 species:5476 "Candida albic... 84 0.00046 2
UNIPROTKB|Q5AHK1 - symbol:VPS36 "Putative uncharacterized... 84 0.00046 2
POMBASE|SPBC3B9.09 - symbol:vps36 "ESCRT II complex subun... 114 0.00084 1
>TAIR|locus:2175274 [details] [associations]
symbol:AT5G04920 "AT5G04920" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000814 "ESCRT II
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AB005245 GO:GO:0032266 KO:K12190
InterPro:IPR007286 Pfam:PF04157 GO:GO:0000814 EMBL:AY072089
EMBL:AY096570 EMBL:AK228715 IPI:IPI00536002 RefSeq:NP_196112.1
UniGene:At.42973 ProteinModelPortal:Q9FF81 SMR:Q9FF81 IntAct:Q9FF81
STRING:Q9FF81 PaxDb:Q9FF81 PRIDE:Q9FF81 EnsemblPlants:AT5G04920.1
GeneID:830374 KEGG:ath:AT5G04920 TAIR:At5g04920 eggNOG:NOG262969
HOGENOM:HOG000006822 InParanoid:Q9FF81 OMA:CCIAIPL PhylomeDB:Q9FF81
ProtClustDB:CLSN2686452 Genevestigator:Q9FF81 Uniprot:Q9FF81
Length = 440
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 196/315 (62%), Positives = 238/315 (75%)
Query: 1 MASNNFFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRL 60
+A F A VT+SGRPVL NEVEC LLS++DI+ +DD F L+SG+ ILTTHRL
Sbjct: 8 IAIGGLFENAEVTTSGRPVLRRNEVECFLLSSIDID-SEDDPPRFTALRSGNLILTTHRL 66
Query: 61 LFL-SSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSPRFRFQVSATPDNRIFDSDPGRVT 119
+++ S S S +IPLSA+THI+S K+S+KS+FHSPR RFQ +DPG
Sbjct: 67 IWIPSQSNESVPSSIPLSAVTHIYSHKKSIKSMFHSPRIRFQ-----------ADPG--- 112
Query: 120 GLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET-TPSETGPXXXXXXXXXXXX-DG 177
S+V+T+V RGKGD++ FLSK+WECWRGRAW E + SET DG
Sbjct: 113 ---SIVVTIVFRGKGDFDGFLSKLWECWRGRAWEEEEKSESETSKSGSGTVAQGLYGNDG 169
Query: 178 SVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSSSQ 237
+VRMVG+ G+LRKEQE WESTD+SLQ+AFQDLNALM+KAKEMV LAEKMRQKLL+ SSQ
Sbjct: 170 TVRMVGLAGILRKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQ 229
Query: 238 SNSANDEELGSKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERAGGMI 297
+ S +DEE+GSKEEMQ W+LSVGI+SPVTKESAGALYHQ+LSRQLADFV+IPLE+AGGMI
Sbjct: 230 NGSTDDEEMGSKEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEKAGGMI 289
Query: 298 NLIDVYCLFNRARGT 312
+L D+Y FNRARGT
Sbjct: 290 SLTDMYYHFNRARGT 304
>MGI|MGI:1917410 [details] [associations]
symbol:Vps36 "vacuolar protein sorting 36 (yeast)"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0005768 "endosome" evidence=ISO] [GO:0005770
"late endosome" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IC]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 MGI:MGI:1917410
GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005764
GO:GO:0016197 GO:GO:0005770 GO:GO:0043130 GO:GO:0032266 KO:K12190
InterPro:IPR007286 Pfam:PF04157 PDB:2DX5 PDBsum:2DX5
eggNOG:NOG262969 HOGENOM:HOG000006822 OMA:CCIAIPL CTD:51028
OrthoDB:EOG4XPQG2 HOVERGEN:HBG083632 GeneTree:ENSGT00390000017209
EMBL:BC010811 EMBL:AK008946 IPI:IPI00129014 RefSeq:NP_081614.1
UniGene:Mm.41453 ProteinModelPortal:Q91XD6 SMR:Q91XD6
DIP:DIP-29247N STRING:Q91XD6 PhosphoSite:Q91XD6 PaxDb:Q91XD6
PRIDE:Q91XD6 Ensembl:ENSMUST00000033866 GeneID:70160 KEGG:mmu:70160
InParanoid:Q91XD6 EvolutionaryTrace:Q91XD6 NextBio:331106
Bgee:Q91XD6 CleanEx:MM_VPS36 Genevestigator:Q91XD6
GermOnline:ENSMUSG00000031479 Uniprot:Q91XD6
Length = 386
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 90/264 (34%), Positives = 138/264 (52%)
Query: 50 SGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSPRFRFQVSATPDNR 109
+G +L+THRL++ + +AIPLS I I + + S + + P N+
Sbjct: 37 AGTLLLSTHRLIWRDQKNNECCMAIPLSQIVFI---EEQAAGIGKSAKIVVHLHPAPSNK 93
Query: 110 IFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXX 169
+PG ++ I + + G E F ++ E R W ET P
Sbjct: 94 ----EPGPFQSSKNSYIRLSFKEHGQIE-FYRRLSEEMTQRRW-------ETVPVSQSLQ 141
Query: 170 XXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQK 229
G VR VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K
Sbjct: 142 TNKGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANK 201
Query: 230 LLAGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVK 287
+ Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++
Sbjct: 202 I---KEKQGDVTEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQ 254
Query: 288 IPLERAGGMINLIDVYCLFNRARG 311
PLE GG+++L +VYCL NRARG
Sbjct: 255 APLEERGGIMSLTEVYCLVNRARG 278
>UNIPROTKB|Q86VN1 [details] [associations]
symbol:VPS36 "Vacuolar protein-sorting-associated protein
36" species:9606 "Homo sapiens" [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005768 "endosome" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR021648 Pfam:PF11605
PROSITE:PS51495 GO:GO:0005829 GO:GO:0005634 GO:GO:0016020
GO:GO:0006355 GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005764 GO:GO:0016197
GO:GO:0005770 GO:GO:0016044 GO:GO:0032266 EMBL:AL359513 KO:K12190
InterPro:IPR007286 Pfam:PF04157 PDB:2ZME PDB:3CUQ PDBsum:2ZME
PDBsum:3CUQ EMBL:CH471274 PDB:2HTH PDBsum:2HTH eggNOG:NOG262969
OMA:CCIAIPL CTD:51028 OrthoDB:EOG4XPQG2 HOVERGEN:HBG083632
EMBL:AF151903 EMBL:AK023182 EMBL:AK289740 EMBL:CR933653
EMBL:BC037279 EMBL:BC050439 IPI:IPI00328932 IPI:IPI00646971
RefSeq:NP_057159.2 UniGene:Hs.109520 ProteinModelPortal:Q86VN1
SMR:Q86VN1 DIP:DIP-29249N STRING:Q86VN1 PhosphoSite:Q86VN1
DMDM:73920464 PaxDb:Q86VN1 PRIDE:Q86VN1 DNASU:51028
Ensembl:ENST00000378060 GeneID:51028 KEGG:hsa:51028 UCSC:uc001vgq.3
GeneCards:GC13M052986 HGNC:HGNC:20312 HPA:HPA039734 HPA:HPA043947
MIM:610903 neXtProt:NX_Q86VN1 PharmGKB:PA134990943
InParanoid:Q86VN1 PhylomeDB:Q86VN1 ChiTaRS:VPS36
EvolutionaryTrace:Q86VN1 GenomeRNAi:51028 NextBio:53573 Bgee:Q86VN1
CleanEx:HS_VPS36 Genevestigator:Q86VN1 GermOnline:ENSG00000136100
Uniprot:Q86VN1
Length = 386
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 72/202 (35%), Positives = 111/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W E P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ENMPVSQSLQTN 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 144 RGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA +++P
Sbjct: 203 --KDKQGDITEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 166 (63.5 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F +G +L+THRL++ +AI LS I I + + S
Sbjct: 27 YDGEEKIKFD---AGTLLLSTHRLIWRDQKNHECCMAILLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + P N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAPPNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
E P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KA
Sbjct: 132 ---ENMPVSQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 353 AKERLLLAEKM 363
>RGD|1309754 [details] [associations]
symbol:Vps36 "vacuolar protein sorting 36 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA;ISO]
[GO:0005768 "endosome" evidence=ISO;ISS] [GO:0005770 "late
endosome" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA;ISO]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 RGD:1309754
GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031
GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286
Pfam:PF04157 eggNOG:NOG262969 HOGENOM:HOG000006822
OrthoDB:EOG4XPQG2 HOVERGEN:HBG083632 EMBL:AABR03100673
EMBL:AABR03103040 EMBL:AABR03103985 IPI:IPI00194085
UniGene:Rn.12707 ProteinModelPortal:P0C0A2 SMR:P0C0A2 STRING:P0C0A2
PRIDE:P0C0A2 InParanoid:P0C0A2 ArrayExpress:P0C0A2
Genevestigator:P0C0A2 GermOnline:ENSRNOG00000012654 Uniprot:P0C0A2
Length = 386
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/202 (35%), Positives = 111/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W ET P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ETVPVSQSLQTK 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM +AKEMV L++ + K+
Sbjct: 144 KGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIQAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KEKQGDVTEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 179 (68.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F +G +L+THRL++ + +AIPLS I I + + S
Sbjct: 27 YDGEEKIKFD---AGTLLLSTHRLIWRDQKNNECCMAIPLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + P N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAPPNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
ET P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM +A
Sbjct: 132 ---ETVPVSQSLQTKKGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIQA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
>UNIPROTKB|P0C0A2 [details] [associations]
symbol:Vps36 "Vacuolar protein-sorting-associated protein
36" species:10116 "Rattus norvegicus" [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 RGD:1309754
GO:GO:0005634 GO:GO:0016020 GO:GO:0006355 GO:GO:0015031
GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0005764 GO:GO:0005770 GO:GO:0032266 InterPro:IPR007286
Pfam:PF04157 eggNOG:NOG262969 HOGENOM:HOG000006822
OrthoDB:EOG4XPQG2 HOVERGEN:HBG083632 EMBL:AABR03100673
EMBL:AABR03103040 EMBL:AABR03103985 IPI:IPI00194085
UniGene:Rn.12707 ProteinModelPortal:P0C0A2 SMR:P0C0A2 STRING:P0C0A2
PRIDE:P0C0A2 InParanoid:P0C0A2 ArrayExpress:P0C0A2
Genevestigator:P0C0A2 GermOnline:ENSRNOG00000012654 Uniprot:P0C0A2
Length = 386
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/202 (35%), Positives = 111/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W ET P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ETVPVSQSLQTK 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM +AKEMV L++ + K+
Sbjct: 144 KGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIQAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KEKQGDVTEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 179 (68.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F +G +L+THRL++ + +AIPLS I I + + S
Sbjct: 27 YDGEEKIKFD---AGTLLLSTHRLIWRDQKNNECCMAIPLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + P N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAPPNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
ET P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM +A
Sbjct: 132 ---ETVPVSQSLQTKKGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIQA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
>UNIPROTKB|F1RMD6 [details] [associations]
symbol:VPS36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770
GO:GO:0032266 KO:K12190 InterPro:IPR007286 Pfam:PF04157 OMA:CCIAIPL
CTD:51028 GeneTree:ENSGT00390000017209 EMBL:CU856639
RefSeq:XP_003130995.1 UniGene:Ssc.11728 Ensembl:ENSSSCT00000010273
GeneID:100513172 KEGG:ssc:100513172 Uniprot:F1RMD6
Length = 386
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 72/202 (35%), Positives = 110/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W E P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ENMPVSQSLQSN 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 144 RGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KDKQGDITEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 177 (67.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 54/194 (27%), Positives = 90/194 (46%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F +G +L+THRL++ +AIPLS I I + + S
Sbjct: 27 YDGEEKIKFD---AGTLLLSTHRLIWRDQKNHECCMAIPLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + P N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAPSNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
E P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KA
Sbjct: 132 ---ENMPVSQSLQSNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 353 AKERLLLAEKM 363
>ZFIN|ZDB-GENE-030131-7753 [details] [associations]
symbol:vps36 "vacuolar protein sorting 36 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR021648 Pfam:PF11605
PROSITE:PS51495 ZFIN:ZDB-GENE-030131-7753 GO:GO:0015031
GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0032266
KO:K12190 InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969
HOGENOM:HOG000006822 CTD:51028 OrthoDB:EOG4XPQG2 EMBL:BC045509
IPI:IPI00508769 RefSeq:NP_956271.1 UniGene:Dr.21065
ProteinModelPortal:Q7ZVK4 SMR:Q7ZVK4 STRING:Q7ZVK4 PRIDE:Q7ZVK4
GeneID:335810 KEGG:dre:335810 HOVERGEN:HBG083632 InParanoid:Q7ZVK4
NextBio:20811046 ArrayExpress:Q7ZVK4 Uniprot:Q7ZVK4
Length = 382
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 68/161 (42%), Positives = 95/161 (59%)
Query: 154 WETTP-SETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNAL 212
WE TP S+ P G R VG+ G+ RK +E + TD+++ EAF+DL+ L
Sbjct: 131 WENTPVSQPIPTGTGPKA------GRTRAVGIVGIERKLEEKRKETDKNISEAFEDLSKL 184
Query: 213 MNKAKEMVMLAEKMRQKLLAGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--A 270
M KAKEMV L+ + K+ Q + DE + K +LLS+GI +PVT+E+ +
Sbjct: 185 MEKAKEMVELSRSIANKI---KDKQGDITEDETIRFKS----YLLSMGIANPVTRETHGS 237
Query: 271 GALYHQQLSRQLADFVKIPLERAGGMINLIDVYCLFNRARG 311
G YH QL++QL D ++ PLE GGM+ L +VYCL NRARG
Sbjct: 238 GTQYHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARG 278
Score = 175 (66.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 55/184 (29%), Positives = 87/184 (47%)
Query: 48 LKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSPRFRFQVSATPD 107
L G +L+THRLL+ + IPLS + IF +++ + S + + P+
Sbjct: 35 LDVGGVVLSTHRLLWRDQKNHECCICIPLSQV--IFFEEQAA-GIGKSAKIVIHLHPAPE 91
Query: 108 NRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTP-SETGPXXX 166
N+ +PG + I + + G E + E + R WE TP S+ P
Sbjct: 92 NK----EPGPYQHSKYSYIKLSFKEHGQIEFYRRLTEEMTQKR---WENTPVSQPIPTGT 144
Query: 167 XXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKM 226
G R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L+ +
Sbjct: 145 GPKA------GRTRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMEKAKEMVELSRSI 198
Query: 227 RQKL 230
K+
Sbjct: 199 ANKI 202
Score = 39 (18.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 353 AKERLLLAEKM 363
>UNIPROTKB|F1MT69 [details] [associations]
symbol:VPS36 "Vacuolar protein-sorting-associated protein
36" species:9913 "Bos taurus" [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770 GO:GO:0032266
InterPro:IPR007286 Pfam:PF04157 OMA:CCIAIPL IPI:IPI00854407
UniGene:Bt.17824 GeneTree:ENSGT00390000017209 EMBL:DAAA02032965
Ensembl:ENSBTAT00000005646 Uniprot:F1MT69
Length = 386
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/202 (35%), Positives = 110/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W E P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ENMPVPQSLQTN 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 144 RGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KDKQGDITEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 173 (66.0 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F P G +L+THRL++ +AIPLS I I + + S
Sbjct: 27 YDGEEKIKFDP---GTLLLSTHRLIWRDQKNHECCMAIPLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAASNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
E P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KA
Sbjct: 132 ---ENMPVPQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
Score = 39 (18.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 353 AKERLLLAEKM 363
>UNIPROTKB|A5PK00 [details] [associations]
symbol:VPS36 "Vacuolar protein-sorting-associated protein
36" species:9913 "Bos taurus" [GO:0005768 "endosome" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005770 "late endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 GO:GO:0005634
GO:GO:0016020 GO:GO:0006355 GO:GO:0015031 GO:GO:0005768
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005770
GO:GO:0032266 KO:K12190 InterPro:IPR007286 Pfam:PF04157
eggNOG:NOG262969 HOGENOM:HOG000006822 EMBL:BC142301 IPI:IPI00854407
RefSeq:NP_001092409.1 UniGene:Bt.17824 ProteinModelPortal:A5PK00
SMR:A5PK00 STRING:A5PK00 GeneID:511223 KEGG:bta:511223 CTD:51028
InParanoid:A5PK00 OrthoDB:EOG4XPQG2 NextBio:20869830 Uniprot:A5PK00
Length = 386
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/202 (35%), Positives = 110/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W E P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ENMPVPQSLQTN 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 144 RGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KDKQGDITEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQAP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 173 (66.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F P G +L+THRL++ +AIPLS I I + + S
Sbjct: 27 YDGEEKIKFDP---GTLLLSTHRLIWRDQKNHECCMAIPLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPAASNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
E P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KA
Sbjct: 132 ---ENMPVPQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
>UNIPROTKB|E2QV84 [details] [associations]
symbol:VPS36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate
binding" evidence=IEA] InterPro:IPR021648 Pfam:PF11605
PROSITE:PS51495 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764
GO:GO:0005770 GO:GO:0032266 KO:K12190 InterPro:IPR007286
Pfam:PF04157 OMA:CCIAIPL CTD:51028 GeneTree:ENSGT00390000017209
EMBL:AAEX03014184 RefSeq:XP_534484.2 Ensembl:ENSCAFT00000009588
GeneID:477292 KEGG:cfa:477292 NextBio:20852810 Uniprot:E2QV84
Length = 386
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 72/202 (35%), Positives = 110/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG ++ I + + G E F ++ E R W E P
Sbjct: 92 NKEPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW-------ENMPVSQSLQTN 143
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 144 RGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKAKEMVELSKSIANKI- 202
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 203 --KDKQGDITEDETIRFKS----YLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQGP 256
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 257 LEERGGIMSLTEVYCLVNRARG 278
Score = 166 (63.5 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ + F +G +L+THRL++ +AI LS I I + + S
Sbjct: 27 YDGEEKIKFD---AGTLLLSTHRLIWRDQKNHECCMAILLSQIVFI---EEQAAGIGKSA 80
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + P N+ +PG ++ I + + G E F ++ E R W
Sbjct: 81 KIVVHLHPPPSNK----EPGPFQSSKNSYIKLSFKEHGQIE-FYRRLSEEMTQRRW---- 131
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
E P G +R VG+ G+ RK +E + TD+++ EAF+DL+ LM KA
Sbjct: 132 ---ENMPVSQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKA 188
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 189 KEMVELSKSIANKI 202
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 353 AKERLLLAEKM 363
>UNIPROTKB|Q6DDF4 [details] [associations]
symbol:vps36 "Vacuolar protein-sorting-associated protein
36" species:8355 "Xenopus laevis" [GO:0005768 "endosome"
evidence=ISS] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
GO:GO:0015031 GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0032266 KO:K12190 InterPro:IPR007286 Pfam:PF04157 CTD:51028
HOVERGEN:HBG083632 EMBL:BC077615 RefSeq:NP_001086892.1
UniGene:Xl.48240 ProteinModelPortal:Q6DDF4 SMR:Q6DDF4 PRIDE:Q6DDF4
GeneID:446727 KEGG:xla:446727 Xenbase:XB-GENE-6255362
Uniprot:Q6DDF4
Length = 388
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 72/202 (35%), Positives = 111/202 (54%)
Query: 112 DSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXX 171
+ +PG R + + R G E F ++ E R W E + P
Sbjct: 92 NKEPGPYQTSRYSYVKLSFREHGQIE-FQRRLAEELTQRRW--ERLSASASPSMQMNKGP 148
Query: 172 XXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLL 231
G ++ VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 149 QT---GRIKAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMEKAKEMVELSKSIATKI- 204
Query: 232 AGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIP 289
Q + + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ P
Sbjct: 205 --KDKQGDISEDETIRFKS----YLLSMGIANPVTRETHGSGTHYHMQLAKQLATMLQAP 258
Query: 290 LERAGGMINLIDVYCLFNRARG 311
LE GG+++L +VYCL NRARG
Sbjct: 259 LEERGGIMSLTEVYCLVNRARG 280
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 58/201 (28%), Positives = 95/201 (47%)
Query: 50 SGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSPRFRFQVS-ATPDN 108
SG +LTTHRL++ +A PLS I +F+ +++ + S + + ATP+
Sbjct: 37 SGTLLLTTHRLIWRDQKNHDFCIAFPLSQI--VFTEEQA-GGIGKSAKIVVHLHPATPNK 93
Query: 109 RIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXX 168
+PG R + + R G E F ++ E R W E + P
Sbjct: 94 -----EPGPYQTSRYSYVKLSFREHGQIE-FQRRLAEELTQRRW--ERLSASASPSMQMN 145
Query: 169 XXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQ 228
G ++ VG+ G+ RK +E + TD+++ EAF+DL+ LM KAKEMV L++ +
Sbjct: 146 KGPQT---GRIKAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMEKAKEMVELSKSIAT 202
Query: 229 KLLAGSSSQSNSANDEELGSK 249
K+ Q + + DE + K
Sbjct: 203 KI---KDKQGDISEDETIRFK 220
>UNIPROTKB|F1P5B8 [details] [associations]
symbol:VPS36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005764 GO:GO:0005770
GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157 OMA:CCIAIPL
GeneTree:ENSGT00390000017209 EMBL:AADN02005348 IPI:IPI00596004
Ensembl:ENSGALT00000027510 Uniprot:F1P5B8
Length = 380
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 60/137 (43%), Positives = 90/137 (65%)
Query: 177 GSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSSS 236
G +R VG+ G+ RK + + TD+++ EAF+DL+ LM KAKEMV L++ + K+
Sbjct: 143 GRIRAVGIVGIERKLEAKRKETDKNISEAFEDLSKLMEKAKEMVELSKSIANKI---KEK 199
Query: 237 QSNSANDEELGSKEEMQDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIPLERAG 294
Q + DE + K +LLS+GI +PVT+E+ +G YH QL++QLA ++ PLE G
Sbjct: 200 QGDITEDETIRFKS----YLLSMGIANPVTRETHGSGTHYHMQLAKQLAGMLQTPLEERG 255
Query: 295 GMINLIDVYCLFNRARG 311
G+++L +VYCL NRARG
Sbjct: 256 GIMSLTEVYCLVNRARG 272
Score = 164 (62.8 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 54/194 (27%), Positives = 88/194 (45%)
Query: 37 HDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAVAIPLSAITHIFSSKRSLKSVFHSP 96
+D ++ V F SG +L+THRL++ +AIPLS + I + + S
Sbjct: 21 YDGEEKVKFD---SGVLLLSTHRLIWRDQKNHECCIAIPLSQVVFI---EEQAAGIGKSA 74
Query: 97 RFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWET 156
+ + N+ +PG + I + + G E F E + R WE
Sbjct: 75 KIVAHLHPASPNK----EPGPFQSSKYSYIKLSFKEHGQIEFFRRFSEEITQRR---WEN 127
Query: 157 TPSETGPXXXXXXXXXXXXDGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKA 216
P+ G G +R VG+ G+ RK + + TD+++ EAF+DL+ LM KA
Sbjct: 128 MPA--GQTIQVNKDPQA---GRIRAVGIVGIERKLEAKRKETDKNISEAFEDLSKLMEKA 182
Query: 217 KEMVMLAEKMRQKL 230
KEMV L++ + K+
Sbjct: 183 KEMVELSKSIANKI 196
Score = 39 (18.8 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 216 AKEMVMLAEKM 226
AKE ++LAEKM
Sbjct: 347 AKERLLLAEKM 357
>DICTYBASE|DDB_G0282045 [details] [associations]
symbol:vps36 "vacuolar protein sorting 36"
species:44689 "Dictyostelium discoideum" [GO:0000814 "ESCRT II
complex" evidence=ISS] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0032266 "phosphatidylinositol-3-phosphate
binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006605 "protein targeting" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
dictyBase:DDB_G0282045 GO:GO:0006605 GenomeReviews:CM000152_GR
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AAFI02000044
GO:GO:0032266 KO:K12190 InterPro:IPR007286 Pfam:PF04157
GO:GO:0000814 eggNOG:NOG262969 RefSeq:XP_640433.1
ProteinModelPortal:Q54T18 EnsemblProtists:DDB0234028 GeneID:8623388
KEGG:ddi:DDB_G0282045 InParanoid:Q54T18 OMA:ACLLFES Uniprot:Q54T18
Length = 611
Score = 253 (94.1 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 60/143 (41%), Positives = 88/143 (61%)
Query: 176 DGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSS 235
+G G+GG++ + + D+ L E+F DLN LM KAK+MV L+EK++ L
Sbjct: 365 NGFTSNAGIGGIINQMNKKTLENDKLLSESFSDLNILMEKAKDMVTLSEKLKVTL---EK 421
Query: 236 SQSNSANDEELGSKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFV--KIPLERA 293
S + EE +EE + +LL +GI SPVTK++A + YH QLS+QL+D++ K L++
Sbjct: 422 KTGTSTSTEE---EEEFRSFLLEMGIESPVTKKTAKSKYHDQLSKQLSDWIITKNILKQH 478
Query: 294 GG-----MINLIDVYCLFNRARG 311
G MI L D+YC+FNRARG
Sbjct: 479 KGSGNNEMITLSDLYCIFNRARG 501
Score = 53 (23.7 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 15 SGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLFLSSSCSSTAV-- 72
+G P L+ NE + NV I +D D + +G +L+THR+++++ +
Sbjct: 12 NGEPELIQNESIIYKVDNVSI-YDGDQKTQY---SNGTVMLSTHRVIWVNKDIGLGLLHQ 67
Query: 73 -AIPLSAITH----IFSS--------KRSLKSVFHSPR 97
+ + A+T I SS KRS + FH+ R
Sbjct: 68 LILNIEALTTGLMGIGSSPKILITLTKRSFRLSFHAGR 105
>FB|FBgn0086785 [details] [associations]
symbol:Vps36 "Vacuolar protein sorting 36" species:7227
"Drosophila melanogaster" [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0008593 "regulation of Notch signaling pathway"
evidence=IEP] InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
EMBL:AE014296 GO:GO:0042981 GO:GO:0015031 GO:GO:0008283
GO:GO:0005768 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003730
GO:GO:0051028 GO:GO:0032266 GO:GO:0008593 KO:K12190
InterPro:IPR007286 Pfam:PF04157 eggNOG:NOG262969 OMA:CCIAIPL
CTD:51028 EMBL:AY118941 EMBL:BT044237 RefSeq:NP_648660.1
UniGene:Dm.7252 ProteinModelPortal:Q9VU87 SMR:Q9VU87
MINT:MINT-833367 STRING:Q9VU87 PaxDb:Q9VU87
EnsemblMetazoa:FBtr0075818 GeneID:39523 KEGG:dme:Dmel_CG10711
UCSC:CG10711-RA FlyBase:FBgn0086785 GeneTree:ENSGT00390000017209
InParanoid:Q9VU87 OrthoDB:EOG46HDS5 PhylomeDB:Q9VU87
GenomeRNAi:39523 NextBio:814096 Bgee:Q9VU87 Uniprot:Q9VU87
Length = 399
Score = 259 (96.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 88/301 (29%), Positives = 140/301 (46%)
Query: 20 LVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLF-LSSSCSSTAVAI--PL 76
L PNE + + V I +D D F + G +LTTHRL + + AV + PL
Sbjct: 11 LSPNESFVSRDNRVKI-YDGDQKTDF---EDGEVVLTTHRLFWGRPGEIARAAVTLCLPL 66
Query: 77 SAITHIFSSKRSLKSVFHSPRFRFQVSATPDNRIFDSDPGRVTGLRSVVITVVVRGKGDW 136
S + + S+ + S F + R + P D PG + R+ I + GK
Sbjct: 67 SYVISV--SEETTASNFFGRKTRIIMHLHPPTS--DKGPGPLDTSRATHIKL--SGKNGL 120
Query: 137 EL-FLSKMWECWRGRAWAWETTPSETGPXXXXXXXXXXXXDGSVRM---VGVGGLLRKEQ 192
+ F S + E R W T D R+ G+GG+ R +
Sbjct: 121 SVEFHSALRETLNARVWEILLTSEIIINGVASSPTLEPANDRLARIQKRTGIGGIERHLE 180
Query: 193 EMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSSSQSNSANDEELGSKEEM 252
++TD ++ AFQDL+ LM AK+MV +++ + K+ Q +D+E
Sbjct: 181 AKAKATDENIALAFQDLSVLMAMAKDMVGVSKTISSKI----RKQKGEISDDET---VRF 233
Query: 253 QDWLLSVGIVSPVTKES--AGALYHQQLSRQLADFVKIPLERAGGMINLIDVYCLFNRAR 310
+ +L+S+GI PVT+++ + + Y L+RQ+ + + P+E GGM++L DVYC NRAR
Sbjct: 234 KSYLMSLGIDDPVTRDNFTSNSAYFSSLARQICEMLLDPIEEQGGMMSLADVYCRVNRAR 293
Query: 311 G 311
G
Sbjct: 294 G 294
>WB|WBGene00008919 [details] [associations]
symbol:vps-36 species:6239 "Caenorhabditis elegans"
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 GO:GO:0008340
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0032266
EMBL:Z72507 KO:K12190 InterPro:IPR007286 Pfam:PF04157
eggNOG:NOG262969 HOGENOM:HOG000006822 OMA:CCIAIPL
GeneTree:ENSGT00390000017209 PIR:T21060 RefSeq:NP_505798.2
ProteinModelPortal:Q19519 SMR:Q19519 DIP:DIP-27380N
MINT:MINT-1064582 STRING:Q19519 PaxDb:Q19519
EnsemblMetazoa:F17C11.8.1 EnsemblMetazoa:F17C11.8.2 GeneID:179520
KEGG:cel:CELE_F17C11.8 UCSC:F17C11.8.1 CTD:179520 WormBase:F17C11.8
InParanoid:Q19519 NextBio:905760 Uniprot:Q19519
Length = 383
Score = 201 (75.8 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 56/199 (28%), Positives = 101/199 (50%)
Query: 116 GRVTGLRSVVITVVVRGKGDWELFLSKMWECWRGRAWAWETTPSETGPXXXXXXXXXXXX 175
G V + +V R G+ + F K + R + W ++ S +
Sbjct: 96 GPVNSSHYETLRLVFRHGGEDDFF-KKYEDAVRRKTWQRSSSGSSSS---------GSRA 145
Query: 176 DGSVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSS 235
++R VG+ G+ R+ E + T ++ +AF D++ LM A+EMV L++ + +K+ S
Sbjct: 146 SSNLRSVGISGIERRLAENHQKTHETITQAFDDMSKLMETAREMVALSKSISEKV---RS 202
Query: 236 SQSNSANDEELGSKEEMQDWLLSVGIVSPVTKES---AGALYHQQLSRQLADFVKIPLER 292
+ + DE + K +LLS+G+ PVTK + + + Y Q+L+++++D + ++
Sbjct: 203 RKGEISEDETIAFKS----YLLSLGVSDPVTKSTFVGSDSEYFQKLAKEISDVLYEHIKE 258
Query: 293 AGGMINLIDVYCLFNRARG 311
GGM L +VYC NRARG
Sbjct: 259 NGGMCALPEVYCRINRARG 277
>ASPGD|ASPL0000063501 [details] [associations]
symbol:vps36 species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0000814 "ESCRT II
complex" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000433
"negative regulation of transcription from RNA polymerase II
promoter by glucose" evidence=IEA] InterPro:IPR001876
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 SMART:SM00547
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:BN001304 GO:GO:0032266 InterPro:IPR007286 Pfam:PF04157
OMA:CTFINHP EnsemblFungi:CADANIAT00000435 Uniprot:C8VB67
Length = 621
Score = 180 (68.4 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 158 PSETGPXXX-XXXXXXXXXDGSVRMVGVG--GLLRKEQEMWESTDRSLQEAFQDLNALMN 214
PS++ P D R GVG GL R+ E ++ + + AF+DL ALM
Sbjct: 325 PSQSTPTSAPDQTGLSTSVDTQARSPGVGIAGLERRGLEARKNNELVIGNAFEDLEALMA 384
Query: 215 KAKEMVMLAEKMRQKLLAGSSSQSNSANDEELGSKEEMQDWLLSVGIVSPVTKESAGALY 274
AK++V LAE + ++ +G +S +SA + S+ L + + SAG LY
Sbjct: 385 SAKQIVALAETLARE--SGMASDESSAETSAVLSESAAA---LGMITTKDMLGSSAGNLY 439
Query: 275 HQQLSRQLADFV----KIPLERAGGMINLIDVYCLFNRARGTV 313
+LSR LA+++ K L+R GG+++LID++ +FNR+R V
Sbjct: 440 LSELSRTLAEYLTDDRKGVLQREGGIMSLIDLWAVFNRSRNGV 482
Score = 66 (28.3 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 6 FFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLFLS 64
FF +T++ RP+L+P+E LL D D + GH LT+HR+ +++
Sbjct: 2 FFKALELTTALRPLLLPDET---LLFVQDAVGLYDGKYKIANYQDGHAYLTSHRVCYVA 57
>UNIPROTKB|G4MUW2 [details] [associations]
symbol:MGG_01704 "Vacuolar protein-sorting-associated
protein 36" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001876
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 SMART:SM00547
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CM001232 GO:GO:0032266 KO:K12190 InterPro:IPR007286
Pfam:PF04157 RefSeq:XP_003714699.1 EnsemblFungi:MGG_01704T0
GeneID:2679344 KEGG:mgr:MGG_01704 Uniprot:G4MUW2
Length = 647
Score = 176 (67.0 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 50/145 (34%), Positives = 85/145 (58%)
Query: 179 VRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKM-RQKLLAGSSSQ 237
V+ G+ GL ++ ++ ++ + + AF+DL ALM AK++V LAE RQ G+SS+
Sbjct: 362 VKTAGIAGLEKRGIDLRKNNELVIGSAFEDLEALMASAKDIVALAESFARQANSGGASSE 421
Query: 238 SNSANDEELGSKEEMQDWLLSVGIVSPVTKESAG-----ALYHQQLSRQLADFV----KI 288
+N+ E +G+V+ TK++ G +LY +L+R LA+F+ +
Sbjct: 422 ANAILAESA----------TQLGLVT--TKDTVGGSSSESLYISELARNLAEFLTDDARG 469
Query: 289 PLERAGGMINLIDVYCLFNRARGTV 313
L +AGG+I+L+D++ +FNRARG V
Sbjct: 470 VLRKAGGIISLVDLWAMFNRARGGV 494
Score = 61 (26.5 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 6 FFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLFLSS 65
F +T++ RP +P+EV L NV + + P ++G LT+HR+ ++
Sbjct: 2 FLKQIDLTTALRPSYLPDEVLLCLQDNVGL---YEGKYKLPNQQNGQVYLTSHRVCYVDK 58
Query: 66 S 66
+
Sbjct: 59 N 59
>CGD|CAL0002025 [details] [associations]
symbol:VPS36 species:5476 "Candida albicans" [GO:0016485
"protein processing" evidence=IGI] [GO:0006623 "protein targeting
to vacuole" evidence=ISS;IMP] [GO:0000814 "ESCRT II complex"
evidence=ISS] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0071285 "cellular
response to lithium ion" evidence=IMP] [GO:0071467 "cellular
response to pH" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=IEA]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000433
"negative regulation of transcription from RNA polymerase II
promoter by glucose" evidence=IEA] InterPro:IPR001876
InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495 SMART:SM00547
CGD:CAL0002025 GO:GO:0036178 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0071469 GO:GO:0016485 GO:GO:0006623
GO:GO:0032266 GO:GO:0071285 EMBL:AACQ01000019 KO:K12190
InterPro:IPR007286 Pfam:PF04157 GO:GO:0000814 eggNOG:NOG293397
RefSeq:XP_720919.1 ProteinModelPortal:Q5AHK1 STRING:Q5AHK1
GeneID:3637354 KEGG:cal:CaO19.795 Uniprot:Q5AHK1
Length = 665
Score = 84 (34.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 5 NFFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLFLS 64
N + P + S RP+L NE + NV + + ++ ++G LT RL++
Sbjct: 7 NIWNPVLINRSNRPILQENEYNIYIRDNVGLYQGRQKIINH---QNGRVYLTNKRLIYFD 63
Query: 65 SSCSSTAVAIPLSAITHIFSSKRSLKSVFH-SPRFRFQVSA--TPDNRIFDSDPGRVT 119
++ SS ++A+ L +F + + F SP+ + + I +D G T
Sbjct: 64 NNDSSRSIAVELK----LFKNAELVAGYFRRSPKVTLYIKTENSDTTNIGGNDSGSNT 117
Score = 79 (32.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 260 GIVSPVTK-ESAGALYHQQLSRQLADF-VKIPLERAGGMINLIDVYCLFNR 308
G+V P + + LYHQ+LSR +++F + L + MI+ D++ +NR
Sbjct: 384 GVVIPALSIKKSSPLYHQELSRHISEFSINFKLTQKTSMISSQDLFAEYNR 434
>UNIPROTKB|Q5AHK1 [details] [associations]
symbol:VPS36 "Putative uncharacterized protein VPS36"
species:237561 "Candida albicans SC5314" [GO:0000814 "ESCRT II
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=ISS;IMP] [GO:0016485 "protein processing" evidence=IGI]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036178 "filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
InterPro:IPR001876 InterPro:IPR021648 Pfam:PF11605 PROSITE:PS51495
SMART:SM00547 CGD:CAL0002025 GO:GO:0036178 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0071469 GO:GO:0016485
GO:GO:0006623 GO:GO:0032266 GO:GO:0071285 EMBL:AACQ01000019
KO:K12190 InterPro:IPR007286 Pfam:PF04157 GO:GO:0000814
eggNOG:NOG293397 RefSeq:XP_720919.1 ProteinModelPortal:Q5AHK1
STRING:Q5AHK1 GeneID:3637354 KEGG:cal:CaO19.795 Uniprot:Q5AHK1
Length = 665
Score = 84 (34.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 5 NFFLPASVTSSGRPVLVPNEVECNLLSNVDIEHDQDDAVSFPPLKSGHFILTTHRLLFLS 64
N + P + S RP+L NE + NV + + ++ ++G LT RL++
Sbjct: 7 NIWNPVLINRSNRPILQENEYNIYIRDNVGLYQGRQKIINH---QNGRVYLTNKRLIYFD 63
Query: 65 SSCSSTAVAIPLSAITHIFSSKRSLKSVFH-SPRFRFQVSA--TPDNRIFDSDPGRVT 119
++ SS ++A+ L +F + + F SP+ + + I +D G T
Sbjct: 64 NNDSSRSIAVELK----LFKNAELVAGYFRRSPKVTLYIKTENSDTTNIGGNDSGSNT 117
Score = 79 (32.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 260 GIVSPVTK-ESAGALYHQQLSRQLADF-VKIPLERAGGMINLIDVYCLFNR 308
G+V P + + LYHQ+LSR +++F + L + MI+ D++ +NR
Sbjct: 384 GVVIPALSIKKSSPLYHQELSRHISEFSINFKLTQKTSMISSQDLFAEYNR 434
>POMBASE|SPBC3B9.09 [details] [associations]
symbol:vps36 "ESCRT II complex subunit Vps36"
species:4896 "Schizosaccharomyces pombe" [GO:0000814 "ESCRT II
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR001876 InterPro:IPR021648 Pfam:PF11605 PROSITE:PS01358
PROSITE:PS50199 PROSITE:PS51495 SMART:SM00547 PomBase:SPBC3B9.09
GO:GO:0005794 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0032266 GO:GO:0043328 GO:GO:0006900 GO:GO:0045053 KO:K12190
InterPro:IPR007286 Pfam:PF04157 GO:GO:0000814 eggNOG:NOG262969
PIR:T40348 RefSeq:NP_596667.1 HSSP:Q06696 ProteinModelPortal:O43038
STRING:O43038 EnsemblFungi:SPBC3B9.09.1 GeneID:2540981
KEGG:spo:SPBC3B9.09 OrthoDB:EOG4T4H46 NextBio:20802096
Uniprot:O43038
Length = 467
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 32/133 (24%), Positives = 66/133 (49%)
Query: 178 SVRMVGVGGLLRKEQEMWESTDRSLQEAFQDLNALMNKAKEMVMLAEKMRQKLLAGSSSQ 237
S+RM G+ L + + R+L AFQDL+A + AK+ + LA++ +K+ G +
Sbjct: 216 SLRMGGIHDLEQSHEMQLAKNGRTLVHAFQDLDAFFSLAKDTMSLADQFAEKM-DGLTGT 274
Query: 238 SNSANDEELGSKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERAGGMI 297
S ++L +K Q +L + V + LY +L + +++ ++ L+ +
Sbjct: 275 QQSDKVQQLLNKSN-QLGVLRGNHLDNVPVSANSRLYDIELCKSISEVLRTRLKADTDTV 333
Query: 298 NLIDVYCLFNRAR 310
+ + ++NR+R
Sbjct: 334 TMTQAWAIYNRSR 346
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 302 0.00097 115 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 609 (65 KB)
Total size of DFA: 220 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.09u 0.11s 25.20t Elapsed: 00:00:01
Total cpu time: 25.09u 0.11s 25.20t Elapsed: 00:00:01
Start: Sat May 11 12:26:32 2013 End: Sat May 11 12:26:33 2013