Your job contains 1 sequence.
>021305
MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW
ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS
GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI
FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
VHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYA
LPVDVVNRIFFSKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021305
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2177058 - symbol:RGTB1 "RAB geranylgeranyl tra... 1441 1.5e-147 1
TAIR|locus:2088614 - symbol:RGTB2 "RAB geranylgeranyl tra... 1386 9.9e-142 1
ZFIN|ZDB-GENE-040426-2116 - symbol:rabggtb "Rab geranylge... 1067 6.3e-108 1
UNIPROTKB|P53611 - symbol:RABGGTB "Geranylgeranyl transfe... 1061 2.7e-107 1
UNIPROTKB|F1P6X0 - symbol:RABGGTB "Uncharacterized protei... 1054 1.5e-106 1
UNIPROTKB|G8JKY6 - symbol:RABGGTB "Geranylgeranyl transfe... 1053 1.9e-106 1
UNIPROTKB|Q5E9B3 - symbol:RABGGTB "Geranylgeranyl transfe... 1053 1.9e-106 1
UNIPROTKB|F1LSM6 - symbol:Rabggtb "Geranylgeranyl transfe... 1052 2.5e-106 1
MGI|MGI:99537 - symbol:Rabggtb "RAB geranylgeranyl transf... 1049 5.1e-106 1
RGD|3530 - symbol:Rabggtb "Rab geranylgeranyltransferase,... 1048 6.5e-106 1
UNIPROTKB|F1M052 - symbol:Rabggtb "Geranylgeranyl transfe... 1044 1.7e-105 1
UNIPROTKB|F1P4E5 - symbol:RABGGTB "Uncharacterized protei... 1023 2.9e-103 1
DICTYBASE|DDB_G0290671 - symbol:rabggtb "protein geranylg... 1018 9.8e-103 1
FB|FBgn0028970 - symbol:betaggt-II "beta subunit of type ... 923 1.1e-92 1
ASPGD|ASPL0000011885 - symbol:AN3747 species:162425 "Emer... 917 5.0e-92 1
UNIPROTKB|G4MQQ5 - symbol:MGG_09304 "Type-2 protein geran... 914 1.0e-91 1
SGD|S000006380 - symbol:BET2 "Beta subunit of Type II ger... 891 2.8e-89 1
POMBASE|SPAC167.02 - symbol:ptb1 "geranylgeranyltransfera... 884 1.6e-88 1
WB|WBGene00015099 - symbol:ggtb-1 species:6239 "Caenorhab... 841 5.6e-84 1
CGD|CAL0000126 - symbol:BET2 species:5476 "Candida albica... 662 5.2e-65 1
UNIPROTKB|D3DQ78 - symbol:RABGGTB "Geranylgeranyl transfe... 568 4.8e-55 1
GENEDB_PFALCIPARUM|PFF0120w - symbol:PFF0120w "putative g... 510 6.7e-49 1
POMBASE|SPAC17G6.04c - symbol:cpp1 "protein farnesyltrans... 426 5.3e-40 1
DICTYBASE|DDB_G0270948 - symbol:fntB "protein farnesyltra... 304 1.8e-38 3
TAIR|locus:2039752 - symbol:PGGT-I species:3702 "Arabidop... 359 3.5e-38 2
UNIPROTKB|F1NE58 - symbol:PGGT1B "Uncharacterized protein... 327 3.5e-36 2
RGD|621754 - symbol:Pggt1b "protein geranylgeranyltransfe... 314 7.2e-36 2
UNIPROTKB|P53610 - symbol:Pggt1b "Geranylgeranyl transfer... 314 7.2e-36 2
UNIPROTKB|Q5T4U8 - symbol:RABGGTB "Geranylgeranyl transfe... 387 7.2e-36 1
ZFIN|ZDB-GENE-050913-85 - symbol:pggt1b "protein geranylg... 320 9.2e-36 2
MGI|MGI:1917514 - symbol:Pggt1b "protein geranylgeranyltr... 313 9.2e-36 2
UNIPROTKB|Q5EAD5 - symbol:PGGT1B "Geranylgeranyl transfer... 310 1.9e-35 2
UNIPROTKB|B4DL54 - symbol:CHURC1-FNTB "cDNA FLJ59570, hig... 383 1.9e-35 1
UNIPROTKB|B4E1A0 - symbol:CHURC1-FNTB "cDNA FLJ58825, hig... 383 1.9e-35 1
UNIPROTKB|H0YHI0 - symbol:CHURC1-FNTB "Protein CHURC1-FNT... 383 1.9e-35 1
UNIPROTKB|P49356 - symbol:FNTB "Protein farnesyltransfera... 383 1.9e-35 1
UNIPROTKB|P53609 - symbol:PGGT1B "Geranylgeranyl transfer... 309 2.4e-35 2
TAIR|locus:2173802 - symbol:ERA1 "ENHANCED RESPONSE TO AB... 314 5.3e-35 2
ZFIN|ZDB-GENE-030131-2220 - symbol:fntb "farnesyltransfer... 378 6.5e-35 1
MGI|MGI:1861305 - symbol:Fntb "farnesyltransferase, CAAX ... 377 8.3e-35 1
RGD|620119 - symbol:Fntb "farnesyltransferase, CAAX box, ... 377 8.3e-35 1
UNIPROTKB|Q02293 - symbol:Fntb "Protein farnesyltransfera... 377 8.3e-35 1
UNIPROTKB|E2QZU5 - symbol:PGGT1B "Uncharacterized protein... 303 1.0e-34 2
UNIPROTKB|F1Q0W7 - symbol:FNTB "Uncharacterized protein" ... 376 1.1e-34 1
UNIPROTKB|F1S9R0 - symbol:RABGGTB "Uncharacterized protei... 372 2.8e-34 1
UNIPROTKB|P49355 - symbol:FNTB "Protein farnesyltransfera... 370 4.6e-34 1
UNIPROTKB|F1RLE8 - symbol:PGGT1B "Uncharacterized protein... 310 1.1e-31 2
DICTYBASE|DDB_G0269726 - symbol:pggt1b "protein geranylge... 304 1.4e-31 2
SGD|S000002248 - symbol:RAM1 "Beta subunit of the CAAX fa... 317 2.3e-31 2
WB|WBGene00006465 - symbol:fntb-1 species:6239 "Caenorhab... 344 2.6e-31 1
UNIPROTKB|Q19752 - symbol:fntb-1 "Protein FNTB-1" species... 344 2.6e-31 1
FB|FBgn0015000 - symbol:betaggt-I "beta subunit of type I... 317 3.0e-31 2
UNIPROTKB|F1SA56 - symbol:CHURC1-FNTB "Uncharacterized pr... 340 6.9e-31 1
UNIPROTKB|F1N4H5 - symbol:PGGT1B "Geranylgeranyl transfer... 263 1.6e-30 2
FB|FBgn0038424 - symbol:CG17565 species:7227 "Drosophila ... 331 6.2e-30 1
GENEDB_PFALCIPARUM|PF11_0483 - symbol:PF11_0483 "farnesyl... 271 7.7e-29 2
UNIPROTKB|Q8IHP6 - symbol:PF11_0483 "Farnesyltransferase ... 271 7.7e-29 2
UNIPROTKB|O18197 - symbol:Y48E1B.3 "Protein Y48E1B.3, iso... 311 8.2e-28 1
WB|WBGene00013002 - symbol:Y48E1B.3 species:6239 "Caenorh... 311 1.1e-26 1
ASPGD|ASPL0000050108 - symbol:AN2002 species:162425 "Emer... 239 5.5e-24 2
POMBASE|SPAC2E1P5.04c - symbol:cwg2 "geranylgeranyltransf... 171 6.1e-19 2
SGD|S000003123 - symbol:CDC43 "Beta subunit of geranylger... 129 5.1e-14 2
CGD|CAL0001670 - symbol:RAM1 species:5476 "Candida albica... 150 3.7e-13 2
UNIPROTKB|Q59LD0 - symbol:RAM1 "Putative uncharacterized ... 150 3.7e-13 2
ASPGD|ASPL0000027483 - symbol:AN5760 species:162425 "Emer... 137 4.3e-13 3
CGD|CAL0001576 - symbol:CDC43 species:5476 "Candida albic... 152 1.4e-12 2
UNIPROTKB|Q59KC5 - symbol:CDC43 "Putative uncharacterized... 152 1.4e-12 2
UNIPROTKB|B3KSC2 - symbol:CHURC1-FNTB "cDNA FLJ35979 fis,... 170 1.8e-12 1
>TAIR|locus:2177058 [details] [associations]
symbol:RGTB1 "RAB geranylgeranyl transferase beta subunit
1" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 HSSP:Q08603
EMBL:BT004816 EMBL:BT004818 EMBL:AK227802 IPI:IPI00534125
RefSeq:NP_568259.1 UniGene:At.46789 ProteinModelPortal:Q84J75
STRING:Q84J75 PaxDb:Q84J75 PRIDE:Q84J75 EnsemblPlants:AT5G12210.1
GeneID:831094 KEGG:ath:AT5G12210 TAIR:At5g12210 InParanoid:Q84J75
OMA:ADSICEY PhylomeDB:Q84J75 ProtClustDB:PLN03201
Genevestigator:Q84J75 Uniprot:Q84J75
Length = 321
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 258/313 (82%), Positives = 290/313 (92%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
M +L ADKHV+YI+ EKKK+SFESVVM+HLR+NGAYWGLTTLD+L KL V EE+VISW
Sbjct: 9 MVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISW 68
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++ CQ ESGGFAGN GHDPH+LYTLSAVQ+LALFDK++ILD KVS+Y+ LQNEDGSFS
Sbjct: 69 LMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFS 128
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GD+WGE+DTRFSYIAICCLSIL+ LDKINV+KAV+YIVSCKNLDGGFGCTPG ESH+GQI
Sbjct: 129 GDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQI 188
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI G+LHHVDKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWVLSSLIMIDR
Sbjct: 189 FCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDR 248
Query: 241 VHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
VHWI+K KLVKFILDCQD++NGGISDRP+DAVD+FHTYFGVAGLSLLEYPG+K IDPAYA
Sbjct: 249 VHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYA 308
Query: 301 LPVDVVNRIFFSK 313
LPVDVVNRI F+K
Sbjct: 309 LPVDVVNRIIFTK 321
>TAIR|locus:2088614 [details] [associations]
symbol:RGTB2 "RAB geranylgeranyl transferase beta subunit
2" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002686 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AP002040
EMBL:AC069473 EMBL:AP002063 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 OMA:ERQDYES HSSP:Q08603 ProtClustDB:PLN03201
EMBL:BT028896 IPI:IPI00545274 RefSeq:NP_187814.1 RefSeq:NP_850567.1
UniGene:At.39649 ProteinModelPortal:Q9LHL5 SMR:Q9LHL5
EnsemblPlants:AT3G12070.1 EnsemblPlants:AT3G12070.2 GeneID:820381
KEGG:ath:AT3G12070 TAIR:At3g12070 InParanoid:Q9LHL5
PhylomeDB:Q9LHL5 Genevestigator:Q9LHL5 Uniprot:Q9LHL5
Length = 317
Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 254/314 (80%), Positives = 284/314 (90%)
Query: 3 ELAADKHVKYIISV--EKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+L A KH++YI+++ EKKK+SFESVVM+HLR+NGAYWGLTTL +L KL +V E++V+SW
Sbjct: 4 KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++ CQ ESGGFAGN GHDPHVLYTLSAVQ+LALFDK++ILD +KVSNYI GLQNEDGSFS
Sbjct: 64 VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GDIWGEVDTRFSYIAICCLSIL+ LDKINV KAV+YIVSCKNLDGGFGC+PG ESH+GQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMID 239
FCCVGALAI G LH VDKDLLGWWLCERQ +SGGLNGRPEKLPDVCYSWWVLSSLIMID
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMID 243
Query: 240 RVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAY 299
RVHWI K KLVKFILD QDM+NGGISDRP VD+FHTYFGVAGLSLLEYPG+K IDPAY
Sbjct: 244 RVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAY 303
Query: 300 ALPVDVVNRIFFSK 313
ALPV V+NRI F+K
Sbjct: 304 ALPVHVINRILFTK 317
Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/241 (19%), Positives = 113/241 (46%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+G ++ D+ V ++++ + + F + + L + KL+ +D E V ++
Sbjct: 52 LGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNY 111
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
I Q+E G F+G+I + ++ A+ L++ +D ++ K +YIV +N DG F
Sbjct: 112 IAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFG 171
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQ 179
E + + L+I L +++ D ++ ++ + GG P
Sbjct: 172 CSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCY 231
Query: 180 IFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMI 238
+ + +L + +H ++K L ++ + Q + +GG++ RP D+ ++++ ++ L ++
Sbjct: 232 SWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLL 291
Query: 239 D 239
+
Sbjct: 292 E 292
>ZFIN|ZDB-GENE-040426-2116 [details] [associations]
symbol:rabggtb "Rab geranylgeranyltransferase,
beta subunit" species:7955 "Danio rerio" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
ZFIN:ZDB-GENE-040426-2116 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:CT027702
EMBL:BC097066 IPI:IPI00613192 RefSeq:NP_998277.2 UniGene:Dr.79075
SMR:Q4V946 STRING:Q4V946 Ensembl:ENSDART00000099248 GeneID:406386
KEGG:dre:406386 InParanoid:Q4V946 NextBio:20817996 Uniprot:Q4V946
Length = 331
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 184/306 (60%), Positives = 237/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L DKH YI + KKD +E + E+LR++G YWGLT +D++G+L ++ E++I +I
Sbjct: 18 LFLDKHADYIAAYGSKKDDYEYTLSEYLRMSGIYWGLTVMDLMGQLSRMNREEIIEFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ + GG + +IGHDPH+LYTLSA+Q+L+L+D V+ +D DKV Y+ GLQ EDGSF+GD
Sbjct: 78 CQHDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDK 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INVDKAVE+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G L++ G LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLSVTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+K KL FIL CQD E GG +DRP D VD FHT FGVAGLSLL +KP++P + +P
Sbjct: 258 IDKAKLRNFILACQDEETGGFADRPGDMVDPFHTLFGVAGLSLLGDEQIKPVNPVFCMPE 317
Query: 304 DVVNRI 309
DV+ RI
Sbjct: 318 DVLQRI 323
Score = 145 (56.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/174 (21%), Positives = 85/174 (48%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
D + L DK ++YI ++ + + + Y + + ++ +L ++N ++ +
Sbjct: 13 DAPNTLFLDKHADYIAAYGSKKDDYEYTLSEYLRMSGIYWGLTVMDLMGQLSRMNREEII 72
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGG 214
E+I SC++ GG + G + H + L++ +++ +D D + ++ Q + G
Sbjct: 73 EFIKSCQHDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAIDVDKVVEYVKGLQQEDGS 132
Query: 215 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
G D +S+ +++L ++ ++ IN DK V+F++ C + + GG RP
Sbjct: 133 FAGDKWGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFD-GGFGCRP 185
>UNIPROTKB|P53611 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=NAS] [GO:0007601 "visual perception" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0007601 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 CTD:5876 HOVERGEN:HBG008182
OrthoDB:EOG4V6ZGV EMBL:U49245 EMBL:X98001 EMBL:Y08201 EMBL:BC020790
IPI:IPI00295849 PIR:G02431 RefSeq:NP_004573.2 UniGene:Hs.78948
ProteinModelPortal:P53611 SMR:P53611 IntAct:P53611 MINT:MINT-260716
STRING:P53611 PhosphoSite:P53611 DMDM:2506788 PaxDb:P53611
PRIDE:P53611 Ensembl:ENST00000319942 GeneID:5876 KEGG:hsa:5876
UCSC:uc001dgy.1 GeneCards:GC01P076251 HGNC:HGNC:9796 HPA:HPA026585
HPA:HPA027167 MIM:179080 neXtProt:NX_P53611 PharmGKB:PA34157
InParanoid:P53611 PhylomeDB:P53611 BRENDA:2.5.1.60 BindingDB:P53611
ChEMBL:CHEMBL2338 ChiTaRS:RABGGTB GenomeRNAi:5876 NextBio:22832
ArrayExpress:P53611 Bgee:P53611 CleanEx:HS_RABGGTB
Genevestigator:P53611 Uniprot:P53611
Length = 331
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 179/306 (58%), Positives = 239/306 (78%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ GLQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP++P + +P
Sbjct: 258 IDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVNPVFCMPE 317
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 318 EVLQRV 323
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/179 (20%), Positives = 85/179 (47%)
Query: 90 VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKIN 149
V+ D D L +K ++YI ++ + + + Y + + ++ +L ++N
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 150 VDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++ + +I SC++ GG + G + H V L + +++ +D + + ++ Q
Sbjct: 68 REEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQ 127
Query: 210 VKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
+ G G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>UNIPROTKB|F1P6X0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AAEX03004896 Ensembl:ENSCAFT00000032473 Uniprot:F1P6X0
Length = 331
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 178/306 (58%), Positives = 237/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 258 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 317
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 318 EVLRRV 323
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/179 (20%), Positives = 85/179 (47%)
Query: 90 VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKIN 149
V+ D D L +K ++YI ++ + + + Y + + ++ +L ++N
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 150 VDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++ + +I SC++ GG + G + H V L + +++ +D + + ++ Q
Sbjct: 68 REEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQ 127
Query: 210 VKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
+ G G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>UNIPROTKB|G8JKY6 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:DAAA02008284 Ensembl:ENSBTAT00000024551 Uniprot:G8JKY6
Length = 331
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 178/306 (58%), Positives = 237/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 258 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 317
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 318 EVLRRV 323
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/179 (20%), Positives = 85/179 (47%)
Query: 90 VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKIN 149
V+ D D L +K ++YI ++ + + + Y + + ++ +L ++N
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 150 VDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++ + +I SC++ GG + G + H V L + +++ +D + + ++ Q
Sbjct: 68 REEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQ 127
Query: 210 VKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
+ G G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>UNIPROTKB|Q5E9B3 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 EMBL:BT021007
EMBL:BC147953 IPI:IPI00705500 RefSeq:NP_001015646.1
UniGene:Bt.20263 ProteinModelPortal:Q5E9B3 SMR:Q5E9B3 STRING:Q5E9B3
PRIDE:Q5E9B3 GeneID:533276 KEGG:bta:533276 CTD:5876
HOVERGEN:HBG008182 InParanoid:Q5E9B3 OrthoDB:EOG4V6ZGV
NextBio:20875982 Uniprot:Q5E9B3
Length = 331
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 178/306 (58%), Positives = 237/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 258 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 317
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 318 EVLRRV 323
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/179 (20%), Positives = 85/179 (47%)
Query: 90 VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKIN 149
V+ D D L +K ++YI ++ + + + Y + + ++ +L ++N
Sbjct: 8 VIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMN 67
Query: 150 VDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++ + +I SC++ GG + G + H V L + +++ +D + + ++ Q
Sbjct: 68 REEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVVEYVQSLQ 127
Query: 210 VKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
+ G G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>UNIPROTKB|F1LSM6 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 PANTHER:PTHR11774:SF5 IPI:IPI00421632
PRIDE:F1LSM6 Ensembl:ENSRNOT00000065997 ArrayExpress:F1LSM6
Uniprot:F1LSM6
Length = 331
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 179/306 (58%), Positives = 236/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 258 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 317
Query: 304 DVVNRI 309
DV+ R+
Sbjct: 318 DVLQRV 323
Score = 132 (51.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 36/174 (20%), Positives = 83/174 (47%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
D D L +K ++YI ++ + + + Y + + ++ +L ++N ++ +
Sbjct: 13 DAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEIL 72
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGG 214
+I SC++ GG + G + H V L + ++H ++ D + ++ Q + G
Sbjct: 73 VFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGS 132
Query: 215 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 133 FAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>MGI|MGI:99537 [details] [associations]
symbol:Rabggtb "RAB geranylgeranyl transferase, b subunit"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 MGI:MGI:99537 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 EMBL:CH466532 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
PDB:3PZ1 PDB:3PZ2 PDB:3PZ3 PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:U12922
EMBL:BC132473 EMBL:BC138547 IPI:IPI00133505 PIR:I49116 PIR:JC6177
RefSeq:NP_035361.2 UniGene:Mm.277831 ProteinModelPortal:P53612
SMR:P53612 STRING:P53612 PhosphoSite:P53612 PaxDb:P53612
PRIDE:P53612 Ensembl:ENSMUST00000167111 GeneID:19352 KEGG:mmu:19352
InParanoid:A2RTE6 EvolutionaryTrace:P53612 NextBio:296383
Bgee:P53612 CleanEx:MM_RABGGTB Genevestigator:P53612
GermOnline:ENSMUSG00000038975 Uniprot:P53612
Length = 339
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 179/306 (58%), Positives = 235/306 (76%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++ +I
Sbjct: 26 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKS 85
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D V +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 86 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDI 145
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 146 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 205
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 206 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 265
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 266 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 325
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 326 EVLQRV 331
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 36/174 (20%), Positives = 83/174 (47%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
D D L +K ++YI ++ + + + Y + + ++ +L ++N ++ +
Sbjct: 21 DAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEIL 80
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGG 214
+I SC++ GG + G + H V L + ++H ++ D + ++ Q + G
Sbjct: 81 VFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVVAYVQSLQKEDGS 140
Query: 215 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 141 FAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 193
>RGD|3530 [details] [associations]
symbol:Rabggtb "Rab geranylgeranyltransferase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001330 InterPro:IPR026873
Pfam:PF00432 RGD:3530 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV CTD:5876 HOVERGEN:HBG008182 EMBL:L10416
EMBL:S62097 IPI:IPI00421632 PIR:B45977 RefSeq:NP_619715.1
UniGene:Rn.107818 ProteinModelPortal:Q08603 SMR:Q08603 DIP:DIP-6138N
STRING:Q08603 PRIDE:Q08603 GeneID:25533 KEGG:rno:25533
InParanoid:Q08603 EvolutionaryTrace:Q08603 NextBio:607037
ArrayExpress:Q08603 Genevestigator:Q08603
GermOnline:ENSRNOG00000009992 Uniprot:Q08603
Length = 331
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 178/306 (58%), Positives = 236/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 137
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 138 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 197
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 198 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 257
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 258 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 317
Query: 304 DVVNRI 309
+V+ R+
Sbjct: 318 EVLQRV 323
Score = 132 (51.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 36/174 (20%), Positives = 83/174 (47%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
D D L +K ++YI ++ + + + Y + + ++ +L ++N ++ +
Sbjct: 13 DAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEIL 72
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGG 214
+I SC++ GG + G + H V L + ++H ++ D + ++ Q + G
Sbjct: 73 VFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGS 132
Query: 215 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 133 FAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 185
>UNIPROTKB|F1M052 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 IPI:IPI00951311 Ensembl:ENSRNOT00000013660
ArrayExpress:F1M052 Uniprot:F1M052
Length = 337
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 179/306 (58%), Positives = 236/306 (77%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I
Sbjct: 25 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS 84
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Y+ LQ EDGSF+GDI
Sbjct: 85 CQHE-GGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAGDI 143
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A+ L++L +LD INV+KA+E+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 144 WGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCC 203
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL +I R+HW
Sbjct: 204 TGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHW 263
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +KP+ P + +P
Sbjct: 264 IDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPE 323
Query: 304 DVVNRI 309
DV+ R+
Sbjct: 324 DVLQRV 329
Score = 131 (51.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/174 (20%), Positives = 84/174 (48%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV 154
D D L +K ++YI ++ + + + Y + + ++ +L ++N ++ +
Sbjct: 20 DAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEIL 79
Query: 155 EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGG 214
+I SC++ +GG + G + H V L + ++H ++ D + ++ Q + G
Sbjct: 80 VFIKSCQH-EGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVVAYVQSLQKEDGS 138
Query: 215 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRP 268
G D +S+ +++L ++ ++ IN +K ++F+L C + + GG RP
Sbjct: 139 FAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFD-GGFGCRP 191
>UNIPROTKB|F1P4E5 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AADN02012381 IPI:IPI00594865 Ensembl:ENSGALT00000018575
Uniprot:F1P4E5
Length = 343
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 176/306 (57%), Positives = 235/306 (76%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L ++KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++++I
Sbjct: 30 LLSEKHADYIASYGTKKDDYEYCMSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILAFIKS 89
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L++ + ++D +K+ Y+ LQ EDGSF+GD
Sbjct: 90 CQHECGGISASIGHDPHLLYTLSAVQILILYESLHVVDVNKIVEYVQSLQKEDGSFAGDK 149
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGE+DTRFS+ A L++L +LD I+V KAVE+++SC N DGGFGC PG ESH+GQI+CC
Sbjct: 150 WGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCC 209
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
G LAI LH ++ DLLGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL MI R+HW
Sbjct: 210 TGFLAITDQLHQINVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRLHW 269
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPV 303
I+++KL FIL CQD E GG +DRP D VD FHT FG+AGLSLL +K ++P + +P
Sbjct: 270 IDREKLRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKAVNPVFCMPE 329
Query: 304 DVVNRI 309
DV+ RI
Sbjct: 330 DVLQRI 335
>DICTYBASE|DDB_G0290671 [details] [associations]
symbol:rabggtb "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018344
"protein geranylgeranylation" evidence=IEA;ISS] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
dictyBase:DDB_G0290671 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GenomeReviews:CM000154_GR EMBL:AAFI02000164
eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_001733035.1
ProteinModelPortal:B0G172 SMR:B0G172 STRING:B0G172
EnsemblProtists:DDB0233949 GeneID:8627741 KEGG:ddi:DDB_G0290671
Uniprot:B0G172
Length = 339
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 184/308 (59%), Positives = 231/308 (75%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L DKHV+YI+ + KKDSFE V EH+R+NG YWGL++L +L LD +D+ +VI W+L
Sbjct: 22 LLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLS 81
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ +GGF GN HD H+L TLSAVQ+L +D +D +D + V +Y+V LQ EDGSF GD
Sbjct: 82 CQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVVKLQREDGSFVGDQ 141
Query: 124 WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCC 183
WGEVDTRFSY AI CLS+L+ LDKIN +KAVEYI+SC+N DGGFG PG ESH+GQIF C
Sbjct: 142 WGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTC 201
Query: 184 VGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 243
VGAL+I ++ +D D LGWWL ERQ+ +GGLNGRPEK DVCYSWWVLS+L IDR+HW
Sbjct: 202 VGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHW 261
Query: 244 INKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY--PGLKPIDPAYAL 301
I+ DKL +IL CQD E GGI+D+P D DVFHT+FG+ GLSL+ Y ++ IDP YAL
Sbjct: 262 IDNDKLKSYILKCQDNETGGIADKPGDIPDVFHTFFGICGLSLMGYFKDQIESIDPVYAL 321
Query: 302 PVDVVNRI 309
+ ++
Sbjct: 322 GTKTLQKL 329
Score = 217 (81.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 60/241 (24%), Positives = 117/241 (48%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ +L ++ +++++S +K F L + L LD +D V+ +
Sbjct: 67 LDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDY 126
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
++K Q E G F G+ + ++ +A+ L+L +D ++ +K YI+ QN DG F
Sbjct: 127 VVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDGGF- 185
Query: 121 GDIWGEVDTRFSYIAIC--CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
G I G ++ I C LSIL ++KI++DK ++ + +GG P S
Sbjct: 186 GSIPG-AESHAGQIFTCVGALSILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVC 244
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQV-KSGGLNGRPEKLPDVCYSWWVLSSLIM 237
+ + AL+ LH +D D L ++ + Q ++GG+ +P +PDV ++++ + L +
Sbjct: 245 YSWWVLSALSAIDRLHWIDNDKLKSYILKCQDNETGGIADKPGDIPDVFHTFFGICGLSL 304
Query: 238 I 238
+
Sbjct: 305 M 305
>FB|FBgn0028970 [details] [associations]
symbol:betaggt-II "beta subunit of type II geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=NAS]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 EMBL:AE014134
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0004662
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 EMBL:AF133269 EMBL:AY060784
RefSeq:NP_524894.1 UniGene:Dm.1765 HSSP:Q08603 SMR:Q9XZ68
IntAct:Q9XZ68 MINT:MINT-777402 STRING:Q9XZ68
EnsemblMetazoa:FBtr0077631 GeneID:47757 KEGG:dme:Dmel_CG18627
UCSC:CG18627-RA CTD:47757 FlyBase:FBgn0028970 InParanoid:Q9XZ68
OrthoDB:EOG41VHJN GenomeRNAi:47757 NextBio:839096 Uniprot:Q9XZ68
Length = 347
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 163/305 (53%), Positives = 228/305 (74%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ-D 66
KHV+YI + K++D +E + E LR++G YWG T LDI+G+L+ ++ + +I ++ +CQ
Sbjct: 33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCP 92
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
+GGFA GHDPH+LYTLSA+Q+L +D ++ +D + V ++VGLQ DGSF GD WGE
Sbjct: 93 NTGGFAPCEGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGE 152
Query: 127 VDTRFSYIAICCLSILQRLDK-INVDKAVEYIVSCKN-LDGGFGCTPGGESHSGQIFCCV 184
VDTRFS+ A+ L++L R+++ I+V+KAV++++SC N DGGFG PG ESH+G I+CCV
Sbjct: 153 VDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCV 212
Query: 185 GALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWI 244
G ++ LH +D D LGWWLCERQ+ SGGLNGRPEKLPDVCYSWWVL+SL ++ R+HWI
Sbjct: 213 GFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWI 272
Query: 245 NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPVD 304
+ +KL +FIL CQD E GG SDR + D+FHT FG+ GLSLL + GLK I+P +P
Sbjct: 273 SSEKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCMPQY 332
Query: 305 VVNRI 309
+++R+
Sbjct: 333 IIDRL 337
Score = 176 (67.0 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 51/224 (22%), Positives = 104/224 (46%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLD-AVDEEDVISWI 61
E+ + V++++ +++ SF + ++ + +L +LG+++ +D E + ++
Sbjct: 125 EIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFV 184
Query: 62 LKCQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
L C +++ GGF G + H V +L ++ +LD DK+ ++ Q G +
Sbjct: 185 LSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLN 244
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQ 179
G D +S+ + L+I+ RL I+ +K ++I+SC++ + GGF G
Sbjct: 245 GRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFH 304
Query: 180 IFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLP 223
+G L++ G H + LC Q L +P+ LP
Sbjct: 305 TLFGIGGLSLLG---HSGLKAINPTLCMPQYIIDRLGIKPQLLP 345
>ASPGD|ASPL0000011885 [details] [associations]
symbol:AN3747 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0006612 EMBL:BN001302 GO:GO:0006888 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 EnsemblFungi:CADANIAT00004976 Uniprot:C8V7A2
Length = 334
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 172/314 (54%), Positives = 222/314 (70%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
+L +KH+ YI ++ +KD E + EHLRLNG YWGLT L +LG D + ++ + ++L
Sbjct: 18 KLCVEKHIDYIKKLDSRKDELEYWLTEHLRLNGVYWGLTALHLLGCPDGLPRDNAVDFVL 77
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD------KVSNYIVGLQN-E 115
CQ E+GGF GHD H+LYT+SAVQ+L D VD L+ KV ++I GLQ+ E
Sbjct: 78 SCQQENGGFGAAPGHDAHLLYTVSAVQILVTLDAVDELEKRGLGGKLKVGSFIAGLQDKE 137
Query: 116 DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
GSF GD WGE+DTRF Y A+ LS+L LD ++V KAV Y+ C+NLDGG+G TPG ES
Sbjct: 138 TGSFMGDEWGELDTRFLYGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAES 197
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235
H+GQ+F CVGALAIAG L VDKD LG WL ERQ+ GGLNGRPEKL D CYSWWV +SL
Sbjct: 198 HAGQVFTCVGALAIAGRLDLVDKDRLGGWLSERQLDHGGLNGRPEKLADACYSWWVGASL 257
Query: 236 IMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPI 295
MI +++WI+ KL +IL CQD E GG +DRP +AVDVFHT+F +AGLSLL Y G++ +
Sbjct: 258 AMIGKLNWIDGSKLAAYILRCQDPEAGGFADRPGNAVDVFHTHFAIAGLSLLGYEGVEEV 317
Query: 296 DPAYALPVDVVNRI 309
DP Y +P + ++I
Sbjct: 318 DPVYCMPKSITSKI 331
>UNIPROTKB|G4MQQ5 [details] [associations]
symbol:MGG_09304 "Type-2 protein geranylgeranyltransferase
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0006612 GO:GO:0006888
EMBL:CM001231 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_003709954.1
ProteinModelPortal:G4MQQ5 EnsemblFungi:MGG_09304T0 GeneID:2680219
KEGG:mgr:MGG_09304 Uniprot:G4MQQ5
Length = 329
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 174/312 (55%), Positives = 222/312 (71%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
LAA HVKY+ S++ +K+ +E + EHLRLNG YWGL L +LG+ DA+ + I ++L
Sbjct: 14 LAAAAHVKYVQSLDTRKEDYEYWLTEHLRLNGVYWGLVALHLLGQPDALPRDATIEFVLS 73
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD-----KVSNYIVGLQN-EDG 117
CQ ++GGF GHD H+L T+SAVQ+LA+ D +D LD +V +I LQN + G
Sbjct: 74 CQHDNGGFGAAPGHDAHMLSTVSAVQILAMVDALDELDKKGKGRRQVGKFIADLQNRQTG 133
Query: 118 SFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHS 177
+F+GD WGE DTRF Y A+ LS+L L+ ++V KAV++IV+C N DGG+G PG ESHS
Sbjct: 134 TFAGDEWGEEDTRFLYGALNALSLLGLLEMVDVGKAVDHIVACANFDGGYGNRPGAESHS 193
Query: 178 GQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIM 237
GQIF CV AL+IAG L VD D LG WL ERQ+ GGLNGRPEK DVCYSWWVLSSL
Sbjct: 194 GQIFTCVAALSIAGRLDLVDTDKLGRWLSERQIAGGGLNGRPEKQEDVCYSWWVLSSLET 253
Query: 238 IDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDP 297
I R HWI++D+L FIL CQD E GG+SDRP + VDVFHT FG+ GLSLL++PGL+ +DP
Sbjct: 254 IGRTHWIDRDQLAAFILKCQDTEKGGMSDRPGNQVDVFHTCFGLTGLSLLKWPGLEDVDP 313
Query: 298 AYALPVDVVNRI 309
Y +P + RI
Sbjct: 314 VYCMPKATIQRI 325
>SGD|S000006380 [details] [associations]
symbol:BET2 "Beta subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0018344 "protein geranylgeranylation" evidence=IEA;IDA]
[GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA;IDA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IDA;IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 SGD:S000006380
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
EMBL:BK006949 GO:GO:0006888 EMBL:U25842 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 GO:GO:0005968
OrthoDB:EOG43V34B EMBL:M29585 EMBL:M26597 EMBL:AY558067 PIR:S59834
RefSeq:NP_015502.1 ProteinModelPortal:P20133 SMR:P20133
DIP:DIP-2214N IntAct:P20133 MINT:MINT-642059 STRING:P20133
PaxDb:P20133 EnsemblFungi:YPR176C GeneID:856306 KEGG:sce:YPR176C
CYGD:YPR176c OMA:ERQDYES NextBio:981673 Genevestigator:P20133
GermOnline:YPR176C Uniprot:P20133
Length = 325
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 174/312 (55%), Positives = 218/312 (69%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH++YI S++ KK +FE + EHLRLNG YWGLT L +L + +E+VIS++L
Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLS 66
Query: 64 CQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK---VSNYIVGLQNEDGSF 119
C D+ G FA HD H+L TLSAVQ+LA +D +D+L D+ + ++I G Q EDGSF
Sbjct: 67 CWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSF 126
Query: 120 SGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQ 179
GD +GEVDTRF Y A+ LSIL L VD AV++++ C N DGGFG P ESH+ Q
Sbjct: 127 QGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQ 186
Query: 180 IFCCVGALAIAGALHHVDKDLL---GWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLI 236
F C+GALAIA L + D L GWWLCERQ+ GGLNGRP KLPDVCYSWWVLSSL
Sbjct: 187 AFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLA 246
Query: 237 MIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPID 296
+I R+ WIN +KL +FIL CQD + GGISDRP++ VDVFHT FGVAGLSL+ Y L PID
Sbjct: 247 IIGRLDWINYEKLTEFILKCQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLVPID 306
Query: 297 PAYALPVDVVNR 308
P Y +P V ++
Sbjct: 307 PIYCMPKSVTSK 318
>POMBASE|SPAC167.02 [details] [associations]
symbol:ptb1 "geranylgeranyltransferase II beta subunit
Ptb1" species:4896 "Schizosaccharomyces pombe" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
PomBase:SPAC167.02 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0070317 GenomeReviews:CU329670_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612 GO:GO:0006888
GO:GO:0006995 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
GO:GO:0005968 EMBL:X92183 PIR:S65091 RefSeq:NP_593383.1
ProteinModelPortal:P46960 STRING:P46960 EnsemblFungi:SPAC167.02.1
GeneID:2543284 KEGG:spo:SPAC167.02 OrthoDB:EOG43V34B
NextBio:20804303 Uniprot:P46960
Length = 311
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 152/309 (49%), Positives = 216/309 (69%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
M L DKH+ Y+ + + D + + EHL ++ YW + +L K D +D+E ++S+
Sbjct: 1 MAVLLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSF 60
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
+L C ESGGFA GHD H+ T+ AVQVLA+ D + ++D DKV++YI+GLQNEDGS
Sbjct: 61 LLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMK 120
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQI 180
GD WGE+D RF Y I CL+IL +LD +N + AV++++ C N DGGFG PG ESH +
Sbjct: 121 GDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMV 180
Query: 181 FCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
F CV AL I L +D++LLGWW+ ERQVK GGLNGRPEKLPD CY WW LS L +I +
Sbjct: 181 FTCVAALKILNKLDLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGK 240
Query: 241 VHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
+ WI++++L+ F+L QD ++GG +DR +DA DV+HT F +AGLSLL++P ++P+DP +
Sbjct: 241 LDWIDRNQLIDFLLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQFPNIEPVDPRFC 300
Query: 301 LPVDVVNRI 309
LP++V ++
Sbjct: 301 LPLEVTQKM 309
>WB|WBGene00015099 [details] [associations]
symbol:ggtb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
GO:GO:0009792 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008219 GO:GO:0000003 eggNOG:COG5029 EMBL:FO080148
GO:GO:0018344 GO:GO:0004663 RefSeq:NP_498559.1 RefSeq:NP_741214.2
UniGene:Cel.10970 ProteinModelPortal:P41992 SMR:P41992
STRING:P41992 PaxDb:P41992 PRIDE:P41992 EnsemblMetazoa:B0280.1a
GeneID:175998 KEGG:cel:CELE_B0280.1 UCSC:B0280.1a CTD:175998
WormBase:B0280.1a WormBase:B0280.1b GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 InParanoid:P41992 KO:K05956 OMA:ESHAGLI
NextBio:890666 PANTHER:PTHR11774:SF5 Uniprot:P41992
Length = 335
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 149/299 (49%), Positives = 206/299 (68%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
EL D H +I EK K+S+ ++ EHLR++G YW + +D+ +L+ + E++++++L
Sbjct: 23 ELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVL 82
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGD 122
C++ GG+ GHD H+L+TL AVQ L +F+ ++ DAD +S Y+ GLQ EDGSF GD
Sbjct: 83 GCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGD 142
Query: 123 IWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
+ GEVDTRF+ ++ +L RL +N+D AV +++ C N DGGFG PG ESHSGQI+C
Sbjct: 143 LSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYC 202
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVH 242
CVGALAIAG L +D+D WL RQ SGGLNGRPEKLPDVCYSWWVL+SL ++ R++
Sbjct: 203 CVGALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLN 262
Query: 243 WINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
+I+ D + KFI CQD E GG +DRP D D FHT FG+A LSL L+ +DP + +
Sbjct: 263 FIDSDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDDTLESVDPIFCM 321
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 34/143 (23%), Positives = 63/143 (44%)
Query: 1 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISW 60
+ L D V++++ F + Y + L I G+LD +D + W
Sbjct: 165 LSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEW 224
Query: 61 ILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNED-GSF 119
+ Q +SGG G P V Y+ + LA+ +++ +D+D + +I Q+++ G F
Sbjct: 225 LAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGF 284
Query: 120 SGDIWGE-VDTRFSYIAICCLSI 141
+ D G+ D + I LS+
Sbjct: 285 A-DRPGDCADPFHTVFGIAALSL 306
>CGD|CAL0000126 [details] [associations]
symbol:BET2 species:5476 "Candida albicans" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
CGD:CAL0000126 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AACQ01000032
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
PANTHER:PTHR11774:SF5 RefSeq:XP_719325.1 ProteinModelPortal:Q5ACS9
STRING:Q5ACS9 GeneID:3639025 KEGG:cal:CaO19.7563 Uniprot:Q5ACS9
Length = 341
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 149/321 (46%), Positives = 195/321 (60%)
Query: 8 KHVKYIISVEKKK--DSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
KHV+YI+ E + + + S + L L T++ L L D D I +L
Sbjct: 17 KHVQYIVEQESHRSFEYWLSEHLRMNGLYWGVTALITMNELSALAQQDVIDYI--MLCWD 74
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDK-VDILD----------ADKVSNYIVGLQN 114
D++G F HD H+L TLSA+QVL ++D+ + +L+ +++ +I GLQ
Sbjct: 75 DKTGAFGSFPKHDGHILSTLSALQVLKIYDQELTVLNNNNESLNGNKRERLIKFITGLQL 134
Query: 115 EDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGE 174
DGSF GD +GEVDTRF Y A+ LS+L L D A +I+ C N DGGFG PG E
Sbjct: 135 PDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSE 194
Query: 175 SHSGQIFCCVGALAIAGALHHVD----KDLLGWWLCERQV-KSGGLNGRPEKLPDVCYSW 229
SH+ Q+F CVGALAI L +D K L WL ERQV SGG NGRPEKLPDVCYSW
Sbjct: 195 SHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFNGRPEKLPDVCYSW 254
Query: 230 WVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
WVLSSL ++ R +W++ L FIL CQD+ENGG SDRP + DV+HT F +AGLSL++Y
Sbjct: 255 WVLSSLSILKRKNWVDLKILENFILTCQDLENGGFSDRPGNQTDVYHTCFAIAGLSLIDY 314
Query: 290 P--GLKPIDPAYALPVDVVNR 308
G K IDP Y +PV+V ++
Sbjct: 315 KKYGFKEIDPVYCMPVEVTSK 335
Score = 154 (59.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/175 (24%), Positives = 88/175 (50%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
++ +K+I ++ SF+ + Y +++L +L L + ++I++C +
Sbjct: 123 ERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFN 182
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDAD----KVSNYIVGLQN-EDGSFSG 121
GGF G + H + V LA+ +K+D+LD + K+ +++ Q G F+G
Sbjct: 183 FDGGFGLIPGSESHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQVLPSGGFNG 242
Query: 122 DIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGES 175
D +S+ + LSIL+R + +++ +I++C++L+ GGF PG ++
Sbjct: 243 RPEKLPDVCYSWWVLSSLSILKRKNWVDLKILENFILTCQDLENGGFSDRPGNQT 297
>UNIPROTKB|D3DQ78 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
EMBL:CH471059 EMBL:AL357314 GO:GO:0018344 GO:GO:0004663
PANTHER:PTHR11774:SF5 UniGene:Hs.78948 HGNC:HGNC:9796
ChiTaRS:RABGGTB IPI:IPI01013423 SMR:D3DQ78 Ensembl:ENST00000535300
Uniprot:D3DQ78
Length = 157
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 97/148 (65%), Positives = 117/148 (79%)
Query: 162 NLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
N DGGFGC PG ESH+GQI+CC G LAI LH V+ DLLGWWLCERQ+ SGGLNGRPEK
Sbjct: 2 NFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEK 61
Query: 222 LPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGV 281
LPDVCYSWWVL+SL +I R+HWI+++KL FIL CQD E GG +DRP D VD FHT FG+
Sbjct: 62 LPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGI 121
Query: 282 AGLSLLEYPGLKPIDPAYALPVDVVNRI 309
AGLSLL +KP++P + +P +V+ R+
Sbjct: 122 AGLSLLGEEQIKPVNPVFCMPEEVLQRV 149
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 36 AYWGLTTLDILGKLDAVDEEDVISWILKCQDE-SGGFAGNIGH--DP-HVLYTLSAVQVL 91
++W L +L I+G+L +D E + ++IL CQDE +GGFA G DP H L+ ++ + +L
Sbjct: 68 SWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 127
>GENEDB_PFALCIPARUM|PFF0120w [details] [associations]
symbol:PFF0120w "putative
geranylgeranyltransferase" species:5833 "Plasmodium falciparum"
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=ISS] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AL844505 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5
RefSeq:XP_966015.1 ProteinModelPortal:C6KSM5
EnsemblProtists:PFF0120w:mRNA GeneID:3885742 KEGG:pfa:PFF0120w
EuPathDB:PlasmoDB:PF3D7_0602500 ProtClustDB:CLSZ2433471
Uniprot:C6KSM5
Length = 379
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 95/212 (44%), Positives = 136/212 (64%)
Query: 103 DKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
+ YI+ L NEDGSF GD+WGEVDTRF Y A+ CL+IL +++ + VDK Y+++
Sbjct: 155 ENTCKYILTLFNEDGSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYA 214
Query: 163 L-DGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
+ + GF G E H+ +FCC+ L + L+ ++++ L WL RQ +GG NGR EK
Sbjct: 215 ICENGFSWVSGNEPHAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEK 274
Query: 222 LPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGV 281
L D CYSWW+ S+LI++ + +WINK+ L +IL CQD+E GGISD PD D+ HT+FG+
Sbjct: 275 LTDTCYSWWIFSTLIVLKKYNWINKNALKNYILLCQDIEKGGISDNPDCLPDICHTFFGL 334
Query: 282 AGLSLLEYPG-------LKPIDPAYALPVDVV 306
A LSL++ L+ + P YA+PV V
Sbjct: 335 AALSLIDNLNESEKKYTLQQMHPVYAIPVHTV 366
Score = 211 (79.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 72/294 (24%), Positives = 139/294 (47%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
E +KH++Y+ S K++ E + E L++ G ++ L + IL +E+ I++IL
Sbjct: 6 EFVQEKHIQYLESYTTIKNAEELIFNETLKMCGVFYFLCSCKILSHT-IEKKEEFINFIL 64
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLAL----FDKVDILDADKVSNYIVGLQNEDGS 118
KCQ+ GGF NI +D H++ T A+ L L FDK++ DK +N+ + N + +
Sbjct: 65 KCQNVDGGFGNNINYDSHIVSTHHAILSLLLLNYSFDKINEY-MDKANNHH-DINNTNDN 122
Query: 119 FSGDIWGEVDTR---FSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
D+ + F+ ++ + + N K YI++ N DG F GE
Sbjct: 123 NKVDLNNTNNNNKLDFNNTNDNNYNVYSKSIRENTCK---YILTLFNEDGSFKGDMWGEV 179
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSS 234
+ ++ V L I ++ V D + +L + G + P + +++
Sbjct: 180 DTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYAICENGFSWVSGNEPHAASVFCCIAT 239
Query: 235 LIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
L +I +++ IN++KL + L + NGG + R + D ++++ + L +L+
Sbjct: 240 LFLIQKLYLINENKLAHW-LSLRQTTNGGFNGRAEKLTDTCYSWWIFSTLIVLK 292
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/193 (23%), Positives = 95/193 (49%)
Query: 11 KYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK----CQD 66
KYI+++ + SF+ + + Y ++ L IL K++ V + + S++L C++
Sbjct: 159 KYILTLFNEDGSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNYAICEN 218
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGE 126
GF+ G++PH + L L K+ +++ +K+++++ Q +G F+G
Sbjct: 219 ---GFSWVSGNEPHAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEKL 275
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLD-GGFGCTPGGESHSGQIFCCVG 185
DT +S+ L +L++ + IN + YI+ C++++ GG P F +
Sbjct: 276 TDTCYSWWIFSTLIVLKKYNWINKNALKNYILLCQDIEKGGISDNPDCLPDICHTFFGLA 335
Query: 186 ALAIAGALHHVDK 198
AL++ L+ +K
Sbjct: 336 ALSLIDNLNESEK 348
>POMBASE|SPAC17G6.04c [details] [associations]
symbol:cpp1 "protein farnesyltransferase beta subunit
Cpp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0010958 "regulation of amino acid import" evidence=IGI]
[GO:0018343 "protein farnesylation" evidence=IMP;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 PomBase:SPAC17G6.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
GO:GO:0008270 GO:GO:0042127 GO:GO:0018343 GO:GO:0006995
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 OMA:HPVYNIC PIR:T37836
RefSeq:NP_594251.1 ProteinModelPortal:O13782 STRING:O13782
EnsemblFungi:SPAC17G6.04c.1 GeneID:2542380 KEGG:spo:SPAC17G6.04c
OrthoDB:EOG4ZPJ4B NextBio:20803439 GO:GO:0010958 Uniprot:O13782
Length = 382
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 100/300 (33%), Positives = 162/300 (54%)
Query: 8 KHVKYIISVEKKKDSFES--VVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
KH+KY+ K D S V++ R YW L++L ILGKLD+ E IS + + +
Sbjct: 33 KHLKYLT---KMLDPLPSPFTVLDASRAWMVYWELSSLAILGKLDSSVCERAISSVRQLK 89
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVD---ILDADKVSNYIVGLQNEDGSFSGD 122
SGGF G G D H+L T +++ + L D D +++ D++ +++ L+N DGSF +
Sbjct: 90 GPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVN 149
Query: 123 IWGEVDTRFSYIAICCLSILQ-RLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIF 181
GE D R Y A+C S++ +D + ++++ C+ +GG P E+H G F
Sbjct: 150 NEGESDARSVYAAVCVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTF 209
Query: 182 CCVGALAIAGALHHVDKDLLGWWLCERQVKS-GGLNGRPEKLPDVCYSWWVLSSLIMI-- 238
C + A+A+ G L ++++ L WL +RQ + G +GR KL D CYSWWV +S +++
Sbjct: 210 CALAAIALLGGLDNLNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVGASHVIVAS 269
Query: 239 ---DRVH------WINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
H + N +KL+ +IL C +GG+ D+P D +HT + + GLS + Y
Sbjct: 270 GYGSASHKSLPNLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSSIAY 329
>DICTYBASE|DDB_G0270948 [details] [associations]
symbol:fntB "protein farnesyltransferase beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;ISS] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
dictyBase:DDB_G0270948 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 KO:K05954
OMA:QDASQPW PANTHER:PTHR11774:SF6 RefSeq:XP_646280.1 HSSP:P49356
ProteinModelPortal:Q55D51 EnsemblProtists:DDB0237553 GeneID:8617235
KEGG:ddi:DDB_G0270948 Uniprot:Q55D51
Length = 500
Score = 304 (112.1 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 61/173 (35%), Positives = 96/173 (55%)
Query: 69 GGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGSFSGDIWG 125
GGF G H HV+ T +AV L + + +D + + +++ ++ ++G+F+ + G
Sbjct: 136 GGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSEDGG 195
Query: 126 EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVG 185
E D+R +Y AI S+L L V++++SC+ +GGFG P E+H G FC V
Sbjct: 196 EYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVA 255
Query: 186 ALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMI 238
AL+I +LH +D + L W+ RQ GG GR KL D CYS+W + I+I
Sbjct: 256 ALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSYWQGAVYIII 308
Score = 133 (51.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 11 KYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGG 70
K+++ ++ K+ +F S Y + +L L A E V+ ++L CQ GG
Sbjct: 177 KFLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSCQTYEGG 236
Query: 71 FAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTR 130
F ++ H YT +V L++ + + +D + + +I Q+ DG F G VDT
Sbjct: 237 FGAYPFNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGFEGRTNKLVDTC 296
Query: 131 FSY 133
+SY
Sbjct: 297 YSY 299
Score = 106 (42.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/119 (23%), Positives = 60/119 (50%)
Query: 52 VDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK---VSNY 108
+D E + ++++ + + G F G + T A+ V ++ ++IL A+ V ++
Sbjct: 170 IDREAMYKFLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVASM---LNILTAELERGVVDF 226
Query: 109 IVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGF 167
++ Q +G F + E +++ ++ LSIL L KI+++ +I ++ DGGF
Sbjct: 227 LLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNSLHKIDMNSLHRWITYRQSNDGGF 285
Score = 100 (40.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 38/182 (20%), Positives = 82/182 (45%)
Query: 113 QNEDGSFSGDIW-GEVDTRFSYI-AICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCT 170
QN G G+ V + F+ + A+ + + I+ + ++++ K +G F
Sbjct: 133 QNGGGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSE 192
Query: 171 PGGESHSGQIFCCVGALAIAGALH-HVDKDLLGWWL-CERQVKSGGLNGRPEKLPDVCYS 228
GGE S +C + ++ L +++ ++ + L C Q GG P Y+
Sbjct: 193 DGGEYDSRTTYCAIAVASMLNILTAELERGVVDFLLSC--QTYEGGFGAYPFNEAHGGYT 250
Query: 229 WWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYF-GVAGLSLL 287
+ +++L +++ +H I+ + L ++I Q +GG R + VD ++Y+ G + +
Sbjct: 251 FCSVAALSILNSLHKIDMNSLHRWITYRQS-NDGGFEGRTNKLVDTCYSYWQGAVYIIIQ 309
Query: 288 EY 289
Y
Sbjct: 310 SY 311
Score = 88 (36.0 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 245 NKDKLVKFILD-CQ--DMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
N+ KL ++++ CQ D + G SD P D +HT +G++G+SL +Y
Sbjct: 338 NQAKLQEYVIRFCQQSDKKYSGFSDHPHRGKDYYHTCYGLSGISLSQY 385
Score = 58 (25.5 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 29/104 (27%), Positives = 43/104 (41%)
Query: 16 VEKKK------DSFESVVMEHLRLNGA-----YWGLTTLDILGKLDAVDE-----EDVIS 59
+EKKK + E + M H L+ + +W L +D+L LD+ +S
Sbjct: 56 IEKKKILNFLMNGIEKIPMSHQGLDSSKVWISFWILNGMDMLDSLDSYPNISSRASKYLS 115
Query: 60 WILKCQDESG------------GFAGNIGHDPHVLYTLSAVQVL 91
IL+ D +G GF G H HV+ T +AV L
Sbjct: 116 -ILQNDDNNGNNNNRENNQNGGGFGGGNSHTSHVVSTFAAVSAL 158
>TAIR|locus:2039752 [details] [associations]
symbol:PGGT-I species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IMP;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018344 "protein geranylgeranylation" evidence=IMP;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 GO:GO:0009737
EMBL:CP002685 GO:GO:0009733 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0009414 EMBL:AC004218 GO:GO:0009788 eggNOG:COG5029
GO:GO:0004662 GO:GO:0018344 KO:K11713 HSSP:P53610 OMA:PDLYHSY
EMBL:BT002465 EMBL:BT008464 IPI:IPI00537488 PIR:T00565
RefSeq:NP_181487.1 UniGene:At.16938 ProteinModelPortal:O80642
SMR:O80642 STRING:O80642 PaxDb:O80642 PRIDE:O80642
EnsemblPlants:AT2G39550.1 GeneID:818540 KEGG:ath:AT2G39550
TAIR:At2g39550 InParanoid:O80642 PhylomeDB:O80642
ProtClustDB:CLSN2683354 BioCyc:MetaCyc:AT2G39550-MONOMER
ArrayExpress:O80642 Genevestigator:O80642 Uniprot:O80642
Length = 375
Score = 359 (131.4 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 82/245 (33%), Positives = 126/245 (51%)
Query: 73 GNIGHD-PHVLYTLSAVQVLALFDK-VDILDADKVSNYIVGLQNEDGSFSG-DIWGEVDT 129
G++ H+ H+ T A+ +L + + +D+ + ++ LQ +DGSF I GE D
Sbjct: 126 GDLKHNGSHLASTYCALAILKVIGHDLSTIDSKSLLISMINLQQDDGSFMPIHIGGETDL 185
Query: 130 RFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAI 189
RF Y A +L ++ + A YI++C++ DGGFG PG ESH G +C + +L +
Sbjct: 186 RFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLRL 245
Query: 190 AGAL-----------HHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMI 238
G + +D LL W +RQ GG GR K D CY++W+ + L +I
Sbjct: 246 MGYIGVDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLI 305
Query: 239 DRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
I+K L KF++ CQ + GG S P D++H+Y+G SLLE GL P+ P
Sbjct: 306 GGDALIDKMALRKFLMSCQS-KYGGFSKFPGQLPDLYHSYYGYTAFSLLEEQGLSPLCPE 364
Query: 299 YALPV 303
LP+
Sbjct: 365 LGLPL 369
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 33 LNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAG-NIGHDPHVLYTLSAVQV 90
L Y L L ++G L +D + ++ ++ Q + G F +IG + + + A +
Sbjct: 135 LASTYCALAILKVIGHDLSTIDSKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAAAI 194
Query: 91 LALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAICCLSILQRL--DK 147
+ D +D + NYI+ Q+ DG F G I G E +Y AI L ++ + D
Sbjct: 195 CYMLDSWSGMDKESAKNYILNCQSYDGGF-GLIPGSESHGGATYCAIASLRLMGYIGVDL 253
Query: 148 INVDKA---------VEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDK 198
++ D + + + + + DGGF S + F L + G +DK
Sbjct: 254 LSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDK 313
Query: 199 DLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMID 239
L +L Q K GG + P +LPD+ +S++ ++ +++
Sbjct: 314 MALRKFLMSCQSKYGGFSKFPGQLPDLYHSYYGYTAFSLLE 354
Score = 66 (28.3 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 7 DKHVKYI-ISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+H+ Y+ + E ++S + L L A++ ++ L LG D VD++ V W+L Q
Sbjct: 38 DRHLMYLEMMYELLPYHYQSQEINRLTL--AHFIISGLHFLGARDRVDKDVVAKWVLSFQ 95
>UNIPROTKB|F1NE58 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:AADN02074198 EMBL:AADN02074199 EMBL:AADN02074200
EMBL:AADN02074201 IPI:IPI00575455 Ensembl:ENSGALT00000013349
Uniprot:F1NE58
Length = 332
Score = 327 (120.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 78/225 (34%), Positives = 116/225 (51%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ D + + LQ EDGSF + G E D RF Y A C
Sbjct: 75 HIAMTYTGLSCLVILGDDLSRVNKDALLAGLRALQLEDGSFCAVLEGSENDMRFVYCASC 134
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA++YI + D G G ESH G FC + +L + G L V
Sbjct: 135 ICYMLDNWSGMDMKKAIDYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 194
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L +G W RQ G +GRP K D CYS+WV ++L +++ + N +K +I
Sbjct: 195 SEKELSRIGRWCVMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLNLFQYTNFEKNRNYI 252
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+ G+ + PA
Sbjct: 253 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLIGEAGICKVHPA 297
Score = 79 (32.9 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 32 RLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 1 RLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 34
>RGD|621754 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I, beta
subunit" species:10116 "Rattus norvegicus" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 314 (115.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 78/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 106 (42.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/201 (24%), Positives = 82/201 (40%)
Query: 45 ILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK 104
+L +D + IS+I + G A G + H T + L L K++ + ++K
Sbjct: 184 MLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEK 243
Query: 105 VSNYIVG--LQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
N I + + + G VDT +S+ L +L+ N +K YI+S ++
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 163 -LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
L GGF P +SH + G I G L +++ G +C+ E+
Sbjct: 304 RLVGGFAKWP--DSHPDALHAYFG---ICG-LSLMEES--G--ICKVHPALNVSTRTSER 353
Query: 222 LPDVCYSWWVLSSLIMIDRVH 242
L D+ SW S D VH
Sbjct: 354 LRDLHQSWKTKDSKQCSDNVH 374
Score = 89 (36.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|P53610 [details] [associations]
symbol:Pggt1b "Geranylgeranyl transferase type-1 subunit
beta" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 314 (115.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 78/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 106 (42.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/201 (24%), Positives = 82/201 (40%)
Query: 45 ILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK 104
+L +D + IS+I + G A G + H T + L L K++ + ++K
Sbjct: 184 MLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEK 243
Query: 105 VSNYIVG--LQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
N I + + + G VDT +S+ L +L+ N +K YI+S ++
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 163 -LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
L GGF P +SH + G I G L +++ G +C+ E+
Sbjct: 304 RLVGGFAKWP--DSHPDALHAYFG---ICG-LSLMEES--G--ICKVHPALNVSTRTSER 353
Query: 222 LPDVCYSWWVLSSLIMIDRVH 242
L D+ SW S D VH
Sbjct: 354 LRDLHQSWKTKDSKQCSDNVH 374
Score = 89 (36.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|Q5T4U8 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152 EMBL:AL357314
UniGene:Hs.78948 HGNC:HGNC:9796 ChiTaRS:RABGGTB IPI:IPI00514956
SMR:Q5T4U8 STRING:Q5T4U8 Ensembl:ENST00000370826
HOGENOM:HOG000139659 HOVERGEN:HBG058332 Uniprot:Q5T4U8
Length = 152
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 67/129 (51%), Positives = 96/129 (74%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ GLQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDI 137
Query: 124 WGEVDTRFS 132
WG V RFS
Sbjct: 138 WGNV--RFS 144
>ZFIN|ZDB-GENE-050913-85 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase
type I, beta subunit" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 ZFIN:ZDB-GENE-050913-85
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152
eggNOG:COG5029 CTD:5229 HOGENOM:HOG000180333 HOVERGEN:HBG008181
KO:K11713 OrthoDB:EOG4KD6MC EMBL:BC097132 IPI:IPI00484889
RefSeq:NP_001025426.1 UniGene:Dr.78336 ProteinModelPortal:Q4V8Z9
SMR:Q4V8Z9 GeneID:570808 KEGG:dre:570808 NextBio:20890306
ArrayExpress:Q4V8Z9 Uniprot:Q4V8Z9
Length = 355
Score = 320 (117.7 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 83/225 (36%), Positives = 114/225 (50%)
Query: 80 HVLYTLSAVQ-VLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
HV T + + +L L D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 110 HVTMTYTGLACLLILGDDLGRVDRAACVSGLRALQLEDGSFYAVPEGSENDMRFVYCAAC 169
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L ++ K ++YI + D G G G ESH G FC V +L + G L V
Sbjct: 170 ICFMLDDWSGMDRQKTIDYIRRSTSFDFGIGQGAGLESHGGSTFCAVASLCMMGKLREVF 229
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+++L L W RQ G GRP K D CYS+WV ++L ++D + N +K +I
Sbjct: 230 SERELGRLRRWCVLRQ--QNGFQGRPNKPVDTCYSFWVGATLQLLDVFQYTNFEKNRNYI 287
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D HTYFG+ GLSL+ GL+P+ A
Sbjct: 288 LSTQDRLVGGFAKWPDSHPDPLHTYFGICGLSLMGEAGLQPVHAA 332
Score = 82 (33.9 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 29 EHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
E RL A++ L+ LD+LG LD VD +I WI Q
Sbjct: 33 ETSRLTIAFFSLSGLDVLGALDVVDRHSLIEWIYSLQ 69
>MGI|MGI:1917514 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I,
beta subunit" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042277 "peptide
binding" evidence=ISO] [GO:0045787 "positive regulation of cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=ISO] InterPro:IPR001330 Pfam:PF00432
MGI:MGI:1917514 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0008152 GO:GO:0042277 GO:GO:0045787 eggNOG:COG5029
GO:GO:0004662 GO:GO:0019840 GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:AK081731 IPI:IPI00225757 RefSeq:NP_766215.1
UniGene:Mm.262096 UniGene:Mm.393044 ProteinModelPortal:Q8BUY9
SMR:Q8BUY9 STRING:Q8BUY9 PhosphoSite:Q8BUY9 PaxDb:Q8BUY9
PRIDE:Q8BUY9 Ensembl:ENSMUST00000025354 GeneID:225467
KEGG:mmu:225467 UCSC:uc008evk.1 InParanoid:Q8BUY9 BindingDB:Q8BUY9
ChEMBL:CHEMBL2295 NextBio:377678 Bgee:Q8BUY9 Genevestigator:Q8BUY9
GermOnline:ENSMUSG00000024477 Uniprot:Q8BUY9
Length = 377
Score = 313 (115.2 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 78/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + +D + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLIILGDDLGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 106 (42.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/201 (24%), Positives = 82/201 (40%)
Query: 45 ILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK 104
+L +D + IS+I + G A G + H T + L L K++ + ++K
Sbjct: 184 MLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEK 243
Query: 105 VSNYIVG--LQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
N I + + + G VDT +S+ L +L+ N +K YI+S ++
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 163 -LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
L GGF P +SH + G I G L +++ G +C+ E+
Sbjct: 304 RLVGGFAKWP--DSHPDALHAYFG---ICG-LSLMEES--G--ICKVHPALNVSTRTSER 353
Query: 222 LPDVCYSWWVLSSLIMIDRVH 242
L D+ SW S D VH
Sbjct: 354 LRDLHQSWKTKDSKQCSDNVH 374
Score = 89 (36.4 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|Q5EAD5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152
eggNOG:COG5029 GO:GO:0004662 EMBL:BT020634 IPI:IPI00715065
RefSeq:NP_001015560.1 UniGene:Bt.17618 ProteinModelPortal:Q5EAD5
SMR:Q5EAD5 PRIDE:Q5EAD5 GeneID:509322 KEGG:bta:509322 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 InParanoid:Q5EAD5 KO:K11713
BindingDB:Q5EAD5 ChEMBL:CHEMBL4347 NextBio:20868922 Uniprot:Q5EAD5
Length = 377
Score = 310 (114.2 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 77/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 89 (36.4 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|B4DL54 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ59570, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 HOVERGEN:HBG008173 OMA:HPVYNIC
UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960
EMBL:AK296850 IPI:IPI00909112 RefSeq:NP_001189488.1 SMR:B4DL54
STRING:B4DL54 Ensembl:ENST00000447296 GeneID:100529261
KEGG:hsa:100529261 UCSC:uc010tsl.2 CTD:100529261
GenomeRNAi:100529261 Uniprot:B4DL54
Length = 471
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 107 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 164
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 165 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 224
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 225 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 284
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 285 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 344
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 345 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 404
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 405 SIAQHFG 411
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + + D
Sbjct: 145 LELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYD 204
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 205 IINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 261
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ R +N L++++ Q GG
Sbjct: 262 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGG 321
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 322 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 359
>UNIPROTKB|B4E1A0 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ58825, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6
HOVERGEN:HBG008173 UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745
HGNC:HGNC:42960 GeneID:100529261 KEGG:hsa:100529261 CTD:100529261
GenomeRNAi:100529261 EMBL:AK303739 IPI:IPI00984229
RefSeq:NP_001189487.1 SMR:B4E1A0 STRING:B4E1A0
Ensembl:ENST00000542227 UCSC:uc010tsm.2 Uniprot:B4E1A0
Length = 391
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 27 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 84
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 85 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 144
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 145 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 204
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 205 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 264
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 265 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 324
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 325 SIAQHFG 331
Score = 151 (58.2 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + + D
Sbjct: 65 LELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYD 124
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 125 IINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 181
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ R +N L++++ Q GG
Sbjct: 182 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGG 241
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 242 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 279
>UNIPROTKB|H0YHI0 [details] [associations]
symbol:CHURC1-FNTB "Protein CHURC1-FNTB" species:9606 "Homo
sapiens" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6 OMA:HPVYNIC
EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960 Ensembl:ENST00000549987
Uniprot:H0YHI0
Length = 472
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 108 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 165
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 166 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 225
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 226 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 285
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 286 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 345
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 346 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 405
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 406 SIAQHFG 412
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + + D
Sbjct: 146 LELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYD 205
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 206 IINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 262
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ R +N L++++ Q GG
Sbjct: 263 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGG 322
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 323 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 360
>UNIPROTKB|P49356 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0004660
"protein farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0005875 GO:GO:0008285
EMBL:CH471061 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008270 GO:GO:0034097 GO:GO:0014070
GO:GO:0042277 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 PDB:1JCQ PDB:1LD7 PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4
PDB:1TN6 PDB:2F0Y PDB:2H6F PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ
PDB:3E37 PDBsum:1JCQ PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC
PDBsum:1S63 PDBsum:1SA4 PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F
PDBsum:2H6G PDBsum:2H6H PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37
GO:GO:0019840 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
HOVERGEN:HBG008173 OrthoDB:EOG4KKZ33 EMBL:L00635 EMBL:AK315714
EMBL:BC020232 EMBL:L10414 IPI:IPI00026817 PIR:B49274
RefSeq:NP_002019.1 UniGene:Hs.325531 ProteinModelPortal:P49356
SMR:P49356 IntAct:P49356 MINT:MINT-238879 STRING:P49356
PhosphoSite:P49356 DMDM:1346696 PeptideAtlas:P49356 PRIDE:P49356
DNASU:2342 Ensembl:ENST00000246166 GeneID:2342 KEGG:hsa:2342
UCSC:uc001xia.3 GeneCards:GC14P065454 HGNC:HGNC:3785 MIM:134636
neXtProt:NX_P49356 PharmGKB:PA28202 InParanoid:P49356 OMA:YWIANSL
PhylomeDB:P49356 BindingDB:P49356 ChEMBL:CHEMBL272
EvolutionaryTrace:P49356 GenomeRNAi:2342 NextBio:9505
ArrayExpress:P49356 Bgee:P49356 CleanEx:HS_FNTB
Genevestigator:P49356 GermOnline:ENSG00000125954 Uniprot:P49356
Length = 437
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + DI++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 151 (58.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 54/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + + D
Sbjct: 111 LELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYD 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 IINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ R +N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
>UNIPROTKB|P53609 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=TAS] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144
GO:GO:0008284 GO:GO:0008270 GO:GO:0034097 GO:GO:0042277
GO:GO:0045787 eggNOG:COG5029 DrugBank:DB00175 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 GO:GO:0019840 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
EMBL:L25441 EMBL:AY780790 EMBL:AC008494 IPI:IPI00022759
IPI:IPI00549741 PIR:A53044 RefSeq:NP_005014.2 UniGene:Hs.254006
ProteinModelPortal:P53609 SMR:P53609 STRING:P53609
PhosphoSite:P53609 DMDM:259016302 PaxDb:P53609 PRIDE:P53609
DNASU:5229 Ensembl:ENST00000379615 Ensembl:ENST00000419445
GeneID:5229 KEGG:hsa:5229 UCSC:uc003kqw.4 UCSC:uc010jch.3
GeneCards:GC05M114575 H-InvDB:HIX0032034 HGNC:HGNC:8895
HPA:HPA030646 MIM:602031 neXtProt:NX_P53609 PharmGKB:PA33233
InParanoid:P53609 OrthoDB:EOG4KD6MC PhylomeDB:P53609
BindingDB:P53609 ChEMBL:CHEMBL4135 GenomeRNAi:5229 NextBio:20214
Bgee:P53609 CleanEx:HS_PGGT1B Genevestigator:P53609
GermOnline:ENSG00000164219 Uniprot:P53609
Length = 377
Score = 309 (113.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 77/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 89 (36.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>TAIR|locus:2173802 [details] [associations]
symbol:ERA1 "ENHANCED RESPONSE TO ABA 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IMP] [GO:0005965 "protein farnesyltransferase complex"
evidence=IMP] [GO:0018342 "protein prenylation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0009414
GO:GO:0042127 GO:GO:0009788 GO:GO:0018343 EMBL:AB010699
GO:GO:0009934 eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 GO:GO:0018342 EMBL:AF214106 EMBL:BT030457 EMBL:U46574
EMBL:U44849 IPI:IPI00543310 RefSeq:NP_198844.1 UniGene:At.9205
ProteinModelPortal:Q38920 SMR:Q38920 IntAct:Q38920 STRING:Q38920
PaxDb:Q38920 PRIDE:Q38920 EnsemblPlants:AT5G40280.1 GeneID:834026
KEGG:ath:AT5G40280 TAIR:At5g40280 HOGENOM:HOG000190594
InParanoid:Q38920 KO:K05954 OMA:QDASQPW ProtClustDB:PLN02710
BioCyc:ARA:AT5G40280-MONOMER BioCyc:MetaCyc:AT5G40280-MONOMER
ArrayExpress:Q38920 Genevestigator:Q38920 GermOnline:AT5G40280
PANTHER:PTHR11774:SF6 Uniprot:Q38920
Length = 482
Score = 314 (115.6 bits), Expect = 5.3e-35, Sum P(2) = 5.3e-35
Identities = 75/250 (30%), Positives = 126/250 (50%)
Query: 1 MGELAADKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVI 58
M E+ DK + Y++ + + F S+ L YW L ++ +LG+ +D E + I
Sbjct: 78 MMEIQRDKQLDYLMKGLRQLGPQFSSLDANRPWL--CYWILHSIALLGETVDDELESNAI 135
Query: 59 SWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF--DK-VDILDADKVSNYIVGLQNE 115
++ +CQ GG+ G G PH+ T +AV L DK + ++ +K+S ++ +++
Sbjct: 136 DFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDT 195
Query: 116 DGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGES 175
G F GE+D R Y AI SIL +D +YI+SC+ +GG G PG E+
Sbjct: 196 SGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEA 255
Query: 176 HSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235
H G +C + A+ + + ++ D L W RQ G GR KL D CY++W +
Sbjct: 256 HGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPC 315
Query: 236 IMIDRVHWIN 245
+++ R++ N
Sbjct: 316 VLLQRLYSTN 325
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 57/246 (23%), Positives = 114/246 (46%)
Query: 52 VDEEDVISWILKCQDESGG-FAGNIGHDPHVLYTLSAVQVLALFDKV--DILDADKVSNY 108
+ + + +++K + G F+ + P + Y + + +AL + D L+++ + ++
Sbjct: 81 IQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWI--LHSIALLGETVDDELESNAI-DF 137
Query: 109 IVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSIL---QRLDKINVDKAVEYIVSCKNLDG 165
+ Q +G + G +Y A+ L L + L IN +K ++ K+ G
Sbjct: 138 LGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSG 197
Query: 166 GFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDL---LGWWLCERQVKSGGLNGRPEKL 222
GF GE + C A+++A L+ +D +L LG ++ Q GG+ G P
Sbjct: 198 GFRMHDMGEM---DVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSE 254
Query: 223 PDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVA 282
Y++ L+++I+I+ V +N D L+ + + Q +E G R + VD +T++ A
Sbjct: 255 AHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMG-FQGRTNKLVDGCYTFWQAA 313
Query: 283 GLSLLE 288
LL+
Sbjct: 314 PCVLLQ 319
Score = 85 (35.0 bits), Expect = 5.3e-35, Sum P(2) = 5.3e-35
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 249 LVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPID 296
L +++L C + +GG D+P D +HT + ++GLS+ ++ LK D
Sbjct: 394 LQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKDED 441
>ZFIN|ZDB-GENE-030131-2220 [details] [associations]
symbol:fntb "farnesyltransferase, CAAX box, beta"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 ZFIN:ZDB-GENE-030131-2220
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:AL928866 EMBL:BX255891 EMBL:BC071443
IPI:IPI00492729 RefSeq:NP_001002128.1 UniGene:Dr.77794 SMR:Q6IQG3
STRING:Q6IQG3 Ensembl:ENSDART00000038149 GeneID:323500
KEGG:dre:323500 InParanoid:Q6IQG3 NextBio:20808280 Uniprot:Q6IQG3
Length = 419
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 95/311 (30%), Positives = 156/311 (50%)
Query: 4 LAADKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L ++H Y+ + D++E + L YW L +L++L + + A DV ++
Sbjct: 58 LLREQHYHYLKKGLRHLSDAYECLDASRPWL--CYWILHSLELLEEPVPAAVASDVCQFL 115
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
+CQ +GGF G G H+ T +AV L + + ++++ + + +++ ++ DGS
Sbjct: 116 ARCQAPTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPDGS 175
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F I GEVD R +Y A S+ + D +I+SC+N +GG G PG E+H G
Sbjct: 176 FVMHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGG 235
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC AL I G H +D L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 236 YTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 295
Query: 238 IDRV------------HWINKDK-LVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R W+ + K L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 296 LHRALFKEGDSTLSVSSWMFERKALQEYILLCCQNPGGGLLDKPGKSRDFYHTSYCLSGL 355
Query: 285 SLLEYPGLKPI 295
S+ ++ G K +
Sbjct: 356 SVAQHFGNKDL 366
>MGI|MGI:1861305 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=ISO] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0010035 "response to
inorganic substance" evidence=ISO] [GO:0014070 "response to organic
cyclic compound" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=ISO]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045787 "positive regulation of cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IMP] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
MGI:MGI:1861305 GO:GO:0005875 GO:GO:0008285 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144 GO:GO:0008270
GO:GO:0034097 GO:GO:0014070 GO:GO:0042277 GO:GO:0010035
GO:GO:0042060 GO:GO:0018343 GO:GO:0048146 GO:GO:0045787
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:3PZ4 PDBsum:3PZ4
GO:GO:0019840 HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
CTD:2342 GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173
OMA:HPVYNIC OrthoDB:EOG4KKZ33 EMBL:BC031417 IPI:IPI00169914
RefSeq:NP_666039.1 UniGene:Mm.151174 ProteinModelPortal:Q8K2I1
SMR:Q8K2I1 STRING:Q8K2I1 PhosphoSite:Q8K2I1 PRIDE:Q8K2I1
Ensembl:ENSMUST00000041008 GeneID:110606 KEGG:mmu:110606
UCSC:uc007nyu.1 InParanoid:Q8K2I1 BindingDB:Q8K2I1
ChEMBL:CHEMBL2631 ChiTaRS:FNTB NextBio:364317 Bgee:Q8K2I1
CleanEx:MM_FNTB Genevestigator:Q8K2I1 GermOnline:ENSMUSG00000033373
Uniprot:Q8K2I1
Length = 437
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ DG F G + + ++ + A+C + + +
Sbjct: 111 LELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYN 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 VINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ + +N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
>RGD|620119 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta" species:10116
"Rattus norvegicus" [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISO] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018343 "protein farnesylation"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0019840 "isoprenoid binding"
evidence=IDA] [GO:0042277 "peptide binding" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 RGD:620119
GO:GO:0005875 GO:GO:0008285 GO:GO:0043234 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0051770 eggNOG:COG5029
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D PDB:1D8E
PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR PDB:1JCS
PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1
PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L
PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34
PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO
PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP
PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR
PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N94
PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R
PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2
PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81 PDBsum:2BED
PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY
PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5
PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM
PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ DG F G + + ++ + A+C + + +
Sbjct: 111 LELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYN 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 VINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ + +N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
>UNIPROTKB|Q02293 [details] [associations]
symbol:Fntb "Protein farnesyltransferase subunit beta"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
RGD:620119 GO:GO:0005875 GO:GO:0008285 GO:GO:0043234
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0045787 GO:GO:0051770
eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D
PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR
PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A
PDB:1NI1 PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ
PDB:1QE2 PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI
PDB:2R2L PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33
PDB:3E34 PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM
PDB:4GTO PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E
PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7
PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR
PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4
PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ
PDBsum:1QE2 PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81
PDBsum:2BED PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS
PDBsum:3DPY PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34
PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ
PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQIVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + ++++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ DG F G + + ++ + A+C + + +
Sbjct: 111 LELLDEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYN 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 VINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ + +N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
>UNIPROTKB|E2QZU5 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392 CTD:5229
KO:K11713 OMA:FILSTQD EMBL:AAEX03007707 RefSeq:XP_538560.2
ProteinModelPortal:E2QZU5 Ensembl:ENSCAFT00000000341 GeneID:481440
KEGG:cfa:481440 NextBio:20856233 Uniprot:E2QZU5
Length = 377
Score = 303 (111.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 76/225 (33%), Positives = 111/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMDKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 299 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 343
Score = 108 (43.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 45 ILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK 104
+L +D + I++I + G A G + H T + L L DK++ + ++K
Sbjct: 184 MLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMDKLEEVFSEK 243
Query: 105 VSNYIVG--LQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKN 162
N I + + + G VDT +S+ L +L+ N +K YI+S ++
Sbjct: 244 ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQD 303
Query: 163 -LDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVKSGGLNGRPEK 221
L GGF P +SH + G I G L +++ G +C+ E+
Sbjct: 304 RLVGGFAKWP--DSHPDALHAYFG---ICG-LSLMEES--G--ICKVHPALNVSTRTSER 353
Query: 222 LPDVCYSWWVLSSLIMIDRVH 242
L D+ SW + S + VH
Sbjct: 354 LRDLHQSWKIKDSKQCPENVH 374
Score = 89 (36.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>UNIPROTKB|F1Q0W7 [details] [associations]
symbol:FNTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965 KO:K05954
PANTHER:PTHR11774:SF6 CTD:2342 GeneTree:ENSGT00550000075042
OMA:HPVYNIC EMBL:AAEX03005789 RefSeq:XP_547857.2
Ensembl:ENSCAFT00000025678 GeneID:490735 KEGG:cfa:490735
Uniprot:F1Q0W7
Length = 437
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQMVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + +++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYGVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F + GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I +++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R HW+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 52/218 (23%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + +
Sbjct: 111 LELLDEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYG 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 VINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ + ++N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 48/204 (23%), Positives = 79/204 (38%)
Query: 2 GELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI 61
G + +K ++Y+ S+++ SF V + + AY + + + E WI
Sbjct: 170 GVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWI 229
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNE-DGSFS 120
+CQ+ GG G G + H YT + L + K L+ + ++ Q +G F
Sbjct: 230 ARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERYLNLKSLLQWVTSRQMRFEGGFQ 289
Query: 121 GDIWGEVDTRFSYIAICCLSILQRLDKINVDKAV-------------EYIVSCKNLDGGF 167
G VD +S+ L +L R D A+ EYI+ C G
Sbjct: 290 GRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGG 349
Query: 168 GCTPGGESHSGQIFC-CVGALAIA 190
G+S C C+ L+IA
Sbjct: 350 LLDKPGKSRDFYHTCYCLSGLSIA 373
>UNIPROTKB|F1S9R0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
EMBL:CU929611 Ensembl:ENSSSCT00000004178 ArrayExpress:F1S9R0
Uniprot:F1S9R0
Length = 145
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 62/122 (50%), Positives = 91/122 (74%)
Query: 4 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILK 63
L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I
Sbjct: 18 LFLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKS 77
Query: 64 CQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDI 123
CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Y+ LQ EDGSF+GDI
Sbjct: 78 CQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDI 137
Query: 124 WG 125
WG
Sbjct: 138 WG 139
>UNIPROTKB|P49355 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9913 "Bos taurus" [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0008285
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 eggNOG:COG5029 GO:GO:0004311
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 EMBL:L00633 EMBL:BC123393 IPI:IPI00705098
PIR:C49274 RefSeq:NP_786999.1 UniGene:Bt.4529
ProteinModelPortal:P49355 SMR:P49355 STRING:P49355
Ensembl:ENSBTAT00000007751 GeneID:327686 KEGG:bta:327686 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 InParanoid:P49355
OMA:HPVYNIC OrthoDB:EOG4KKZ33 BindingDB:P49355 ChEMBL:CHEMBL4671
NextBio:20810151 Uniprot:P49355
Length = 437
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 94/307 (30%), Positives = 153/307 (49%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWI 61
L +KH Y+ + + D++E + L YW L +L++L + + + DV ++
Sbjct: 73 LQREKHFHYLKRGLRQLTDAYECLDASRPWL--CYWILHSLELLDEPIPQMVATDVCQFL 130
Query: 62 LKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGS 118
CQ GGF G G PH+ T +AV L + + D+++ +K+ Y+ L+ DGS
Sbjct: 131 ELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGS 190
Query: 119 FSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSG 178
F GEVD R +Y A S+ + + E+I C+N +GG G PG E+H G
Sbjct: 191 FLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGG 250
Query: 179 QIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIM 237
FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W L +
Sbjct: 251 YTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPL 310
Query: 238 IDR-VH-----------WI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGL 284
+ R +H W+ ++ L ++IL C GG+ D+P + D +HT + ++GL
Sbjct: 311 LHRALHAQGDPALSMSRWMFHQQALQEYILMCCQCPTGGLLDKPGKSRDFYHTCYCLSGL 370
Query: 285 SLLEYPG 291
S+ ++ G
Sbjct: 371 SIAQHFG 377
Score = 150 (57.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 91 LALFDK-VDILDADKVSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLD 146
L L D+ + + A V ++ Q+ +G F G + + ++ + A+C + + D
Sbjct: 111 LELLDEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYD 170
Query: 147 KINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW-- 203
IN +K ++Y+ S K DG F GGE +C A ++A + + DL G
Sbjct: 171 VINREKLLQYLYSLKQPDGSFLMHDGGEVDVRSAYC---AASVASLTNIITPDLFEGTAE 227
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
W+ Q GG+ G P Y++ L++L+++ + +N L++++ Q GG
Sbjct: 228 WIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSLNLKSLLQWVTSRQMRFEGG 287
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYAL 301
R + VD ++++ L LL DPA ++
Sbjct: 288 FQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSM 325
>UNIPROTKB|F1RLE8 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:CU693413 EMBL:CU694231 Ensembl:ENSSSCT00000015533
Uniprot:F1RLE8
Length = 318
Score = 310 (114.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 77/225 (34%), Positives = 112/225 (49%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 62 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 121
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 122 ICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 181
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L ++ + N +K +I
Sbjct: 182 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYI 239
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
L QD GG + PD D H YFG+ GLSL+E G+ + PA
Sbjct: 240 LSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPA 284
Score = 53 (23.7 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 45 ILGKLDAVDEEDVISWILKCQ 65
+L LD V+++D+I WI Q
Sbjct: 1 MLDSLDVVNKDDIIEWIYSLQ 21
>DICTYBASE|DDB_G0269726 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase type
I" species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004659 "prenyltransferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 dictyBase:DDB_G0269726
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152 eggNOG:COG5029
GO:GO:0004662 KO:K11713 RefSeq:XP_646228.1 HSSP:P53610
ProteinModelPortal:Q55DA3 GeneID:8617182 KEGG:ddi:DDB_G0269726
OMA:FILSTQD ProtClustDB:CLSZ2431398 Uniprot:Q55DA3
Length = 352
Score = 304 (112.1 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 78/248 (31%), Positives = 126/248 (50%)
Query: 73 GNIGHD-PHVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNE-DGSFSGDI-WGEVD 128
G + +D P T A+ +L + D ++ + + + Q E DG+ SG G+ D
Sbjct: 106 GPLEYDLPSTPNTYCALLILRILGDDFSGVNKKAIIDSLRKRQRESDGAISGSPNVGDYD 165
Query: 129 TRFSYIAICCLS-ILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGAL 187
R + A C +S IL IN + A++YI SC + + FG TP E+H G +C + +L
Sbjct: 166 LRHLFSA-CAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASL 224
Query: 188 AIAGALHHVD--KDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIN 245
++ G L ++ K+ L +WL ++Q+ G GR K PD CY++W+ +SL+MIDR I+
Sbjct: 225 SLLGRLDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPDTCYAFWIGASLMMIDRYDLID 282
Query: 246 KDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPVDV 305
+ FI Q GG++ P DV H+Y + GLS P ++ + P L
Sbjct: 283 FASINAFIGSAQHEAIGGVAKEPGQLPDVMHSYLSLVGLSFGNIPSIQQVIPCLNLSKRA 342
Query: 306 VNRIFFSK 313
+ +F K
Sbjct: 343 AGKDWFEK 350
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 10 VKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVD--EEDVISWILKCQDE 67
+ YI S + +F + Y + +L +LG+LD ++ +E + W++K Q
Sbjct: 191 IDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLGRLDVLEPFKEQLTFWLVKKQIT 250
Query: 68 SGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNED-GSFSGDIWGE 126
GF G DP Y L + D+ D++D ++ +I Q+E G + +
Sbjct: 251 --GFCGRTNKDPDTCYAFWIGASLMMIDRYDLIDFASINAFIGSAQHEAIGGVAKEPGQL 308
Query: 127 VDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNL 163
D SY+++ LS N+ +++ ++ C NL
Sbjct: 309 PDVMHSYLSLVGLSFG------NIP-SIQQVIPCLNL 338
Score = 58 (25.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 23 FESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE--DVISWILKCQ 65
+ S + HL L ++ ++ LD+L K D +++E D+I+W+ Q
Sbjct: 25 YTSGLPNHLSL--IFFVVSGLDLLNKTDILEKEKQDIINWVYSRQ 67
>SGD|S000002248 [details] [associations]
symbol:RAM1 "Beta subunit of the CAAX farnesyltransferase
(FTase)" species:4932 "Saccharomyces cerevisiae" [GO:0005965
"protein farnesyltransferase complex" evidence=IEA;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 SGD:S000002248
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 EMBL:BK006938
GO:GO:0042127 GO:GO:0018343 EMBL:X95644 eggNOG:COG5029
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:YWIANSL
OrthoDB:EOG4ZPJ4B EMBL:M22753 EMBL:Z74138 EMBL:AY692971 PIR:S67626
RefSeq:NP_010193.1 ProteinModelPortal:P22007 SMR:P22007
DIP:DIP-1556N IntAct:P22007 MINT:MINT-396276 STRING:P22007
PaxDb:P22007 EnsemblFungi:YDL090C GeneID:851468 KEGG:sce:YDL090C
CYGD:YDL090c BindingDB:P22007 ChEMBL:CHEMBL4122 NextBio:968756
Genevestigator:P22007 GermOnline:YDL090C Uniprot:P22007
Length = 431
Score = 317 (116.6 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 78/265 (29%), Positives = 132/265 (49%)
Query: 37 YWGLTTLDILGK--LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF 94
YW +L ++ + L + ++ + G F G G H+ T +A+ L+L
Sbjct: 111 YWIANSLKVMDRDWLSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLC 170
Query: 95 DKVD----ILDADKVSNYIVGLQNEDGSFSGDIW-GEVDTRFSYIAICCLSILQRLDKIN 149
D +D +D + +++ L+ +G F + GEVDTR Y A+ ++L L +
Sbjct: 171 DNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEEL 230
Query: 150 VDKAVEYIVSCKNLDGGFGCTPG-GESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCER 208
+ + Y+ +C+N +GGFG P E+H G FC +LAI ++ ++ + L W R
Sbjct: 231 TEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSAR 290
Query: 209 QVKSG-GLNGRPEKLPDVCYSWWVLSSLIMIDRVHW---INKDKLVKFILDC-QDMENGG 263
Q++ G GR KL D CYS+WV S +++ + NK L +IL C Q+ E G
Sbjct: 291 QLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPG 350
Query: 264 ISDRPDDAVDVFHTYFGVAGLSLLE 288
+ D+P D +HT + + GL++ E
Sbjct: 351 LRDKPGAHSDFYHTNYCLLGLAVAE 375
Score = 113 (44.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 11 KYIISVEKKKDSFESVV-MEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESG 69
+++IS+++ F++ + + + G Y L+ +L L E V++++ CQ+ G
Sbjct: 187 QWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEG 246
Query: 70 GFAGNIGH--DPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ-NEDGSFSGDIWGE 126
GF G+ H + H YT A LA+ +D ++ +K+ + Q E+ F G
Sbjct: 247 GF-GSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKL 305
Query: 127 VDTRFSYIAICCLSILQRLDK---INVDKAVEYIVSC--KNLDGGFGCTPGGESHSGQIF 181
VD +S+ +IL+ N +YI+ C + G PG S
Sbjct: 306 VDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTN 365
Query: 182 CCVGALAIA 190
C+ LA+A
Sbjct: 366 YCLLGLAVA 374
Score = 43 (20.2 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 292 LKPIDPAYALPVDVVNRI 309
L ++P Y LP++ V +I
Sbjct: 402 LTDVNPVYGLPIENVRKI 419
>WB|WBGene00006465 [details] [associations]
symbol:fntb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042
OMA:HPVYNIC HSSP:P49356 PIR:T21291 RefSeq:NP_506580.1
ProteinModelPortal:Q19752 IntAct:Q19752 STRING:Q19752 PaxDb:Q19752
EnsemblMetazoa:F23B12.6.1 EnsemblMetazoa:F23B12.6.2
EnsemblMetazoa:F23B12.6.3 GeneID:179946 KEGG:cel:CELE_F23B12.6
UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6 InParanoid:Q19752
NextBio:907502 Uniprot:Q19752
Length = 401
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 92/298 (30%), Positives = 150/298 (50%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDE-EDVISWILKCQD 66
KH Y++ K S ++ R YWG+ L IL D E++I ++ C+
Sbjct: 65 KHASYLLRYLKNCPS-SYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEH 123
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA-DKVS--NYIVGLQNEDGSFSGDI 123
GG+ G G H+ T +AV L K + L + ++V+ N++ ++E G F
Sbjct: 124 PEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHE 183
Query: 124 WGEVDTRFSYIAICCLSILQR-LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
GE+D R +Y A+ I+ +D+I+ + E+I+SC++ +GGFG P E+H G FC
Sbjct: 184 GGEIDMRSAYCALATCEIVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIMID-- 239
V +L + D + L W RQ++ GG GR KL D CYS+W + ++D
Sbjct: 243 AVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGE 302
Query: 240 ---RVHWINKD-----KLVKFIL-DCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
+ K L ++IL CQ + +GG D+PD VD++HT + ++GLS+ +
Sbjct: 303 MEREGRSLEKGLFEARMLEEYILVGCQSV-HGGFKDKPDKPVDLYHTCYVLSGLSVAQ 359
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 54/220 (24%), Positives = 102/220 (46%)
Query: 49 LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSN- 107
L +++ + +++ KC+ ESGGF H+ + SA LA + V L D++SN
Sbjct: 157 LRSINRVTLFNFLKKCKHESGGF---YMHEGGEIDMRSAYCALATCEIVG-LPMDEISNG 212
Query: 108 ---YIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCK-NL 163
+I+ Q+ +G F G+ + E +++ A+ L +L R +++ + + +
Sbjct: 213 VAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRF 272
Query: 164 DGGF-GCT----PGGESH-SGQIFCCV-GALAIAGALHHVDKDLLGWWLCERQV----KS 212
+GGF G T G S G IF + G + G ++K L + E + +S
Sbjct: 273 EGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREG--RSLEKGLFEARMLEEYILVGCQS 330
Query: 213 --GGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLV 250
GG +P+K D+ ++ +VLS L + + K++
Sbjct: 331 VHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGKIL 370
>UNIPROTKB|Q19752 [details] [associations]
symbol:fntb-1 "Protein FNTB-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
GeneTree:ENSGT00550000075042 OMA:HPVYNIC HSSP:P49356 PIR:T21291
RefSeq:NP_506580.1 ProteinModelPortal:Q19752 IntAct:Q19752
STRING:Q19752 PaxDb:Q19752 EnsemblMetazoa:F23B12.6.1
EnsemblMetazoa:F23B12.6.2 EnsemblMetazoa:F23B12.6.3 GeneID:179946
KEGG:cel:CELE_F23B12.6 UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6
InParanoid:Q19752 NextBio:907502 Uniprot:Q19752
Length = 401
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 92/298 (30%), Positives = 150/298 (50%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDE-EDVISWILKCQD 66
KH Y++ K S ++ R YWG+ L IL D E++I ++ C+
Sbjct: 65 KHASYLLRYLKNCPS-SYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEH 123
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDA-DKVS--NYIVGLQNEDGSFSGDI 123
GG+ G G H+ T +AV L K + L + ++V+ N++ ++E G F
Sbjct: 124 PEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHE 183
Query: 124 WGEVDTRFSYIAICCLSILQR-LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFC 182
GE+D R +Y A+ I+ +D+I+ + E+I+SC++ +GGFG P E+H G FC
Sbjct: 184 GGEIDMRSAYCALATCEIVGLPMDEIS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFC 242
Query: 183 CVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVLSSLIMID-- 239
V +L + D + L W RQ++ GG GR KL D CYS+W + ++D
Sbjct: 243 AVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGE 302
Query: 240 ---RVHWINKD-----KLVKFIL-DCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
+ K L ++IL CQ + +GG D+PD VD++HT + ++GLS+ +
Sbjct: 303 MEREGRSLEKGLFEARMLEEYILVGCQSV-HGGFKDKPDKPVDLYHTCYVLSGLSVAQ 359
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 54/220 (24%), Positives = 102/220 (46%)
Query: 49 LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSN- 107
L +++ + +++ KC+ ESGGF H+ + SA LA + V L D++SN
Sbjct: 157 LRSINRVTLFNFLKKCKHESGGF---YMHEGGEIDMRSAYCALATCEIVG-LPMDEISNG 212
Query: 108 ---YIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCK-NL 163
+I+ Q+ +G F G+ + E +++ A+ L +L R +++ + + +
Sbjct: 213 VAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRF 272
Query: 164 DGGF-GCT----PGGESH-SGQIFCCV-GALAIAGALHHVDKDLLGWWLCERQV----KS 212
+GGF G T G S G IF + G + G ++K L + E + +S
Sbjct: 273 EGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREG--RSLEKGLFEARMLEEYILVGCQS 330
Query: 213 --GGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLV 250
GG +P+K D+ ++ +VLS L + + K++
Sbjct: 331 VHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGKIL 370
>FB|FBgn0015000 [details] [associations]
symbol:betaggt-I "beta subunit of type I geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004661
"protein geranylgeranyltransferase activity" evidence=ISS]
[GO:0007265 "Ras protein signal transduction" evidence=ISS]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=NAS] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0022008 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0035050 GO:GO:0004661
HSSP:P53610 EMBL:U43587 ProteinModelPortal:Q24172 SMR:Q24172
STRING:Q24172 PaxDb:Q24172 PRIDE:Q24172 FlyBase:FBgn0015000
InParanoid:Q24172 OrthoDB:EOG489333 ArrayExpress:Q24172 Bgee:Q24172
Uniprot:Q24172
Length = 395
Score = 317 (116.6 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 76/224 (33%), Positives = 114/224 (50%)
Query: 80 HVLYTLSAVQVLA-LFDKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T +++ VL L D + LD + + + +Q +GSFS I G E D RF Y A
Sbjct: 112 HLAMTYTSLAVLVTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCAAT 171
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVD 197
+L +N + ++I D GF GE+H G FC + AL ++G LH +D
Sbjct: 172 ICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLD 231
Query: 198 K---DLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFIL 254
+ + WL RQ+ G GRP K D CYS+W+ +SL +++ + + +FIL
Sbjct: 232 ATTVERMKRWLIFRQMD--GFQGRPNKPVDTCYSFWIGASLCILNGFELTDYARNREFIL 289
Query: 255 DCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
QD GG + P D FHTY G+ GL+ PGL P++P+
Sbjct: 290 STQDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGLSPVNPS 333
Score = 42 (19.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 29 EHLRLNGAYWGLTTLDILGKLDAVD---EEDVISWI 61
++ R ++ + LD+L L V +D+I WI
Sbjct: 34 DNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWI 69
>UNIPROTKB|F1SA56 [details] [associations]
symbol:CHURC1-FNTB "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:CU655896 Ensembl:ENSSSCT00000002539 Uniprot:F1SA56
Length = 336
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 81/252 (32%), Positives = 128/252 (50%)
Query: 57 VISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQ 113
V ++ CQ GGF G G PH+ T +AV L + + D+++ +K+ Y+ L+
Sbjct: 25 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLK 84
Query: 114 NEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGG 173
DGSF + GEVD R +Y A S+ + + E+I C+N +GG G PG
Sbjct: 85 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGVPGM 144
Query: 174 ESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVL 232
E+H G FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W
Sbjct: 145 EAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 204
Query: 233 SSLIMIDR-VH-----------WI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYF 279
L ++ R +H W+ ++ L ++IL C GG+ D+P + D +HT +
Sbjct: 205 GLLPLLHRALHAQGDPALSMSRWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCY 264
Query: 280 GVAGLSLLEYPG 291
++GLS+ ++ G
Sbjct: 265 CLSGLSIAQHFG 276
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 105 VSNYIVGLQNEDGSFSGDI--WGEVDTRFSYI-AICCLSILQRLDKINVDKAVEYIVSCK 161
V ++ Q+ +G F G + + ++ + A+C + + D IN +K ++Y+ S K
Sbjct: 25 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLK 84
Query: 162 NLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLL-GW--WLCERQVKSGGLNGR 218
DG F GGE +C A ++A + V DL G W+ Q GG+ G
Sbjct: 85 QPDGSFLMHVGGEVDVRSAYC---AASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGV 141
Query: 219 PEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTY 278
P Y++ L++L+++ + +N L++++ Q GG R + VD +++
Sbjct: 142 PGMEAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSF 201
Query: 279 FGVAGLSLLEYPGLKPIDPAYAL 301
+ L LL DPA ++
Sbjct: 202 WQAGLLPLLHRALHAQGDPALSM 224
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 47/199 (23%), Positives = 77/199 (38%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQD 66
+K ++Y+ S+++ SF V + + AY + + + E WI +CQ+
Sbjct: 74 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIVTPDLFEGTAEWIARCQN 133
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNE-DGSFSGDIWG 125
GG G G + H YT + L + K L+ + ++ Q +G F G
Sbjct: 134 WEGGIGGVPGMEAHGGYTFCGLAALVILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNK 193
Query: 126 EVDTRFSYIAICCLSILQRLDKINVDKAV-------------EYIVSCKNLDGGFGCTPG 172
VD +S+ L +L R D A+ EYI+ C G
Sbjct: 194 LVDGCYSFWQAGLLPLLHRALHAQGDPALSMSRWMFHQQALQEYILMCCQCPAGGLLDKP 253
Query: 173 GESHSGQIFC-CVGALAIA 190
G+S C C+ L+IA
Sbjct: 254 GKSRDFYHTCYCLSGLSIA 272
>UNIPROTKB|F1N4H5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152
GeneTree:ENSGT00530000063392 IPI:IPI00715065 OMA:FILSTQD
EMBL:DAAA02027677 EMBL:DAAA02027678 EMBL:DAAA02027679
EMBL:DAAA02027680 Ensembl:ENSBTAT00000002466 Uniprot:F1N4H5
Length = 377
Score = 263 (97.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 71/225 (31%), Positives = 107/225 (47%)
Query: 80 HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSFSGDIWG-EVDTRFSYIAIC 137
H+ T + + L + D + ++ + + LQ EDGSF G E D RF Y A C
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 138 CLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHV- 196
+L +++ KA+ YI + D G G ESH G FC + +L + G L V
Sbjct: 181 ICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVF 240
Query: 197 -DKDL--LGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFI 253
+K+L + W RQ G +GRP K D CYS+WV ++L + + + N + I
Sbjct: 241 SEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKVREIIKMRNFESNKTSI 298
Query: 254 LDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPA 298
+ Q+ G + D H YFG+ GLSL+E G+ + PA
Sbjct: 299 ISIQEKILGAFLYWCNSHSDALHAYFGICGLSLMEESGICKVHPA 343
Score = 89 (36.4 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQ 65
D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI Q
Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQ 80
>FB|FBgn0038424 [details] [associations]
symbol:CG17565 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 EMBL:AE014297
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004663 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:AY051869 RefSeq:NP_650540.1 UniGene:Dm.4459 HSSP:Q02293
SMR:Q9VEV7 STRING:Q9VEV7 EnsemblMetazoa:FBtr0083286 GeneID:41989
KEGG:dme:Dmel_CG17565 UCSC:CG17565-RA FlyBase:FBgn0038424
InParanoid:Q9VEV7 OrthoDB:EOG4NP5JX GenomeRNAi:41989 NextBio:826605
Uniprot:Q9VEV7
Length = 419
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 79/271 (29%), Positives = 133/271 (49%)
Query: 37 YWGLTTLDILG-KLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFD 95
YW L +L D V+ ++ C+ +GGF G G H+ T +AV L +
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 96 KVDI---LDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDK 152
+D + ++ +++ DGSF + GE D R +Y AI C +L + + +
Sbjct: 152 SEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKEL 211
Query: 153 AV---EYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQ 209
++I C+ +GGFG PG E+H G FC + LA+ D+ L W RQ
Sbjct: 212 FAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQ 271
Query: 210 VK-SGGLNGRPEKLPDVCYSWWV-------LSSLIMIDRV--HWI-NKDKLVKFILDCQD 258
+ GG GR KL D CYS+WV ++L +D+ H + + + L ++IL C
Sbjct: 272 MTYEGGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQ 331
Query: 259 MENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
++GG+ D+P D++HT + ++G+S+ ++
Sbjct: 332 KQSGGLIDKPGKPQDLYHTCYTLSGVSIAQH 362
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 62/272 (22%), Positives = 112/272 (41%)
Query: 15 SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGN 74
SVEK D FE ++ RL + L+ LDA+ ++ +C D S +
Sbjct: 39 SVEKCFDRFEQIMFTDPRLTQIF----RLEHQYYLDAMLRRLPSNY--ECLDSSRAWC-- 90
Query: 75 IGHDPHVLYTLSAVQVLAL-FDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSY 133
V + L A Q+L+ FD + + V ++ ++ G F G +Y
Sbjct: 91 ------VYWILQAAQLLSFNFDDQTL---NHVVQFLSNCRSPTGGFGGGPGQYAHLAPTY 141
Query: 134 IAICCLSIL---QRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIA 190
A+ L I+ Q I+ V+++ S ++ DG F GE+ +C + +
Sbjct: 142 AAVNSLCIIGSEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLL 201
Query: 191 GALHHVDKDLL---GWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKD 247
V K+L G W+ + Q GG G P Y++ ++ L +++ ++
Sbjct: 202 NLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQ 261
Query: 248 KLVKFILDCQDMENGGISDRPDDAVDVFHTYF 279
L+K+ L Q GG R + VD ++++
Sbjct: 262 ALLKWTLRRQMTYEGGFQGRTNKLVDGCYSFW 293
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/178 (27%), Positives = 75/178 (42%)
Query: 10 VKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVISWILKCQD 66
V+++ SV SF V + GAY ++ +L + V +E WI +CQ
Sbjct: 165 VQFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQT 224
Query: 67 ESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQ-NEDGSFSGDIWG 125
GGF G G + H YT + LAL ++ D D + + + Q +G F G
Sbjct: 225 YEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNK 284
Query: 126 EVDTRFSYIAICCLSILQR----LDK------INVDKAVEYIV-SCKNLDGGFGCTPG 172
VD +S+ + I Q +DK +V+ EYI+ C+ GG PG
Sbjct: 285 LVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEALQEYILLCCQKQSGGLIDKPG 342
>GENEDB_PFALCIPARUM|PF11_0483 [details] [associations]
symbol:PF11_0483 "farnesyltransferase beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004660 "protein
farnesyltransferase activity" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 271 (100.5 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 78/258 (30%), Positives = 125/258 (48%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVIS 59
+L H K+ + + K+ + + +E + YW + ++ IL ++E+
Sbjct: 422 QLEKQLHFKFCLDIFFLKN-MKLISLEASKPWIFYWCIHSIHILYNTFEIEEKIGKPTFD 480
Query: 60 WILKC--------QDESGGFAGNIGHDPHVLYTLSAVQV-LALFDK----VDILDADKVS 106
+I KC ++ GGF G + H+ T +AV V + L D+ + LD K+
Sbjct: 481 YIKKCVFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLH 540
Query: 107 NYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVE-YIVSCKNLDG 165
+YI+ L+ DGSF I GE+D R +Y AI S+ L V K VE YI++C+N +G
Sbjct: 541 SYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTN-EVKKNVEKYILTCQNYEG 599
Query: 166 GFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPD 224
GF E H G +C + L I G ++ ++ L WL +Q G GR KL D
Sbjct: 600 GFTSEKFQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVD 659
Query: 225 VCYSWWVLSSLIMIDRVH 242
CYS+W+ S +I ++
Sbjct: 660 SCYSFWMGSIFFLIYEIY 677
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 48/211 (22%), Positives = 86/211 (40%)
Query: 77 HDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAI 136
H H+LY ++ D + V Y+ ++N DG F G + +Y A+
Sbjct: 459 HSIHILYNTFEIEEKIGKPTFDYIKKC-VFLYLNKIKNNDGGFGGGLNQYTHIATTYAAV 517
Query: 137 CCLSILQR-----LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAG 191
C L L ++ K YI+ K DG F GE +C + ++
Sbjct: 518 CVFIYLHDEENNFLSFLDKKKLHSYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCH 577
Query: 192 ALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVC---YSWWVLSSLIMIDRVHWINKDK 248
L + K + ++ Q GG EK + C YS+ L++L ++ +V+ IN
Sbjct: 578 ILTNEVKKNVEKYILTCQNYEGGFTS--EKFQE-CHGGYSYCALATLCILGKVNKINLKN 634
Query: 249 LVKFILDCQDMENGGISDRPDDAVDVFHTYF 279
L ++++ Q G R + VD ++++
Sbjct: 635 LTHWLMNKQSNIEGAFMGRTNKLVDSCYSFW 665
Score = 88 (36.0 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 245 NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
N++ L ++ C GG+ D+P + +D +HT + ++GLSL++
Sbjct: 807 NENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQ 850
>UNIPROTKB|Q8IHP6 [details] [associations]
symbol:PF11_0483 "Farnesyltransferase beta subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004660
"protein farnesyltransferase activity" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 271 (100.5 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 78/258 (30%), Positives = 125/258 (48%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE---DVIS 59
+L H K+ + + K+ + + +E + YW + ++ IL ++E+
Sbjct: 422 QLEKQLHFKFCLDIFFLKN-MKLISLEASKPWIFYWCIHSIHILYNTFEIEEKIGKPTFD 480
Query: 60 WILKC--------QDESGGFAGNIGHDPHVLYTLSAVQV-LALFDK----VDILDADKVS 106
+I KC ++ GGF G + H+ T +AV V + L D+ + LD K+
Sbjct: 481 YIKKCVFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLH 540
Query: 107 NYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDKAVE-YIVSCKNLDG 165
+YI+ L+ DGSF I GE+D R +Y AI S+ L V K VE YI++C+N +G
Sbjct: 541 SYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTN-EVKKNVEKYILTCQNYEG 599
Query: 166 GFGCTPGGESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPD 224
GF E H G +C + L I G ++ ++ L WL +Q G GR KL D
Sbjct: 600 GFTSEKFQECHGGYSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVD 659
Query: 225 VCYSWWVLSSLIMIDRVH 242
CYS+W+ S +I ++
Sbjct: 660 SCYSFWMGSIFFLIYEIY 677
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 48/211 (22%), Positives = 86/211 (40%)
Query: 77 HDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAI 136
H H+LY ++ D + V Y+ ++N DG F G + +Y A+
Sbjct: 459 HSIHILYNTFEIEEKIGKPTFDYIKKC-VFLYLNKIKNNDGGFGGGLNQYTHIATTYAAV 517
Query: 137 CCLSILQR-----LDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAG 191
C L L ++ K YI+ K DG F GE +C + ++
Sbjct: 518 CVFIYLHDEENNFLSFLDKKKLHSYILKLKCTDGSFRVHINGEIDMRGTYCAISICSMCH 577
Query: 192 ALHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVC---YSWWVLSSLIMIDRVHWINKDK 248
L + K + ++ Q GG EK + C YS+ L++L ++ +V+ IN
Sbjct: 578 ILTNEVKKNVEKYILTCQNYEGGFTS--EKFQE-CHGGYSYCALATLCILGKVNKINLKN 634
Query: 249 LVKFILDCQDMENGGISDRPDDAVDVFHTYF 279
L ++++ Q G R + VD ++++
Sbjct: 635 LTHWLMNKQSNIEGAFMGRTNKLVDSCYSFW 665
Score = 88 (36.0 bits), Expect = 7.7e-29, Sum P(2) = 7.7e-29
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 245 NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
N++ L ++ C GG+ D+P + +D +HT + ++GLSL++
Sbjct: 807 NENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQ 850
>UNIPROTKB|O18197 [details] [associations]
symbol:Y48E1B.3 "Protein Y48E1B.3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152 EMBL:Z93393
GeneTree:ENSGT00530000063392 HOGENOM:HOG000180333 KO:K11713
HSSP:P53610 OMA:FILSTQD GeneID:174999 KEGG:cel:CELE_Y48E1B.3
CTD:174999 PIR:T27022 RefSeq:NP_001254397.1
ProteinModelPortal:O18197 SMR:O18197 DIP:DIP-26836N IntAct:O18197
MINT:MINT-1088947 EnsemblMetazoa:Y48E1B.3a UCSC:Y48E1B.3
WormBase:Y48E1B.3a NextBio:886354 ArrayExpress:O18197
Uniprot:O18197
Length = 360
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 79/249 (31%), Positives = 126/249 (50%)
Query: 74 NIGHDP-HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSF-SGDIWGEVDTR 130
N G+D ++ T SA+ LA+ D + +D + + Q ++G F S + E D R
Sbjct: 108 NSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMR 167
Query: 131 FSYIAICCLSILQRLDKINVD--KAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALA 188
F + A+ IL + +D K ++ N+DGG G PG ESH G FC + +LA
Sbjct: 168 FVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLA 227
Query: 189 IAGAL--HHV----DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVH 242
++ L V D D L W ++Q G +GR K D CY++W+ ++L +++ H
Sbjct: 228 LSNRLWTEEVLTRRDIDRLIRWAIQKQ--DIGFHGRAHKPDDSCYAFWIGATLKILNAYH 285
Query: 243 WINKDKLVKFILDCQDMENGGISDRPDDA--VDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
++K L +F++ CQ GG P+ D+ HTYF +A LSLL P + P+ P+
Sbjct: 286 LVSKQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSLLGEPAVNPVHPSLN 345
Query: 301 LPVDVVNRI 309
+ + V RI
Sbjct: 346 VSMRVAERI 354
>WB|WBGene00013002 [details] [associations]
symbol:Y48E1B.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR001330
Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0008152 EMBL:Z93393 GeneTree:ENSGT00530000063392 KO:K11713
GeneID:174999 KEGG:cel:CELE_Y48E1B.3 CTD:174999
RefSeq:NP_001254398.1 ProteinModelPortal:B7WNB1 SMR:B7WNB1
EnsemblMetazoa:Y48E1B.3c.1 EnsemblMetazoa:Y48E1B.3c.2
WormBase:Y48E1B.3c ArrayExpress:B7WNB1 Uniprot:B7WNB1
Length = 883
Score = 311 (114.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 79/249 (31%), Positives = 126/249 (50%)
Query: 74 NIGHDP-HVLYTLSAVQVLALF-DKVDILDADKVSNYIVGLQNEDGSF-SGDIWGEVDTR 130
N G+D ++ T SA+ LA+ D + +D + + Q ++G F S + E D R
Sbjct: 631 NSGYDEANLAQTYSALLSLAILGDDLKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMR 690
Query: 131 FSYIAICCLSILQRLDKINVD--KAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALA 188
F + A+ IL + +D K ++ N+DGG G PG ESH G FC + +LA
Sbjct: 691 FVFCAVAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLA 750
Query: 189 IAGAL--HHV----DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVH 242
++ L V D D L W ++Q G +GR K D CY++W+ ++L +++ H
Sbjct: 751 LSNRLWTEEVLTRRDIDRLIRWAIQKQ--DIGFHGRAHKPDDSCYAFWIGATLKILNAYH 808
Query: 243 WINKDKLVKFILDCQDMENGGISDRPDDA--VDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
++K L +F++ CQ GG P+ D+ HTYF +A LSLL P + P+ P+
Sbjct: 809 LVSKQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSLLGEPAVNPVHPSLN 868
Query: 301 LPVDVVNRI 309
+ + V RI
Sbjct: 869 VSMRVAERI 877
>ASPGD|ASPL0000050108 [details] [associations]
symbol:AN2002 species:162425 "Emericella nidulans"
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0010958 "regulation of amino acid
import" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 EMBL:BN001307
GO:GO:0042127 GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 ProteinModelPortal:C8VLC9
EnsemblFungi:CADANIAT00008669 OMA:CEGGEED Uniprot:C8VLC9
Length = 519
Score = 239 (89.2 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
Identities = 75/251 (29%), Positives = 112/251 (44%)
Query: 4 LAADKHVKYII-SVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWIL 62
L D H+ Y+ S+E F V M+ R YW L L +LG+ + E I+ I
Sbjct: 122 LMRDVHIGYLCDSLEDYPPGF--VAMDASRPWMIYWALAALSLLGEDLSRHRERAIATIT 179
Query: 63 KCQDESGGFAGNIGHDPHVLYTLSAVQVLALF---DKVDILDADKVSNYIVGLQNEDGSF 119
Q+ +GGF G G H + +AV LA+ + +++D + ++ L+ DG
Sbjct: 180 PMQNPTGGFGGGHGQISHCASSYAAVLSLAMVGGEEAFNLIDRQAMWKWLGKLKQPDGGI 239
Query: 120 SGDIWGEVDTRFSYIAICCLSILQ---------RLDKINV----DKAVEYIVSCKNLDGG 166
+ GE D R +Y A+ +S+L + + + D EY+ C+ +GG
Sbjct: 240 TVCEGGEEDVRGAYCAMVIISLLNLPLTLPPEAKAREYGLETFTDGLWEYLSRCQTFEGG 299
Query: 167 FGCTPGGESHSGQIFCCVGALAIAGALHH-----VDKDLLGWWLCERQ-VKSGGLNGRPE 220
+PG E+H FC + L I G +D +L WL RQ GG GR
Sbjct: 300 ISGSPGSEAHGAYAFCALACLCILGEPEATIPKCMDVQMLLSWLSARQYAPEGGFAGRTN 359
Query: 221 KLPDVCYSWWV 231
KL D CYS WV
Sbjct: 360 KLVDGCYSHWV 370
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 196 VDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSS--LIM--IDRV--------- 241
+D +L WL RQ GG GR KL D CYS WV S LI +D V
Sbjct: 334 MDVQMLLSWLSARQYAPEGGFAGRTNKLVDGCYSHWVGSCWPLIQSALDGVQDAAGPKPA 393
Query: 242 --HWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
+ +++ L ++IL C +NGG+ D+P D +HT + + GLS +++
Sbjct: 394 VGNLYSREGLTRYILGCCQSKNGGLRDKPGKHPDSYHTCYTLTGLSSVQH 443
Score = 65 (27.9 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 209 QVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLV 250
Q K+GGL +P K PD ++ + L+ L + H+ +V
Sbjct: 412 QSKNGGLRDKPGKHPDSYHTCYTLTGLSSVQHYHYHTNSSVV 453
>POMBASE|SPAC2E1P5.04c [details] [associations]
symbol:cwg2 "geranylgeranyltransferase I beta subunit
Cwg2" species:4896 "Schizosaccharomyces pombe" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=NAS]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0009250 "glucan biosynthetic process" evidence=IMP] [GO:0018344
"protein geranylgeranylation" evidence=IC] [GO:0034411 "cell wall
(1->3)-beta-D-glucan biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071963
"establishment or maintenance of cell polarity regulating cell
shape" evidence=IMP] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR001330 Pfam:PF00432
PomBase:SPAC2E1P5.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006612 GO:GO:0071963 GO:GO:0034411
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180333 KO:K11713 EMBL:Z12155 PIR:S41686
RefSeq:NP_594142.1 ProteinModelPortal:P32434 STRING:P32434
EnsemblFungi:SPAC2E1P5.04c.1 GeneID:2541514 KEGG:spo:SPAC2E1P5.04c
OMA:HDLRFCY OrthoDB:EOG4WQ4BS NextBio:20802612 Uniprot:P32434
Length = 355
Score = 171 (65.3 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 204 WLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGG 263
WL RQ+ SGGLNGR K D CY++WVLSSL ++D + +I+ +L K++L GG
Sbjct: 240 WLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLLLHAQHALGG 299
Query: 264 ISDRPDDAVDVFHTYFGVAGLS 285
S P + DV H+ G+ ++
Sbjct: 300 FSKTPGEFPDVLHSALGLYAMA 321
Score = 117 (46.2 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 78 DPHVLYTLSAVQ-VLALFDKVDILDADKVSNYIVGLQNEDGSFSG---DIWGEVDTRFSY 133
+P + T+ ++ +L L D + +D D + N++ + G F + D R Y
Sbjct: 94 EPQLAGTVFSICCLLFLGDNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLY 153
Query: 134 IAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAI 189
+A S+L + +++YI SC+ +GGF P GE+H+G FC + + ++
Sbjct: 154 MATTIASLLD-FSLSDPLCSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSL 208
Score = 65 (27.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 3 ELAADKHVKYIISVEKKKDSFESVVMEH--LRLNGAYWGLTTLDILGKLDAVDEEDV--- 57
EL KH+ + ++ F + EH R A++ L LD+L L+ +D++D
Sbjct: 2 ELTRAKHIAFF---KRHLILFPTPYEEHDCERTVLAFFCLLGLDLLNALNTIDDDDKKSW 58
Query: 58 ISWILK--CQDESGG--FAG-----------NIGHDPHVLYTLSAVQ-VLALFDKVDILD 101
I WI K ES G ++G + +P + T+ ++ +L L D + +D
Sbjct: 59 IEWIYKNYVTKESKGIKYSGFQAYRTGIQPISFEQEPQLAGTVFSICCLLFLGDNLSRID 118
Query: 102 ADKVSNYIVGLQNEDGSF 119
D + N++ + G F
Sbjct: 119 RDLIKNFVELCKTSQGHF 136
Score = 62 (26.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 31/145 (21%), Positives = 59/145 (40%)
Query: 8 KHVKYIISVEKKKDSFESVVMEHL-RLNGAYWGLTTLDILG-KLDAVDEEDVISWILKCQ 65
K +KY + + + + E +L G + + L LG L +D + + +++ C+
Sbjct: 72 KGIKYS-GFQAYRTGIQPISFEQEPQLAGTVFSICCLLFLGDNLSRIDRDLIKNFVELCK 130
Query: 66 DESGGFAGNI-----GHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFS 120
G F D LY + + L F D L + + YI Q +G FS
Sbjct: 131 TSQGHFRSIAVPSCSDQDMRQLYMATTIASLLDFSLSDPLCSIQ---YIKSCQRYEGGFS 187
Query: 121 GDIWGEVDTRFSYIAICCLSILQRL 145
+GE ++ A+ S++ ++
Sbjct: 188 LLPYGEAHAGATFCALASWSLILKM 212
Score = 58 (25.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 11/42 (26%), Positives = 27/42 (64%)
Query: 247 DKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLE 288
++L++++ Q + +GG++ R + VD + Y+ ++ L LL+
Sbjct: 235 ERLIRWLASRQ-LSSGGLNGRTNKDVDTCYAYWVLSSLKLLD 275
Score = 38 (18.4 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 181 FCCVGALAIAGALHHVDKDLLGWWL 205
FC +G L + AL+ +D D W+
Sbjct: 36 FCLLG-LDLLNALNTIDDDDKKSWI 59
>SGD|S000003123 [details] [associations]
symbol:CDC43 "Beta subunit of geranylgeranyltransferase type
I" species:4932 "Saccharomyces cerevisiae" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=TAS] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=TAS] [GO:0004661
"protein geranylgeranyltransferase activity" evidence=IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030010 "establishment of cell polarity"
evidence=TAS] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 SGD:S000003123
GO:GO:0007264 EMBL:BK006941 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006874 GO:GO:0030010 EMBL:Z48618
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
HOGENOM:HOG000180333 KO:K11713 OrthoDB:EOG4WQ4BS EMBL:M31114
EMBL:M74109 EMBL:Z72677 PIR:A40875 RefSeq:NP_011360.1
ProteinModelPortal:P18898 SMR:P18898 DIP:DIP-1232N IntAct:P18898
MINT:MINT-396220 STRING:P18898 PaxDb:P18898 PeptideAtlas:P18898
EnsemblFungi:YGL155W GeneID:852722 KEGG:sce:YGL155W CYGD:YGL155w
OMA:TCYSWWC NextBio:972105 Genevestigator:P18898 GermOnline:YGL155W
Uniprot:P18898
Length = 376
Score = 129 (50.5 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 209 QVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW--INKDKLV-KFILD-CQDMENGGI 264
Q GG GR K D CY++W L+SL ++ + W + + +LV ++LD Q GG
Sbjct: 271 QSDDGGFQGRENKFADTCYAFWCLNSLHLLTK-DWKMLCQTELVTNYLLDRTQKTLTGGF 329
Query: 265 SDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPVDVVNRIFFSKK 314
S ++ D++H+ G A L+L+E G + +P ++ N FSK+
Sbjct: 330 SKNDEEDADLYHSCLGSAALALIE--G--KFNGELCIPQEIFND--FSKR 373
Score = 120 (47.3 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 48/157 (30%), Positives = 74/157 (47%)
Query: 79 PHVLYTLSAVQVLALFDKVD-ILDADKVSNYIVGLQNED-GSF---------SGDIWGEV 127
P+ L+ L ++ +L ++ + ILD ++ ++ Q D GSF G
Sbjct: 104 PNTLFALLSMIMLRDYEYFETILDKRSLARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSD 163
Query: 128 DTRFSYIAICCLSIL-----QRLDK-INVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIF 181
D RF YIA+ L I + D+ I+ +K + YI+S + +G FG E HSG
Sbjct: 164 DLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQCYNGAFGAH--NEPHSGYTS 221
Query: 182 CCVGALAIAGALHHV-DK---DLLGWWLCERQVKSGG 214
C + LA+ +L + DK D + W L RQV S G
Sbjct: 222 CALSTLALLSSLEKLSDKFKEDTITW-LLHRQVSSHG 257
Score = 73 (30.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 12 YIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILG---KLDA---VDEEDVISWILKCQ 65
++ ++ K + SV + LR Y + L I G K D +D E ++ +I+ Q
Sbjct: 146 FVSCLDYKTNCGSSVDSDDLRF--CYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQQ 203
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVS-NYIVGLQNEDGSFSGDIW 124
+G F + ++PH YT A+ LAL ++ L +DK + I L + S G +
Sbjct: 204 CYNGAFGAH--NEPHSGYTSCALSTLALLSSLEKL-SDKFKEDTITWLLHRQVSSHGCMK 260
Query: 125 GEVDTRFSY 133
E + SY
Sbjct: 261 FESELNASY 269
Score = 54 (24.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDE---EDVISWILK 63
+K + YI+S + +F + H L+TL +L L+ + + ED I+W+L
Sbjct: 193 EKLLGYIMSQQCYNGAFGAHNEPHSGYTSC--ALSTLALLSSLEKLSDKFKEDTITWLLH 250
Query: 64 CQDESGG 70
Q S G
Sbjct: 251 RQVSSHG 257
>CGD|CAL0001670 [details] [associations]
symbol:RAM1 species:5476 "Candida albicans" [GO:0018342
"protein prenylation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0010958
"regulation of amino acid import" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 CGD:CAL0001670
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0018342
PANTHER:PTHR11774:SF6 EMBL:AACQ01000259 RefSeq:XP_710548.1
ProteinModelPortal:Q59LD0 STRING:Q59LD0 GeneID:3647859
KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 150 (57.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 195 HVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWV-----LSSLIMID--------- 239
++D + L W RQ + GG++GR KL D CY +W+ L LI++D
Sbjct: 401 NIDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQLIIMDFSQGQGQQQ 460
Query: 240 RVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
V +++KL +++L E+GG D+P VD +HT + ++GLS+LE+
Sbjct: 461 EVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEH 510
Score = 94 (38.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 30/138 (21%), Positives = 62/138 (44%)
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIW- 124
D GG +GH + + + ++ +D L + + ++++ L+ SG +
Sbjct: 241 DGIGGGNNQLGHLASTYAAILTLILTDQYELLDNL-RELIRDWLLTLKKRSSCGSGASFI 299
Query: 125 ----GEVDTRFSYIAICCLSIL------------QRLDKINVDKAVEYIVSCKNLDGGFG 168
GE+D R +Y A+ +++L + LD + +D ++ SC+ +GGF
Sbjct: 300 MHENGEMDARSTYCALIIINLLNLTNYEENSSSPEELDPL-IDGVENWLNSCQTYEGGFS 358
Query: 169 CTPGGESHSGQIFCCVGA 186
P E+H G +C + +
Sbjct: 359 NIPNTEAHGGYTYCALAS 376
Score = 71 (30.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 37/164 (22%), Positives = 74/164 (45%)
Query: 7 DKHVKYIIS--VEKKKDSFESVVMEHLRLNGAYWGLTTLDIL-GKLDAVDEE--D-VISW 60
D H+KYI+S ++ ++ + + H + YW L + ++ +++ D +++
Sbjct: 167 DAHLKYILSSLIDPMPSGYQVLDVNHSWM--IYWLLNSYYLIQNPTMEINQSILDLIVNK 224
Query: 61 ILKC---QDE-SG----GFAGNIGHDPHVLYTLSAVQVLALFDKVDILD--ADKVSNYIV 110
I KC D SG G G H+ T +A+ L L D+ ++LD + + ++++
Sbjct: 225 ITKCINYGDSLSGVPFDGIGGGNNQLGHLASTYAAILTLILTDQYELLDNLRELIRDWLL 284
Query: 111 GLQNED--GSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDK 152
L+ GS + I E + C L I+ L+ N ++
Sbjct: 285 TLKKRSSCGSGASFIMHENGEMDARSTYCALIIINLLNLTNYEE 328
Score = 65 (27.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 197 DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKD---KLVKFI 253
++ L + L Q +SGG +P K D ++ + LS L +++ + ++D + + F
Sbjct: 467 EEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFSQDDEGRSLAFQ 526
Query: 254 LDCQ--DMENGGISDRPDDAVDVFHTYFGVAGLSLL----EYPGLKPI 295
+D + + E GG D+ + H FG+ + + +Y LKPI
Sbjct: 527 IDVEREEEERGG-GRGGDNFTNPIHPVFGIP-IKFVKKCHDYFKLKPI 572
Score = 52 (23.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 55 EDVISWILKCQDESGGFAGNIGHDPHVLYTLSAV 88
+ V +W+ CQ GGF+ + H YT A+
Sbjct: 341 DGVENWLNSCQTYEGGFSNIPNTEAHGGYTYCAL 374
Score = 42 (19.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSIL 142
+++D L D V N++ Q +G FS E ++Y A+ +L
Sbjct: 334 EELDPL-IDGVENWLNSCQTYEGGFSNIPNTEAHGGYTYCALASYFLL 380
>UNIPROTKB|Q59LD0 [details] [associations]
symbol:RAM1 "Putative uncharacterized protein RAM1"
species:237561 "Candida albicans SC5314" [GO:0018342 "protein
prenylation" evidence=NAS] InterPro:IPR001330 InterPro:IPR026872
Pfam:PF00432 CGD:CAL0001670 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343 eggNOG:COG5029
GO:GO:0005965 GO:GO:0018342 PANTHER:PTHR11774:SF6 EMBL:AACQ01000259
RefSeq:XP_710548.1 ProteinModelPortal:Q59LD0 STRING:Q59LD0
GeneID:3647859 KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 150 (57.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 195 HVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWV-----LSSLIMID--------- 239
++D + L W RQ + GG++GR KL D CY +W+ L LI++D
Sbjct: 401 NIDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQLIIMDFSQGQGQQQ 460
Query: 240 RVHWINKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
V +++KL +++L E+GG D+P VD +HT + ++GLS+LE+
Sbjct: 461 EVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEH 510
Score = 94 (38.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 30/138 (21%), Positives = 62/138 (44%)
Query: 66 DESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNYIVGLQNEDGSFSGDIW- 124
D GG +GH + + + ++ +D L + + ++++ L+ SG +
Sbjct: 241 DGIGGGNNQLGHLASTYAAILTLILTDQYELLDNL-RELIRDWLLTLKKRSSCGSGASFI 299
Query: 125 ----GEVDTRFSYIAICCLSIL------------QRLDKINVDKAVEYIVSCKNLDGGFG 168
GE+D R +Y A+ +++L + LD + +D ++ SC+ +GGF
Sbjct: 300 MHENGEMDARSTYCALIIINLLNLTNYEENSSSPEELDPL-IDGVENWLNSCQTYEGGFS 358
Query: 169 CTPGGESHSGQIFCCVGA 186
P E+H G +C + +
Sbjct: 359 NIPNTEAHGGYTYCALAS 376
Score = 71 (30.1 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 37/164 (22%), Positives = 74/164 (45%)
Query: 7 DKHVKYIIS--VEKKKDSFESVVMEHLRLNGAYWGLTTLDIL-GKLDAVDEE--D-VISW 60
D H+KYI+S ++ ++ + + H + YW L + ++ +++ D +++
Sbjct: 167 DAHLKYILSSLIDPMPSGYQVLDVNHSWM--IYWLLNSYYLIQNPTMEINQSILDLIVNK 224
Query: 61 ILKC---QDE-SG----GFAGNIGHDPHVLYTLSAVQVLALFDKVDILD--ADKVSNYIV 110
I KC D SG G G H+ T +A+ L L D+ ++LD + + ++++
Sbjct: 225 ITKCINYGDSLSGVPFDGIGGGNNQLGHLASTYAAILTLILTDQYELLDNLRELIRDWLL 284
Query: 111 GLQNED--GSFSGDIWGEVDTRFSYIAICCLSILQRLDKINVDK 152
L+ GS + I E + C L I+ L+ N ++
Sbjct: 285 TLKKRSSCGSGASFIMHENGEMDARSTYCALIIINLLNLTNYEE 328
Score = 65 (27.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 197 DKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKD---KLVKFI 253
++ L + L Q +SGG +P K D ++ + LS L +++ + ++D + + F
Sbjct: 467 EEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFSQDDEGRSLAFQ 526
Query: 254 LDCQ--DMENGGISDRPDDAVDVFHTYFGVAGLSLL----EYPGLKPI 295
+D + + E GG D+ + H FG+ + + +Y LKPI
Sbjct: 527 IDVEREEEERGG-GRGGDNFTNPIHPVFGIP-IKFVKKCHDYFKLKPI 572
Score = 52 (23.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 55 EDVISWILKCQDESGGFAGNIGHDPHVLYTLSAV 88
+ V +W+ CQ GGF+ + H YT A+
Sbjct: 341 DGVENWLNSCQTYEGGFSNIPNTEAHGGYTYCAL 374
Score = 42 (19.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 95 DKVDILDADKVSNYIVGLQNEDGSFSGDIWGEVDTRFSYIAICCLSIL 142
+++D L D V N++ Q +G FS E ++Y A+ +L
Sbjct: 334 EELDPL-IDGVENWLNSCQTYEGGFSNIPNTEAHGGYTYCALASYFLL 380
>ASPGD|ASPL0000027483 [details] [associations]
symbol:AN5760 species:162425 "Emericella nidulans"
[GO:0018344 "protein geranylgeranylation" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152 EMBL:BN001305
HOGENOM:HOG000180333 EnsemblFungi:CADANIAT00003299 OMA:PDLYHSY
Uniprot:C8VFH7
Length = 446
Score = 137 (53.3 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 207 ERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWINKDKLVKFILDCQDMENGGISD 266
E ++ G NGR K D CYS+W ++L M+ R+ ++ ++ +++L GG
Sbjct: 334 EESLQWAGFNGRCNKYADTCYSFWNAATLDMLGRLSMVDAERNRRYLLQKTQHLVGGFGK 393
Query: 267 RPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYALPVDVVNRI 309
+ D+ H+YFG+ L+ GL +D A V R+
Sbjct: 394 SVGELPDLLHSYFGMVSLAFQGEQGLDSVDSALCATHRTVRRL 436
Score = 79 (32.9 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 7 DKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAV----DEEDVISWIL 62
D+HV + + K + R+ A++ + LD+LG L++ + + I WI
Sbjct: 9 DRHVTFFLRCLKTFLPGLYTSNDSNRMLLAFFIVAGLDLLGALESKTTPEERQGYIEWIY 68
Query: 63 KCQDESGGFAGNIGHD 78
+CQ SGGF G G D
Sbjct: 69 QCQVPSGGFRGFTGTD 84
Score = 61 (26.5 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 24/74 (32%), Positives = 32/74 (43%)
Query: 142 LQRLDKINVDKAVEYIVSCK----N------------LDGGFGCTPGGESHSGQIFCCVG 185
L ++ I+V K V +IVSC+ N DGG P E+HSG +C V
Sbjct: 178 LDGIEDIDVGKLVAFIVSCQVRFYNPLYVIFTESVQAYDGGMAEGPYCEAHSGHTYCAVN 237
Query: 186 ALAIAGALHHVDKD 199
L L+ V D
Sbjct: 238 TLTF---LNRVSDD 248
Score = 59 (25.8 bits), Expect = 4.6e-11, Sum P(3) = 4.6e-11
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 24 ESVVMEHLRLNGAYWGLTTLDILGK-LDAVDEEDVISWILKCQDESGGFAGNIGHDPHV 81
E+ + + ++ L L ILG L V + + W+ K Q +G F +G D V
Sbjct: 93 ENEAWDPANVPSTFFALVILLILGDDLSRVKRTECLKWLRKMQRPNGSFGEVLGPDESV 151
Score = 49 (22.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 151 DKAVEYIVSC-KNLDGGFGCTPGGESHSGQIFCCVGALAIAGALHH--VDKDLLGW--WL 205
D+ V + + C K G T + F V L + GAL ++ G+ W+
Sbjct: 9 DRHVTFFLRCLKTFLPGL-YTSNDSNRMLLAFFIVAGLDLLGALESKTTPEERQGYIEWI 67
Query: 206 CERQVKSGGLNG 217
+ QV SGG G
Sbjct: 68 YQCQVPSGGFRG 79
>CGD|CAL0001576 [details] [associations]
symbol:CDC43 species:5476 "Candida albicans" [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 KO:K11713 EMBL:AACQ01000309
RefSeq:XP_710190.1 PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5
STRING:Q59KC5 GeneID:3648206 KEGG:cal:CaO19.1803
EvolutionaryTrace:Q59KC5 Uniprot:Q59KC5
Length = 384
Score = 152 (58.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 208 RQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR--VHWINKDKLVKFILD-CQDMENGGI 264
R + GG NGR KL D CYSWW SL ID + ++ +K ++L+ Q+ GG
Sbjct: 272 RNIDIGGFNGRENKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAEDYLLNKTQNQLFGGF 331
Query: 265 SDRPDDAVDVFHTYFGVAGLSLLEYP--GLKPIDP 297
PD D H+Y +A LSL + L+ I+P
Sbjct: 332 GRDPDSTPDPMHSYLALASLSLWNHEKFALQEINP 366
Score = 80 (33.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 89 QVLALFDKVDILDADKVSNYIVGL--QNEDGSFSGDIWGEVDTRFSYIAICCLSILQ--- 143
+++ K + D ++ L E+G + +GE D R Y+A+ +++
Sbjct: 119 KIMNFLCKCQVKDGINKGGFVPTLYYDEENGDYKQ--YGEPDLRVCYMALLIRHLMKYDA 176
Query: 144 ------RLDKINVD----KAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGAL 193
R D D ++I+ N++GGF T ESH G FC + +L +
Sbjct: 177 NNNNNNREDSNETDIDLISLQQFILDRININGGFSSTIMDESHLGFTFCAIASLKLLN-- 234
Query: 194 HHVDK-DLLGWWLCERQV 210
+ ++K WL RQV
Sbjct: 235 YPLEKLKSTKEWLIHRQV 252
Score = 47 (21.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 56 DVIS---WILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFD 95
D+IS +IL + +GGF+ I + H+ +T A+ L L +
Sbjct: 192 DLISLQQFILDRININGGFSSTIMDESHLGFTFCAIASLKLLN 234
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 79 PHVLYTLSAVQVLALFDKV--DILDADKVSNYIVGLQNEDGSFSG 121
P++ TL A+ L + I++ K+ N++ Q +DG G
Sbjct: 92 PNLSSTLFALYNLLILKSPYHTIINRKKIMNFLCKCQVKDGINKG 136
Score = 37 (18.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 52 VDEEDVISWILKCQ--D--ESGGFAGNIGHD 78
++ + +++++ KCQ D GGF + +D
Sbjct: 115 INRKKIMNFLCKCQVKDGINKGGFVPTLYYD 145
>UNIPROTKB|Q59KC5 [details] [associations]
symbol:CDC43 "Putative uncharacterized protein CDC43"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA]
InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662
GO:GO:0018344 KO:K11713 EMBL:AACQ01000309 RefSeq:XP_710190.1
PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5 STRING:Q59KC5
GeneID:3648206 KEGG:cal:CaO19.1803 EvolutionaryTrace:Q59KC5
Uniprot:Q59KC5
Length = 384
Score = 152 (58.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 208 RQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR--VHWINKDKLVKFILD-CQDMENGGI 264
R + GG NGR KL D CYSWW SL ID + ++ +K ++L+ Q+ GG
Sbjct: 272 RNIDIGGFNGRENKLSDTCYSWWCTGSLYNIDVNFIKLVDLNKAEDYLLNKTQNQLFGGF 331
Query: 265 SDRPDDAVDVFHTYFGVAGLSLLEYP--GLKPIDP 297
PD D H+Y +A LSL + L+ I+P
Sbjct: 332 GRDPDSTPDPMHSYLALASLSLWNHEKFALQEINP 366
Score = 80 (33.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 89 QVLALFDKVDILDADKVSNYIVGL--QNEDGSFSGDIWGEVDTRFSYIAICCLSILQ--- 143
+++ K + D ++ L E+G + +GE D R Y+A+ +++
Sbjct: 119 KIMNFLCKCQVKDGINKGGFVPTLYYDEENGDYKQ--YGEPDLRVCYMALLIRHLMKYDA 176
Query: 144 ------RLDKINVD----KAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAGAL 193
R D D ++I+ N++GGF T ESH G FC + +L +
Sbjct: 177 NNNNNNREDSNETDIDLISLQQFILDRININGGFSSTIMDESHLGFTFCAIASLKLLN-- 234
Query: 194 HHVDK-DLLGWWLCERQV 210
+ ++K WL RQV
Sbjct: 235 YPLEKLKSTKEWLIHRQV 252
Score = 47 (21.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 56 DVIS---WILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFD 95
D+IS +IL + +GGF+ I + H+ +T A+ L L +
Sbjct: 192 DLISLQQFILDRININGGFSSTIMDESHLGFTFCAIASLKLLN 234
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 79 PHVLYTLSAVQVLALFDKV--DILDADKVSNYIVGLQNEDGSFSG 121
P++ TL A+ L + I++ K+ N++ Q +DG G
Sbjct: 92 PNLSSTLFALYNLLILKSPYHTIINRKKIMNFLCKCQVKDGINKG 136
Score = 37 (18.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 52 VDEEDVISWILKCQ--D--ESGGFAGNIGHD 78
++ + +++++ KCQ D GGF + +D
Sbjct: 115 INRKKIMNFLCKCQVKDGINKGGFVPTLYYD 145
>UNIPROTKB|B3KSC2 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ35979 fis, clone TESTI2013545,
highly similar to Protein farnesyltransferase subunit beta (EC
2.5.1.58)" species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008144
GO:GO:0008270 GO:GO:0034097 GO:GO:0014070 GO:GO:0042277
GO:GO:0010035 GO:GO:0042060 GO:GO:0018343 GO:GO:0048146
GO:GO:0045787 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660
GO:GO:0019840 PANTHER:PTHR11774:SF6 UniGene:Hs.325531 EMBL:AL139022
EMBL:AL135745 EMBL:AK093298 IPI:IPI01011588 SMR:B3KSC2
STRING:B3KSC2 Ensembl:ENST00000448390 UCSC:uc001xid.3
HGNC:HGNC:42960 HOVERGEN:HBG102605 Uniprot:B3KSC2
Length = 193
Score = 170 (64.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 174 ESHSGQIFCCVGALAIAGALHHVDKDLLGWWLCERQVK-SGGLNGRPEKLPDVCYSWWVL 232
E+H G FC + AL I ++ L W+ RQ++ GG GR KL D CYS+W
Sbjct: 2 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 61
Query: 233 SSLIMIDRV------------HWI-NKDKLVKFILDCQDMENGGISDRPDDAVDVFHTYF 279
L ++ R HW+ ++ L ++IL C GG+ D+P + D +HT +
Sbjct: 62 GLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCY 121
Query: 280 GVAGLSLLEYPG 291
++GLS+ ++ G
Sbjct: 122 CLSGLSIAQHFG 133
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.142 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 314 0.00081 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 68
No. of states in DFA: 613 (65 KB)
Total size of DFA: 242 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.96u 0.10s 24.06t Elapsed: 00:00:01
Total cpu time: 23.98u 0.10s 24.08t Elapsed: 00:00:01
Start: Sat May 11 12:28:35 2013 End: Sat May 11 12:28:36 2013