BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021311
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 1 MIELPPVE---VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXX 57
++EL +E V+ +DV VKMLAAPINPSDIN I+G Y + P++P
Sbjct: 28 VVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVG 87
Query: 58 XXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 117
T L PGDWVIP+ GTW++ V + +V D P++ AAT+ VNP TA RML
Sbjct: 88 SNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLM 147
Query: 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 177
DF L GDS++QN + S VGQ +IQIA G+ +IN++RDR + ++LK LGA+ V
Sbjct: 148 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 207
Query: 178 FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237
TE +L +K ++P+P L NCVGG S++++L+ L++GGTMVTYGGM+K+P+ S
Sbjct: 208 ITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVAS 267
Query: 238 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA 296
S IFKDL L+GFWL +W + + +I L L R G+L VP ++Q+A
Sbjct: 268 VSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSA 327
Query: 297 LSKAL 301
L ++
Sbjct: 328 LEASM 332
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 1 MIELPPVE---VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXX 57
++EL +E V+ +DV VKMLAAPINPSDIN I+G Y + P++P
Sbjct: 41 VVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVG 100
Query: 58 XXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 117
T L PGDWVIP+ GTW++ V + +V D P++ AAT+ VNP TA RML
Sbjct: 101 SNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLM 160
Query: 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 177
DF L GDS++QN + S VGQ +IQIA G+ +IN++RDR + ++LK LGA+ V
Sbjct: 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 220
Query: 178 FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237
TE +L +K ++P+P L NCVGG S++++L+ L++GGTMVTYGGM+K+P+ S
Sbjct: 221 ITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVAS 280
Query: 238 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTA 296
S IFKDL L+GFWL +W + + +I L L R G+L VP ++Q+A
Sbjct: 281 VSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSA 340
Query: 297 LSKAL 301
L ++
Sbjct: 341 LEASM 345
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX---------XXXXXXXXTR 62
N+V VK L +PINPSDIN+I+GVYP +P +
Sbjct: 56 NEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSS 115
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----------PMEYAATIIVNPLT 111
L GDWVIPS + GTW+++ + + + K+ + + ATI VNPLT
Sbjct: 116 LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 175
Query: 112 ALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
A ML + L G D +QNG TS VG+ QI + +SI++IRDR DE LK
Sbjct: 176 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 235
Query: 171 GLGADEVFTESQLEVKNVKGLLANL-----PEPALGFNCVGGNSASKVLKFLSQGGTMVT 225
LGA +V TE Q K + E L NCVGG S++ + + L+ G M+T
Sbjct: 236 ELGATQVITEDQNNSKEFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLT 295
Query: 226 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281
YGGMS +P+T+ TS +IFK+ + GFW+ + L + K + + ++ ++ EGKL
Sbjct: 296 YGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKT-STLNQIIAWYEEGKL 350
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 27/296 (9%)
Query: 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX---------XXXXXXXXTR 62
N+V VK L +PINPSDIN+I+GVYP +P +
Sbjct: 34 NEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSS 93
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----------PMEYAATIIVNPLT 111
L GDWVIPS + GTW+++ + + + K+ + + ATI VNPLT
Sbjct: 94 LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 153
Query: 112 ALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
A ML + L G D +QNG TS VG+ QI + +SI++IRDR DE LK
Sbjct: 154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 213
Query: 171 GLGADEVFTESQLEVKNVKGLLANL-----PEPALGFNCVGGNSASKVLKFLSQGGTMVT 225
LGA +V TE Q K + E L NCVGG S++ + + L+ G M+T
Sbjct: 214 ELGATQVITEDQNNSKEFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLT 273
Query: 226 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281
YGGMS +P+T+ TS +IFK+ + GFW+ + L + K + + + ++ EGKL
Sbjct: 274 YGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTL-NQIIAWYEEGKL 328
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX---------XXXXXXXXTR 62
N+V VK L +P+NPSDIN+I+GVYP +P +
Sbjct: 56 NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSS 115
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----------PMEYAATIIVNPLT 111
L GDWVIPS + GTW+++ + + + K+ + + ATI VNPLT
Sbjct: 116 LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 175
Query: 112 ALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
A ML + L G D +QNG TS VG+ QI + +SI++IRDR DE LK
Sbjct: 176 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 235
Query: 171 GLGADEVFTESQLEVKNVKGLLANL-----PEPALGFNCVGGNSASKVLKFLSQGGTMVT 225
LGA +V TE Q + + E L NCVGG S++ + + L+ G M+T
Sbjct: 236 ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLT 295
Query: 226 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281
YGGMS +P+T+ TS +IFK+ + GFW+ + L + K + + ++ ++ EGKL
Sbjct: 296 YGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKT-STLNQIIAWYEEGKL 350
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX---------XXXXXXXXTR 62
N+V VK L +P+NPSDIN+I+GVYP +P +
Sbjct: 34 NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSS 93
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----------PMEYAATIIVNPLT 111
L GDWVIPS + GTW+++ + + + K+ + + ATI VNPLT
Sbjct: 94 LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 153
Query: 112 ALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
A ML + L G D +QNG TS VG+ QI + +SI++IRDR DE LK
Sbjct: 154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 213
Query: 171 GLGADEVFTESQLEVKNVKGLLANL-----PEPALGFNCVGGNSASKVLKFLSQGGTMVT 225
LGA +V TE Q + + E L NCVGG S++ + + L+ G M+T
Sbjct: 214 ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLT 273
Query: 226 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281
YGGMS +P+T+ TS +IFK+ + GFW+ + L + K + + ++ ++ EGKL
Sbjct: 274 YGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKT-STLNQIIAWYEEGKL 328
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 150/296 (50%), Gaps = 27/296 (9%)
Query: 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXX---------XXXXXXXXTR 62
N+V VK L +P+NPSDIN+I+GV P +P +
Sbjct: 34 NEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSS 93
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----------PMEYAATIIVNPLT 111
L GDWVIPS + GTW+++ + + + K+ + + ATI VNPLT
Sbjct: 94 LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 153
Query: 112 ALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
A ML + L G D +QNG TS VG+ QI + +SI++IRDR DE LK
Sbjct: 154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 213
Query: 171 GLGADEVFTESQLEVKNVKGLLANL-----PEPALGFNCVGGNSASKVLKFLSQGGTMVT 225
LGA +V TE Q + + E L NCVGG S++ + + L+ G M+T
Sbjct: 214 ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLT 273
Query: 226 YGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281
YGGMS +P+T+ TS +IFK+ + GFW+ + L + K + + ++ ++ EGKL
Sbjct: 274 YGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKT-STLNQIIAWYEEGKL 328
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 14/279 (5%)
Query: 9 VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDW 68
+K+N+V V+ML PINPSD+ I G Y R +P +R G
Sbjct: 30 LKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKR 89
Query: 69 VIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY-AATIIVNPLTALRMLEDFTTLNSGDS 127
V+P GTWQ Y VK + + DS ++ AA + +NPLTA + L D
Sbjct: 90 VLPL-RGEGTWQEY-VKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDV 147
Query: 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN 187
++ N S +G Q+++ I + R+ ++ E+L LGA V S +
Sbjct: 148 LLVNACGSAIGHLFAQLSQILNFRLIAVTRN----NKHTEELLRLGAAYVIDTSTAPLYE 203
Query: 188 VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT---VSTSAFIFK 244
L N + +GG +++ L G +T G +S + + T A +
Sbjct: 204 TVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHA 263
Query: 245 DLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY 283
++ F L+ W + + +L+ L +L++
Sbjct: 264 NI----FHLRHWNDEVSPYKWQETFRHLIRLVENEQLRF 298
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Query: 10 KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWV 69
K++ V +K+ A +NP + G Y +P +P + GD V
Sbjct: 56 KDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV 115
Query: 70 IPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIV 129
S SG + Y + +K+ + + A I + TA R L + +G+S++
Sbjct: 116 FTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVL 175
Query: 130 QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 189
+GA+ VG QIAR G+ I AG++E ++ + GA EVF EV +
Sbjct: 176 VHGASGGVGLAACQIARAYGLK----ILGTAGTEEGQKIVLQNGAHEVFNHR--EVNYID 229
Query: 190 GLLANLPEPALG--FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLS 247
+ + E + + + SK L LS GG ++ G S+ I ++ + K+ S
Sbjct: 230 KIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG--SRGTIEINPRDTMAKESS 287
Query: 248 LKGFWL 253
+ G L
Sbjct: 288 IIGVTL 293
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 30/240 (12%)
Query: 79 WQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGA 133
W ++ + D K+ + P+ A I P LTA L + + G++++ + A
Sbjct: 95 WTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAA 154
Query: 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 193
VG + QIA+ +G + AGSDE LK +G D F K V L
Sbjct: 155 AGAVGSVVGQIAKLKGCKVVG----AAGSDEKIAYLKQIGFDAAFN-----YKTVNSLEE 205
Query: 194 NLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMV------TYGGMSKKPITVSTSAFI 242
L + + G++C VGG + VL + G + Y M + P S + I
Sbjct: 206 ALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESII 265
Query: 243 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVP-FNNFQTALSKAL 301
+K L ++GF + +W + R+++ ++L EGK++Y + F N A + L
Sbjct: 266 YKQLRIEGFIVYRWQGDVREKALRDLMKWVL----EGKIQYHEHVTKGFENMPAAFIEML 321
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 117
L G V+ SP W ++ + D K+ + P+ A + P LTA L
Sbjct: 78 LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 133
Query: 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 177
+ + G++++ N A VG + QIA+ +G + + GSDE L+ LG D V
Sbjct: 134 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 189
Query: 178 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMVTYGGMSKK 232
F K V+ L L + + G++C VGG ++ V+ + + G + G +S
Sbjct: 190 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 244
Query: 233 PITVSTSA------FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 286
T I+++L ++ F + +W + ++++ ++L EGK++Y
Sbjct: 245 NRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVL----EGKIQYKEY 300
Query: 287 LVP-FNNFQTALSKAL 301
++ F N A L
Sbjct: 301 IIEGFENMPAAFMGML 316
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 117
L G V+ SP W ++ + D K+ + P+ A + P LTA L
Sbjct: 99 LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 154
Query: 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 177
+ + G++++ N A VG + QIA+ +G + + GSDE L+ LG D V
Sbjct: 155 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 210
Query: 178 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVLKFLSQGGTMVTYGGMSKK 232
F K V+ L L + + G++C VGG ++ V+ + + G + G +S
Sbjct: 211 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 265
Query: 233 PITVSTSA------FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 286
T I+++L ++ F + +W + ++++ ++L EGK++Y
Sbjct: 266 NRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVL----EGKIQYKEY 321
Query: 287 LVP-FNNFQTALSKAL 301
++ F N A L
Sbjct: 322 IIEGFENMPAAFMGML 337
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
Query: 100 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159
E A IVNPLTA+ D + V S + + II +A+ G I +R
Sbjct: 141 EDGAAXIVNPLTAIAXF-DIVKQEGEKAFVXTAGASQLCKLIIGLAKEEGFRPIVTVR-- 197
Query: 160 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQ 219
DE LK +GA V E + + + +P + + V G AS + +
Sbjct: 198 --RDEQIALLKDIGAAHVLNEKAPDFEATLREVXKAEQPRIFLDAVTGPLASAIFNAXPK 255
Query: 220 GGTMVTYGGMSKKPITVSTSA-FIFKDLSLKGFWLQKW 256
+ YG + + IF+ ++GFWL +W
Sbjct: 256 RARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEW 293
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 119/307 (38%), Gaps = 42/307 (13%)
Query: 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTR 62
+LP E +V V++ AA +N D+ +GV + +P
Sbjct: 19 DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEG 78
Query: 63 LAPGDWVIPSPPSS--------------------------GTWQSYVVKDQSVWHKVSKD 96
APGD V+ +P S GT+ YVV ++ K+
Sbjct: 79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKN 138
Query: 97 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156
E AA I + LTA +M+ D + GD ++ A S V IQIA+ G I
Sbjct: 139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT- 197
Query: 157 RDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLK 215
AGS++ + K LGADE + + K V+ L + + G V+K
Sbjct: 198 ---AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKV-VDHTGALYFEGVIK 253
Query: 216 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCL 275
+ GG + G S T+ + ++ LS+ L S A++ R + +L
Sbjct: 254 ATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI--------LGSTMASKSR--LFPILRF 303
Query: 276 AREGKLK 282
EGKLK
Sbjct: 304 VEEGKLK 310
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 31/252 (12%)
Query: 11 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG---- 66
E +V +K+ A+ +N +D+ + +G Y P L PG
Sbjct: 33 EGEVLLKVAASALNRADLMQRQGQYDPPPGA-------SNILGLEASGHVAELGPGCQGH 85
Query: 67 ----DWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 122
D + P G Q YV + + + + + AA I LTA ++L +
Sbjct: 86 WKIGDTAMALLPGGGQAQ-YVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNV 144
Query: 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-- 180
+GD ++ + S VG IQ+ R G +I ++ AGS + + + LGA F
Sbjct: 145 QAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLV--TAGSQKKLQMAEKLGAAAGFNYKK 200
Query: 181 ---SQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237
S+ +K KG NL +C+GG+ K + L+ G V YG M I
Sbjct: 201 EDFSEATLKFTKGAGVNLI-----LDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255
Query: 238 T-SAFIFKDLSL 248
S +FK SL
Sbjct: 256 LFSKLLFKRGSL 267
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 31/252 (12%)
Query: 11 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG---- 66
E +V +K+ A+ +N +D+ + +G Y P L PG
Sbjct: 49 EGEVLLKVAASALNRADLMQRQGQYDPPPGA-------SNILGLEASGHVAELGPGCQGH 101
Query: 67 ----DWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 122
D + P G Q YV + + + + + AA I LTA ++L +
Sbjct: 102 WKIGDTAMALLPGGGQAQ-YVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNV 160
Query: 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-- 180
+GD ++ + S VG IQ+ R G +I ++ AGS + + + LGA F
Sbjct: 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLV--TAGSQKKLQMAEKLGAAAGFNYKK 216
Query: 181 ---SQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237
S+ +K KG NL +C+GG+ K + L+ G V YG M I
Sbjct: 217 EDFSEATLKFTKGAGVNLI-----LDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271
Query: 238 T-SAFIFKDLSL 248
S +FK SL
Sbjct: 272 LFSKLLFKRGSL 283
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 12/222 (5%)
Query: 96 DSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 154
D P+ Y ++ P +TA + + G+++ + A+ VGQ + Q+A+ G + +
Sbjct: 126 DVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185
Query: 155 IIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASK 212
AGS E + LK G D+ F + E L P + F VGG
Sbjct: 186 ----SAGSKEKVDLLKTKFGFDDAFNYKE-ESDLTAALKRCFPNGIDIYFENVGGKMLDA 240
Query: 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYL 272
VL ++ G + G +S+ + ++ K +Q ++ S+ + ++++
Sbjct: 241 VLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFV 300
Query: 273 LCLAREGKLKYDMELVPFNNFQTALSKALGL-HGSQ-PKQVI 312
L REGK+ Y ++ + + A +GL HG KQV+
Sbjct: 301 LPHIREGKITYVEDVA--DGLEKAPEALVGLFHGKNVGKQVV 340
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 61 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT 120
T LAPGD V+ P + + V D + ++ AA++ + LTA L D
Sbjct: 284 TGLAPGDRVMGMIPKA--FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLA 341
Query: 121 TLNSGDSIVQNGATSIVGQCIIQIARHRG 149
L G+S++ + A VG IQ+ARH G
Sbjct: 342 GLRPGESLLVHSAAGGVGMAAIQLARHLG 370
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 102 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161
AAT V LTA L + L+ G+ ++ + AT VG + IA+ G I AG
Sbjct: 16 AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGAR----IYTTAG 71
Query: 162 SDEAKEKLKGLGADEV-------FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 214
SD +E L LG + V F + LE+ + G+ L N + G + + +
Sbjct: 72 SDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVL-------NSLAGEAIQRGV 124
Query: 215 KFLSQGGTMVTYGGMSKKPITVSTS---AFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 271
+ L+ GG + G KK + S A + K S L L + A R ++ +
Sbjct: 125 QILAPGGRFIELG---KKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA-RYRQLLQH 180
Query: 272 LLCLAREGKLKYDMELVPFNNF 293
+L +GKL E++P F
Sbjct: 181 ILQHVADGKL----EVLPVTAF 198
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 100/260 (38%), Gaps = 28/260 (10%)
Query: 12 NDVCVKMLAAPINP---SDINRIEGVY--PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG 66
NDV VK L +P S + +IEG Y P P + G
Sbjct: 41 NDVVVKNLYLSCDPYMRSRMRKIEGSYVESFAPGSPITGYGVAKVLESGD----PKFQKG 96
Query: 67 DWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLN 123
D V W+ Y + Q+++ KD P+ Y I+ P +TA + +
Sbjct: 97 DLVW----GMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPK 152
Query: 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ 182
G+++ + A+ VGQ + Q A+ G + + AGS E + LK G DE F +
Sbjct: 153 KGETVFVSAASGAVGQLVGQFAKMLGCYVVG----SAGSKEKVDLLKSKFGFDEAFNYKE 208
Query: 183 LEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTS-- 239
E L P+ + F VGG VL + G + G +S+ + +
Sbjct: 209 -EQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVH 267
Query: 240 ---AFIFKDLSLKGFWLQKW 256
I K + ++GF + +
Sbjct: 268 NLFCLITKRIRMEGFLVFDY 287
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 26/239 (10%)
Query: 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTR 62
+ P + E ++ +K +N + +G+YP P T
Sbjct: 27 DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK--PYVLGREASGTVVAKGKGVTN 84
Query: 63 LAPGDWVIPSPPSSGTWQSYV-VKDQSVWHKVSK---DSPMEYAATIIVNPLTALRMLED 118
GD V + S+ T+ Y + Q K+ K D ++ A ++ LTAL +
Sbjct: 85 FEVGDQV--AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNE 142
Query: 119 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 178
+ GD ++ A VG + Q+ + +G H+I + A +DE + K GA+ +
Sbjct: 143 AYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAV----ASTDEKLKIAKEYGAEYLI 198
Query: 179 TESQ-------LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230
S+ L+ N KG+ A+ F+ VG ++ L L + G V++G S
Sbjct: 199 NASKEDILRQVLKFTNGKGVDAS-------FDSVGKDTFEISLAALKRKGVFVSFGNAS 250
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV----PXXXXXXXXXXXXXX 56
+++ P E ++N +K+ AA +NP D G V K+ P
Sbjct: 23 LVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL 82
Query: 57 XXXXTRLAPGDWV-----IPSPPSSGTWQSYVVKD-QSVWHKVSKDSPMEYAATIIVNPL 110
+ GD V P P + YV ++ K+ K S ++ AA++ L
Sbjct: 83 GSDVNNVNIGDKVXGIAGFPDHPCC--YAEYVCASPDTIIQKLEKLSFLQ-AASLPTAGL 139
Query: 111 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 170
TAL+ L + GD ++ + VG IQ+A+ +G I R + LK
Sbjct: 140 TALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHA-----FLK 193
Query: 171 GLGADEVFTESQLEVKNVKGLLA-NLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229
LGA++ + + LLA + P A+ + VGG+ + + L + G +V
Sbjct: 194 ALGAEQCINYHEEDF-----LLAISTPVDAV-IDLVGGDVGIQSIDCLKETGCIV----- 242
Query: 230 SKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVP 289
S IT + K + F L K + E+ + YL L E KL+ ++ +
Sbjct: 243 SVPTITAGRVIEVAKQKHRRAFGLLKQFNIEE-------LHYLGKLVSEDKLRIEISRI- 294
Query: 290 FNNFQTALSKALGLH 304
FQ LS+A+ H
Sbjct: 295 ---FQ--LSEAVTAH 304
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 78 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV 137
W V +K+ D AA +N +TA ML + L G S++ + A V
Sbjct: 96 AWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGV 155
Query: 138 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 197
GQ + Q+ N+ S E +K +F + V+ VK + A +
Sbjct: 156 GQAVAQLCST----VPNVTVFGTASTFKHEAIKD-SVTHLFDRNADYVQEVKRISAEGVD 210
Query: 198 PALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFI 242
L +C+ G++ K L L GT + YG S +T T +F
Sbjct: 211 IVL--DCLCGDNTGKGLSLLKPLGTYILYG--SSNMVTGETKSFF 251
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162
A+ VNPLTAL +E L ++V A S +GQ + QI GI +NI+R +
Sbjct: 151 ASSFVNPLTALGXVET-XRLEGHSALVHTAAASNLGQXLNQICLKDGIKLVNIVRKQ--- 206
Query: 163 DEAKEKLKGLGADEV 177
E + LK GA V
Sbjct: 207 -EQADLLKAQGAVHV 220
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 80 QSYVVKDQSVWHKVS-KDSPM-EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV 137
Q Y + + ++KV +P+ Y + + + +TA L D +G+++V +GA V
Sbjct: 103 QDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAV 162
Query: 138 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN---VKGLLAN 194
G QIAR +G + I G+++ + ++ LG D ++ KN GL
Sbjct: 163 GSVAGQIARLKGCRVVGIA---GGAEKCRFLVEELGFD-----GAIDYKNEDLAAGLKRE 214
Query: 195 LPEPA-LGFNCVGGNSASKVLKFLSQGGTMVTYGGMSK 231
P+ + F+ VGG VL ++ +V G +S+
Sbjct: 215 CPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQ 252
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 92 KVSKDSPME--YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 149
KV KD ++ + A +++ +TA +L + GD ++ + A +G ++ ARH G
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG 170
Query: 150 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS 209
I + ++E E + LG S + V + + ++ +G ++
Sbjct: 171 ATVIGTVS----TEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT 226
Query: 210 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 250
K L L G YG S V+ + +DL ++G
Sbjct: 227 LQKSLDCLRPRGMCAAYGHASG----VADPIRVVEDLGVRG 263
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 120/308 (38%), Gaps = 29/308 (9%)
Query: 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXT 61
+E P + EN++ V+ A IN D G+YP P +P
Sbjct: 19 VEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVSKVGSGVK 77
Query: 62 RLAPGDWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF 119
+ GD V+ + + G + S ++ D++ + E AA + LT +L
Sbjct: 78 HIKAGDRVVYAQSALGAYSSVHNIIADKAAI--LPAAISFEQAAASFLKGLTVYYLLRKT 135
Query: 120 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT 179
+ + + + A VG Q A+ G I + + +A+ LK GA +V
Sbjct: 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV---GTAQKAQSALKA-GAWQVIN 191
Query: 180 ESQLEVKNVKGLLANLPEPALG------FNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP 233
+ + L+ L E G ++ VG ++ + L L + G MV++G S
Sbjct: 192 YRE------EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAV 245
Query: 234 ITVSTSAFIFK-DLSLKGFWLQKWLSS-EKATECRNMIDYLLCLAREGKLKYDM---ELV 288
V+ K L + LQ ++++ E+ TE N L L G +K D+ +
Sbjct: 246 TGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE---LFSLIASGVIKVDVAEQQKY 302
Query: 289 PFNNFQTA 296
P + Q A
Sbjct: 303 PLKDAQRA 310
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 121/329 (36%), Gaps = 34/329 (10%)
Query: 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP------XXXXXXXXXXXXX 55
IELP +D+ V++ A +NP D Y VR P
Sbjct: 43 IELPKPAPAGHDILVEVKAVSVNPVD-------YKVRRSTPPDGTDWKVIGYDAAGIVSA 95
Query: 56 XXXXXTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113
T PGD V S GT + + D+ + + K AA + + +TA
Sbjct: 96 VGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAW 155
Query: 114 RMLEDFTTLN-----SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK 168
D +N + +I+ G VG +QIAR R + +I A E +E
Sbjct: 156 EAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQR--TDLTVIA-TASRPETQEW 212
Query: 169 LKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYG 227
+K LGA V S+ V L L PA F+ + A+++ ++ G
Sbjct: 213 VKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFC--- 267
Query: 228 GMSKKPITVSTSAFIFKDLSLKG--FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM 285
+ P F K +S+ + + + +E +++ + L EG+L+ +
Sbjct: 268 -LIDDPSAFDIXLFKRKAVSIHHELXFTRPXFGTPDXSEQGRLLNDVSRLVDEGRLRTTL 326
Query: 286 --ELVPFNNFQTALSKALGLHGSQPKQVI 312
L P N + AL G+ +V+
Sbjct: 327 TNRLSPINAANLKQAHALVESGTARGKVV 355
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 65 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS 124
PGDW++P P Q+ +K+ V Y L+ R+ ++ +
Sbjct: 109 PGDWLVPLP------QNLSLKEAXV-----------YGTAGFTAALSVHRLEQNGLSPEK 151
Query: 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 184
G S++ GAT VG + RG + G+ EA + LK LGA EV + +
Sbjct: 152 G-SVLVTGATGGVGGIAVSXLNKRGYDVVA----STGNREAADYLKQLGASEVISREDVY 206
Query: 185 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK 244
+K L + A+ + VGG + +L + GG++ G + + FI +
Sbjct: 207 DGTLKALSKQQWQGAV--DPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILR 264
Query: 245 DLSLKGF 251
+SL G
Sbjct: 265 GVSLLGI 271
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 7/142 (4%)
Query: 110 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL 169
L+ R+ E T G +V GAT VG + RG + G + L
Sbjct: 136 LSIHRLEEHGLTPERGPVLV-TGATGGVGSLAVSXLAKRGY----TVEASTGKAAEHDYL 190
Query: 170 KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229
+ LGA EV + + ++ L + A + VGG + + VL GG + G
Sbjct: 191 RVLGAKEVLAREDVXAERIRPL--DKQRWAAAVDPVGGRTLATVLSRXRYGGAVAVSGLT 248
Query: 230 SKKPITVSTSAFIFKDLSLKGF 251
+ + FI + +SL G
Sbjct: 249 GGAEVPTTVHPFILRGVSLLGI 270
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 18/140 (12%)
Query: 116 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 175
LED IV GA+ VG + + G + + +G + E LK LGA
Sbjct: 159 LEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAV----SGRESTHEYLKSLGAS 214
Query: 176 EV-----FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230
V F ES+ K V A + VG +KVL ++ GG + G
Sbjct: 215 RVLPRDEFAESRPLEKQVW---------AGAIDTVGDKVLAKVLAQMNYGGCVAACGLAG 265
Query: 231 KKPITVSTSAFIFKDLSLKG 250
+ + FI +++ L+G
Sbjct: 266 GFTLPTTVMPFILRNVRLQG 285
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 81/213 (38%), Gaps = 29/213 (13%)
Query: 74 PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133
P G + V ++ SP E AA V+ LTA L+ G+ ++ A
Sbjct: 77 PQGGLAERVAVPKGALLPLPEGLSP-EEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAA 134
Query: 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLL 192
+G +Q+AR G+ + A S K L LGA+E T
Sbjct: 135 AGALGTAAVQVARAMGLRVLA-----AASRPEKLALPLALGAEEAAT------------Y 177
Query: 193 ANLPEPALGFNC------VGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 246
A +PE A + V G + L L+ GG +V G + + + ++L
Sbjct: 178 AEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNL 237
Query: 247 SLKGFWLQKWLSSEKATECRNMIDYLLC-LARE 278
++ GFWL L E + +LL L RE
Sbjct: 238 AVLGFWLTPLLREGALVE--EALGFLLPRLGRE 268
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 29/213 (13%)
Query: 74 PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133
P G + V ++ SP E AA V+ LTA L+ G+ ++ A
Sbjct: 77 PQGGLAERVAVPKGALLPLPEGLSP-EEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAA 134
Query: 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLL 192
+G +Q+AR G+ + A S K L LGA+E T
Sbjct: 135 AGALGTAAVQVARAXGLRVLA-----AASRPEKLALPLALGAEEAAT------------Y 177
Query: 193 ANLPEPALGFNC------VGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 246
A +PE A + V G + L L+ GG +V G + + ++L
Sbjct: 178 AEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLXRRNL 237
Query: 247 SLKGFWLQKWLSSEKATECRNMIDYLLC-LARE 278
++ GFWL L E + +LL L RE
Sbjct: 238 AVLGFWLTPLLREGALVE--EALGFLLPRLGRE 268
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 62 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 121
R A G V+ P+ G S ++ + W +V +E AA++ + TA L
Sbjct: 1606 RDASGRRVMGMVPAEGLATSVLLLQHATW-EVPSTWTLEEAASVPIVYTTAYYSLVVRGR 1664
Query: 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG 171
+ G+S++ + + VGQ I IA RG + GS E + L+
Sbjct: 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTV----GSAEKRAYLQA 1710
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 70/199 (35%), Gaps = 28/199 (14%)
Query: 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXX 60
+ E P E E+D+ V+ LA +N D +E + P
Sbjct: 43 LAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSV 102
Query: 61 TRLAPGDWVIPS----------PPSS-------------GTWQSYVVKDQSVWHKVSKDS 97
TR PGD VI + P + G YVV + + K
Sbjct: 103 TRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSL 162
Query: 98 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157
A+T+ LTA L + L +GD +V G T V +QIA+ G I
Sbjct: 163 DAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS 221
Query: 158 DRAGSDEAKEKLKGLGADE 176
R E ++ LGAD
Sbjct: 222 SR----EKLDRAFALGADH 236
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 64 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA-ATIIVNPLTALR-------- 114
PGD+V P SG + ++++ + V+ D+P ++A AT +V A+
Sbjct: 336 GPGDFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEPARLADLS 395
Query: 115 -MLEDFTTLNSGD 126
+ DF N GD
Sbjct: 396 NSMRDFVRANEGD 408
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 75 SSGTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133
+ G + Y VV ++ W K+ + +YA +++ P T + D+++ GA
Sbjct: 133 ADGGFSEYAVVPAKNAW-KIPEAVADQYA--VMIEPFTIAANVTGHGQPTENDTVLVYGA 189
Query: 134 TSIVGQCIIQIARHRGIHSIN--IIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNV 188
I G I+Q+ + G++++ I+ DR DE EK K GAD SQ E
Sbjct: 190 GPI-GLTIVQVLK--GVYNVKNVIVADRI--DERLEKAKESGADWAINNSQTPLGESFAE 244
Query: 189 KGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL 248
KG+ +P L + S K L+ + G S +P V K+LS+
Sbjct: 245 KGI-----KPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSI 299
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 58/164 (35%), Gaps = 5/164 (3%)
Query: 11 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVI 70
E +V V+ A +N DI + +G YP + A GD V
Sbjct: 55 EGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVC 114
Query: 71 PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 130
+ G + Y + K AA + T L L G+S++
Sbjct: 115 -GLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLI 173
Query: 131 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA 174
+G TS +G IQ+AR G + AGS E + LGA
Sbjct: 174 HGGTSGIGTTAIQLARAFGAE----VYATAGSTGKCEACERLGA 213
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase
Length = 488
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 212 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFW-----LQKWLSSEKATECR 266
K L FL+QGGT V G +K V + I K+ LK F + + + EC
Sbjct: 245 KTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLK-FQTAPNRFEALAAHDAIVECS 303
Query: 267 NMIDYLLC 274
++ L C
Sbjct: 304 GALNTLAC 311
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 17/197 (8%)
Query: 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 122
L P +PP G Y V HK+ + +E A ++ PL+ +
Sbjct: 109 LCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGA--LLEPLSVGVHACRRAGV 166
Query: 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT--- 179
G +++ GA I G + A+ G + R S E K GAD
Sbjct: 167 QLGTTVLVIGAGPI-GLVSVLAAKAYGAFVVCTAR----SPRRLEVAKNCGADVTLVVDP 221
Query: 180 ---ESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV-LKFLSQGGTMVTYGGMSKKPIT 235
E ++ ++ + +LP + +C G + + GGT++ GM + +T
Sbjct: 222 AKEEESSIIERIRSAIGDLPN--VTIDCSGNEKCITIGINITRTGGTLMLV-GMGSQMVT 278
Query: 236 VSTSAFIFKDLSLKGFW 252
V +++ +K +
Sbjct: 279 VPLVNACAREIDIKSVF 295
>pdb|3V7A|F Chain F, Structural Basis For Broad Detection Of Genogroup Ii
Noroviruses By A Monoclonal Antibody That Binds To A
Site Occluded In The Viral Particle
pdb|3V7A|E Chain E, Structural Basis For Broad Detection Of Genogroup Ii
Noroviruses By A Monoclonal Antibody That Binds To A
Site Occluded In The Viral Particle
Length = 223
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 141 IIQIARHR---GIHSINIIRDRAGSDEAKEKLKG---LGADEVFTESQLEVKNVKGLLAN 194
+I+ + R G+ I +I R+G + EK KG L AD+ + + +++ ++
Sbjct: 33 LIEWVKQRPGQGLEWIGVINPRSGDTNSNEKFKGKAILTADKSSSTAYMQLSSLTS---- 88
Query: 195 LPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV 236
+ A+ F G +A + + Q GT VT P +V
Sbjct: 89 -DDSAVYFCARSGTTAYFAMDYWGQ-GTSVTVSSAKTTPPSV 128
>pdb|1A76|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
pdb|1A77|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
Length = 326
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 74 PSSGTWQ-SYVVKDQSVWHKVSKD-SPMEYAATIIVNPLTALRMLEDFTTLNS 124
PS G Q SY+ K VW VS+D + Y A +V LT + + + LN
Sbjct: 150 PSEGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRNLTTTKEMPELIELNE 202
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
Query: 116 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 175
LED +V GA+ VG + + G + +G + LK LGA+
Sbjct: 138 LEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAV----SGRESTHGYLKSLGAN 193
Query: 176 EVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT 235
+ S+ E + L L A+ + VG +KVL + GG + G +
Sbjct: 194 RIL--SRDEFAESRPLEKQLWAGAI--DTVGDKVLAKVLAQXNYGGCVAACGLAGGFALP 249
Query: 236 VSTSAFIFKDLSLKG 250
+ FI +++ L+G
Sbjct: 250 TTVXPFILRNVRLQG 264
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 76/207 (36%), Gaps = 41/207 (19%)
Query: 6 PVEVKE--------NDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXX 57
P+++KE +V V++ A + +D++ G +PV+PK+P
Sbjct: 12 PLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVG 71
Query: 58 XXXTRLAPGDWV-IPSPPSS--------------------------GTWQSYVVKDQSVW 90
T L GD V IP S+ G + Y
Sbjct: 72 PGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYV 131
Query: 91 HKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 150
K+ + E AA I +T + L+ T G+ + G + G +Q A+ G
Sbjct: 132 VKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGL-GHVAVQYAKAMG- 188
Query: 151 HSINIIRDRAGSDEAKEKLKGLGADEV 177
+N++ G DE E K LGAD V
Sbjct: 189 --LNVVAVDIG-DEKLELAKELGADLV 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,792,341
Number of Sequences: 62578
Number of extensions: 334285
Number of successful extensions: 1033
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 976
Number of HSP's gapped (non-prelim): 52
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)