Query 021311
Match_columns 314
No_of_seqs 134 out of 1581
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 09:14:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021311hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.3E-56 2.8E-61 375.7 27.2 290 1-314 18-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 1.7E-53 3.6E-58 365.9 31.4 303 1-314 17-326 (326)
3 KOG0024 Sorbitol dehydrogenase 100.0 1.6E-51 3.5E-56 334.6 25.0 295 1-313 18-351 (354)
4 KOG1197 Predicted quinone oxid 100.0 2E-50 4.3E-55 316.3 24.9 303 1-313 25-329 (336)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.4E-49 3.1E-54 322.4 26.0 292 2-314 27-354 (360)
6 KOG0025 Zn2+-binding dehydroge 100.0 3.9E-48 8.4E-53 308.8 30.2 313 1-313 37-351 (354)
7 COG1062 AdhC Zn-dependent alco 100.0 1E-48 2.2E-53 321.1 24.1 296 1-314 17-366 (366)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 2.3E-46 5E-51 331.0 30.2 294 2-312 24-371 (371)
9 cd08239 THR_DH_like L-threonin 100.0 4.3E-46 9.3E-51 326.0 31.1 294 1-314 14-339 (339)
10 PLN02586 probable cinnamyl alc 100.0 5.4E-46 1.2E-50 326.7 30.3 291 2-314 28-353 (360)
11 PLN02178 cinnamyl-alcohol dehy 100.0 8.6E-46 1.9E-50 326.3 31.0 291 2-314 22-348 (375)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.9E-45 6.3E-50 322.6 29.8 296 1-313 16-357 (358)
13 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-44 2.3E-49 315.2 31.9 299 2-313 21-324 (324)
14 PLN02740 Alcohol dehydrogenase 100.0 6.8E-45 1.5E-49 322.4 30.5 296 2-314 26-381 (381)
15 TIGR02818 adh_III_F_hyde S-(hy 100.0 1E-44 2.2E-49 319.9 31.2 295 2-314 17-368 (368)
16 PRK09880 L-idonate 5-dehydroge 100.0 6.4E-45 1.4E-49 318.6 29.4 288 1-314 18-343 (343)
17 PLN02827 Alcohol dehydrogenase 100.0 1.2E-44 2.6E-49 320.0 30.7 294 1-314 27-376 (378)
18 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.2E-44 2.7E-49 314.4 29.9 284 1-312 17-328 (329)
19 KOG0022 Alcohol dehydrogenase, 100.0 2.8E-45 6.1E-50 296.1 23.7 297 1-314 22-375 (375)
20 cd08292 ETR_like_2 2-enoyl thi 100.0 2.5E-43 5.4E-48 306.8 33.8 304 2-313 19-324 (324)
21 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-43 2.3E-48 312.1 31.4 291 1-314 24-350 (357)
22 PLN03154 putative allyl alcoho 100.0 2E-43 4.4E-48 309.0 32.6 294 4-314 35-345 (348)
23 cd08301 alcohol_DH_plants Plan 100.0 1.2E-43 2.7E-48 313.6 30.7 294 1-312 17-368 (369)
24 cd08300 alcohol_DH_class_III c 100.0 1E-43 2.3E-48 313.7 30.2 295 1-313 17-368 (368)
25 TIGR03201 dearomat_had 6-hydro 100.0 2.2E-43 4.7E-48 309.6 30.8 294 1-314 13-349 (349)
26 cd08277 liver_alcohol_DH_like 100.0 3.1E-43 6.7E-48 310.4 30.6 294 1-313 17-365 (365)
27 TIGR02819 fdhA_non_GSH formald 100.0 5.5E-43 1.2E-47 309.9 29.5 293 1-314 16-390 (393)
28 PRK10309 galactitol-1-phosphat 100.0 1.2E-42 2.6E-47 305.0 30.4 297 2-314 15-346 (347)
29 cd08293 PTGR2 Prostaglandin re 100.0 1.8E-42 3.8E-47 304.0 31.4 298 2-314 26-345 (345)
30 COG1063 Tdh Threonine dehydrog 100.0 1.1E-42 2.4E-47 302.9 28.9 296 2-314 16-350 (350)
31 cd08295 double_bond_reductase_ 100.0 3.9E-42 8.5E-47 300.7 31.4 294 5-314 31-338 (338)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.2E-42 2.6E-47 299.5 27.1 279 1-313 15-308 (308)
33 cd08290 ETR 2-enoyl thioester 100.0 1.5E-41 3.3E-46 297.6 33.1 310 2-314 19-341 (341)
34 TIGR02825 B4_12hDH leukotriene 100.0 6E-42 1.3E-46 298.0 30.3 290 2-313 22-325 (325)
35 cd08230 glucose_DH Glucose deh 100.0 6.3E-42 1.4E-46 301.2 28.0 291 1-314 15-355 (355)
36 cd08233 butanediol_DH_like (2R 100.0 2.3E-41 5.1E-46 297.4 29.5 293 2-313 15-351 (351)
37 cd08231 MDR_TM0436_like Hypoth 100.0 5.2E-41 1.1E-45 296.3 30.1 295 1-314 15-361 (361)
38 cd08237 ribitol-5-phosphate_DH 100.0 2.2E-41 4.8E-46 295.6 27.4 281 1-314 16-339 (341)
39 cd08238 sorbose_phosphate_red 100.0 5.7E-41 1.2E-45 299.9 30.3 296 1-314 16-368 (410)
40 cd08294 leukotriene_B4_DH_like 100.0 9.6E-41 2.1E-45 291.1 30.7 290 2-314 24-329 (329)
41 cd05282 ETR_like 2-enoyl thioe 100.0 3.5E-40 7.6E-45 286.9 32.9 305 2-313 17-323 (323)
42 cd05284 arabinose_DH_like D-ar 100.0 2E-40 4.4E-45 290.4 31.4 294 2-314 16-340 (340)
43 cd08296 CAD_like Cinnamyl alco 100.0 5.2E-40 1.1E-44 286.7 30.4 290 1-313 15-333 (333)
44 cd08274 MDR9 Medium chain dehy 100.0 6.8E-40 1.5E-44 288.2 31.0 292 4-314 21-350 (350)
45 cd08246 crotonyl_coA_red croto 100.0 7E-40 1.5E-44 292.1 31.1 295 2-312 33-391 (393)
46 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.4E-39 3E-44 284.7 31.6 300 2-313 20-334 (336)
47 cd08244 MDR_enoyl_red Possible 100.0 7.6E-39 1.6E-43 278.6 33.3 301 3-314 19-324 (324)
48 KOG1198 Zinc-binding oxidoredu 100.0 3.6E-40 7.9E-45 283.3 24.5 304 2-314 23-345 (347)
49 PTZ00354 alcohol dehydrogenase 100.0 5.2E-39 1.1E-43 280.7 31.7 305 3-314 20-328 (334)
50 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 8.5E-39 1.8E-43 278.4 32.8 300 2-314 18-325 (325)
51 PRK10754 quinone oxidoreductas 100.0 4.7E-39 1E-43 280.3 31.2 304 2-314 19-327 (327)
52 cd08297 CAD3 Cinnamyl alcohol 100.0 7.4E-39 1.6E-43 280.6 31.6 296 2-314 17-341 (341)
53 cd08285 NADP_ADH NADP(H)-depen 100.0 4.6E-39 9.9E-44 282.9 30.3 297 2-314 15-351 (351)
54 TIGR02823 oxido_YhdH putative 100.0 1.2E-38 2.5E-43 277.3 31.9 300 1-314 16-323 (323)
55 cd08278 benzyl_alcohol_DH Benz 100.0 6.2E-39 1.3E-43 283.0 30.5 295 2-313 18-365 (365)
56 cd08283 FDH_like_1 Glutathione 100.0 9.8E-39 2.1E-43 283.6 31.1 296 1-314 14-386 (386)
57 cd05283 CAD1 Cinnamyl alcohol 100.0 2.5E-38 5.4E-43 276.6 30.6 288 2-313 15-337 (337)
58 cd08250 Mgc45594_like Mgc45594 100.0 4.4E-38 9.6E-43 274.4 31.4 296 1-313 20-329 (329)
59 cd08299 alcohol_DH_class_I_II_ 100.0 3.6E-38 7.7E-43 278.6 30.4 294 2-314 23-373 (373)
60 cd05279 Zn_ADH1 Liver alcohol 100.0 3.4E-38 7.4E-43 278.3 30.1 294 2-313 16-365 (365)
61 cd08240 6_hydroxyhexanoate_dh_ 100.0 3.6E-38 7.7E-43 277.1 30.0 295 1-314 15-350 (350)
62 cd05278 FDH_like Formaldehyde 100.0 3.4E-38 7.4E-43 277.1 29.8 294 2-314 15-347 (347)
63 PRK10083 putative oxidoreducta 100.0 3.8E-38 8.2E-43 275.9 29.7 291 2-314 15-337 (339)
64 TIGR01751 crot-CoA-red crotony 100.0 5.2E-38 1.1E-42 280.1 30.7 297 2-314 28-387 (398)
65 cd08263 Zn_ADH10 Alcohol dehyd 100.0 4.5E-38 9.7E-43 278.0 29.9 294 2-313 16-367 (367)
66 cd08289 MDR_yhfp_like Yhfp put 100.0 6.4E-38 1.4E-42 273.0 30.4 300 2-314 18-326 (326)
67 cd08270 MDR4 Medium chain dehy 100.0 1.4E-37 3E-42 268.4 30.9 286 2-314 17-305 (305)
68 PRK09422 ethanol-active dehydr 100.0 9.2E-38 2E-42 273.3 29.8 291 1-314 15-336 (338)
69 COG2130 Putative NADP-dependen 100.0 7.7E-38 1.7E-42 252.4 26.5 294 1-314 29-338 (340)
70 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.7E-37 3.7E-42 272.8 30.6 292 1-312 14-350 (350)
71 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.7E-37 3.7E-42 271.5 30.2 291 2-314 15-337 (337)
72 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2E-37 4.4E-42 271.5 30.7 293 2-313 14-341 (341)
73 cd08243 quinone_oxidoreductase 100.0 4.1E-37 8.8E-42 267.1 30.8 291 3-312 19-319 (320)
74 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.9E-37 8.3E-42 270.1 30.5 292 2-313 16-344 (345)
75 cd08286 FDH_like_ADH2 formalde 100.0 4.3E-37 9.2E-42 269.8 30.6 294 2-314 15-345 (345)
76 cd05276 p53_inducible_oxidored 100.0 6.4E-37 1.4E-41 265.9 31.2 303 3-312 19-323 (323)
77 cd08279 Zn_ADH_class_III Class 100.0 2.8E-37 6E-42 272.5 29.2 291 2-307 16-359 (363)
78 cd08235 iditol_2_DH_like L-idi 100.0 5.4E-37 1.2E-41 269.0 30.7 291 2-313 15-343 (343)
79 cd08249 enoyl_reductase_like e 100.0 2.5E-37 5.3E-42 270.5 28.4 297 1-314 16-339 (339)
80 cd08284 FDH_like_2 Glutathione 100.0 4.8E-37 1E-41 269.5 30.3 291 1-313 14-343 (344)
81 PRK13771 putative alcohol dehy 100.0 2.4E-37 5.1E-42 270.3 28.2 291 1-314 15-333 (334)
82 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 7.3E-37 1.6E-41 267.6 31.0 294 2-314 17-338 (338)
83 cd08288 MDR_yhdh Yhdh putative 100.0 1.2E-36 2.5E-41 264.9 31.9 299 2-314 18-324 (324)
84 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.8E-37 1.7E-41 266.8 30.4 290 2-313 16-332 (332)
85 cd08269 Zn_ADH9 Alcohol dehydr 100.0 6.8E-37 1.5E-41 264.9 29.5 294 2-312 10-311 (312)
86 cd05286 QOR2 Quinone oxidoredu 100.0 2.6E-36 5.6E-41 261.7 33.2 301 3-314 18-320 (320)
87 cd08252 AL_MDR Arginate lyase 100.0 1.2E-36 2.6E-41 266.1 31.3 301 2-313 21-336 (336)
88 cd08253 zeta_crystallin Zeta-c 100.0 1.8E-36 3.9E-41 263.4 32.2 302 2-314 18-325 (325)
89 cd08251 polyketide_synthase po 100.0 3.5E-36 7.5E-41 259.2 31.9 298 6-312 2-303 (303)
90 cd08232 idonate-5-DH L-idonate 100.0 1.5E-36 3.2E-41 265.8 30.0 290 2-314 12-339 (339)
91 cd08276 MDR7 Medium chain dehy 100.0 3.3E-36 7.3E-41 263.2 32.0 295 3-314 19-336 (336)
92 cd08236 sugar_DH NAD(P)-depend 100.0 1.7E-36 3.8E-41 265.8 29.6 295 2-312 15-343 (343)
93 cd08282 PFDH_like Pseudomonas 100.0 2E-36 4.4E-41 267.9 30.3 290 2-314 15-375 (375)
94 cd05285 sorbitol_DH Sorbitol d 100.0 2.4E-36 5.2E-41 264.8 30.1 292 2-313 13-342 (343)
95 cd08266 Zn_ADH_like1 Alcohol d 100.0 6.2E-36 1.3E-40 262.0 31.8 296 3-314 19-342 (342)
96 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.9E-36 6.3E-41 267.7 29.3 292 2-312 42-383 (384)
97 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.7E-36 5.9E-41 262.6 28.4 282 2-310 17-324 (325)
98 cd08287 FDH_like_ADH3 formalde 100.0 4.3E-36 9.4E-41 263.5 29.4 293 1-314 14-345 (345)
99 cd08273 MDR8 Medium chain dehy 100.0 1E-35 2.3E-40 259.6 31.5 297 2-312 18-330 (331)
100 cd08268 MDR2 Medium chain dehy 100.0 1.8E-35 3.9E-40 257.5 32.9 304 3-314 19-328 (328)
101 TIGR02824 quinone_pig3 putativ 100.0 1.5E-35 3.2E-40 257.7 32.2 305 3-314 19-325 (325)
102 PLN02702 L-idonate 5-dehydroge 100.0 8.6E-36 1.9E-40 263.2 30.9 293 2-314 32-364 (364)
103 PRK05396 tdh L-threonine 3-deh 100.0 6.7E-36 1.5E-40 261.8 30.0 293 2-314 16-340 (341)
104 cd08272 MDR6 Medium chain dehy 100.0 1.5E-35 3.1E-40 257.9 31.4 302 2-314 18-326 (326)
105 cd08298 CAD2 Cinnamyl alcohol 100.0 1.8E-35 3.9E-40 257.9 29.6 281 3-312 21-329 (329)
106 TIGR00692 tdh L-threonine 3-de 100.0 3.4E-35 7.4E-40 257.2 30.8 292 2-314 14-340 (340)
107 cd08242 MDR_like Medium chain 100.0 1.5E-35 3.3E-40 257.3 28.3 275 1-314 14-319 (319)
108 cd05288 PGDH Prostaglandin deh 100.0 3.1E-35 6.8E-40 256.4 30.0 293 2-312 23-329 (329)
109 cd08234 threonine_DH_like L-th 100.0 4.8E-35 1E-39 255.8 30.6 286 2-312 15-333 (334)
110 cd08245 CAD Cinnamyl alcohol d 100.0 4.3E-35 9.4E-40 255.6 29.8 288 2-312 15-330 (330)
111 cd08248 RTN4I1 Human Reticulon 100.0 9E-36 1.9E-40 262.0 25.2 302 1-313 18-350 (350)
112 cd08271 MDR5 Medium chain dehy 100.0 2.7E-34 5.9E-39 249.9 32.6 301 2-314 18-325 (325)
113 cd08247 AST1_like AST1 is a cy 100.0 9.8E-35 2.1E-39 255.5 29.4 301 3-314 17-352 (352)
114 cd05195 enoyl_red enoyl reduct 100.0 3.1E-34 6.8E-39 245.4 30.9 288 12-312 1-293 (293)
115 cd05281 TDH Threonine dehydrog 100.0 1.3E-34 2.9E-39 253.5 29.1 292 2-314 16-341 (341)
116 cd08275 MDR3 Medium chain dehy 100.0 3.6E-34 7.7E-39 250.4 31.2 302 3-314 18-337 (337)
117 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.3E-34 2.8E-39 249.6 27.8 261 2-279 17-306 (306)
118 cd08241 QOR1 Quinone oxidoredu 100.0 9.5E-34 2.1E-38 246.0 31.6 302 3-313 19-323 (323)
119 TIGR03366 HpnZ_proposed putati 100.0 2E-34 4.4E-39 245.2 24.1 233 44-293 1-280 (280)
120 cd08267 MDR1 Medium chain dehy 100.0 1.6E-33 3.4E-38 244.5 30.1 294 1-312 16-319 (319)
121 smart00829 PKS_ER Enoylreducta 100.0 3E-33 6.5E-38 238.9 29.8 282 16-312 2-288 (288)
122 cd05289 MDR_like_2 alcohol deh 100.0 3.3E-33 7.2E-38 241.2 28.5 287 2-312 18-309 (309)
123 cd05188 MDR Medium chain reduc 100.0 3.1E-32 6.8E-37 230.8 26.4 236 13-255 1-260 (271)
124 KOG1196 Predicted NAD-dependen 100.0 1.1E-30 2.3E-35 210.4 26.5 290 7-314 33-340 (343)
125 KOG1202 Animal-type fatty acid 100.0 2E-31 4.4E-36 245.3 16.1 287 10-314 1443-1741(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 3.1E-29 6.8E-34 213.4 23.8 258 33-312 14-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.8 3.2E-19 6.9E-24 129.4 8.1 83 11-93 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 2.2E-17 4.7E-22 124.1 12.4 115 136-255 1-117 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 1.2E-14 2.6E-19 108.6 4.7 122 172-312 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 6.6E-12 1.4E-16 110.4 13.8 175 110-313 186-375 (413)
131 PRK09424 pntA NAD(P) transhydr 99.4 2.8E-11 6.1E-16 109.1 17.8 230 11-252 30-313 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.7 2E-06 4.4E-11 77.8 16.9 125 123-252 162-312 (511)
133 PRK11873 arsM arsenite S-adeno 98.4 2E-06 4.4E-11 72.9 9.0 165 120-307 73-255 (272)
134 PRK08306 dipicolinate synthase 98.3 4E-05 8.7E-10 65.5 14.6 110 124-250 151-261 (296)
135 PF11017 DUF2855: Protein of u 98.2 0.001 2.2E-08 56.5 20.6 242 43-305 32-312 (314)
136 PLN02494 adenosylhomocysteinas 98.2 4.3E-05 9.4E-10 68.2 13.0 100 112-228 240-342 (477)
137 PRK05476 S-adenosyl-L-homocyst 98.1 3.4E-05 7.3E-10 68.7 11.8 104 110-230 196-302 (425)
138 TIGR00518 alaDH alanine dehydr 98.1 0.00022 4.7E-09 63.0 16.6 149 124-282 166-330 (370)
139 PRK12742 oxidoreductase; Provi 98.1 9.3E-05 2E-09 61.2 12.6 104 124-231 5-135 (237)
140 TIGR00936 ahcY adenosylhomocys 98.0 5E-05 1.1E-09 67.2 10.7 103 110-229 179-284 (406)
141 KOG1205 Predicted dehydrogenas 98.0 0.0001 2.2E-09 61.7 10.9 108 124-232 11-154 (282)
142 PRK05786 fabG 3-ketoacyl-(acyl 98.0 0.00012 2.6E-09 60.6 11.3 103 124-230 4-138 (238)
143 PRK12771 putative glutamate sy 97.9 3.9E-05 8.5E-10 71.9 8.8 100 121-227 133-253 (564)
144 PRK08324 short chain dehydroge 97.9 0.00012 2.5E-09 70.3 11.6 139 77-230 385-560 (681)
145 PRK00517 prmA ribosomal protei 97.9 0.00023 5E-09 59.5 11.5 142 61-228 65-214 (250)
146 COG4221 Short-chain alcohol de 97.8 0.00016 3.4E-09 58.6 9.3 80 124-207 5-91 (246)
147 PTZ00075 Adenosylhomocysteinas 97.8 0.00063 1.4E-08 61.1 13.7 102 111-229 239-343 (476)
148 TIGR02853 spore_dpaA dipicolin 97.8 0.00069 1.5E-08 57.6 13.4 95 124-232 150-245 (287)
149 COG3967 DltE Short-chain dehyd 97.8 0.00019 4E-09 56.4 8.8 80 124-207 4-88 (245)
150 cd05213 NAD_bind_Glutamyl_tRNA 97.8 0.00018 3.9E-09 62.1 9.1 109 88-210 139-251 (311)
151 PRK05693 short chain dehydroge 97.7 0.00098 2.1E-08 56.5 12.9 78 126-207 2-82 (274)
152 COG2518 Pcm Protein-L-isoaspar 97.7 0.00045 9.9E-09 54.9 9.3 104 118-228 66-170 (209)
153 PRK06182 short chain dehydroge 97.6 0.0014 2.9E-08 55.6 12.8 80 124-207 2-84 (273)
154 PRK07109 short chain dehydroge 97.6 0.00077 1.7E-08 58.9 11.4 84 124-207 7-95 (334)
155 PF13460 NAD_binding_10: NADH( 97.6 0.00059 1.3E-08 54.0 9.6 93 128-230 1-100 (183)
156 PRK05993 short chain dehydroge 97.6 0.0014 3.1E-08 55.7 12.3 80 124-207 3-86 (277)
157 PLN03209 translocon at the inn 97.6 0.00097 2.1E-08 61.4 11.6 106 118-230 73-210 (576)
158 COG0300 DltE Short-chain dehyd 97.6 0.00058 1.2E-08 56.8 9.0 81 123-207 4-94 (265)
159 PRK00045 hemA glutamyl-tRNA re 97.6 0.0023 5E-08 57.8 13.6 152 43-209 90-254 (423)
160 PRK06505 enoyl-(acyl carrier p 97.5 0.0013 2.9E-08 55.7 11.4 83 124-207 6-95 (271)
161 PRK07533 enoyl-(acyl carrier p 97.5 0.0016 3.4E-08 54.8 11.7 106 124-230 9-151 (258)
162 PRK06139 short chain dehydroge 97.5 0.0005 1.1E-08 59.9 8.2 80 124-207 6-94 (330)
163 PRK08339 short chain dehydroge 97.5 0.002 4.4E-08 54.3 11.3 80 124-207 7-95 (263)
164 PRK08415 enoyl-(acyl carrier p 97.5 0.0023 5E-08 54.3 11.7 106 124-230 4-146 (274)
165 PRK12939 short chain dehydroge 97.4 0.0018 3.8E-08 54.0 10.8 84 124-207 6-94 (250)
166 COG2230 Cfa Cyclopropane fatty 97.4 0.001 2.3E-08 55.6 9.1 105 109-230 57-179 (283)
167 PRK07060 short chain dehydroge 97.4 0.0013 2.7E-08 54.7 9.5 78 124-207 8-87 (245)
168 PRK13394 3-hydroxybutyrate deh 97.4 0.0035 7.6E-08 52.6 12.2 84 124-207 6-94 (262)
169 PRK07832 short chain dehydroge 97.4 0.0029 6.2E-08 53.6 11.7 82 126-207 1-88 (272)
170 PF01488 Shikimate_DH: Shikima 97.4 0.0013 2.8E-08 49.4 8.3 94 123-228 10-110 (135)
171 PRK06196 oxidoreductase; Provi 97.4 0.0026 5.5E-08 55.2 11.4 80 124-207 25-109 (315)
172 PRK08265 short chain dehydroge 97.4 0.0039 8.4E-08 52.4 12.2 80 124-207 5-90 (261)
173 KOG1201 Hydroxysteroid 17-beta 97.4 0.0021 4.5E-08 53.7 9.8 84 124-207 37-124 (300)
174 PRK06128 oxidoreductase; Provi 97.4 0.0042 9.1E-08 53.4 12.3 107 124-230 54-194 (300)
175 PRK07806 short chain dehydroge 97.4 0.0052 1.1E-07 51.1 12.5 105 124-228 5-135 (248)
176 PRK07062 short chain dehydroge 97.3 0.0051 1.1E-07 51.8 12.5 84 124-207 7-97 (265)
177 PRK07326 short chain dehydroge 97.3 0.0026 5.6E-08 52.5 10.4 80 124-207 5-92 (237)
178 PF02353 CMAS: Mycolic acid cy 97.3 0.00037 8.1E-09 58.8 5.0 101 112-226 50-165 (273)
179 PRK05872 short chain dehydroge 97.3 0.0018 4E-08 55.5 9.0 80 124-207 8-95 (296)
180 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.0065 1.4E-07 55.5 13.0 83 124-207 209-294 (450)
181 PRK12829 short chain dehydroge 97.2 0.005 1.1E-07 51.7 11.2 83 122-208 8-97 (264)
182 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.0062 1.3E-07 48.8 11.2 77 124-209 27-109 (194)
183 PRK08267 short chain dehydroge 97.2 0.0066 1.4E-07 50.9 11.7 78 126-207 2-87 (260)
184 PRK06181 short chain dehydroge 97.2 0.0042 9.1E-08 52.2 10.5 83 125-207 1-88 (263)
185 PRK05866 short chain dehydroge 97.2 0.0024 5.2E-08 54.8 9.0 80 124-207 39-127 (293)
186 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0051 1.1E-07 51.2 10.9 80 124-207 4-91 (251)
187 PRK09072 short chain dehydroge 97.2 0.0045 9.8E-08 52.1 10.5 80 124-207 4-90 (263)
188 PRK06463 fabG 3-ketoacyl-(acyl 97.2 0.011 2.4E-07 49.4 12.8 81 124-207 6-89 (255)
189 PRK06198 short chain dehydroge 97.2 0.0067 1.4E-07 50.9 11.5 84 124-207 5-94 (260)
190 PRK00377 cbiT cobalt-precorrin 97.2 0.0074 1.6E-07 48.5 11.0 99 119-226 35-144 (198)
191 TIGR01470 cysG_Nterm siroheme 97.2 0.022 4.8E-07 45.9 13.7 115 124-251 8-124 (205)
192 PRK12938 acetyacetyl-CoA reduc 97.2 0.0061 1.3E-07 50.6 10.9 82 124-207 2-91 (246)
193 PRK08594 enoyl-(acyl carrier p 97.2 0.011 2.5E-07 49.5 12.6 106 124-230 6-150 (257)
194 PRK06079 enoyl-(acyl carrier p 97.2 0.007 1.5E-07 50.6 11.2 103 124-230 6-146 (252)
195 TIGR01035 hemA glutamyl-tRNA r 97.2 0.044 9.5E-07 49.5 16.9 143 43-209 88-252 (417)
196 PRK09291 short chain dehydroge 97.1 0.0027 6E-08 53.1 8.8 77 125-207 2-83 (257)
197 PRK08217 fabG 3-ketoacyl-(acyl 97.1 0.0025 5.5E-08 53.1 8.4 84 124-207 4-92 (253)
198 PRK12823 benD 1,6-dihydroxycyc 97.1 0.012 2.6E-07 49.3 12.3 83 124-207 7-94 (260)
199 PRK12828 short chain dehydroge 97.1 0.0041 8.8E-08 51.3 9.2 84 124-207 6-92 (239)
200 PRK06057 short chain dehydroge 97.1 0.0037 8.1E-08 52.3 9.0 80 124-207 6-89 (255)
201 PRK06914 short chain dehydroge 97.1 0.0068 1.5E-07 51.5 10.7 83 125-207 3-91 (280)
202 PRK06125 short chain dehydroge 97.1 0.0038 8.1E-08 52.4 8.9 80 124-207 6-91 (259)
203 PRK06718 precorrin-2 dehydroge 97.1 0.029 6.3E-07 45.2 13.4 115 124-251 9-124 (202)
204 PLN02657 3,8-divinyl protochlo 97.1 0.0097 2.1E-07 53.2 11.8 110 121-230 56-184 (390)
205 PRK06701 short chain dehydroge 97.1 0.014 3.1E-07 49.9 12.4 107 124-230 45-184 (290)
206 COG1179 Dinucleotide-utilizing 97.0 0.0089 1.9E-07 48.4 10.1 105 124-231 29-157 (263)
207 PRK07478 short chain dehydroge 97.0 0.0048 1E-07 51.6 9.2 84 124-207 5-93 (254)
208 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.013 2.7E-07 45.6 10.7 99 102-230 21-119 (168)
209 PRK08340 glucose-1-dehydrogena 97.0 0.0029 6.3E-08 53.1 7.9 77 127-207 2-86 (259)
210 PRK09242 tropinone reductase; 97.0 0.011 2.3E-07 49.6 11.3 35 124-158 8-42 (257)
211 PRK14175 bifunctional 5,10-met 97.0 0.012 2.6E-07 49.7 11.3 97 103-230 136-233 (286)
212 PRK06484 short chain dehydroge 97.0 0.0063 1.4E-07 56.7 10.7 103 124-230 268-403 (520)
213 PRK07831 short chain dehydroge 97.0 0.0055 1.2E-07 51.5 9.5 86 122-207 14-107 (262)
214 PRK12367 short chain dehydroge 97.0 0.005 1.1E-07 51.3 9.1 77 124-207 13-89 (245)
215 PRK07814 short chain dehydroge 97.0 0.0046 9.9E-08 52.1 8.9 80 124-207 9-97 (263)
216 PRK07370 enoyl-(acyl carrier p 97.0 0.014 2.9E-07 49.1 11.6 107 124-230 5-150 (258)
217 PRK06949 short chain dehydroge 97.0 0.0056 1.2E-07 51.2 9.3 81 123-207 7-96 (258)
218 PRK12937 short chain dehydroge 97.0 0.017 3.7E-07 47.8 12.2 106 124-229 4-141 (245)
219 PRK07904 short chain dehydroge 97.0 0.0069 1.5E-07 50.7 9.7 86 121-207 4-97 (253)
220 COG0373 HemA Glutamyl-tRNA red 97.0 0.075 1.6E-06 47.2 16.2 106 112-229 165-276 (414)
221 PRK05854 short chain dehydroge 97.0 0.0042 9.1E-08 53.8 8.5 84 124-207 13-103 (313)
222 PRK08219 short chain dehydroge 97.0 0.019 4E-07 47.0 12.1 77 126-207 4-81 (227)
223 PRK06484 short chain dehydroge 97.0 0.015 3.1E-07 54.3 12.7 80 124-207 4-89 (520)
224 PRK06194 hypothetical protein; 97.0 0.0061 1.3E-07 52.0 9.4 83 125-207 6-93 (287)
225 PRK06719 precorrin-2 dehydroge 97.0 0.021 4.6E-07 43.9 11.4 112 124-251 12-124 (157)
226 PRK05867 short chain dehydroge 97.0 0.0047 1E-07 51.6 8.5 84 124-207 8-96 (253)
227 PRK12747 short chain dehydroge 97.0 0.02 4.4E-07 47.7 12.3 33 124-156 3-35 (252)
228 PRK07825 short chain dehydroge 97.0 0.0061 1.3E-07 51.6 9.1 79 125-207 5-88 (273)
229 PRK07985 oxidoreductase; Provi 96.9 0.018 4E-07 49.3 12.0 105 124-230 48-188 (294)
230 PRK05876 short chain dehydroge 96.9 0.0063 1.4E-07 51.6 9.1 80 124-207 5-93 (275)
231 PRK06172 short chain dehydroge 96.9 0.0065 1.4E-07 50.7 9.1 84 124-207 6-94 (253)
232 TIGR00406 prmA ribosomal prote 96.9 0.0072 1.6E-07 51.6 9.2 143 63-227 106-259 (288)
233 KOG1210 Predicted 3-ketosphing 96.9 0.021 4.6E-07 48.1 11.5 84 120-207 28-122 (331)
234 KOG0725 Reductases with broad 96.9 0.0071 1.5E-07 51.0 9.0 81 123-207 6-99 (270)
235 PRK12481 2-deoxy-D-gluconate 3 96.9 0.0086 1.9E-07 50.0 9.6 82 124-207 7-93 (251)
236 PRK06200 2,3-dihydroxy-2,3-dih 96.9 0.0051 1.1E-07 51.7 8.2 80 124-207 5-90 (263)
237 PRK07576 short chain dehydroge 96.9 0.0066 1.4E-07 51.1 8.8 84 124-207 8-96 (264)
238 KOG1610 Corticosteroid 11-beta 96.9 0.027 5.8E-07 47.6 11.9 108 122-231 26-168 (322)
239 PRK07677 short chain dehydroge 96.9 0.0054 1.2E-07 51.2 8.1 83 125-207 1-88 (252)
240 TIGR02622 CDP_4_6_dhtase CDP-g 96.9 0.011 2.3E-07 52.1 10.3 82 124-207 3-85 (349)
241 PF02826 2-Hacid_dh_C: D-isome 96.9 0.012 2.7E-07 46.3 9.6 120 123-294 34-160 (178)
242 PRK08862 short chain dehydroge 96.9 0.0075 1.6E-07 49.6 8.7 83 124-206 4-92 (227)
243 CHL00194 ycf39 Ycf39; Provisio 96.9 0.021 4.5E-07 49.6 11.9 95 127-229 2-111 (317)
244 PRK11705 cyclopropane fatty ac 96.9 0.0074 1.6E-07 53.7 9.2 107 109-227 152-267 (383)
245 PRK06483 dihydromonapterin red 96.9 0.0084 1.8E-07 49.5 9.1 80 125-207 2-84 (236)
246 PRK07523 gluconate 5-dehydroge 96.9 0.0084 1.8E-07 50.1 9.1 84 124-207 9-97 (255)
247 PRK08263 short chain dehydroge 96.9 0.021 4.6E-07 48.3 11.7 79 125-207 3-87 (275)
248 PF02670 DXP_reductoisom: 1-de 96.8 0.044 9.4E-07 40.4 11.5 96 128-225 1-119 (129)
249 PLN02780 ketoreductase/ oxidor 96.8 0.0084 1.8E-07 52.1 9.2 79 124-207 52-142 (320)
250 PRK07890 short chain dehydroge 96.8 0.0073 1.6E-07 50.5 8.6 80 124-207 4-92 (258)
251 PRK06720 hypothetical protein; 96.8 0.013 2.8E-07 45.7 9.4 84 124-207 15-103 (169)
252 TIGR03325 BphB_TodD cis-2,3-di 96.8 0.0064 1.4E-07 51.1 8.3 79 124-206 4-88 (262)
253 PRK08264 short chain dehydroge 96.8 0.01 2.2E-07 49.0 9.4 77 124-207 5-83 (238)
254 PRK08589 short chain dehydroge 96.8 0.0095 2.1E-07 50.4 9.3 83 124-207 5-92 (272)
255 PRK06197 short chain dehydroge 96.8 0.0054 1.2E-07 52.9 7.9 35 124-158 15-49 (306)
256 PRK08628 short chain dehydroge 96.8 0.0083 1.8E-07 50.2 8.8 83 124-207 6-93 (258)
257 PRK06138 short chain dehydroge 96.8 0.0062 1.4E-07 50.7 8.0 80 124-207 4-91 (252)
258 PRK07774 short chain dehydroge 96.8 0.0077 1.7E-07 50.1 8.6 35 124-158 5-39 (250)
259 PRK08690 enoyl-(acyl carrier p 96.8 0.008 1.7E-07 50.5 8.7 83 124-207 5-94 (261)
260 PF00670 AdoHcyase_NAD: S-aden 96.8 0.061 1.3E-06 41.2 12.4 101 111-228 8-111 (162)
261 PRK06935 2-deoxy-D-gluconate 3 96.8 0.013 2.8E-07 49.1 9.9 83 124-207 14-101 (258)
262 PRK07791 short chain dehydroge 96.8 0.013 2.8E-07 50.1 10.0 85 123-207 4-102 (286)
263 PRK06398 aldose dehydrogenase; 96.8 0.019 4.1E-07 48.2 10.8 74 124-207 5-82 (258)
264 PF05368 NmrA: NmrA-like famil 96.8 0.017 3.6E-07 47.6 10.3 74 128-207 1-74 (233)
265 COG1748 LYS9 Saccharopine dehy 96.8 0.014 3.1E-07 51.3 10.2 94 126-227 2-99 (389)
266 PF01262 AlaDh_PNT_C: Alanine 96.8 0.011 2.3E-07 46.2 8.6 102 125-234 20-146 (168)
267 PRK08177 short chain dehydroge 96.8 0.0079 1.7E-07 49.3 8.3 77 126-207 2-81 (225)
268 COG3288 PntA NAD/NADP transhyd 96.8 0.085 1.9E-06 44.4 13.9 154 121-279 160-336 (356)
269 PRK07063 short chain dehydroge 96.8 0.0095 2.1E-07 50.0 8.8 84 124-207 6-96 (260)
270 PRK08159 enoyl-(acyl carrier p 96.8 0.01 2.2E-07 50.3 9.0 84 123-207 8-98 (272)
271 PRK13943 protein-L-isoaspartat 96.8 0.015 3.2E-07 50.3 10.0 99 118-226 74-179 (322)
272 PRK06940 short chain dehydroge 96.8 0.025 5.4E-07 48.0 11.3 104 125-230 2-128 (275)
273 PRK07035 short chain dehydroge 96.7 0.0085 1.8E-07 50.0 8.4 84 124-207 7-95 (252)
274 TIGR01832 kduD 2-deoxy-D-gluco 96.7 0.016 3.4E-07 48.2 10.0 82 124-207 4-90 (248)
275 PRK08213 gluconate 5-dehydroge 96.7 0.0098 2.1E-07 49.8 8.7 80 124-207 11-99 (259)
276 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.014 3E-07 48.3 9.5 84 124-207 4-92 (246)
277 PRK08277 D-mannonate oxidoredu 96.7 0.0096 2.1E-07 50.5 8.6 83 124-206 9-96 (278)
278 PRK12826 3-ketoacyl-(acyl-carr 96.7 0.0093 2E-07 49.6 8.4 84 124-207 5-93 (251)
279 PRK08643 acetoin reductase; Va 96.7 0.013 2.8E-07 49.0 9.2 83 125-207 2-89 (256)
280 PRK05717 oxidoreductase; Valid 96.7 0.017 3.6E-07 48.3 9.8 81 124-207 9-94 (255)
281 PRK06500 short chain dehydroge 96.7 0.016 3.6E-07 48.1 9.7 80 124-207 5-90 (249)
282 KOG1209 1-Acyl dihydroxyaceton 96.7 0.028 6.1E-07 44.7 10.0 101 124-230 6-141 (289)
283 PRK07024 short chain dehydroge 96.7 0.0093 2E-07 50.0 8.2 79 125-207 2-88 (257)
284 PRK06180 short chain dehydroge 96.7 0.017 3.6E-07 49.0 9.8 80 124-207 3-88 (277)
285 PLN02730 enoyl-[acyl-carrier-p 96.7 0.033 7.2E-07 47.9 11.5 31 124-154 8-40 (303)
286 PRK06841 short chain dehydroge 96.7 0.016 3.5E-07 48.4 9.5 80 124-207 14-99 (255)
287 PRK08703 short chain dehydroge 96.7 0.0095 2.1E-07 49.3 8.0 35 124-158 5-39 (239)
288 PRK06179 short chain dehydroge 96.7 0.0092 2E-07 50.4 8.1 78 124-207 3-83 (270)
289 PRK08017 oxidoreductase; Provi 96.7 0.013 2.8E-07 48.9 8.9 76 126-207 3-84 (256)
290 PRK08085 gluconate 5-dehydroge 96.7 0.015 3.3E-07 48.5 9.3 84 124-207 8-96 (254)
291 PRK06603 enoyl-(acyl carrier p 96.7 0.012 2.6E-07 49.4 8.7 83 124-207 7-96 (260)
292 PF01135 PCMT: Protein-L-isoas 96.7 0.0063 1.4E-07 49.1 6.6 104 117-228 65-173 (209)
293 COG1648 CysG Siroheme synthase 96.7 0.051 1.1E-06 43.9 11.7 116 124-252 11-128 (210)
294 PRK07454 short chain dehydroge 96.7 0.014 3E-07 48.3 8.9 80 124-207 5-93 (241)
295 PRK06997 enoyl-(acyl carrier p 96.6 0.0098 2.1E-07 50.0 8.0 83 124-207 5-94 (260)
296 PRK12746 short chain dehydroge 96.6 0.036 7.9E-07 46.2 11.5 33 124-156 5-37 (254)
297 PRK06077 fabG 3-ketoacyl-(acyl 96.6 0.028 6.1E-07 46.7 10.8 104 125-230 6-143 (252)
298 PLN02253 xanthoxin dehydrogena 96.6 0.012 2.5E-07 50.1 8.6 81 124-207 17-104 (280)
299 PRK08063 enoyl-(acyl carrier p 96.6 0.0097 2.1E-07 49.5 7.9 84 124-207 3-92 (250)
300 PLN00141 Tic62-NAD(P)-related 96.6 0.039 8.4E-07 46.1 11.5 100 124-230 16-134 (251)
301 PRK07984 enoyl-(acyl carrier p 96.6 0.018 3.8E-07 48.5 9.5 83 124-207 5-94 (262)
302 PRK06114 short chain dehydroge 96.6 0.024 5.3E-07 47.3 10.3 84 124-207 7-96 (254)
303 PRK08993 2-deoxy-D-gluconate 3 96.6 0.023 5E-07 47.5 10.0 82 124-207 9-95 (253)
304 PRK10538 malonic semialdehyde 96.6 0.065 1.4E-06 44.6 12.7 77 127-207 2-84 (248)
305 PRK07424 bifunctional sterol d 96.6 0.021 4.5E-07 51.1 10.0 77 124-207 177-255 (406)
306 PRK12429 3-hydroxybutyrate deh 96.6 0.018 3.9E-07 48.1 9.2 84 124-207 3-91 (258)
307 PRK07666 fabG 3-ketoacyl-(acyl 96.6 0.017 3.7E-07 47.7 9.0 84 124-207 6-94 (239)
308 PF00106 adh_short: short chai 96.6 0.016 3.4E-07 44.9 8.2 81 126-207 1-90 (167)
309 PRK08303 short chain dehydroge 96.6 0.024 5.1E-07 49.0 10.0 35 124-158 7-41 (305)
310 PRK13940 glutamyl-tRNA reducta 96.5 0.19 4.1E-06 45.2 15.7 77 122-210 178-255 (414)
311 PRK12384 sorbitol-6-phosphate 96.5 0.015 3.3E-07 48.7 8.5 34 125-158 2-35 (259)
312 PRK07453 protochlorophyllide o 96.5 0.02 4.3E-07 49.8 9.4 34 124-157 5-38 (322)
313 TIGR03206 benzo_BadH 2-hydroxy 96.5 0.019 4.2E-07 47.7 9.0 84 124-207 2-90 (250)
314 PRK06124 gluconate 5-dehydroge 96.5 0.018 3.9E-07 48.1 8.8 84 124-207 10-98 (256)
315 PRK05565 fabG 3-ketoacyl-(acyl 96.5 0.046 1E-06 45.2 11.2 33 125-157 5-38 (247)
316 PRK07097 gluconate 5-dehydroge 96.5 0.019 4.2E-07 48.3 9.0 84 124-207 9-97 (265)
317 PRK13656 trans-2-enoyl-CoA red 96.5 0.044 9.6E-07 48.2 11.2 85 123-208 39-142 (398)
318 PRK06101 short chain dehydroge 96.5 0.056 1.2E-06 44.7 11.6 77 126-206 2-80 (240)
319 PRK05447 1-deoxy-D-xylulose 5- 96.5 0.058 1.3E-06 47.4 11.8 98 126-225 2-120 (385)
320 PRK13942 protein-L-isoaspartat 96.5 0.026 5.6E-07 45.9 9.2 98 118-227 70-176 (212)
321 PRK05875 short chain dehydroge 96.5 0.014 3.1E-07 49.4 8.0 35 124-158 6-40 (276)
322 KOG1200 Mitochondrial/plastidi 96.5 0.03 6.5E-07 43.9 8.8 80 125-207 14-100 (256)
323 PRK07792 fabG 3-ketoacyl-(acyl 96.5 0.024 5.2E-07 48.9 9.5 83 124-207 11-99 (306)
324 PRK08945 putative oxoacyl-(acy 96.5 0.012 2.7E-07 48.8 7.5 86 122-207 9-102 (247)
325 PRK08416 7-alpha-hydroxysteroi 96.4 0.031 6.6E-07 46.9 9.8 34 124-157 7-40 (260)
326 PRK07775 short chain dehydroge 96.4 0.026 5.6E-07 47.8 9.4 84 124-207 9-97 (274)
327 PRK09186 flagellin modificatio 96.4 0.023 4.9E-07 47.4 9.0 35 124-158 3-37 (256)
328 PRK06113 7-alpha-hydroxysteroi 96.4 0.027 5.8E-07 47.1 9.3 80 124-207 10-98 (255)
329 PRK08278 short chain dehydroge 96.4 0.029 6.4E-07 47.5 9.5 35 124-158 5-39 (273)
330 PRK12743 oxidoreductase; Provi 96.4 0.024 5.2E-07 47.4 8.9 83 125-207 2-90 (256)
331 PRK07856 short chain dehydroge 96.4 0.022 4.7E-07 47.6 8.6 76 124-207 5-85 (252)
332 PRK08220 2,3-dihydroxybenzoate 96.4 0.063 1.4E-06 44.6 11.5 75 124-207 7-86 (252)
333 PRK08226 short chain dehydroge 96.4 0.023 5.1E-07 47.6 8.9 83 124-207 5-92 (263)
334 PRK10792 bifunctional 5,10-met 96.4 0.044 9.6E-07 46.2 10.1 96 103-229 137-233 (285)
335 PRK05650 short chain dehydroge 96.4 0.026 5.6E-07 47.7 9.1 82 126-207 1-87 (270)
336 TIGR00507 aroE shikimate 5-deh 96.4 0.039 8.3E-07 46.7 10.0 99 115-228 107-215 (270)
337 PRK14192 bifunctional 5,10-met 96.4 0.04 8.7E-07 46.7 10.0 96 105-230 139-234 (283)
338 PRK14189 bifunctional 5,10-met 96.4 0.037 8.1E-07 46.7 9.6 98 103-230 136-233 (285)
339 COG2264 PrmA Ribosomal protein 96.4 0.041 8.9E-07 46.6 9.8 148 62-229 108-265 (300)
340 PRK05562 precorrin-2 dehydroge 96.4 0.25 5.4E-06 40.2 14.0 116 124-252 24-141 (223)
341 PRK06482 short chain dehydroge 96.4 0.032 7E-07 47.2 9.5 78 126-207 3-86 (276)
342 PRK07074 short chain dehydroge 96.3 0.031 6.7E-07 46.7 9.2 79 125-207 2-87 (257)
343 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.009 1.9E-07 54.6 6.3 39 119-157 28-70 (450)
344 PF02882 THF_DHG_CYH_C: Tetrah 96.3 0.028 6.1E-07 43.2 7.9 97 103-229 14-110 (160)
345 KOG2017 Molybdopterin synthase 96.3 0.012 2.5E-07 50.1 6.2 83 124-210 65-169 (427)
346 PRK14191 bifunctional 5,10-met 96.3 0.073 1.6E-06 44.9 10.9 97 103-230 135-232 (285)
347 TIGR02356 adenyl_thiF thiazole 96.3 0.04 8.8E-07 44.4 9.2 35 124-159 20-54 (202)
348 PRK07069 short chain dehydroge 96.3 0.044 9.6E-07 45.5 9.8 31 128-158 2-32 (251)
349 PRK12936 3-ketoacyl-(acyl-carr 96.3 0.043 9.2E-07 45.4 9.6 80 124-207 5-90 (245)
350 PRK15181 Vi polysaccharide bio 96.3 0.04 8.6E-07 48.5 9.8 47 111-158 2-48 (348)
351 PRK07067 sorbitol dehydrogenas 96.2 0.033 7.3E-07 46.5 8.9 80 124-207 5-90 (257)
352 PRK09134 short chain dehydroge 96.2 0.036 7.8E-07 46.4 9.1 81 124-207 8-97 (258)
353 PLN02896 cinnamyl-alcohol dehy 96.2 0.034 7.4E-07 49.0 9.2 80 122-207 7-89 (353)
354 PLN02989 cinnamyl-alcohol dehy 96.2 0.044 9.6E-07 47.6 9.8 81 124-207 4-87 (325)
355 PRK12744 short chain dehydroge 96.2 0.045 9.7E-07 45.8 9.5 84 124-207 7-99 (257)
356 PRK08936 glucose-1-dehydrogena 96.2 0.041 9E-07 46.1 9.2 84 124-207 6-95 (261)
357 PRK09135 pteridine reductase; 96.2 0.047 1E-06 45.2 9.4 35 124-158 5-39 (249)
358 cd05212 NAD_bind_m-THF_DH_Cycl 96.2 0.078 1.7E-06 39.8 9.4 96 104-229 7-102 (140)
359 PRK05557 fabG 3-ketoacyl-(acyl 96.2 0.06 1.3E-06 44.5 10.0 84 124-207 4-93 (248)
360 PF00899 ThiF: ThiF family; I 96.1 0.054 1.2E-06 40.5 8.7 98 125-226 2-122 (135)
361 TIGR02415 23BDH acetoin reduct 96.1 0.044 9.5E-07 45.7 9.1 82 126-207 1-87 (254)
362 cd00755 YgdL_like Family of ac 96.1 0.11 2.3E-06 42.8 10.9 103 125-230 11-137 (231)
363 PRK14194 bifunctional 5,10-met 96.1 0.073 1.6E-06 45.3 10.1 96 103-229 137-233 (301)
364 TIGR02469 CbiT precorrin-6Y C5 96.1 0.063 1.4E-06 39.1 8.8 100 118-227 13-122 (124)
365 PRK14188 bifunctional 5,10-met 96.1 0.074 1.6E-06 45.3 10.2 97 103-230 136-233 (296)
366 PLN02240 UDP-glucose 4-epimera 96.1 0.054 1.2E-06 47.6 9.9 82 125-207 5-91 (352)
367 KOG1502 Flavonol reductase/cin 96.1 0.052 1.1E-06 46.5 9.2 80 124-207 5-88 (327)
368 PRK07578 short chain dehydroge 96.1 0.088 1.9E-06 42.1 10.4 64 127-207 2-65 (199)
369 PRK12825 fabG 3-ketoacyl-(acyl 96.1 0.046 9.9E-07 45.2 9.0 35 124-158 5-39 (249)
370 PRK08251 short chain dehydroge 96.1 0.034 7.3E-07 46.2 8.1 79 125-207 2-91 (248)
371 COG2242 CobL Precorrin-6B meth 96.1 0.091 2E-06 41.1 9.7 98 120-227 30-135 (187)
372 PF12847 Methyltransf_18: Meth 96.1 0.0097 2.1E-07 42.7 4.3 92 124-226 1-110 (112)
373 PRK06523 short chain dehydroge 96.1 0.019 4.2E-07 48.1 6.6 35 124-158 8-42 (260)
374 PLN02986 cinnamyl-alcohol dehy 96.0 0.06 1.3E-06 46.7 9.8 81 123-207 3-87 (322)
375 PRK05599 hypothetical protein; 96.0 0.042 9.2E-07 45.7 8.4 80 127-207 2-87 (246)
376 TIGR01289 LPOR light-dependent 96.0 0.061 1.3E-06 46.6 9.6 79 125-207 3-91 (314)
377 PRK12935 acetoacetyl-CoA reduc 96.0 0.069 1.5E-06 44.3 9.7 81 124-207 5-94 (247)
378 PRK13944 protein-L-isoaspartat 96.0 0.063 1.4E-06 43.4 9.1 99 117-227 65-173 (205)
379 PRK14176 bifunctional 5,10-met 96.0 0.087 1.9E-06 44.5 9.9 96 103-229 142-238 (287)
380 PRK06123 short chain dehydroge 96.0 0.055 1.2E-06 44.9 8.9 80 125-207 2-90 (248)
381 PRK07041 short chain dehydroge 96.0 0.032 6.9E-07 45.8 7.4 75 129-207 1-79 (230)
382 KOG1208 Dehydrogenases with di 96.0 0.053 1.1E-06 46.8 8.8 108 123-230 33-173 (314)
383 cd05311 NAD_bind_2_malic_enz N 95.9 0.27 5.9E-06 40.3 12.6 96 123-229 23-130 (226)
384 TIGR02355 moeB molybdopterin s 95.9 0.06 1.3E-06 44.6 8.8 86 125-214 24-131 (240)
385 PRK06947 glucose-1-dehydrogena 95.9 0.056 1.2E-06 44.9 8.8 79 126-207 3-90 (248)
386 PRK05855 short chain dehydroge 95.9 0.045 9.7E-07 51.6 9.1 80 124-207 314-402 (582)
387 PRK12745 3-ketoacyl-(acyl-carr 95.9 0.079 1.7E-06 44.2 9.7 83 125-207 2-90 (256)
388 TIGR01963 PHB_DH 3-hydroxybuty 95.9 0.056 1.2E-06 45.0 8.8 34 125-158 1-34 (255)
389 TIGR00080 pimt protein-L-isoas 95.9 0.08 1.7E-06 43.1 9.4 99 117-227 70-177 (215)
390 PRK14172 bifunctional 5,10-met 95.9 0.088 1.9E-06 44.3 9.6 97 104-230 137-233 (278)
391 PRK14177 bifunctional 5,10-met 95.9 0.091 2E-06 44.3 9.6 97 103-229 137-233 (284)
392 KOG1199 Short-chain alcohol de 95.9 0.043 9.4E-07 42.0 6.9 84 122-208 6-94 (260)
393 PF02254 TrkA_N: TrkA-N domain 95.9 0.28 6E-06 35.4 11.2 92 128-227 1-96 (116)
394 PF03435 Saccharop_dh: Sacchar 95.9 0.12 2.7E-06 46.1 11.2 93 128-227 1-98 (386)
395 PRK15116 sulfur acceptor prote 95.9 0.15 3.2E-06 42.9 10.8 104 124-230 29-156 (268)
396 PRK07201 short chain dehydroge 95.9 0.047 1E-06 52.5 9.0 79 125-207 371-458 (657)
397 PRK08642 fabG 3-ketoacyl-(acyl 95.9 0.066 1.4E-06 44.5 8.9 34 124-157 4-37 (253)
398 PRK12827 short chain dehydroge 95.9 0.09 1.9E-06 43.5 9.7 84 124-207 5-97 (249)
399 TIGR01179 galE UDP-glucose-4-e 95.8 0.053 1.1E-06 46.9 8.6 80 127-207 1-80 (328)
400 PRK14190 bifunctional 5,10-met 95.8 0.13 2.8E-06 43.5 10.3 98 103-230 136-233 (284)
401 PRK14180 bifunctional 5,10-met 95.8 0.1 2.2E-06 44.0 9.6 98 103-230 136-233 (282)
402 PRK07889 enoyl-(acyl carrier p 95.8 0.051 1.1E-06 45.5 8.1 82 124-207 6-95 (256)
403 PRK07102 short chain dehydroge 95.8 0.045 9.8E-07 45.3 7.8 33 126-158 2-34 (243)
404 PRK09730 putative NAD(P)-bindi 95.8 0.074 1.6E-06 44.0 9.0 79 126-207 2-89 (247)
405 PRK08328 hypothetical protein; 95.8 0.12 2.5E-06 42.7 9.9 35 124-159 26-60 (231)
406 PRK06171 sorbitol-6-phosphate 95.8 0.014 3.1E-07 49.1 4.7 77 124-207 8-87 (266)
407 PRK06953 short chain dehydroge 95.8 0.1 2.2E-06 42.6 9.7 77 126-207 2-80 (222)
408 TIGR01829 AcAcCoA_reduct aceto 95.8 0.07 1.5E-06 44.0 8.8 32 126-157 1-32 (242)
409 PRK14169 bifunctional 5,10-met 95.8 0.11 2.4E-06 43.8 9.7 98 103-230 134-231 (282)
410 COG4122 Predicted O-methyltran 95.8 0.087 1.9E-06 42.7 8.7 104 118-228 53-167 (219)
411 TIGR02685 pter_reduc_Leis pter 95.8 0.064 1.4E-06 45.2 8.5 32 126-157 2-33 (267)
412 PRK08309 short chain dehydroge 95.8 0.3 6.5E-06 38.4 11.6 96 127-227 2-111 (177)
413 PRK03369 murD UDP-N-acetylmura 95.7 0.074 1.6E-06 49.1 9.5 74 122-209 9-82 (488)
414 cd01079 NAD_bind_m-THF_DH NAD 95.7 0.11 2.4E-06 41.1 9.0 115 103-229 31-158 (197)
415 PRK05884 short chain dehydroge 95.7 0.069 1.5E-06 43.7 8.4 74 127-206 2-78 (223)
416 PLN02928 oxidoreductase family 95.7 0.063 1.4E-06 47.1 8.6 97 124-227 158-262 (347)
417 PLN00016 RNA-binding protein; 95.7 0.12 2.6E-06 46.1 10.4 101 124-229 51-166 (378)
418 PF01370 Epimerase: NAD depend 95.7 0.045 9.8E-07 44.9 7.3 76 128-208 1-76 (236)
419 PRK14179 bifunctional 5,10-met 95.7 0.12 2.5E-06 43.8 9.6 96 104-230 137-233 (284)
420 PLN00198 anthocyanidin reducta 95.7 0.078 1.7E-06 46.4 9.1 79 124-206 8-89 (338)
421 TIGR03589 PseB UDP-N-acetylglu 95.7 0.069 1.5E-06 46.5 8.7 77 124-207 3-84 (324)
422 PLN00203 glutamyl-tRNA reducta 95.7 1.6 3.4E-05 40.6 17.6 95 125-229 266-371 (519)
423 PRK12475 thiamine/molybdopteri 95.7 0.078 1.7E-06 46.3 8.8 84 124-211 23-130 (338)
424 PRK05690 molybdopterin biosynt 95.7 0.11 2.4E-06 43.2 9.3 36 124-160 31-66 (245)
425 PLN02662 cinnamyl-alcohol dehy 95.7 0.093 2E-06 45.5 9.4 35 124-158 3-37 (322)
426 PLN02695 GDP-D-mannose-3',5'-e 95.6 0.12 2.6E-06 46.0 10.0 37 122-158 18-54 (370)
427 PF01118 Semialdhyde_dh: Semia 95.6 0.097 2.1E-06 38.3 7.9 96 127-229 1-99 (121)
428 cd00757 ThiF_MoeB_HesA_family 95.6 0.1 2.2E-06 42.9 8.9 35 125-160 21-55 (228)
429 PLN02653 GDP-mannose 4,6-dehyd 95.6 0.051 1.1E-06 47.6 7.5 83 124-207 5-93 (340)
430 TIGR00438 rrmJ cell division p 95.6 0.15 3.3E-06 40.5 9.6 99 119-227 27-146 (188)
431 PRK14170 bifunctional 5,10-met 95.6 0.13 2.9E-06 43.3 9.5 98 103-230 135-232 (284)
432 PF06325 PrmA: Ribosomal prote 95.6 0.024 5.1E-07 48.3 5.1 145 63-230 108-262 (295)
433 PRK12824 acetoacetyl-CoA reduc 95.6 0.11 2.5E-06 42.8 9.3 80 126-207 3-90 (245)
434 PRK14178 bifunctional 5,10-met 95.6 0.19 4E-06 42.4 10.3 97 103-229 130-226 (279)
435 cd01065 NAD_bind_Shikimate_DH 95.6 0.18 3.8E-06 38.5 9.7 95 123-229 17-118 (155)
436 PRK07688 thiamine/molybdopteri 95.5 0.096 2.1E-06 45.8 8.8 82 125-210 24-129 (339)
437 PRK08223 hypothetical protein; 95.5 0.094 2E-06 44.4 8.4 36 124-160 26-61 (287)
438 PRK07023 short chain dehydroge 95.5 0.19 4.2E-06 41.5 10.4 33 126-158 2-34 (243)
439 cd05313 NAD_bind_2_Glu_DH NAD( 95.5 0.37 8E-06 40.1 11.7 34 123-157 36-69 (254)
440 PRK14187 bifunctional 5,10-met 95.5 0.15 3.2E-06 43.3 9.6 98 103-230 138-235 (294)
441 PRK10217 dTDP-glucose 4,6-dehy 95.5 0.093 2E-06 46.2 8.9 80 126-207 2-84 (355)
442 PRK14166 bifunctional 5,10-met 95.5 0.16 3.4E-06 42.9 9.6 98 103-230 135-232 (282)
443 PRK14173 bifunctional 5,10-met 95.5 0.15 3.2E-06 43.1 9.5 97 103-230 133-230 (287)
444 PLN02650 dihydroflavonol-4-red 95.5 0.12 2.7E-06 45.4 9.6 35 124-158 4-38 (351)
445 PRK08644 thiamine biosynthesis 95.5 0.11 2.3E-06 42.2 8.5 35 124-159 27-61 (212)
446 TIGR01181 dTDP_gluc_dehyt dTDP 95.5 0.077 1.7E-06 45.7 8.2 78 127-207 1-83 (317)
447 PRK10675 UDP-galactose-4-epime 95.5 0.15 3.1E-06 44.6 9.9 80 127-207 2-83 (338)
448 PLN02686 cinnamoyl-CoA reducta 95.4 0.12 2.6E-06 45.9 9.4 37 122-158 50-86 (367)
449 PRK12548 shikimate 5-dehydroge 95.4 0.18 3.9E-06 43.1 10.1 32 124-156 125-156 (289)
450 PRK07577 short chain dehydroge 95.4 0.11 2.4E-06 42.6 8.6 74 124-207 2-78 (234)
451 TIGR02632 RhaD_aldol-ADH rhamn 95.4 0.069 1.5E-06 51.4 8.2 80 124-207 413-503 (676)
452 COG2910 Putative NADH-flavin r 95.4 0.19 4.1E-06 39.2 8.9 93 127-229 2-106 (211)
453 PRK06300 enoyl-(acyl carrier p 95.4 0.13 2.9E-06 44.2 9.2 33 124-156 7-41 (299)
454 PF01113 DapB_N: Dihydrodipico 95.4 0.02 4.3E-07 42.2 3.6 95 127-229 2-99 (124)
455 PRK00258 aroE shikimate 5-dehy 95.4 0.19 4E-06 42.8 9.9 93 123-227 121-221 (278)
456 PLN02214 cinnamoyl-CoA reducta 95.4 0.15 3.2E-06 44.8 9.6 103 123-228 8-127 (342)
457 KOG1207 Diacetyl reductase/L-x 95.4 0.081 1.8E-06 40.7 6.7 80 124-207 6-87 (245)
458 PRK08618 ornithine cyclodeamin 95.3 0.62 1.4E-05 40.6 13.3 102 123-238 125-232 (325)
459 PRK14186 bifunctional 5,10-met 95.3 0.19 4E-06 42.8 9.6 97 103-230 136-233 (297)
460 PLN02516 methylenetetrahydrofo 95.3 0.2 4.4E-06 42.6 9.8 98 103-230 145-242 (299)
461 PLN02897 tetrahydrofolate dehy 95.3 0.16 3.5E-06 43.9 9.3 98 103-230 192-289 (345)
462 TIGR01532 E4PD_g-proteo D-eryt 95.3 0.18 3.9E-06 43.7 9.6 101 127-231 1-124 (325)
463 COG0031 CysK Cysteine synthase 95.3 0.17 3.6E-06 43.0 9.0 60 120-181 57-116 (300)
464 PRK04148 hypothetical protein; 95.3 0.61 1.3E-05 34.6 11.0 88 122-221 14-102 (134)
465 COG1028 FabG Dehydrogenases wi 95.3 0.16 3.6E-06 42.1 9.2 35 124-158 4-38 (251)
466 PRK12748 3-ketoacyl-(acyl-carr 95.2 0.19 4.1E-06 42.0 9.6 35 124-158 4-40 (256)
467 TIGR01472 gmd GDP-mannose 4,6- 95.2 0.11 2.4E-06 45.6 8.4 81 126-207 1-88 (343)
468 PLN02616 tetrahydrofolate dehy 95.2 0.17 3.7E-06 44.0 9.2 98 103-230 209-306 (364)
469 PRK14183 bifunctional 5,10-met 95.2 0.21 4.6E-06 42.1 9.5 98 103-230 135-232 (281)
470 PLN02589 caffeoyl-CoA O-methyl 95.2 0.24 5.1E-06 41.2 9.7 106 116-227 71-190 (247)
471 cd01075 NAD_bind_Leu_Phe_Val_D 95.2 0.54 1.2E-05 37.8 11.5 79 124-218 27-107 (200)
472 PRK10637 cysG siroheme synthas 95.1 0.8 1.7E-05 42.0 13.9 116 124-252 11-128 (457)
473 PRK12550 shikimate 5-dehydroge 95.1 0.23 5E-06 42.0 9.6 76 114-207 112-188 (272)
474 PRK14184 bifunctional 5,10-met 95.1 0.28 6.2E-06 41.5 10.0 98 103-230 135-236 (286)
475 COG0111 SerA Phosphoglycerate 95.1 0.16 3.5E-06 44.1 8.8 86 125-227 142-233 (324)
476 PRK05597 molybdopterin biosynt 95.1 0.15 3.3E-06 44.9 8.8 36 124-160 27-62 (355)
477 PRK14171 bifunctional 5,10-met 95.1 0.26 5.7E-06 41.7 9.7 98 103-230 137-234 (288)
478 TIGR02354 thiF_fam2 thiamine b 95.0 0.18 4E-06 40.5 8.5 34 125-159 21-54 (200)
479 PRK06550 fabG 3-ketoacyl-(acyl 95.0 0.18 3.8E-06 41.4 8.7 35 124-158 4-38 (235)
480 TIGR01318 gltD_gamma_fam gluta 95.0 0.14 2.9E-06 47.1 8.6 80 124-208 140-237 (467)
481 TIGR00715 precor6x_red precorr 95.0 0.086 1.9E-06 44.0 6.5 74 127-207 2-75 (256)
482 cd01483 E1_enzyme_family Super 95.0 0.21 4.5E-06 37.7 8.2 32 127-159 1-32 (143)
483 PF01596 Methyltransf_3: O-met 95.0 0.062 1.4E-06 43.3 5.5 106 117-228 38-156 (205)
484 PRK14185 bifunctional 5,10-met 94.9 0.28 6.1E-06 41.6 9.6 98 103-230 135-236 (293)
485 cd01487 E1_ThiF_like E1_ThiF_l 94.9 0.16 3.4E-06 39.9 7.6 33 127-160 1-33 (174)
486 TIGR01809 Shik-DH-AROM shikima 94.9 0.13 2.8E-06 43.8 7.7 76 124-208 124-201 (282)
487 KOG4169 15-hydroxyprostaglandi 94.9 0.079 1.7E-06 42.7 5.8 103 125-231 5-140 (261)
488 PRK08762 molybdopterin biosynt 94.9 0.17 3.6E-06 45.1 8.6 35 124-159 134-168 (376)
489 PLN02583 cinnamoyl-CoA reducta 94.9 0.3 6.6E-06 41.9 10.0 36 123-158 4-39 (297)
490 COG0334 GdhA Glutamate dehydro 94.9 0.84 1.8E-05 40.4 12.5 39 120-159 201-240 (411)
491 PLN02427 UDP-apiose/xylose syn 94.9 0.2 4.3E-06 44.8 9.2 76 124-206 13-95 (386)
492 PRK07502 cyclohexadienyl dehyd 94.9 0.28 6.1E-06 42.3 9.8 89 126-228 7-101 (307)
493 PF03807 F420_oxidored: NADP o 94.8 0.38 8.1E-06 33.3 8.8 86 127-226 1-93 (96)
494 COG0169 AroE Shikimate 5-dehyd 94.8 0.21 4.6E-06 42.3 8.6 92 123-227 124-226 (283)
495 PRK05600 thiamine biosynthesis 94.8 0.17 3.7E-06 44.8 8.4 35 124-159 40-74 (370)
496 PRK12549 shikimate 5-dehydroge 94.8 0.27 5.8E-06 41.9 9.3 93 123-227 125-227 (284)
497 PLN02476 O-methyltransferase 94.8 0.27 5.8E-06 41.6 9.1 107 116-228 110-229 (278)
498 PRK14181 bifunctional 5,10-met 94.8 0.34 7.3E-06 41.0 9.6 98 103-230 131-232 (287)
499 TIGR01830 3oxo_ACP_reduc 3-oxo 94.8 0.16 3.4E-06 41.7 7.9 80 128-207 1-86 (239)
500 PRK14193 bifunctional 5,10-met 94.8 0.32 6.9E-06 41.1 9.4 96 104-230 137-235 (284)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.3e-56 Score=375.67 Aligned_cols=290 Identities=28% Similarity=0.364 Sum_probs=262.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEee-CCCC----
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP-SPPS---- 75 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~-~~~~---- 75 (314)
|+|++.|+|+++||+|+|.|+|+|++|++.+.|.++.. .+|++||||.+|+|+++|++|++|++||||.. +...
T Consensus 18 i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~ 96 (339)
T COG1064 18 IEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGE 96 (339)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCC
Confidence 47899999999999999999999999999999999876 59999999999999999999999999999988 4321
Q ss_pred ----------------------CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 76 ----------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 76 ----------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
+|+|+||+++++.+++++|+++++..||.+.|++.|.|++|++ .+++||++|+|.|+
T Consensus 97 C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~-~~~~pG~~V~I~G~ 175 (339)
T COG1064 97 CEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVVGA 175 (339)
T ss_pred CccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhh-cCCCCCCEEEEECC
Confidence 9999999999999999999999999999999999999999988 99999999999999
Q ss_pred CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHH
Q 021311 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASK 212 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~ 212 (314)
|++|++++|+|+.+|++|+++.+ ++++.+.+++||++++++..+. ..+.+++ .+|+++|+++...++.
T Consensus 176 -GGlGh~avQ~Aka~ga~Via~~~----~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~------~~d~ii~tv~~~~~~~ 244 (339)
T COG1064 176 -GGLGHMAVQYAKAMGAEVIAITR----SEEKLELAKKLGADHVINSSDSDALEAVKE------IADAIIDTVGPATLEP 244 (339)
T ss_pred -cHHHHHHHHHHHHcCCeEEEEeC----ChHHHHHHHHhCCcEEEEcCCchhhHHhHh------hCcEEEECCChhhHHH
Confidence 79999999999999999999995 7899999999999999997743 3344544 2999999999556699
Q ss_pred HHHhcccCCEEEEEcCCC-CCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc-eeecc
Q 021311 213 VLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPF 290 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~ 290 (314)
++++|+++|+++++|... ....+++...++.+++++.|+..++. .++++++++..+|+++|.+ +.+++
T Consensus 245 ~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~----------~d~~e~l~f~~~g~Ikp~i~e~~~l 314 (339)
T COG1064 245 SLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR----------ADLEEALDFAAEGKIKPEILETIPL 314 (339)
T ss_pred HHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH----------HHHHHHHHHHHhCCceeeEEeeECH
Confidence 999999999999999774 44455777878889999999987653 6689999999999999999 59999
Q ss_pred ccHHHHHHHHhccCCCCCceEeeC
Q 021311 291 NNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 291 ~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++||+.|++++..| ++||++
T Consensus 315 ~~in~A~~~m~~g~v~g-R~Vi~~ 337 (339)
T COG1064 315 DEINEAYERMEKGKVRG-RAVIDM 337 (339)
T ss_pred HHHHHHHHHHHcCCeee-EEEecC
Confidence 99999999999999998 999874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.7e-53 Score=365.90 Aligned_cols=303 Identities=29% Similarity=0.384 Sum_probs=265.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-C-CCCc
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-P-SSGT 78 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~-~~g~ 78 (314)
++|+|.|+|+++||+|||.++++|+.|.....|..+....+|+++|.|++|+|+++|++|+.|++||+|+.+. . ..|+
T Consensus 17 ~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~ 96 (326)
T COG0604 17 VVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGG 96 (326)
T ss_pred EEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCc
Confidence 3688999999999999999999999999999997433336899999999999999999999999999999994 2 1699
Q ss_pred ccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 79 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 79 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
|+||..+|++.++++|+++|+++||+++++++|||+++....++++|++|||+||+|++|.+++|+|+.+|+++++++.
T Consensus 97 ~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~- 175 (326)
T COG0604 97 YAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS- 175 (326)
T ss_pred ceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEec-
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999987777773
Q ss_pred CCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC-CCCccc
Q 021311 159 RAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS-KKPITV 236 (314)
Q Consensus 159 ~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 236 (314)
++++.++++++|++++++|++. +.+++++++++++ +|+|||++|++.+..++++|+++|+++.+|..+ .....+
T Consensus 176 ---s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~g-vDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~ 251 (326)
T COG0604 176 ---SSEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPL 251 (326)
T ss_pred ---CHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCC-ceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCCcccc
Confidence 6777779999999999999887 5588999999987 999999999999999999999999999999877 445556
Q ss_pred ccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce-eeccccHH--HHHHHHhccCCCCCceEee
Q 021311 237 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQ--TALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~--~a~~~~~~~~~~~~k~vi~ 313 (314)
+...++.+.++..+...... +++..++.++++.+++++|++++.++ .||+++.. .++..+. ++..| |+|++
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~-~~~~G-Kvvl~ 325 (326)
T COG0604 252 NLLPLLGKRLTLRGVTLGSR----DPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLE-RRTTG-KVVLK 325 (326)
T ss_pred CHHHHhhccEEEEEecceec----chHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcc-cCCcc-eEEEe
Confidence 66667778888888765432 23666788899999999999999976 79999954 4444444 47777 99997
Q ss_pred C
Q 021311 314 F 314 (314)
Q Consensus 314 ~ 314 (314)
+
T Consensus 326 ~ 326 (326)
T COG0604 326 V 326 (326)
T ss_pred C
Confidence 5
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-51 Score=334.58 Aligned_cols=295 Identities=22% Similarity=0.247 Sum_probs=258.1
Q ss_pred CccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCC--CCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC--
Q 021311 1 MIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS-- 75 (314)
Q Consensus 1 i~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~--~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~-- 75 (314)
|++.|+|++ .|+||+|++.++|||++|.|.+.......+ +.|+++|||.+|+|+++|++|+++++||||+.-+..
T Consensus 18 i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c 97 (354)
T KOG0024|consen 18 IEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPC 97 (354)
T ss_pred EeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCcc
Confidence 467888986 999999999999999999999987654432 579999999999999999999999999999876531
Q ss_pred -------------------------CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEE
Q 021311 76 -------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 130 (314)
Q Consensus 76 -------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 130 (314)
+|++++|++.+++.+++||++++++++|++. +++.+||+.++ +++++|++|||
T Consensus 98 ~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAcr~-~~vk~Gs~vLV 175 (354)
T KOG0024|consen 98 RDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHACRR-AGVKKGSKVLV 175 (354)
T ss_pred ccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhhhh-cCcccCCeEEE
Confidence 8999999999999999999999999999988 79999999977 99999999999
Q ss_pred cCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-H----HHHHHHhcCCCCCcEEEecC
Q 021311 131 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-V----KNVKGLLANLPEPALGFNCV 205 (314)
Q Consensus 131 ~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~----~~i~~~~~~~g~~d~v~d~~ 205 (314)
+|| |++|+++...|+.+|+..+++++. .+.|++.++++|++.+.+..... . +.+++..+... +|+.|||+
T Consensus 176 ~GA-GPIGl~t~l~Aka~GA~~VVi~d~---~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~-~d~~~dCs 250 (354)
T KOG0024|consen 176 LGA-GPIGLLTGLVAKAMGASDVVITDL---VANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQ-PDVTFDCS 250 (354)
T ss_pred ECC-cHHHHHHHHHHHHcCCCcEEEeec---CHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccC-CCeEEEcc
Confidence 999 999999999999999999988886 89999999999999988765432 2 33444444343 99999999
Q ss_pred CCccH-HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc
Q 021311 206 GGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 284 (314)
Q Consensus 206 g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 284 (314)
|.+.. +.++..++.+|++++.| +.....+++...+..+++++.|+..+.. .++..+++++.+|++.+.
T Consensus 251 G~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry~~----------~~y~~ai~li~sGki~~k 319 (354)
T KOG0024|consen 251 GAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRYCN----------GDYPTAIELVSSGKIDVK 319 (354)
T ss_pred CchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeeecc----------ccHHHHHHHHHcCCcCch
Confidence 99765 88999999999988887 5566788899999999999999876543 467899999999999865
Q ss_pred ---ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 285 ---MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 285 ---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
++.|+++++.+||+.+.+++....|++|.
T Consensus 320 ~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 320 PLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred hheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 68999999999999999999877899986
No 4
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2e-50 Score=316.32 Aligned_cols=303 Identities=23% Similarity=0.293 Sum_probs=273.8
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCccc
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 80 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~ 80 (314)
+++.|.|+|+|+|+.||-.|+|+|..|..+..|.+. .+++|++||.|.+|+|+.+|++|+++++||+|+.+.+ .|.|+
T Consensus 25 ~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~-~g~ya 102 (336)
T KOG1197|consen 25 LEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP-FGAYA 102 (336)
T ss_pred EeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCccccccccEEEEecc-chhhh
Confidence 367899999999999999999999999999999985 3478999999999999999999999999999999885 79999
Q ss_pred ceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 81 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 81 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
++..+|...++++|+.+++..||++.+.++|||..+++.-+++||++||++.|+|++|+++.|+++..|+++|.++
T Consensus 103 ee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~a---- 178 (336)
T KOG1197|consen 103 EEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATA---- 178 (336)
T ss_pred eeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEe----
Confidence 9999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccc
Q 021311 161 GSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTS 239 (314)
Q Consensus 161 ~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 239 (314)
++.++++.+++.|++|.++++.++ .+++.++++++| +|+++|++|.+.+...+.+|++.|.+|.+|+.++...+++..
T Consensus 179 sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~ 257 (336)
T KOG1197|consen 179 STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLN 257 (336)
T ss_pred ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehh
Confidence 478999999999999999998765 588999999988 999999999999999999999999999999877765555555
Q ss_pred cceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHhccCCCCCceEee
Q 021311 240 AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.+..+.+++....+..+. ..+..+.....+++.++.+|.+++.++ .|||+++.+|+.++++++..| |+++-
T Consensus 258 ~ls~k~l~lvrpsl~gYi--~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvG-kvlLl 329 (336)
T KOG1197|consen 258 QLSPKALQLVRPSLLGYI--DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVG-KVLLL 329 (336)
T ss_pred hcChhhhhhccHhhhccc--CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccc-eEEEe
Confidence 565666766555443332 346677788999999999999999985 799999999999999999999 99874
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-49 Score=322.41 Aligned_cols=292 Identities=26% Similarity=0.301 Sum_probs=256.7
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
.+++.|+|+++||+|+++|+|||++|++.+.+.++. ..+|.++|||.+|+|+++|++|++|++||+|-+=..
T Consensus 27 ~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~C 105 (360)
T KOG0023|consen 27 FSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSC 105 (360)
T ss_pred eEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCc
Confidence 567899999999999999999999999999999988 689999999999999999999999999999954210
Q ss_pred ---------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCE
Q 021311 75 ---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS 127 (314)
Q Consensus 75 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 127 (314)
++|+|++|+++++..++++|++++++.||.+.++..|+|.++.+ .++.||++
T Consensus 106 E~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~-~g~~pG~~ 184 (360)
T KOG0023|consen 106 EYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKR-SGLGPGKW 184 (360)
T ss_pred cccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHH-cCCCCCcE
Confidence 06779999999999999999999999999999999999999987 88999999
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC-hh-hHHHHHHHhcCCCCCcEEEecC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QL-EVKNVKGLLANLPEPALGFNCV 205 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~-~~-~~~~i~~~~~~~g~~d~v~d~~ 205 (314)
+-|.|+ |++|.+++|+|+++|.+|+++.+. +..+.+.++.||++..++.. +. ..+.+++.+++ .+|-+.+.
T Consensus 185 vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~---~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg--~~~~v~~~- 257 (360)
T KOG0023|consen 185 VGIVGL-GGLGHMAVQYAKAMGMRVTVISTS---SKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDG--GIDTVSNL- 257 (360)
T ss_pred EEEecC-cccchHHHHHHHHhCcEEEEEeCC---chhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcC--cceeeeec-
Confidence 999999 559999999999999999999863 44666777889999988876 33 44677776665 46766665
Q ss_pred CCccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc
Q 021311 206 GGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM 285 (314)
Q Consensus 206 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 285 (314)
....+..++.+|+++|++|++|.+.. +..++...+..+.+++.|+..+.. ...++++++..++.+++++
T Consensus 258 a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~----------ket~E~Ldf~a~~~ik~~I 326 (360)
T KOG0023|consen 258 AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSR----------KETQEALDFVARGLIKSPI 326 (360)
T ss_pred cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccH----------HHHHHHHHHHHcCCCcCce
Confidence 44556899999999999999996655 888888888889999999987653 5678999999999999999
Q ss_pred eeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 286 ELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
...+++++++||++|++++... +.|+++
T Consensus 327 E~v~~~~v~~a~erm~kgdV~y-RfVvD~ 354 (360)
T KOG0023|consen 327 ELVKLSEVNEAYERMEKGDVRY-RFVVDV 354 (360)
T ss_pred EEEehhHHHHHHHHHHhcCeeE-EEEEEc
Confidence 9999999999999999999988 988874
No 6
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.9e-48 Score=308.78 Aligned_cols=313 Identities=54% Similarity=0.861 Sum_probs=280.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCccc
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 80 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~ 80 (314)
+++++.|+.+.++|+||..++.|||+|+..+.|.||.+|.+|.+-|+|++|.|+.+|+.+.+|++||+|+....+.|+|+
T Consensus 37 l~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~ 116 (354)
T KOG0025|consen 37 LKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWR 116 (354)
T ss_pred eecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCCCccce
Confidence 35778899888889999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 81 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 81 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
+|.+.+++.++++++.++++.||++.++++|||.+|...-++.+|++|+-.||++++|++.+|+|+++|.+-+.++|.+.
T Consensus 117 t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~ 196 (354)
T KOG0025|consen 117 TEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRP 196 (354)
T ss_pred eeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccccc
Q 021311 161 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSA 240 (314)
Q Consensus 161 ~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 240 (314)
..++-.+.++++||++++...+..-...+..-...+++.+.|||+|+.......+.|..||.++.+|+++..+.+.+...
T Consensus 197 ~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~ 276 (354)
T KOG0025|consen 197 NIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTVPTSL 276 (354)
T ss_pred cHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCcccccch
Confidence 78888889999999999976553322333332333359999999999999999999999999999999999999999999
Q ss_pred ceecceEEEEEechhhcccc-CHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHhccCCCCCceEee
Q 021311 241 FIFKDLSLKGFWLQKWLSSE-KATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+..+++++.|+|+..|.... .++...+.++++.+++..|+++.+. ...+|++.+.|++..........|-+|.
T Consensus 277 lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 277 LIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred heeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEE
Confidence 99999999999999997643 3777889999999999999999875 5799999999998887765543365554
No 7
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1e-48 Score=321.06 Aligned_cols=296 Identities=26% Similarity=0.332 Sum_probs=265.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC-----
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS----- 75 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~----- 75 (314)
|+|++.++|+++||+||+.++|+|++|....+|..|. .+|.++|||.+|+|+++|++|++++|||+|+..+..
T Consensus 17 i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C 94 (366)
T COG1062 17 IEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQC 94 (366)
T ss_pred EEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCC
Confidence 5789999999999999999999999999999999887 399999999999999999999999999999987641
Q ss_pred ------------------------------------------CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHH
Q 021311 76 ------------------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113 (314)
Q Consensus 76 ------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 113 (314)
.++|++|.++++.+++++++..+++.++++.+...|.+
T Consensus 95 ~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~ 174 (366)
T COG1062 95 KFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGI 174 (366)
T ss_pred chhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccCh
Confidence 45999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh--hHHHHHHH
Q 021311 114 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGL 191 (314)
Q Consensus 114 ~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~i~~~ 191 (314)
.+..+.+++++|+++.|.|. |++|++++|-|+..|+..|+.++. .+++++++++||+++++|..+. -.+.+.++
T Consensus 175 Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~---~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~ 250 (366)
T COG1062 175 GAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDI---NPEKLELAKKFGATHFVNPKEVDDVVEAIVEL 250 (366)
T ss_pred HHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeC---CHHHHHHHHhcCCceeecchhhhhHHHHHHHh
Confidence 99999999999999999999 999999999999999999988886 8999999999999999999876 34678888
Q ss_pred hcCCCCCcEEEecCCCcc-HHHHHHhcccCCEEEEEcCCC-CCCcccccccceecceEEEEEechhhccccCHHHHHHHH
Q 021311 192 LANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMI 269 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (314)
|++ ++|.+|||+|+.. +..++++..++|+.+.+|... +..++.++..++.. .++.|++++.... +.++
T Consensus 251 T~g--G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p-------~~di 320 (366)
T COG1062 251 TDG--GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARP-------RSDI 320 (366)
T ss_pred cCC--CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcc-------ccch
Confidence 887 5999999999955 589999999999999999654 44567777777766 9999998875422 3668
Q ss_pred HHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 270 DYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 270 ~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
..++++..+|++.+. ++.++|+|++|||+.|.+++.. |.||+|
T Consensus 321 P~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I--R~Vi~~ 366 (366)
T COG1062 321 PRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI--RSVIRF 366 (366)
T ss_pred hHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee--eEEecC
Confidence 899999999999975 6799999999999999998875 777764
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.3e-46 Score=330.99 Aligned_cols=294 Identities=23% Similarity=0.304 Sum_probs=250.5
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
+++|.|+|+++||+|||.+++||++|++.+.|.++. .+|.++|||++|+|+++|++++++++||+|++...
T Consensus 24 ~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~ 101 (371)
T cd08281 24 EEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCR 101 (371)
T ss_pred EEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCc
Confidence 578889999999999999999999999999887643 46899999999999999999999999999987321
Q ss_pred ----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHH
Q 021311 75 ----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 114 (314)
Q Consensus 75 ----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 114 (314)
..|+|+||++++++.++++|+++++++++.++++++|||+
T Consensus 102 ~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~ 181 (371)
T cd08281 102 PCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVG 181 (371)
T ss_pred cccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHH
Confidence 0268999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHh
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLL 192 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~ 192 (314)
++.+.+++++|++|||.|+ |++|++++|+|+..|++ ++++. .++++++.++++|+++++++.+. ..+.+++++
T Consensus 182 ~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~----~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~ 256 (371)
T cd08281 182 AVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD----LNEDKLALARELGATATVNAGDPNAVEQVRELT 256 (371)
T ss_pred HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHHHcCCceEeCCCchhHHHHHHHHh
Confidence 9887789999999999997 99999999999999995 66555 37888999999999999988764 346788777
Q ss_pred cCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHHHHHH
Q 021311 193 ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 270 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (314)
++ + +|++|||+|.. .+..++++++++|+++.+|.... ...+++...++.+++++.|++...+. .++.++
T Consensus 257 ~~-g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-------~~~~~~ 327 (371)
T cd08281 257 GG-G-VDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCV-------PRRDIP 327 (371)
T ss_pred CC-C-CCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCC-------hHHHHH
Confidence 76 4 99999999975 55889999999999999996543 23456666778899999998765442 124577
Q ss_pred HHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 271 YLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 271 ~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.+++++++|++++. ++.|+|+|+++||+.+.+++..+ |+|+
T Consensus 328 ~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~-~vi~ 371 (371)
T cd08281 328 RYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVR-QVIL 371 (371)
T ss_pred HHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcee-eeeC
Confidence 88999999999863 57899999999999999988776 6653
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=4.3e-46 Score=325.98 Aligned_cols=294 Identities=22% Similarity=0.252 Sum_probs=247.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
+++++.|+|+++||+||+.++++|++|++.+.+.+......|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c 93 (339)
T cd08239 14 LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGAC 93 (339)
T ss_pred EEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCC
Confidence 35788999999999999999999999999887764322235889999999999999999999999999987541
Q ss_pred ---------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 75 ---------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
..|+|++|++++.+.++++|+++++++++++++++.|||+++.+ +++++|++|||+|+
T Consensus 94 ~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~G~ 172 (339)
T cd08239 94 RNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRR-VGVSGRDTVLVVGA 172 (339)
T ss_pred hhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh-cCCCCCCEEEEECC
Confidence 15899999999999999999999999999999999999999965 78999999999987
Q ss_pred CcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccH-H
Q 021311 134 TSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-S 211 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~-~ 211 (314)
|++|++++|+|+.+|++ ++++. .++++++.++++|+++++++++...+++++.+++.+ +|++|||+|+... .
T Consensus 173 -G~vG~~~~~~ak~~G~~~vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~-~d~vid~~g~~~~~~ 246 (339)
T cd08239 173 -GPVGLGALMLARALGAEDVIGVD----PSPERLELAKALGADFVINSGQDDVQEIRELTSGAG-ADVAIECSGNTAARR 246 (339)
T ss_pred -CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCC-CCEEEECCCCHHHHH
Confidence 99999999999999999 66655 267888999999999999887644566777777665 9999999998765 7
Q ss_pred HHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceee
Q 021311 212 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELV 288 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~ 288 (314)
.++++++++|+++.+|........ ....++.+++++.|++... .+.++++++++.+|++.+. ++.|
T Consensus 247 ~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~~~~~g~i~~~~~i~~~~ 315 (339)
T cd08239 247 LALEAVRPWGRLVLVGEGGELTIE-VSNDLIRKQRTLIGSWYFS----------VPDMEECAEFLARHKLEVDRLVTHRF 315 (339)
T ss_pred HHHHHhhcCCEEEEEcCCCCcccC-cHHHHHhCCCEEEEEecCC----------HHHHHHHHHHHHcCCCChhHeEEEEe
Confidence 889999999999999965432221 1245667899999986532 1457889999999998753 5689
Q ss_pred ccccHHHHHHHHhccCCCCCceEeeC
Q 021311 289 PFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 289 ~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++++||+.+.+++ .| |+||+|
T Consensus 316 ~l~~~~~a~~~~~~~~-~g-Kvvi~~ 339 (339)
T cd08239 316 GLDQAPEAYALFAQGE-SG-KVVFVF 339 (339)
T ss_pred cHHHHHHHHHHHHcCC-ce-EEEEeC
Confidence 9999999999998865 56 999986
No 10
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.4e-46 Score=326.72 Aligned_cols=291 Identities=20% Similarity=0.308 Sum_probs=243.1
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
.+++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|++||+|+....
T Consensus 28 ~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C 106 (360)
T PLN02586 28 FHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSC 106 (360)
T ss_pred EeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCC
Confidence 467788899999999999999999999998886543 257899999999999999999999999999974210
Q ss_pred ---------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCE
Q 021311 75 ---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS 127 (314)
Q Consensus 75 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 127 (314)
.+|+|+||++++++.++++|+++++++++.+++.+.|+|+++.+...+++|++
T Consensus 107 ~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~ 186 (360)
T PLN02586 107 ESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKH 186 (360)
T ss_pred ccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCE
Confidence 14899999999999999999999999999999999999999987667889999
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|||.|+ |++|++++|+|+.+|++++++... .+++.+.++++|+++++++.+. +.+++.++ ++|++||++|.
T Consensus 187 VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~---~~~~~~~~~~~Ga~~vi~~~~~--~~~~~~~~---~~D~vid~~g~ 257 (360)
T PLN02586 187 LGVAGL-GGLGHVAVKIGKAFGLKVTVISSS---SNKEDEAINRLGADSFLVSTDP--EKMKAAIG---TMDYIIDTVSA 257 (360)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---cchhhhHHHhCCCcEEEcCCCH--HHHHhhcC---CCCEEEECCCC
Confidence 999887 999999999999999998877643 3344456678999999987653 34555543 39999999997
Q ss_pred c-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce
Q 021311 208 N-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 286 (314)
Q Consensus 208 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 286 (314)
. .+..++++++++|+++.+|... .+..+++..++.++..+.+++.+.. ..++++++++++|++++.++
T Consensus 258 ~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~li~~g~i~~~~~ 326 (360)
T PLN02586 258 VHALGPLLGLLKVNGKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIGGI----------KETQEMLDFCAKHNITADIE 326 (360)
T ss_pred HHHHHHHHHHhcCCcEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcCCH----------HHHHHHHHHHHhCCCCCcEE
Confidence 5 4688999999999999999543 3445566666778888887754321 45788999999999998878
Q ss_pred eeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 287 LVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 287 ~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.|+|+|+++||+.+.+++..| |+|+++
T Consensus 327 ~~~l~~~~~A~~~~~~~~~~g-kvvi~~ 353 (360)
T PLN02586 327 LIRMDEINTAMERLAKSDVRY-RFVIDV 353 (360)
T ss_pred EEeHHHHHHHHHHHHcCCCcE-EEEEEc
Confidence 899999999999999998777 999874
No 11
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.6e-46 Score=326.33 Aligned_cols=291 Identities=21% Similarity=0.325 Sum_probs=244.6
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------- 73 (314)
.+++.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|...+
T Consensus 22 ~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C 100 (375)
T PLN02178 22 FHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSC 100 (375)
T ss_pred EeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCC
Confidence 356788899999999999999999999999887642 25689999999999999999999999999997421
Q ss_pred --------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhc-CCCCC
Q 021311 74 --------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT-LNSGD 126 (314)
Q Consensus 74 --------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~ 126 (314)
...|+|+||++++++.++++|+++++++++.+++...|+|+++..... .++|+
T Consensus 101 ~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~ 180 (375)
T PLN02178 101 ESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK 180 (375)
T ss_pred hhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCC
Confidence 014899999999999999999999999999999999999999876433 36899
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|+|.|+ |++|++++|+|+.+|++++++... .+++.+.++++|+++++++.+. +.+++.++ ++|++|||+|
T Consensus 181 ~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~---~~~~~~~a~~lGa~~~i~~~~~--~~v~~~~~---~~D~vid~~G 251 (375)
T PLN02178 181 RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS---SEKEREAIDRLGADSFLVTTDS--QKMKEAVG---TMDFIIDTVS 251 (375)
T ss_pred EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC---hHHhHHHHHhCCCcEEEcCcCH--HHHHHhhC---CCcEEEECCC
Confidence 9999997 999999999999999998877642 3445677889999999987653 35555553 3999999999
Q ss_pred Cc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc
Q 021311 207 GN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM 285 (314)
Q Consensus 207 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 285 (314)
.+ .+..++++++++|+++.+|... .+..++...++.+++++.|++.... +.++++++++++|++++.+
T Consensus 252 ~~~~~~~~~~~l~~~G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~i~~~i 320 (375)
T PLN02178 252 AEHALLPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGGM----------KETQEMLEFCAKHKIVSDI 320 (375)
T ss_pred cHHHHHHHHHhhcCCCEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccCH----------HHHHHHHHHHHhCCCcccE
Confidence 87 4589999999999999999653 3445666677779999998765331 4578899999999999888
Q ss_pred eeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 286 ELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+.|+|+|+++||+.+.+++..| |+|+++
T Consensus 321 ~~~~l~~~~~A~~~~~~~~~~g-kvvi~~ 348 (375)
T PLN02178 321 ELIKMSDINSAMDRLAKSDVRY-RFVIDV 348 (375)
T ss_pred EEEeHHHHHHHHHHHHcCCCce-EEEEEe
Confidence 8899999999999999998877 999874
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.9e-45 Score=322.61 Aligned_cols=296 Identities=21% Similarity=0.246 Sum_probs=249.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|+|+++||+|||.++|+|++|++.+.|..+. .+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 16 ~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c 93 (358)
T TIGR03451 16 LETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQC 93 (358)
T ss_pred EEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCC
Confidence 3678899999999999999999999999999886543 46899999999999999999999999999986210
Q ss_pred ---------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhc
Q 021311 75 ---------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 121 (314)
Q Consensus 75 ---------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~ 121 (314)
..|+|+||++++++.++++|+++++++++.+++.+.+||+++.+.++
T Consensus 94 ~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~ 173 (358)
T TIGR03451 94 RACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGG 173 (358)
T ss_pred hHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccC
Confidence 14899999999999999999999999999999999999999888789
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCc
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPA 199 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d 199 (314)
+++|++|||+|+ |++|++++|+|+..|++ ++++. .++++++.++++|+++++++.+. ..+.+++.+++.+ +|
T Consensus 174 ~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g-~d 247 (358)
T TIGR03451 174 VKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVD----IDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFG-AD 247 (358)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCC-CC
Confidence 999999999987 99999999999999997 55554 27888999999999999988764 3466888887766 99
Q ss_pred EEEecCCCc-cHHHHHHhcccCCEEEEEcCCCCC-CcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHH
Q 021311 200 LGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 277 (314)
Q Consensus 200 ~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 277 (314)
++|||+|++ .+..++++++++|+++.+|..... ..++++..++.+++++.+++..... .++.++.++++++
T Consensus 248 ~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~l~~ 320 (358)
T TIGR03451 248 VVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL-------PERDFPMLVDLYL 320 (358)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC-------cHHHHHHHHHHHH
Confidence 999999974 568899999999999999965432 3455666677788999987653221 1355788999999
Q ss_pred cCCcccc---ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 278 EGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 278 ~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+|++++. ++.|+++|+++||+.+++++.. |+++.
T Consensus 321 ~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~--k~~~~ 357 (358)
T TIGR03451 321 QGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL--RSVVE 357 (358)
T ss_pred cCCCCchheEEEEecHHHHHHHHHHHhCCCcc--eeEEe
Confidence 9999863 5689999999999999887653 77765
No 13
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.1e-44 Score=315.15 Aligned_cols=299 Identities=30% Similarity=0.453 Sum_probs=250.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCC-CCCCCEEeeCCCCCCccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR-LAPGDWVIPSPPSSGTWQ 80 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~-~~~Gd~V~~~~~~~g~~~ 80 (314)
+++|.|+|+++||+||+.++++|++|++...|.++..+.+|.++|||++|+|+++|+++.+ |++||+|++....+|+|+
T Consensus 21 ~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a 100 (324)
T cd08291 21 PEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYA 100 (324)
T ss_pred cccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCCCCcch
Confidence 5778899999999999999999999999998876544467899999999999999999996 999999998753238999
Q ss_pred ceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEc-CCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 81 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 81 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
+|++++++.++++|++++++++++++..++|||..+ ..++. ++++++|+ +++|++|++++|+|+.+|++++++++
T Consensus 101 ~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~-- 176 (324)
T cd08291 101 EYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVR-- 176 (324)
T ss_pred heeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeC--
Confidence 999999999999999999999998888999998655 44555 45566665 77899999999999999999888774
Q ss_pred CCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCc-ccc
Q 021311 160 AGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVS 237 (314)
Q Consensus 160 ~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~ 237 (314)
++++++.++++|+++++++++. ..+.+++.+.+.+ +|++|||+|+......+++++++|+++.+|....... .++
T Consensus 177 --~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~-~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 253 (324)
T cd08291 177 --RKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLN-ATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPID 253 (324)
T ss_pred --CHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCCcccCC
Confidence 6788899999999999998764 4467888887766 9999999999888888999999999999996544433 244
Q ss_pred cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHhccCCCCCceEee
Q 021311 238 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
....+.+++++.+++...+... ...+.++.++++++ +.+++.+ ++|+|+|+++||+.+.+++..| |+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~G-kvv~~ 324 (324)
T cd08291 254 PVDLIFKNKSIEGFWLTTWLQK----LGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTG-KKLLI 324 (324)
T ss_pred HHHHhhcCcEEEEEEHHHhhcc----cCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCC-eEEeC
Confidence 5556778999999887665321 12456788888887 8888765 5899999999999999998888 99874
No 14
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.8e-45 Score=322.45 Aligned_cols=296 Identities=20% Similarity=0.288 Sum_probs=246.8
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
+|++.|+|+++||+|||.++|+|++|++.+.|.++....+|.++|||++|+|+++|+++++|++||+|++...
T Consensus 26 ~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~ 105 (381)
T PLN02740 26 EEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCR 105 (381)
T ss_pred EEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCCh
Confidence 5788899999999999999999999999998876544467999999999999999999999999999987531
Q ss_pred -------------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHH
Q 021311 75 -------------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT 111 (314)
Q Consensus 75 -------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t 111 (314)
..|+|+||++++.+.++++|+++++++++.+++++.|
T Consensus 106 ~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t 185 (381)
T PLN02740 106 YCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVST 185 (381)
T ss_pred hhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchh
Confidence 1489999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHH
Q 021311 112 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKN 187 (314)
Q Consensus 112 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~ 187 (314)
||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++ ++++.. ++++++.++++|+++++++.+. ..+.
T Consensus 186 a~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~----~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~ 260 (381)
T PLN02740 186 GVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDI----NPEKFEKGKEMGITDFINPKDSDKPVHER 260 (381)
T ss_pred hHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcC----ChHHHHHHHHcCCcEEEecccccchHHHH
Confidence 9999888789999999999997 99999999999999995 665552 7888999999999999987653 3466
Q ss_pred HHHHhcCCCCCcEEEecCCCc-cHHHHHHhcccC-CEEEEEcCCCCC-CcccccccceecceEEEEEechhhccccCHHH
Q 021311 188 VKGLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATE 264 (314)
Q Consensus 188 i~~~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (314)
+++++++ + +|++|||+|.+ ....++.+++++ |+++.+|..... ...+.+..+ .+++++.|++.+.+.
T Consensus 261 v~~~~~~-g-~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~------- 330 (381)
T PLN02740 261 IREMTGG-G-VDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSVFGDFK------- 330 (381)
T ss_pred HHHHhCC-C-CCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEecCCCC-------
Confidence 7777776 4 99999999985 458899999996 999999965432 123333323 368899988765431
Q ss_pred HHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 265 CRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 265 ~~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
....+.++++++.+|.+++. ++.|+|+|+++||+.+.+++. .|++|+.
T Consensus 331 ~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~--~k~~~~~ 381 (381)
T PLN02740 331 GKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA--LRCLLHL 381 (381)
T ss_pred cHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc--eeEEEeC
Confidence 12457889999999998763 578999999999999988764 3999864
No 15
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1e-44 Score=319.87 Aligned_cols=295 Identities=20% Similarity=0.277 Sum_probs=242.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
+++|.|+|+++||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 17 ~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~ 95 (368)
T TIGR02818 17 EEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECK 95 (368)
T ss_pred EEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCCh
Confidence 578899999999999999999999999999887653 257899999999999999999999999999987531
Q ss_pred ----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHH
Q 021311 75 ----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 114 (314)
Q Consensus 75 ----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 114 (314)
..|+|+||++++++.++++|+++++++++++++++.|||+
T Consensus 96 ~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~ 175 (368)
T TIGR02818 96 FCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIG 175 (368)
T ss_pred hhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHH
Confidence 0268999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecCh--h-hHHHHHH
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--L-EVKNVKG 190 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~--~-~~~~i~~ 190 (314)
++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++. .++++++.++++|+++++++.+ . ..+.+++
T Consensus 176 a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~----~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~ 250 (368)
T TIGR02818 176 AVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID----INPAKFELAKKLGATDCVNPNDYDKPIQEVIVE 250 (368)
T ss_pred HHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCeEEcccccchhHHHHHHH
Confidence 9987789999999999987 9999999999999999 566655 3788899999999999998764 2 3356777
Q ss_pred HhcCCCCCcEEEecCCCc-cHHHHHHhcccC-CEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHHH
Q 021311 191 LLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 267 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
++++ + +|++|||+|.+ ....++++++++ |+++.+|.... .+.++....++. +..+.++..... ..+.
T Consensus 251 ~~~~-g-~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~-------~~~~ 320 (368)
T TIGR02818 251 ITDG-G-VDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGV-------KGRT 320 (368)
T ss_pred HhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCC-------CcHH
Confidence 7776 4 99999999975 458899999886 99999996542 233333443433 345666543321 1124
Q ss_pred HHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 268 MIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++++++++++|++++. ++.|+|+|+++||+.+.+++. . |++|+|
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~-k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-I-RTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-e-eEEeeC
Confidence 57889999999998753 678999999999999988654 3 999875
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-45 Score=318.60 Aligned_cols=288 Identities=19% Similarity=0.203 Sum_probs=234.8
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhc-cCCCC-CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-----
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP----- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~-~~~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~----- 73 (314)
+++++.| ++++||+|||.++|||++|++++. +..+. ...+|.++|||++|+|+++ ++++|++||+|+..+
T Consensus 18 ~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg 94 (343)
T PRK09880 18 VTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCG 94 (343)
T ss_pred EEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCc
Confidence 3567776 689999999999999999999875 43322 2257899999999999999 788999999998632
Q ss_pred --------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCE
Q 021311 74 --------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS 127 (314)
Q Consensus 74 --------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 127 (314)
..+|+|+||++++++.++++|+++++++++. ..++.+||+++.+ ....++++
T Consensus 95 ~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~al~~-~~~~~g~~ 172 (343)
T PRK09880 95 HCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAVAIHAAHQ-AGDLQGKR 172 (343)
T ss_pred CChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHHHHHHHHHh-cCCCCCCE
Confidence 1259999999999999999999999987664 4478899999976 56678999
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
|+|+|+ |++|++++|+|+.+|++ ++++. .++++++.++++|+++++++++....++... .+++|++|||+|
T Consensus 173 VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~---~g~~D~vid~~G 244 (343)
T PRK09880 173 VFVSGV-GPIGCLIVAAVKTLGAAEIVCAD----VSPRSLSLAREMGADKLVNPQNDDLDHYKAE---KGYFDVSFEVSG 244 (343)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCcEEEEEe----CCHHHHHHHHHcCCcEEecCCcccHHHHhcc---CCCCCEEEECCC
Confidence 999997 99999999999999996 44454 2788999999999999999877554443322 224999999999
Q ss_pred Cc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-
Q 021311 207 GN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD- 284 (314)
Q Consensus 207 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~- 284 (314)
.+ .+..++++++++|+++.+|... ...+++...++.+++++.+++.. .+.++.+++++++|++++.
T Consensus 245 ~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~-----------~~~~~~~~~l~~~g~i~~~~ 312 (343)
T PRK09880 245 HPSSINTCLEVTRAKGVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF-----------TEEFNTAVSWLANGVINPLP 312 (343)
T ss_pred CHHHHHHHHHHhhcCCEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec-----------cccHHHHHHHHHcCCCCchh
Confidence 85 4689999999999999999543 33455666677899999987531 1457889999999999863
Q ss_pred --ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 285 --MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 285 --~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++.|+++|+++||+.+.+++..+ |+++++
T Consensus 313 ~i~~~~~l~~~~~A~~~~~~~~~~g-Kvvl~~ 343 (343)
T PRK09880 313 LLSAEYPFTDLEEALIFAGDKTQAA-KVQLVF 343 (343)
T ss_pred heEEEEEHHHHHHHHHHHhcCCCce-EEEEeC
Confidence 47899999999999999987766 999975
No 17
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.2e-44 Score=320.02 Aligned_cols=294 Identities=22% Similarity=0.277 Sum_probs=246.4
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++|+|.|+|+++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|+++++|++||+|++...
T Consensus 27 ~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C 102 (378)
T PLN02827 27 MEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSC 102 (378)
T ss_pred EEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCC
Confidence 35789999999999999999999999999887642 35789999999999999999999999999998632
Q ss_pred -----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHH
Q 021311 75 -----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113 (314)
Q Consensus 75 -----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 113 (314)
..|+|+||+.++++.++++|+++++++++.+++++.++|
T Consensus 103 ~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~ 182 (378)
T PLN02827 103 RHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGL 182 (378)
T ss_pred hhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhH
Confidence 027999999999999999999999999999988889999
Q ss_pred HHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh---hhHHHHHH
Q 021311 114 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ---LEVKNVKG 190 (314)
Q Consensus 114 ~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~i~~ 190 (314)
+++.+.+++++|++|||+|+ |++|++++|+|+.+|++.+++++. ++++.+.++++|+++++++++ ...+.+++
T Consensus 183 ~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~---~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~ 258 (378)
T PLN02827 183 GAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDI---NPEKAEKAKTFGVTDFINPNDLSEPIQQVIKR 258 (378)
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCcEEEcccccchHHHHHHHH
Confidence 98877788999999999997 999999999999999976555543 678889999999999998765 23456777
Q ss_pred HhcCCCCCcEEEecCCCc-cHHHHHHhcccC-CEEEEEcCCCCCCccccc-ccceecceEEEEEechhhccccCHHHHHH
Q 021311 191 LLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRN 267 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
++++ + +|++|||+|.. .+..+++.++++ |+++.+|..... ..+.. ..++.+++++.|++...+. ...
T Consensus 259 ~~~~-g-~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~-------~~~ 328 (378)
T PLN02827 259 MTGG-G-ADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFGGWK-------PKS 328 (378)
T ss_pred HhCC-C-CCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecCCCc-------hhh
Confidence 7765 4 99999999986 468999999998 999999965432 23333 3466789999998765431 124
Q ss_pred HHHHHHHHHHcCCccc--c-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 268 MIDYLLCLAREGKLKY--D-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++.+++++++|++++ . ++.|+|+++++||+.+.+++. . |+||.|
T Consensus 329 ~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~-k~vi~~ 376 (378)
T PLN02827 329 DLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-L-RCVIHM 376 (378)
T ss_pred hHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-e-EEEEEe
Confidence 5778899999999997 2 568999999999999998876 4 999875
No 18
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.2e-44 Score=314.45 Aligned_cols=284 Identities=18% Similarity=0.173 Sum_probs=239.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
++++|.|+|+++||+|||.++|+|++|.+.+.|.++.. ..|.++|||++|+|+++|+++++|++||+|+..+
T Consensus 17 ~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~ 95 (329)
T TIGR02822 17 FVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGV 95 (329)
T ss_pred EEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCC
Confidence 36789999999999999999999999999998876432 3478999999999999999999999999997521
Q ss_pred --------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 74 --------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 74 --------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
..+|+|+||+.++++.++++|+++++++++.+++++.|||+++.+ +++++|++|||+|+
T Consensus 96 c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~ 174 (329)
T TIGR02822 96 CRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGF 174 (329)
T ss_pred ChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcC
Confidence 014899999999999999999999999999999999999999965 88999999999998
Q ss_pred CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCc-cHHH
Q 021311 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASK 212 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~-~~~~ 212 (314)
|++|++++|+|+..|++++++.+ ++++++.++++|+++++++.+.. .. ++|+++++.+.. .+..
T Consensus 175 -g~iG~~a~~~a~~~G~~vi~~~~----~~~~~~~a~~~Ga~~vi~~~~~~---------~~-~~d~~i~~~~~~~~~~~ 239 (329)
T TIGR02822 175 -GGSAHLTAQVALAQGATVHVMTR----GAAARRLALALGAASAGGAYDTP---------PE-PLDAAILFAPAGGLVPP 239 (329)
T ss_pred -CHHHHHHHHHHHHCCCeEEEEeC----ChHHHHHHHHhCCceeccccccC---------cc-cceEEEECCCcHHHHHH
Confidence 99999999999999999887763 67889999999999998754321 11 389999888764 4589
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeecccc
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNN 292 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 292 (314)
++++++++|+++.+|...+....+++..++.+++++.+++... +..+.++++++++|++++.++.|+|+|
T Consensus 240 ~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~l~~~g~i~~i~~~~~l~~ 309 (329)
T TIGR02822 240 ALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT----------RADAREFLELAAQHGVRVTTHTYPLSE 309 (329)
T ss_pred HHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC----------HHHHHHHHHHHHhCCCeeEEEEEeHHH
Confidence 9999999999999996433333445555667888888875421 234677889999999987778899999
Q ss_pred HHHHHHHHhccCCCCCceEe
Q 021311 293 FQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 293 ~~~a~~~~~~~~~~~~k~vi 312 (314)
+++||+.+.+++..| |+||
T Consensus 310 ~~~A~~~~~~~~~~G-kvvl 328 (329)
T TIGR02822 310 ADRALRDLKAGRFDG-AAVL 328 (329)
T ss_pred HHHHHHHHHcCCCce-EEEe
Confidence 999999999998888 9887
No 19
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-45 Score=296.07 Aligned_cols=297 Identities=23% Similarity=0.291 Sum_probs=260.5
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC-----
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS----- 75 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~----- 75 (314)
|+|+..++|+.+||+||+.++++|++|...++|..+. ..+|.++|||.+|+|+.+|..|+.+++||+|+.++..
T Consensus 22 IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~-~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeC 100 (375)
T KOG0022|consen 22 IEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE-GLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGEC 100 (375)
T ss_pred EEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc-ccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCc
Confidence 5789999999999999999999999999999998643 3789999999999999999999999999999987632
Q ss_pred -------------------------------------------CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHH
Q 021311 76 -------------------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 112 (314)
Q Consensus 76 -------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 112 (314)
..+|+||.+++...++++++..+++.++++.+...|.
T Consensus 101 k~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG 180 (375)
T KOG0022|consen 101 KFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTG 180 (375)
T ss_pred ccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeecccccc
Confidence 4489999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHHHH
Q 021311 113 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVK 189 (314)
Q Consensus 113 ~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~i~ 189 (314)
|.+.-+.++++||+++.|+|- |++|+++++-||..||..|+-+|- .+++.+.++++|+++.+|..+. ..+.++
T Consensus 181 ~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDi---N~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~ 256 (375)
T KOG0022|consen 181 YGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDI---NPDKFEKAKEFGATEFINPKDLKKPIQEVII 256 (375)
T ss_pred chhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEec---CHHHHHHHHhcCcceecChhhccccHHHHHH
Confidence 999999999999999999999 999999999999999988888876 7899999999999999988742 236688
Q ss_pred HHhcCCCCCcEEEecCCCccH-HHHHHhcccC-CEEEEEcCCC-CCCcccccccceecceEEEEEechhhccccCHHHHH
Q 021311 190 GLLANLPEPALGFNCVGGNSA-SKVLKFLSQG-GTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 266 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
+.|++ ++|+-|||.|.... .+++.+.+.+ |+-|.+|... +..+++.+..++ ++.++.|+.++.| ..+
T Consensus 257 EmTdg--GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~-------K~~ 326 (375)
T KOG0022|consen 257 EMTDG--GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGF-------KSK 326 (375)
T ss_pred HHhcC--CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccc-------cch
Confidence 89986 79999999999654 7888888777 9999999654 345677777776 5788888877765 345
Q ss_pred HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 267 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 267 ~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++..+++...++++... +|.+||+++++||+.|.+++.. |.|+.+
T Consensus 327 ~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi--R~vl~~ 375 (375)
T KOG0022|consen 327 SDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI--RCVLWM 375 (375)
T ss_pred hhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE--EEEEeC
Confidence 678888999999999865 7899999999999999998875 777653
No 20
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.5e-43 Score=306.76 Aligned_cols=304 Identities=31% Similarity=0.522 Sum_probs=260.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
+++|.|.+.++||+|||.++++|+.|+..+.|.++..+..|.++|||++|+|+++|++++.+++||+|++... .|+|++
T Consensus 19 ~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~g~~~~ 97 (324)
T cd08292 19 GEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV-HGTWAE 97 (324)
T ss_pred eecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC-CCccee
Confidence 5678889999999999999999999999988876543456889999999999999999999999999999853 489999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|+.++++.++++|+++++++++.++..+.+||+++.. +++++|++|||+|++|.+|++++++|+.+|++++++++
T Consensus 98 ~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~---- 172 (324)
T cd08292 98 YFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR---- 172 (324)
T ss_pred EEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec----
Confidence 9999999999999999999999999999999999855 89999999999999999999999999999999998885
Q ss_pred cHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccccc
Q 021311 162 SDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSA 240 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 240 (314)
++++++.++++|.++++++++. +.+.++.++.+++ +|++|||+|+.....++++++++|+++.+|.......++.+..
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 251 (324)
T cd08292 173 RDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAP-ISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGD 251 (324)
T ss_pred CHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHH
Confidence 5677777788899999888764 3466888888776 9999999999888899999999999999986533334444444
Q ss_pred ceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 241 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.+.+++++.++....+.....+....+.++.+++++.+|.+.+. ++.|+++++.+|++.+.+++..+ |++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvvv~ 324 (324)
T cd08292 252 LIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAG-KVLLR 324 (324)
T ss_pred HhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCc-eEEeC
Confidence 56789999998876553322255566788999999999999855 56799999999999999887776 88874
No 21
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-43 Score=312.13 Aligned_cols=291 Identities=24% Similarity=0.293 Sum_probs=243.2
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
+++++.|+|+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 24 ~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~ 102 (357)
T PLN02514 24 PYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGE 102 (357)
T ss_pred EEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCC
Confidence 3578899999999999999999999999998886543 25689999999999999999999999999997421
Q ss_pred ---------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCC
Q 021311 74 ---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGD 126 (314)
Q Consensus 74 ---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 126 (314)
...|+|+||++++.+.++++|+++++++++.+++++.|||+++.+....++|+
T Consensus 103 C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~ 182 (357)
T PLN02514 103 CSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGL 182 (357)
T ss_pred ChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCC
Confidence 01489999999999999999999999999999999999999998766678999
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV 205 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~ 205 (314)
+++|+|+ |++|++++|+|+.+|++++++++ +++++. .++.+|++.++++.+. +.+++.+. ++|++|||+
T Consensus 183 ~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~----~~~~~~~~~~~~Ga~~~i~~~~~--~~~~~~~~---~~D~vid~~ 252 (357)
T PLN02514 183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISS----SDKKREEALEHLGADDYLVSSDA--AEMQEAAD---SLDYIIDTV 252 (357)
T ss_pred eEEEEcc-cHHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHhcCCcEEecCCCh--HHHHHhcC---CCcEEEECC
Confidence 9999976 99999999999999999888774 444444 4467999988776543 34555443 399999999
Q ss_pred CCc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc
Q 021311 206 GGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD 284 (314)
Q Consensus 206 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 284 (314)
|.. ....++++++++|+++.+|.... ..++....++.+++++.|++.... ..++++++++++|++++.
T Consensus 253 g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~g~l~~~ 321 (357)
T PLN02514 253 PVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSM----------KETEEMLEFCKEKGLTSM 321 (357)
T ss_pred CchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCH----------HHHHHHHHHHHhCCCcCc
Confidence 964 56889999999999999996543 345556667788999999866432 357889999999999887
Q ss_pred ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 285 MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 285 ~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++.|+++|+.+||+.+.+++..+ |+|+++
T Consensus 322 i~~~~l~~~~~A~~~~~~~~~~g-k~v~~~ 350 (357)
T PLN02514 322 IEVVKMDYVNTAFERLEKNDVRY-RFVVDV 350 (357)
T ss_pred EEEEcHHHHHHHHHHHHcCCCce-eEEEEc
Confidence 88899999999999999998777 999864
No 22
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2e-43 Score=308.99 Aligned_cols=294 Identities=22% Similarity=0.279 Sum_probs=242.1
Q ss_pred CCCCC-CCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCc--ceEEEEEEecCCCCCCCCCCEEeeCCCCCCccc
Q 021311 4 LPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY--EGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 80 (314)
Q Consensus 4 ~~~p~-~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~--e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~ 80 (314)
++.|. ++++||||||.++++|+.|+....+... .+..|.++|+ |++|+|..+|+++++|++||+|+++ |+|+
T Consensus 35 ~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~----~~~a 109 (348)
T PLN03154 35 IELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI----TGWE 109 (348)
T ss_pred cCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec----CCcE
Confidence 56663 5899999999999999998765443222 1235789997 8899999999999999999999875 6899
Q ss_pred ceEeeeccc--eEE--cCCCCCHH-HhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEE
Q 021311 81 SYVVKDQSV--WHK--VSKDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 155 (314)
Q Consensus 81 ~~~~~~~~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~ 155 (314)
+|.+++.+. +.+ +|++++++ ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++++++
T Consensus 110 ey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~ 189 (348)
T PLN03154 110 EYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGS 189 (348)
T ss_pred EEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 999999753 544 59999986 6889999999999999888899999999999999999999999999999998877
Q ss_pred ecCCCCcHHHHHHHH-hCCCcEEEecCh--hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 156 IRDRAGSDEAKEKLK-GLGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~-~lg~~~~~~~~~--~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
+. ++++.+.++ ++|+++++++++ ...+.+++.+++ ++|++|||+|+..+..++++++++|+++.+|...+.
T Consensus 190 ~~----~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~--gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~ 263 (348)
T PLN03154 190 AG----SSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE--GIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLN 263 (348)
T ss_pred cC----CHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC--CcEEEEECCCHHHHHHHHHHhccCCEEEEECccccC
Confidence 73 677888887 799999999874 334567776653 499999999998789999999999999999965443
Q ss_pred Ccc-----cccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHhccCCC
Q 021311 233 PIT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALGLHGS 306 (314)
Q Consensus 233 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~ 306 (314)
... .+...++.+++++.|++...+. ....+.++++++++++|++++.++ .|+|+++++||+.+.+++..
T Consensus 264 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~ 338 (348)
T PLN03154 264 SLSASQGIHNLYNLISKRIRMQGFLQSDYL-----HLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNV 338 (348)
T ss_pred CCCCCCCcccHHHHhhccceEEEEEHHHHH-----HHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCC
Confidence 221 2334567789999998765431 223467889999999999998765 79999999999999999988
Q ss_pred CCceEeeC
Q 021311 307 QPKQVIKF 314 (314)
Q Consensus 307 ~~k~vi~~ 314 (314)
| |+|+++
T Consensus 339 G-KvVl~~ 345 (348)
T PLN03154 339 G-KQVIRV 345 (348)
T ss_pred c-eEEEEe
Confidence 8 999874
No 23
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.2e-43 Score=313.63 Aligned_cols=294 Identities=20% Similarity=0.299 Sum_probs=245.6
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|+|+++||+|||.++++|++|++.+.|..+. +.+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 17 l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c 95 (369)
T cd08301 17 IEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKEC 95 (369)
T ss_pred EEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCC
Confidence 3678899999999999999999999999999887653 367899999999999999999999999999997521
Q ss_pred ------------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHH
Q 021311 75 ------------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 112 (314)
Q Consensus 75 ------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 112 (314)
..|+|+||++++++.++++|+++++++++++++++.||
T Consensus 96 ~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta 175 (369)
T cd08301 96 RHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTG 175 (369)
T ss_pred chhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHH
Confidence 13789999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecCh---hhHHHH
Q 021311 113 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ---LEVKNV 188 (314)
Q Consensus 113 ~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~i 188 (314)
|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.+ ++++++.++++|++.++++.+ ...+.+
T Consensus 176 ~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~----~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v 250 (369)
T cd08301 176 LGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDL----NPSKFEQAKKFGVTEFVNPKDHDKPVQEVI 250 (369)
T ss_pred HHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC----CHHHHHHHHHcCCceEEcccccchhHHHHH
Confidence 999888889999999999987 9999999999999999 5666663 678899999999999998764 233557
Q ss_pred HHHhcCCCCCcEEEecCCCcc-HHHHHHhcccC-CEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHH
Q 021311 189 KGLLANLPEPALGFNCVGGNS-ASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC 265 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (314)
++++++ ++|++|||+|... ...++++++++ |+++.+|.... ...++.+..++ +++++.|++...+. .
T Consensus 251 ~~~~~~--~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~-------~ 320 (369)
T cd08301 251 AEMTGG--GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGGYK-------P 320 (369)
T ss_pred HHHhCC--CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCCCC-------h
Confidence 777765 4999999999864 58889999996 99999996543 23344433344 68999998765441 2
Q ss_pred HHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 266 RNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 266 ~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
+..++.+++++.+|.+++. ++.|+|+|+++||+.+.+++. . |++|
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-k~~~ 368 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-L-RCIL 368 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-e-eEEe
Confidence 2457889999999988763 578999999999999998875 3 8876
No 24
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1e-43 Score=313.73 Aligned_cols=295 Identities=23% Similarity=0.336 Sum_probs=242.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|+|+++||+|||.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 17 ~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C 95 (368)
T cd08300 17 IEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGEC 95 (368)
T ss_pred EEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCC
Confidence 35788999999999999999999999999998876532 57999999999999999999999999999987521
Q ss_pred -----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHH
Q 021311 75 -----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113 (314)
Q Consensus 75 -----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 113 (314)
..|+|+||+.++++.++++|+++++++++.+++++.|||
T Consensus 96 ~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~ 175 (368)
T cd08300 96 KFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGY 175 (368)
T ss_pred hhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhH
Confidence 136899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHHHH
Q 021311 114 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVK 189 (314)
Q Consensus 114 ~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~i~ 189 (314)
+++.+.+++++|++|||+|+ |++|++++|+|+.+|+. ++++.. ++++++.++++|+++++++++. ..+.++
T Consensus 176 ~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~----~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~ 250 (368)
T cd08300 176 GAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDI----NPDKFELAKKFGATDCVNPKDHDKPIQQVLV 250 (368)
T ss_pred HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC----CHHHHHHHHHcCCCEEEcccccchHHHHHHH
Confidence 99887789999999999986 99999999999999994 666653 7888899999999999988653 346677
Q ss_pred HHhcCCCCCcEEEecCCCc-cHHHHHHhcccC-CEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHH
Q 021311 190 GLLANLPEPALGFNCVGGN-SASKVLKFLSQG-GTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 266 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
+++++ + +|++|||+|+. ....++++++++ |+++.+|.... ....+....+. ++.++.++....+. ..
T Consensus 251 ~~~~~-g-~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~-------~~ 320 (368)
T cd08300 251 EMTDG-G-VDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWK-------SR 320 (368)
T ss_pred HHhCC-C-CcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccC-------cH
Confidence 77775 4 99999999975 568899999886 99999996532 22333333333 34566666554431 13
Q ss_pred HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 267 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 267 ~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+.+.++++++.+|++++. ++.|+|+|+++||+.+.+++. .|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~--~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS--IRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC--ceeeeC
Confidence 457788999999999863 578999999999999988764 398874
No 25
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.2e-43 Score=309.65 Aligned_cols=294 Identities=21% Similarity=0.250 Sum_probs=245.0
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|+|+++||+|||.++|+|++|++.+.+.+.....+|.++|||++|+|+++|+++..+ +||+|++.+.
T Consensus 13 ~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c 91 (349)
T TIGR03201 13 KTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGEC 91 (349)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCC
Confidence 368899999999999999999999999988744332223568999999999999999999887 9999987320
Q ss_pred --------------------CCCcccceEeeeccceEEcCC------CCCHHHhhcccccHHHHHHHHHHhhcCCCCCEE
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSK------DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI 128 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v 128 (314)
.+|+|+||+.++.+.++++|+ +++++.++.++.++.++|+++.+ .++++|++|
T Consensus 92 ~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~-~~~~~g~~V 170 (349)
T TIGR03201 92 ELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-AGLKKGDLV 170 (349)
T ss_pred hhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh-cCCCCCCEE
Confidence 158999999999999999999 89999999999999999999876 889999999
Q ss_pred EEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh----hHHHHHHHhcCCCCCc----E
Q 021311 129 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPA----L 200 (314)
Q Consensus 129 lI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~----~~~~i~~~~~~~g~~d----~ 200 (314)
+|+|+ |++|++++|+|+..|++++++.+ ++++++.++++|+++++++.+. ..+.+++++++.| +| +
T Consensus 171 lV~G~-G~vG~~a~~~a~~~G~~vi~~~~----~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g-~d~~~d~ 244 (349)
T TIGR03201 171 IVIGA-GGVGGYMVQTAKAMGAAVVAIDI----DPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARG-LRSTGWK 244 (349)
T ss_pred EEECC-CHHHHHHHHHHHHcCCeEEEEcC----CHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCC-CCCCcCE
Confidence 99999 99999999999999998777663 7888899999999999987653 3355777777766 76 8
Q ss_pred EEecCCCccH-HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcC
Q 021311 201 GFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG 279 (314)
Q Consensus 201 v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 279 (314)
+|||+|+... ..++++++++|+++.+|.... ..++++..++.+++++.|.+... .+.++.+++++++|
T Consensus 245 v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~i~~g 313 (349)
T TIGR03201 245 IFECSGSKPGQESALSLLSHGGTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP----------PDRYPAALDLVLDG 313 (349)
T ss_pred EEECCCChHHHHHHHHHHhcCCeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC----------HHHHHHHHHHHHcC
Confidence 9999998764 678999999999999996543 33445556666778888875421 14578899999999
Q ss_pred Ccccc--ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 280 KLKYD--MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 280 ~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++++. ++.|+|+|+++||+.+.+++..+ |+++++
T Consensus 314 ~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~-k~~~~~ 349 (349)
T TIGR03201 314 KIQLGPFVERRPLDQIEHVFAAAHHHKLKR-RAILTP 349 (349)
T ss_pred CCCcccceEEecHHHHHHHHHHHHcCCccc-eEEecC
Confidence 99763 56799999999999999998777 998864
No 26
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.1e-43 Score=310.38 Aligned_cols=294 Identities=24% Similarity=0.336 Sum_probs=243.9
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|.++++||+|||.++++|++|++.+.|..+ +.+|.++|||++|+|+++|++++++++||+|++...
T Consensus 17 ~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c 94 (365)
T cd08277 17 IEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGEC 94 (365)
T ss_pred EEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCC
Confidence 367889999999999999999999999999988765 357899999999999999999999999999987521
Q ss_pred ----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHH
Q 021311 75 ----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 114 (314)
Q Consensus 75 ----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 114 (314)
..|+|+||++++.+.++++|+++++++++++++++.|||+
T Consensus 95 ~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~ 174 (365)
T cd08277 95 SNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYG 174 (365)
T ss_pred chhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHH
Confidence 1378999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHHHHH
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVKG 190 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~i~~ 190 (314)
++.+.+++++|++|||+|+ |++|++++|+|+.+|+. ++++. .++++++.++++|++++++..+. ..+.+++
T Consensus 175 ~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~ 249 (365)
T cd08277 175 AAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD----INEDKFEKAKEFGATDFINPKDSDKPVSEVIRE 249 (365)
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCCcEeccccccchHHHHHHH
Confidence 9877789999999999986 99999999999999995 65555 26888899999999999987653 2456777
Q ss_pred HhcCCCCCcEEEecCCCcc-HHHHHHhcccC-CEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHH
Q 021311 191 LLANLPEPALGFNCVGGNS-ASKVLKFLSQG-GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 268 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (314)
+++ . ++|++|||+|... ...++++++++ |+++.+|...+...++++..++. ++++.|++.+.+. .+..
T Consensus 250 ~~~-~-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~-------~~~~ 319 (365)
T cd08277 250 MTG-G-GVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK-------SRSD 319 (365)
T ss_pred HhC-C-CCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC-------hHHH
Confidence 776 3 4999999999754 48899999885 99999996554334444444543 7888888765441 1245
Q ss_pred HHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 269 IDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 269 ~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
++.++++++++.+++. ++.|+++|+++||+.+.+++ . .|++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~k~~i~ 365 (365)
T cd08277 320 VPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-C-IRTVIT 365 (365)
T ss_pred HHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-C-ceEeeC
Confidence 7889999999987753 57899999999999998876 3 398874
No 27
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=5.5e-43 Score=309.91 Aligned_cols=293 Identities=15% Similarity=0.120 Sum_probs=229.0
Q ss_pred CccCCCCCCC-------CCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC
Q 021311 1 MIELPPVEVK-------ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP 73 (314)
Q Consensus 1 i~~~~~p~~~-------~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~ 73 (314)
++|+|.|+|+ ++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|++|++|++||||.+.+
T Consensus 16 ~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~ 93 (393)
T TIGR02819 16 VQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPF 93 (393)
T ss_pred EEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEcCccccccCCCEEEEec
Confidence 3678888874 689999999999999999999886542 4689999999999999999999999999997631
Q ss_pred C------------------------------------CCCcccceEeeecc--ceEEcCCCCCH----HHhhcccccHHH
Q 021311 74 P------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPM----EYAATIIVNPLT 111 (314)
Q Consensus 74 ~------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~----~~aa~~~~~~~t 111 (314)
. .+|+|+||++++.. +++++|++++. ..++++..++.+
T Consensus 94 ~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~t 173 (393)
T TIGR02819 94 NIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPT 173 (393)
T ss_pred ccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHH
Confidence 0 14899999999964 79999998753 356677778999
Q ss_pred HHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEec-Ch-hhHHHHH
Q 021311 112 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-SQ-LEVKNVK 189 (314)
Q Consensus 112 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~-~~-~~~~~i~ 189 (314)
+|+++.+ ++++++++|||.|+ |++|++++|+|+.+|++++++++. ++++++.++++|++. +++ .+ ...+.+.
T Consensus 174 a~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~---~~~r~~~a~~~Ga~~-v~~~~~~~~~~~v~ 247 (393)
T TIGR02819 174 GYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDL---NPARLAQARSFGCET-VDLSKDATLPEQIE 247 (393)
T ss_pred HHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCC---CHHHHHHHHHcCCeE-EecCCcccHHHHHH
Confidence 9999865 88999999999776 999999999999999998776653 678999999999975 444 33 3345677
Q ss_pred HHhcCCCCCcEEEecCCCc---------------cHHHHHHhcccCCEEEEEcCCCC-CCcc-----------cccccce
Q 021311 190 GLLANLPEPALGFNCVGGN---------------SASKVLKFLSQGGTMVTYGGMSK-KPIT-----------VSTSAFI 242 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~-----------~~~~~~~ 242 (314)
+++++.+ +|++|||+|.+ .+..++++++++|+++.+|.... .... +.....+
T Consensus 248 ~~~~~~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~ 326 (393)
T TIGR02819 248 QILGEPE-VDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGW 326 (393)
T ss_pred HHcCCCC-CcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhh
Confidence 7777665 99999999986 46889999999999999997532 2211 2222333
Q ss_pred ecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---c-eeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 243 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---M-ELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~-~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.+++++.+... ...+...++++++.+|++.+. + +.|+|+|+++||+.+.+++. + |++|++
T Consensus 327 ~~~~~i~g~~~----------~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~-Kvvi~~ 390 (393)
T TIGR02819 327 AKSHSFHTGQT----------PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-K-KFVIDP 390 (393)
T ss_pred ccCceEEeccC----------ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-e-EEEEeC
Confidence 44444444211 011234678999999999863 4 57999999999999998743 4 999874
No 28
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-42 Score=305.00 Aligned_cols=297 Identities=24% Similarity=0.275 Sum_probs=239.2
Q ss_pred ccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 2 IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 2 ~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
+|+|.|+| +++||+|||.++++|++|+........ ..+|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus 15 ~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c 92 (347)
T PRK10309 15 AESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTC 92 (347)
T ss_pred EECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCC
Confidence 57888987 589999999999999999875432111 135789999999999999999999999999998641
Q ss_pred --------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
..|+|++|+.++++.++++|+++++++++++. +..++|+++ +.+.++++++|+|+|+
T Consensus 93 ~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~- 169 (347)
T PRK10309 93 PECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGA- 169 (347)
T ss_pred cchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECC-
Confidence 15899999999999999999999999999874 466688886 4478999999999986
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCc-EEEecCCCc-cHHH
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGN-SASK 212 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d-~v~d~~g~~-~~~~ 212 (314)
|++|++++|+|+.+|++++++++ .++++++.++++|+++++++++...+++.+++.+.+ +| ++|||+|.+ .+..
T Consensus 170 g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~-~d~~v~d~~G~~~~~~~ 245 (347)
T PRK10309 170 GTIGLLAIQCAVALGAKSVTAID---INSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELR-FDQLILETAGVPQTVEL 245 (347)
T ss_pred CHHHHHHHHHHHHcCCCeEEEEC---CCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCC-CCeEEEECCCCHHHHHH
Confidence 99999999999999998544443 278888899999999999887655566777777665 88 999999985 5589
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccc---cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cce
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DME 286 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~ 286 (314)
++++++++|+++.+|.... ..+++ ...++.+++++.|++.+.... ..++.++++++++++|.+++ .++
T Consensus 246 ~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~ 319 (347)
T PRK10309 246 AIEIAGPRAQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNYSSP-----WPGQEWETASRLLTERKLSLEPLIAH 319 (347)
T ss_pred HHHHhhcCCEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccccCC-----cchhHHHHHHHHHHcCCCCchhheEE
Confidence 9999999999999996543 22232 234667899999986532100 01245778999999999864 257
Q ss_pred eeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 287 LVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 287 ~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.|+|+|+++||+.+.+++..| |+|+++
T Consensus 320 ~~~l~~~~~A~~~~~~~~~~g-Kvvv~~ 346 (347)
T PRK10309 320 RGSFESFAQAVRDLAGNPMPG-KVLLQI 346 (347)
T ss_pred EeeHHHHHHHHHHHhcCCcce-EEEEeC
Confidence 899999999999999988777 999875
No 29
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.8e-42 Score=303.96 Aligned_cols=298 Identities=22% Similarity=0.251 Sum_probs=233.6
Q ss_pred ccCCCCCCC-CCcEEEEEEeecCChhhhhhhccCC--CCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCc
Q 021311 2 IELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 78 (314)
Q Consensus 2 ~~~~~p~~~-~~eV~v~v~~~~i~~~D~~~~~~~~--~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~ 78 (314)
+|.+.|+|+ ++||+|||.|+|||+.|........ .....+|.++|||++|+|+++|+++++|++||+|+++. ++
T Consensus 26 ~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~ 102 (345)
T cd08293 26 EECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN---WP 102 (345)
T ss_pred EeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC---CC
Confidence 578888875 9999999999999999965433211 11124678999999999999999999999999999863 68
Q ss_pred ccceEeeeccceEEcCCCCCHH----HhhcccccHHHHHHHHHHhhcCCCC--CEEEEcCCCcHHHHHHHHHHHHcCC-c
Q 021311 79 WQSYVVKDQSVWHKVSKDSPME----YAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGI-H 151 (314)
Q Consensus 79 ~~~~~~~~~~~~~~~p~~~~~~----~aa~~~~~~~ta~~~l~~~~~~~~~--~~vlI~g~~g~~G~~a~~la~~~g~-~ 151 (314)
|+||++++++.++++|+++++. .+++++.+++|||+++.+.++++++ ++|||+|++|++|++++|+|+.+|+ +
T Consensus 103 ~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~ 182 (345)
T cd08293 103 WQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSR 182 (345)
T ss_pred ceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCE
Confidence 9999999999999999985432 2456677899999999887888877 9999999999999999999999999 6
Q ss_pred EEEEecCCCCcHHHHHHHHh-CCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 152 SINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 152 vi~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++++++ ++++.+.+++ +|+++++++++.. .+.++++++ .| +|++|||+|+..+..++++|+++|+++.+|..
T Consensus 183 Vi~~~~----s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~g-vd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 183 VVGICG----SDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EG-VDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred EEEEcC----CHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CC-ceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 887773 6778888876 9999999987644 466777765 44 99999999998888999999999999999843
Q ss_pred CCC--Cccccc------cc-ceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHH
Q 021311 230 SKK--PITVST------SA-FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSK 299 (314)
Q Consensus 230 ~~~--~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~a~~~ 299 (314)
... +..... .. ...++++..++.... .+....+.++.+++++.+|++++... .++++++++||+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~ 331 (345)
T cd08293 257 SQYNKDVPYPPPLPEATEAILKERNITRERFLVLN-----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQS 331 (345)
T ss_pred ecccCccCccccccchhHHHhhhcceEEEEEEeec-----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHH
Confidence 221 111111 01 122344444433211 13345677888999999999987643 4699999999999
Q ss_pred HhccCCCCCceEeeC
Q 021311 300 ALGLHGSQPKQVIKF 314 (314)
Q Consensus 300 ~~~~~~~~~k~vi~~ 314 (314)
+.+++..| |+|+++
T Consensus 332 ~~~~~~~g-kvvl~~ 345 (345)
T cd08293 332 MMNGGNIG-KQIVKV 345 (345)
T ss_pred HhcCCCCC-eEEEEC
Confidence 99988777 999875
No 30
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=302.87 Aligned_cols=296 Identities=25% Similarity=0.271 Sum_probs=240.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCc-cCCcceEEEEEEecCCCCCCCCCCEEeeCCCC-----
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS----- 75 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~-~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~----- 75 (314)
++.+.|.+.+++|+|||.++|||++|++.+.+..+.. ..|. ++|||++|+|+++| .++.+++||||.+.+..
T Consensus 16 ~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C 93 (350)
T COG1063 16 EEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHC 93 (350)
T ss_pred ccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCC
Confidence 4555566899999999999999999999999976543 3344 99999999999999 77889999999887531
Q ss_pred --------------------------CCcccceEeeeccceEE-cCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEE
Q 021311 76 --------------------------SGTWQSYVVKDQSVWHK-VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI 128 (314)
Q Consensus 76 --------------------------~g~~~~~~~~~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v 128 (314)
+|+|+||+++|.+++++ +|++++.+.+++ ..++.++|++........++.+|
T Consensus 94 ~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal-~epla~~~~~~a~~~~~~~~~~V 172 (350)
T COG1063 94 RYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAAL-TEPLATAYHGHAERAAVRPGGTV 172 (350)
T ss_pred hhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhh-cChhhhhhhhhhhccCCCCCCEE
Confidence 48999999999765555 578885555554 44999998884444556666699
Q ss_pred EEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEEEecCh-hhHHHHHHHhcCCCCCcEEEecCC
Q 021311 129 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ-LEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 129 lI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~-~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|+|+ |++|++++++++.+|+..+++++. +++|++.+++ .+++.+++... .....+.+.+++.| +|++|||+|
T Consensus 173 ~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~---~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g-~D~vie~~G 247 (350)
T COG1063 173 VVVGA-GPIGLLAIALAKLLGASVVIVVDR---SPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRG-ADVVIEAVG 247 (350)
T ss_pred EEECC-CHHHHHHHHHHHHcCCceEEEeCC---CHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCC-CCEEEECCC
Confidence 99999 999999999999999999988875 8999999988 77777776655 34466888888877 999999999
Q ss_pred Ccc-HHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-
Q 021311 207 GNS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD- 284 (314)
Q Consensus 207 ~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~- 284 (314)
... +..+++.++++|+++.+|........++...++.+++++.|++... .+..++.+++++.+|++.+.
T Consensus 248 ~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~---------~~~~~~~~~~ll~~g~i~~~~ 318 (350)
T COG1063 248 SPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS---------GREDFERALDLLASGKIDPEK 318 (350)
T ss_pred CHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCC---------CcccHHHHHHHHHcCCCChhH
Confidence 765 4899999999999999996654433566778889999999984311 12457889999999999986
Q ss_pred --ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 285 --MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 285 --~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++.++++++++||+.+.+++....|+++++
T Consensus 319 lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 319 LITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 678999999999999999765445999875
No 31
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.9e-42 Score=300.69 Aligned_cols=294 Identities=23% Similarity=0.272 Sum_probs=241.0
Q ss_pred CCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcce--EEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 5 PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEG--VGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 5 ~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~--~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.|+|+++||||||.|+++|+.|+....|..+.....|.++|+++ .|++..+|+.++.|++||+|+++ |+|+||
T Consensus 31 ~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~----g~~aey 106 (338)
T cd08295 31 KVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF----TGWEEY 106 (338)
T ss_pred CCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec----CCceeE
Confidence 348899999999999999999999988885432124578889754 45666678889999999999976 689999
Q ss_pred Eeeec-cceEEcC-CCCCHH-HhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 83 VVKDQ-SVWHKVS-KDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 83 ~~~~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
+++++ ..++++| +++++. +++.+++++.|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++++++++
T Consensus 107 ~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~-- 184 (338)
T cd08295 107 SLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG-- 184 (338)
T ss_pred EEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC--
Confidence 99999 7999995 678887 789999999999999988889999999999999999999999999999999888774
Q ss_pred CCcHHHHHHHHh-CCCcEEEecCh--hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcc-
Q 021311 160 AGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT- 235 (314)
Q Consensus 160 ~~~~~~~~~~~~-lg~~~~~~~~~--~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~- 235 (314)
++++.+.+++ +|+++++++.+ ...+.+++.++ . ++|++||++|+..+..++++++++|+++.+|........
T Consensus 185 --~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~-gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~ 260 (338)
T cd08295 185 --SDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-N-GIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEW 260 (338)
T ss_pred --CHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-C-CcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCC
Confidence 6888888988 99999998753 33455666664 4 499999999998789999999999999999864432211
Q ss_pred ----cccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHhccCCCCCce
Q 021311 236 ----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQPKQ 310 (314)
Q Consensus 236 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~k~ 310 (314)
.+....+.+++++.++....+ .....+.++.+++++.+|++++.. ..|+++++++|++.+.+++..| |+
T Consensus 261 ~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~G-kv 334 (338)
T cd08295 261 PEGVRNLLNIIYKRVKIQGFLVGDY-----LHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIG-KQ 334 (338)
T ss_pred CCCccCHHHHhhccceeeEEEehhh-----HHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCc-eE
Confidence 223445567788887655332 223456788999999999998764 4699999999999999998888 99
Q ss_pred EeeC
Q 021311 311 VIKF 314 (314)
Q Consensus 311 vi~~ 314 (314)
|+++
T Consensus 335 Vl~~ 338 (338)
T cd08295 335 VVKV 338 (338)
T ss_pred EEEC
Confidence 9875
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.2e-42 Score=299.50 Aligned_cols=279 Identities=18% Similarity=0.193 Sum_probs=223.5
Q ss_pred CccCCCCCCCCCcEEEEEEeecCC-hhhhhhhccCCCCC--CCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC---
Q 021311 1 MIELPPVEVKENDVCVKMLAAPIN-PSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--- 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~-~~D~~~~~~~~~~~--~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--- 74 (314)
+++.+.|+|+++||+|||.++||| ++|++.+.|.++.. ..+|.++|||++|+|+++|+++ +|++||+|+....
T Consensus 15 ~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~ 93 (308)
T TIGR01202 15 LREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCY 93 (308)
T ss_pred EEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEeCcccc
Confidence 357889999999999999999996 79999888876543 2579999999999999999998 6999999997421
Q ss_pred -----CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcC
Q 021311 75 -----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 149 (314)
Q Consensus 75 -----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g 149 (314)
..|+|+||++++++.++++|++++++. ++++ ...|||+++.+ . ..++++++|+|+ |++|++++|+|+.+|
T Consensus 94 ~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G 168 (308)
T TIGR01202 94 EDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAG 168 (308)
T ss_pred ccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcC
Confidence 159999999999999999999999865 4444 57899999966 3 346889999987 999999999999999
Q ss_pred CcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCcc-HHHHHHhcccCCEEEEEcC
Q 021311 150 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 150 ~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~ 228 (314)
++++++++. .+++++.+... .++|+.+. .+. ++|++|||+|++. +..++++++++|+++.+|.
T Consensus 169 ~~~v~~~~~---~~~rl~~a~~~---~~i~~~~~---------~~~-g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~ 232 (308)
T TIGR01202 169 GSPPAVWET---NPRRRDGATGY---EVLDPEKD---------PRR-DYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGF 232 (308)
T ss_pred CceEEEeCC---CHHHHHhhhhc---cccChhhc---------cCC-CCCEEEECCCCHHHHHHHHHhhhcCcEEEEEee
Confidence 998777753 55666555443 44544321 123 4999999999965 5899999999999999996
Q ss_pred CCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCC
Q 021311 229 MSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHG 305 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~ 305 (314)
.. .+.+++...++.+++++.++... ..+.++++++++++|++++. ++.|+|+|+++||+.+.+++.
T Consensus 233 ~~-~~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~ 301 (308)
T TIGR01202 233 YT-EPVNFDFVPAFMKEARLRIAAEW----------QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPD 301 (308)
T ss_pred cC-CCcccccchhhhcceEEEEeccc----------chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcC
Confidence 53 34556666677788888876432 12468899999999999863 578999999999999887765
Q ss_pred CCCceEee
Q 021311 306 SQPKQVIK 313 (314)
Q Consensus 306 ~~~k~vi~ 313 (314)
.+ |++|+
T Consensus 302 ~~-Kv~~~ 308 (308)
T TIGR01202 302 CL-KMILD 308 (308)
T ss_pred ce-EEEeC
Confidence 55 99874
No 33
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.5e-41 Score=297.61 Aligned_cols=310 Identities=52% Similarity=0.834 Sum_probs=260.3
Q ss_pred ccCCCCCCCC-CcEEEEEEeecCChhhhhhhccCCCCCCC----CCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCC
Q 021311 2 IELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK----VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 76 (314)
Q Consensus 2 ~~~~~p~~~~-~eV~v~v~~~~i~~~D~~~~~~~~~~~~~----~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~ 76 (314)
++.|.|+|.+ ++|+||+.++++|+.|.....|..+..+. +|.++|||++|+|+++|+++..+++||+|++.....
T Consensus 19 ~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 98 (341)
T cd08290 19 ESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGL 98 (341)
T ss_pred eecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCCCC
Confidence 5678888887 99999999999999999998887653322 678999999999999999999999999999986335
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.....++++++|||+|++|++|++++++|+..|+++++++
T Consensus 99 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~ 178 (341)
T cd08290 99 GTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVV 178 (341)
T ss_pred ccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEE
Confidence 89999999999999999999999999999999999999998878899999999999999999999999999999999988
Q ss_pred cCCCCcHHHHHHHHhCCCcEEEecChh----hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 157 RDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~lg~~~~~~~~~~----~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
+.....+++++.++++|++++++++.. ..+.++.++++ + +|++|||+|+......+++++++|+++.+|.....
T Consensus 179 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~-~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 256 (341)
T cd08290 179 RDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-R-PKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ 256 (341)
T ss_pred cCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-C-ceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC
Confidence 642212267788888999999988763 44567777666 4 99999999998888899999999999999854433
Q ss_pred CcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceee---ccccHHHHHHHHhccCCCCC
Q 021311 233 PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELV---PFNNFQTALSKALGLHGSQP 308 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~---~~~~~~~a~~~~~~~~~~~~ 308 (314)
+..+.+...+.+++++.+.....+.....+......++.+++++.+|.+.+. ...+ ++++++++++.+.+++..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 335 (341)
T cd08290 257 PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGG- 335 (341)
T ss_pred CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCC-
Confidence 4445554567899999998876543212355666788999999999999875 3456 9999999999999988777
Q ss_pred ceEeeC
Q 021311 309 KQVIKF 314 (314)
Q Consensus 309 k~vi~~ 314 (314)
|+|+++
T Consensus 336 k~v~~~ 341 (341)
T cd08290 336 KQVLVM 341 (341)
T ss_pred eEEEeC
Confidence 999874
No 34
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=6e-42 Score=298.03 Aligned_cols=290 Identities=23% Similarity=0.329 Sum_probs=236.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
+|.+.|+|+++||+|||.|+++|+.++. |.++.. ..|.++|+|++|+|+++|+ .|++||+|+++ ++|++
T Consensus 22 ~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----~~~~~ 90 (325)
T TIGR02825 22 KTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----PGWTS 90 (325)
T ss_pred EeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe----cCcee
Confidence 5789999999999999999999997653 333222 3478999999999999774 69999999986 37999
Q ss_pred eEeeeccceEEc----CCCCCHHHh-hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 82 YVVKDQSVWHKV----SKDSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 82 ~~~~~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
|++++.+.+.++ |++++++++ +++++++.|||+++.+.+++++|++|||+|++|++|++++|+|+..|+++++++
T Consensus 91 ~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~ 170 (325)
T TIGR02825 91 HSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAA 170 (325)
T ss_pred eEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEe
Confidence 999999988888 999999987 678889999999998889999999999999999999999999999999998887
Q ss_pred cCCCCcHHHHHHHHhCCCcEEEecChh-hHH-HHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC--
Q 021311 157 RDRAGSDEAKEKLKGLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-- 232 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~-~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-- 232 (314)
+ ++++.+.++++|+++++++++. +.. .++..+ +.+ +|++|||+|++.+..++++++++|+++.+|.....
T Consensus 171 ~----s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~g-vdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 244 (325)
T TIGR02825 171 G----SDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDG-YDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNR 244 (325)
T ss_pred C----CHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCC-eEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhccc
Confidence 4 6788999999999999998763 443 344444 344 99999999998889999999999999999854321
Q ss_pred --Ccc--cccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccc-eeeccccHHHHHHHHhccCCCC
Q 021311 233 --PIT--VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDM-ELVPFNNFQTALSKALGLHGSQ 307 (314)
Q Consensus 233 --~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~~ 307 (314)
..+ .....++.+++++.++....+ .+....+.++.+++++++|++++.. ..|+++++++|++.+.+++..|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g 320 (325)
T TIGR02825 245 TGPLPPGPPPEIVIYQELRMEGFIVNRW----QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLG 320 (325)
T ss_pred CCCCCCCcchHHHhhhcceEeEEEehhh----hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCC
Confidence 111 123345567888888765433 1233456788999999999999864 4699999999999999998887
Q ss_pred CceEee
Q 021311 308 PKQVIK 313 (314)
Q Consensus 308 ~k~vi~ 313 (314)
|+|++
T Consensus 321 -kvVv~ 325 (325)
T TIGR02825 321 -KTIVK 325 (325)
T ss_pred -eEEeC
Confidence 99874
No 35
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=6.3e-42 Score=301.19 Aligned_cols=291 Identities=22% Similarity=0.270 Sum_probs=224.4
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCC--CCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC----
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP---- 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~--~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~---- 74 (314)
++++|.|+|+++||+|||.++|+|++|++.+.|.++..+ .+|.++|||++|+|+++|++ +.|++||+|+....
T Consensus 15 ~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg 93 (355)
T cd08230 15 VVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPG 93 (355)
T ss_pred EEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCC
Confidence 367899999999999999999999999999998754322 46889999999999999999 99999999987531
Q ss_pred -------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHh------hcCC
Q 021311 75 -------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF------TTLN 123 (314)
Q Consensus 75 -------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~------~~~~ 123 (314)
.+|+|+||++++.+.++++|++++ + ++++..+..++++++... .+.+
T Consensus 94 ~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~ 171 (355)
T cd08230 94 KCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTW 171 (355)
T ss_pred cChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHHHHHHHHhhhhhhcccC
Confidence 148899999999999999999999 4 344444666655554321 2357
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
+|++|+|+|+ |++|++++|+|+..|++++++.+.. .++++++.++++|+++ +++.+....+ .. . .. ++|++||
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~-v~~~~~~~~~-~~-~-~~-~~d~vid 244 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATY-VNSSKTPVAE-VK-L-VG-EFDLIIE 244 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE-ecCCccchhh-hh-h-cC-CCCEEEE
Confidence 8999999997 9999999999999999887777421 1478888999999987 4555443322 11 1 22 4999999
Q ss_pred cCCCc-cHHHHHHhcccCCEEEEEcCCCC-CCcccc----cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHH
Q 021311 204 CVGGN-SASKVLKFLSQGGTMVTYGGMSK-KPITVS----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAR 277 (314)
Q Consensus 204 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 277 (314)
|+|.+ .+..++++++++|+++.+|.... ...+++ ...++.+++++.|++... . +.++.+++++.
T Consensus 245 ~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~------~----~~~~~~~~~l~ 314 (355)
T cd08230 245 ATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN------K----RHFEQAVEDLA 314 (355)
T ss_pred CcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc------h----hhHHHHHHHHH
Confidence 99986 45899999999999999997655 234444 345677999999975422 1 33566777777
Q ss_pred cCC------cccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 278 EGK------LKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 278 ~g~------~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++. +++. +++|+++|+++||+.+.++. . |+||+|
T Consensus 315 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~-K~v~~~ 355 (355)
T cd08230 315 QWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--I-KVVIEW 355 (355)
T ss_pred hcccccccchHHheeeeecHHHHHHHHHhcccCC--e-EEEeeC
Confidence 766 3333 56899999999999987543 4 999986
No 36
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.3e-41 Score=297.37 Aligned_cols=293 Identities=24% Similarity=0.335 Sum_probs=242.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCC---CC-------CCCCCccCCcceEEEEEEecCCCCCCCCCCEEee
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVY---PV-------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 71 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~---~~-------~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~ 71 (314)
++++.|+|+++||+||+.++++|++|+....+.. +. ...+|.++|||++|+|+++|+++++|++||+|.+
T Consensus 15 ~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 94 (351)
T cd08233 15 EEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVV 94 (351)
T ss_pred EeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEE
Confidence 5788899999999999999999999988765321 10 1136889999999999999999999999999997
Q ss_pred CCC---------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCC
Q 021311 72 SPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS 124 (314)
Q Consensus 72 ~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 124 (314)
... .+|+|++|+.++.+.++++|+++++++++.+ .+..|||+++ ..+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~ 172 (351)
T cd08233 95 EPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKP 172 (351)
T ss_pred CCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCC
Confidence 321 1489999999999999999999999998876 5788999999 5689999
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEE
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~ 202 (314)
|++|+|+|+ |.+|++++|+|+.+|+ +++++. .++++.+.++++|++.++++++. ..+++++.+++.+ +|+++
T Consensus 173 g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~-~d~vi 246 (351)
T cd08233 173 GDTALVLGA-GPIGLLTILALKAAGASKIIVSE----PSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGG-VDVSF 246 (351)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCC-CCEEE
Confidence 999999986 9999999999999999 555554 26778888889999999998765 3466888877765 99999
Q ss_pred ecCCC-ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCc
Q 021311 203 NCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL 281 (314)
Q Consensus 203 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 281 (314)
||+|. ..+..++++++++|+++.+|... .+.++++..++.+++++.+.+... ++.++++++++.+|++
T Consensus 247 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~~~~~g~l 315 (351)
T cd08233 247 DCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYT----------REDFEEVIDLLASGKI 315 (351)
T ss_pred ECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccC----------cchHHHHHHHHHcCCC
Confidence 99986 45688999999999999999655 445566666778899999876421 2567899999999999
Q ss_pred ccc---ceeeccccH-HHHHHHHhccCCCCCceEee
Q 021311 282 KYD---MELVPFNNF-QTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 282 ~~~---~~~~~~~~~-~~a~~~~~~~~~~~~k~vi~ 313 (314)
++. ++.|+++|+ ++|++.+.+++..++|+||.
T Consensus 316 ~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 316 DAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred ChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 653 458999996 78999999998763499873
No 37
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.2e-41 Score=296.26 Aligned_cols=295 Identities=24% Similarity=0.298 Sum_probs=241.2
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCC------CCCCCEEeeCCC
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR------LAPGDWVIPSPP 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~------~~~Gd~V~~~~~ 74 (314)
+++++.|+|+++||+|||.++++|++|+....|.++. ..+|.++|||++|+|+++|+++++ |++||+|+++..
T Consensus 15 ~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~ 93 (361)
T cd08231 15 IREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVG 93 (361)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEccc
Confidence 3578889999999999999999999999999887653 357899999999999999999986 999999998721
Q ss_pred ---------------------------------CCCcccceEeeecc-ceEEcCCCCCHHHhhcccccHHHHHHHHHHhh
Q 021311 75 ---------------------------------SSGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT 120 (314)
Q Consensus 75 ---------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~ 120 (314)
..|+|++|+.++++ .++++|++++++.+++++++++|||+++.+..
T Consensus 94 ~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~ 173 (361)
T cd08231 94 APCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAG 173 (361)
T ss_pred CCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhcc
Confidence 24899999999986 79999999999999999899999999998877
Q ss_pred cCCCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH----HHHHHHhcCC
Q 021311 121 TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLLANL 195 (314)
Q Consensus 121 ~~~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~----~~i~~~~~~~ 195 (314)
..+++++|||+|+ |.+|++++++|+.+|+ +++++.+ ++++.+.++++|++.++++++... ..+++.+++.
T Consensus 174 ~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~----~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~ 248 (361)
T cd08231 174 PVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDG----SPERLELAREFGADATIDIDELPDPQRRAIVRDITGGR 248 (361)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC----CHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCC
Confidence 7779999999986 9999999999999999 7777763 678888889999999988765322 4577777776
Q ss_pred CCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHH
Q 021311 196 PEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLL 273 (314)
Q Consensus 196 g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (314)
+ +|++|||+|+. ....++++++++|+++.+|.... ...++....++.+++++.+++..+ + +.+++++
T Consensus 249 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~ 317 (361)
T cd08231 249 G-ADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD------P----SHLYRAV 317 (361)
T ss_pred C-CcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC------c----hhHHHHH
Confidence 6 99999999874 45889999999999999996542 223444445677899988876432 2 2355666
Q ss_pred HHHHcC--Ccc--cc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 274 CLAREG--KLK--YD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 274 ~~l~~g--~~~--~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++.++ .+. +. ++.|+++++++||+.+.+++. + |+||++
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~-k~vi~~ 361 (361)
T cd08231 318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-L-KVVIDP 361 (361)
T ss_pred HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-e-EEEeCC
Confidence 777666 333 22 567999999999999988763 4 999874
No 38
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.2e-41 Score=295.63 Aligned_cols=281 Identities=19% Similarity=0.197 Sum_probs=215.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC---CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC---
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--- 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--- 74 (314)
++|+|.|+ +++||+|||.++|||++|++.+.|.+.. ...+|.++|||++|+|+++|.. .|++||+|...+.
T Consensus 16 ~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~ 92 (341)
T cd08237 16 VTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPV 92 (341)
T ss_pred EeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCc
Confidence 35788885 9999999999999999999999987532 1257999999999999998764 7999999987531
Q ss_pred --------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHh--hcCCCCCEEEEcC
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGDSIVQNG 132 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~g 132 (314)
.+|+|+||+++++++++++|+++++++||++. +++++|+++.+. +.+++|++|||.|
T Consensus 93 ~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G 171 (341)
T cd08237 93 EKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWG 171 (341)
T ss_pred hhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEEC
Confidence 14889999999999999999999999887654 888999998643 4578999999999
Q ss_pred CCcHHHHHHHHHHHH-cCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCc--
Q 021311 133 ATSIVGQCIIQIARH-RGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-- 208 (314)
Q Consensus 133 ~~g~~G~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~-- 208 (314)
+ |++|++++|+++. .|+ +++++.. ++++++.++.+++++.++ . ...+.+ +|++|||+|+.
T Consensus 172 ~-G~vGl~~~~~a~~~~g~~~vi~~~~----~~~k~~~a~~~~~~~~~~---~-------~~~~~g-~d~viD~~G~~~~ 235 (341)
T cd08237 172 D-GNLGYITALLLKQIYPESKLVVFGK----HQEKLDLFSFADETYLID---D-------IPEDLA-VDHAFECVGGRGS 235 (341)
T ss_pred C-CHHHHHHHHHHHHhcCCCcEEEEeC----cHhHHHHHhhcCceeehh---h-------hhhccC-CcEEEECCCCCcc
Confidence 7 9999999999986 565 5555552 677888888766654331 1 111223 99999999963
Q ss_pred --cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcC-----Cc
Q 021311 209 --SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG-----KL 281 (314)
Q Consensus 209 --~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-----~~ 281 (314)
.+..++++++++|+++.+|.. ..+.+++...++.+++++.|+.... .+.++++++++.++ .+
T Consensus 236 ~~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~~k~~~i~g~~~~~----------~~~~~~~~~~~~~~~~~~~~l 304 (341)
T cd08237 236 QSAINQIIDYIRPQGTIGLMGVS-EYPVPINTRMVLEKGLTLVGSSRST----------REDFERAVELLSRNPEVAEYL 304 (341)
T ss_pred HHHHHHHHHhCcCCcEEEEEeec-CCCcccCHHHHhhCceEEEEecccC----------HHHHHHHHHHHHhCCcccCCh
Confidence 358899999999999999954 3344566666778999999875421 14577889999998 34
Q ss_pred ccc-ceeeccc---cHHHHHHHHhccCCCCCceEeeC
Q 021311 282 KYD-MELVPFN---NFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 282 ~~~-~~~~~~~---~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++. ++.|+++ ++.++|+.+.++ ..| |+||++
T Consensus 305 ~~~i~~~~~l~~l~~~~~a~~~~~~~-~~g-Kvvi~~ 339 (341)
T cd08237 305 RKLVGGVFPVRSINDIHRAFESDLTN-SWG-KTVMEW 339 (341)
T ss_pred HHHhccccccccHHHHHHHHHHHhhc-Ccc-eEEEEe
Confidence 443 4679985 555555555543 456 999875
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.7e-41 Score=299.85 Aligned_cols=296 Identities=15% Similarity=0.122 Sum_probs=232.2
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhh-ccCC-CC----CCCCCccCCcceEEEEEEecCCCC-CCCCCCEEeeCC
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVY-PV----RPKVPAVGGYEGVGEVYSVGSAVT-RLAPGDWVIPSP 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~-~~~~-~~----~~~~p~~~G~e~~G~V~~~G~~v~-~~~~Gd~V~~~~ 73 (314)
++++|.|+|+++||+|||.++|+|++|++.+ .+.. +. ...+|.++|||++|+|+++|++|+ .|++||+|++.+
T Consensus 16 ~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~ 95 (410)
T cd08238 16 LEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQP 95 (410)
T ss_pred EEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcC
Confidence 3678999999999999999999999999976 4532 11 013688999999999999999998 699999998853
Q ss_pred C---------------CCCcccceEeeecc----ceEEcCCCCCHHHhhcccccHH---HHHHHH--------HHhhcCC
Q 021311 74 P---------------SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPL---TALRML--------EDFTTLN 123 (314)
Q Consensus 74 ~---------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~---ta~~~l--------~~~~~~~ 123 (314)
. .+|+|+||++++++ .++++|+++++++++.+. ++. +++.++ .+.++++
T Consensus 96 ~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~ 174 (410)
T cd08238 96 ALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIK 174 (410)
T ss_pred CcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCC
Confidence 1 15899999999987 689999999999988652 222 233332 3457889
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCC---cEEEEecCCCCcHHHHHHHHhC--------CCc-EEEecCh--hhHHHHH
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGL--------GAD-EVFTESQ--LEVKNVK 189 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~~~l--------g~~-~~~~~~~--~~~~~i~ 189 (314)
+|++|+|+|++|++|++++|+|+.+|+ +++++. .++++++.++++ |++ .++++.+ ...+.++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~----~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~ 250 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTD----VNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLM 250 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEc----CCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHH
Confidence 999999999889999999999999864 565555 378888899887 666 5677653 3446678
Q ss_pred HHhcCCCCCcEEEecCCC-ccHHHHHHhcccCCEEEEEcCCC-CC-CcccccccceecceEEEEEechhhccccCHHHHH
Q 021311 190 GLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMS-KK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 266 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
+++++.+ +|++||++|. ..+..++++++++|+++.++... .. ..+++...++.+++++.|++... .
T Consensus 251 ~~t~g~g-~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~ 319 (410)
T cd08238 251 ELTGGQG-FDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN----------T 319 (410)
T ss_pred HHhCCCC-CCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC----------H
Confidence 8887766 9999999986 44588999999999888775432 21 23556667788999999976432 2
Q ss_pred HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 267 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 267 ~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+.++++++++++|++++. ++.|+|+++++||+.+. ++..| |+|+.+
T Consensus 320 ~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~g-Kvvl~~ 368 (410)
T cd08238 320 DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGG-KKLIYT 368 (410)
T ss_pred HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCc-eEEEEC
Confidence 457889999999999974 57899999999999999 66666 999863
No 40
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=9.6e-41 Score=291.14 Aligned_cols=290 Identities=25% Similarity=0.315 Sum_probs=237.3
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
++++.|+|+++||+|||.+++||+.|...... + ..+|.++|+|++|+|++ .++.|++||+|+++ ++|++
T Consensus 24 ~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~----~~~~~ 92 (329)
T cd08294 24 VEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS----FGWRT 92 (329)
T ss_pred EecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---CCCCCCCCCEEEee----CCeee
Confidence 57899999999999999999999987653211 1 14588999999999985 45689999999975 47999
Q ss_pred eEeeecc---ceEEcCCCCC-----HHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEE
Q 021311 82 YVVKDQS---VWHKVSKDSP-----MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 153 (314)
Q Consensus 82 ~~~~~~~---~~~~~p~~~~-----~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi 153 (314)
|++++.+ .++++|++++ ...+++++.+++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++++
T Consensus 93 ~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi 172 (329)
T cd08294 93 HTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVI 172 (329)
T ss_pred EEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEE
Confidence 9999999 9999999998 2333467889999999998889999999999999999999999999999999988
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
++++ ++++.+.++++|+++++++++.. .+++++.++ . ++|++||++|++....++++++++|+++.+|.....
T Consensus 173 ~~~~----s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~-gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~ 246 (329)
T cd08294 173 GCAG----SDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-D-GIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTY 246 (329)
T ss_pred EEeC----CHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-C-CcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhcc
Confidence 8874 77889999999999999987654 456776665 4 499999999998889999999999999999853221
Q ss_pred Cc------ccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCC
Q 021311 233 PI------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHG 305 (314)
Q Consensus 233 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~ 305 (314)
.. .......+.+++++.+++...+ .....+.++.+++++.+|++++. ...|+++++++|++.+.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~ 321 (329)
T cd08294 247 NDKEPKKGPYVQETIIFKQLKMEGFIVYRW-----QDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGEN 321 (329)
T ss_pred CCCCCCcCcccHHHHhhhcceEEEEEhhhh-----HHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCC
Confidence 11 1222345567888888765332 13445678899999999999875 356999999999999999988
Q ss_pred CCCceEeeC
Q 021311 306 SQPKQVIKF 314 (314)
Q Consensus 306 ~~~k~vi~~ 314 (314)
.| |+|+++
T Consensus 322 ~g-kvvv~~ 329 (329)
T cd08294 322 TG-KAIVKV 329 (329)
T ss_pred CC-eEEEeC
Confidence 87 999874
No 41
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.5e-40 Score=286.85 Aligned_cols=305 Identities=39% Similarity=0.626 Sum_probs=261.5
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
++.+.|++.+++|+||+.++++|+.|...+.+.++..+.+|..+|+|++|+|+++|++++.+++||+|++... .|+|++
T Consensus 17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g~~~~ 95 (323)
T cd05282 17 VSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-EGTWQE 95 (323)
T ss_pred EeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC-CCccee
Confidence 4567888999999999999999999999888776544456789999999999999999999999999999853 389999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|+.++.+.++++|+++++.+++.++..+.+||+++...+.+.+++++||+|++|.+|++++++|+.+|++++++++
T Consensus 96 ~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~---- 171 (323)
T cd05282 96 YVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR---- 171 (323)
T ss_pred EEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec----
Confidence 9999999999999999999999999999999999988888999999999999999999999999999999988885
Q ss_pred cHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccccc
Q 021311 162 SDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSA 240 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 240 (314)
++++++.++++|.++++++++. ....+++.+++.+ +|+++||+|+......+++++++|+++.+|........++...
T Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 250 (323)
T cd05282 172 RDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAG-ARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSV 250 (323)
T ss_pred ChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCC-ceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHH
Confidence 5677888889999999988764 4466787877776 9999999999888888999999999999986544333344444
Q ss_pred ceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 241 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+..+++++.+..+..+.....+....+.++.+++++.++.+.+. ++.|++++++++|+.+.+++..+ |+|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~ 323 (323)
T cd05282 251 FIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGG-KVLLT 323 (323)
T ss_pred HhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCc-eEeeC
Confidence 44589999998876654322567778889999999999998865 57899999999999999988777 88874
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2e-40 Score=290.38 Aligned_cols=294 Identities=27% Similarity=0.328 Sum_probs=249.1
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----- 74 (314)
++.+.|++.+++|+||+.++++|++|+....+.++. ...+|.++|+|++|+|+++|+++..+++||+|+++..
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 95 (340)
T cd05284 16 EDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGT 95 (340)
T ss_pred EeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCC
Confidence 467888899999999999999999999998887652 3356889999999999999999999999999998641
Q ss_pred ---------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHh-hcCCCCCEEEEcC
Q 021311 75 ---------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF-TTLNSGDSIVQNG 132 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~g 132 (314)
..|+|++|+.++++.++++|+++++++++.++..+.|||+++.+. ..+.++++|||+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g 175 (340)
T cd05284 96 CRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG 175 (340)
T ss_pred ChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEc
Confidence 158999999999999999999999999999999999999999876 4688999999999
Q ss_pred CCcHHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC-ccH
Q 021311 133 ATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSA 210 (314)
Q Consensus 133 ~~g~~G~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~-~~~ 210 (314)
+ |.+|++++++|+.+| .+++.+++ ++++.+.++++|+++++++++...+++++++++.+ +|+++||+|+ ...
T Consensus 176 ~-~~vg~~~~~~a~~~g~~~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~-~dvvld~~g~~~~~ 249 (340)
T cd05284 176 V-GGLGHIAVQILRALTPATVIAVDR----SEEALKLAERLGADHVLNASDDVVEEVRELTGGRG-ADAVIDFVGSDETL 249 (340)
T ss_pred C-cHHHHHHHHHHHHhCCCcEEEEeC----CHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCC-CCEEEEcCCCHHHH
Confidence 6 679999999999999 78887773 67788888999999999988765566877777665 9999999997 556
Q ss_pred HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeecc
Q 021311 211 SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPF 290 (314)
Q Consensus 211 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 290 (314)
..++++++++|+++.+|.... .++.....+.+++++.+..... ...++.+++++.+|.+++.++.|++
T Consensus 250 ~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~l~~~~~~~~~ 317 (340)
T cd05284 250 ALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT----------RAELVEVVALAESGKVKVEITKFPL 317 (340)
T ss_pred HHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc----------HHHHHHHHHHHHhCCCCcceEEEeH
Confidence 899999999999999985432 2333334356888888865421 2457788899999999887788999
Q ss_pred ccHHHHHHHHhccCCCCCceEeeC
Q 021311 291 NNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 291 ~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++|++.+.+++..+ |+++.+
T Consensus 318 ~~~~~a~~~~~~~~~~g-kvv~~~ 340 (340)
T cd05284 318 EDANEALDRLREGRVTG-RAVLVP 340 (340)
T ss_pred HHHHHHHHHHHcCCccc-eEEecC
Confidence 99999999999988887 998864
No 43
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.2e-40 Score=286.71 Aligned_cols=290 Identities=21% Similarity=0.279 Sum_probs=244.1
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
++++|.|+++++||+||+.++++|++|+..+.|..+.. .+|..+|||++|+|+++|++++++++||+|++.+
T Consensus 15 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~ 93 (333)
T cd08296 15 LVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL-SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGT 93 (333)
T ss_pred EEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC-CCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCC
Confidence 35788899999999999999999999999988866432 4588999999999999999999999999998721
Q ss_pred --------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 74 --------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 74 --------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
...|+|++|+.++.+.++++|+++++++++.++.++.+||+++.. .+++++++|||+|
T Consensus 94 ~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g- 171 (333)
T cd08296 94 CDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG- 171 (333)
T ss_pred ChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-
Confidence 114899999999999999999999999999999999999999976 5899999999999
Q ss_pred CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCC-ccHH
Q 021311 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGG-NSAS 211 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~-~~~~ 211 (314)
+|++|++++++|+.+|++++.+++ ++++++.++++|+++++++.+... +.++.+ . ++|+++|+.|. ....
T Consensus 172 ~g~iG~~~~~~a~~~G~~vi~~~~----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~-~~d~vi~~~g~~~~~~ 243 (333)
T cd08296 172 IGGLGHLAVQYAAKMGFRTVAISR----GSDKADLARKLGAHHYIDTSKEDVAEALQEL---G-GAKLILATAPNAKAIS 243 (333)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeC----ChHHHHHHHHcCCcEEecCCCccHHHHHHhc---C-CCCEEEECCCchHHHH
Confidence 599999999999999999888774 677888999999999998876433 445544 2 39999999864 5568
Q ss_pred HHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccc
Q 021311 212 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFN 291 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 291 (314)
.++++++++|+++.+|... ...+++...++.+++++.++.... .+.++.+++++.++.+++.++.|+++
T Consensus 244 ~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~~~l~~~v~~~~~~ 312 (333)
T cd08296 244 ALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT----------ALDSEDTLKFSALHGVRPMVETFPLE 312 (333)
T ss_pred HHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC----------HHHHHHHHHHHHhCCCCceEEEEEHH
Confidence 8999999999999999654 334455556668999999976321 13466778888899888767789999
Q ss_pred cHHHHHHHHhccCCCCCceEee
Q 021311 292 NFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 292 ~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
++.+||+.+.+++..| |+|++
T Consensus 313 ~~~~a~~~~~~~~~~g-k~v~~ 333 (333)
T cd08296 313 KANEAYDRMMSGKARF-RVVLT 333 (333)
T ss_pred HHHHHHHHHHCCCCce-eEEeC
Confidence 9999999999998888 99874
No 44
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.8e-40 Score=288.18 Aligned_cols=292 Identities=25% Similarity=0.363 Sum_probs=243.7
Q ss_pred CCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC-------------------CCCCCccCCcceEEEEEEecCCCCCCC
Q 021311 4 LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------------------RPKVPAVGGYEGVGEVYSVGSAVTRLA 64 (314)
Q Consensus 4 ~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~-------------------~~~~p~~~G~e~~G~V~~~G~~v~~~~ 64 (314)
++.|++.+++|+|||.++++|++|+....|.++. ...+|.++|||++|+|+++|++++.|+
T Consensus 21 ~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 100 (350)
T cd08274 21 VPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTAR 100 (350)
T ss_pred CCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCC
Confidence 4667789999999999999999999988775431 235788999999999999999999999
Q ss_pred CCCEEeeCC------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCC
Q 021311 65 PGDWVIPSP------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGD 126 (314)
Q Consensus 65 ~Gd~V~~~~------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 126 (314)
+||+|++.. ...|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ..+++++++
T Consensus 101 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~ 179 (350)
T cd08274 101 IGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGE 179 (350)
T ss_pred CCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCC
Confidence 999999842 1148999999999999999999999999999999999999998 558899999
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
++||+|++|++|++++++|+.+|++++.+++ ++ +++.++++|++.+.+........ ...+.+.+ +|++|||+|
T Consensus 180 ~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~----~~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~-~d~vi~~~g 252 (350)
T cd08274 180 TVLVTGASGGVGSALVQLAKRRGAIVIAVAG----AA-KEEAVRALGADTVILRDAPLLAD-AKALGGEP-VDVVADVVG 252 (350)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC----ch-hhHHHHhcCCeEEEeCCCccHHH-HHhhCCCC-CcEEEecCC
Confidence 9999999999999999999999999888873 33 77888889987666655444444 55566655 999999999
Q ss_pred CccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-c
Q 021311 207 GNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-M 285 (314)
Q Consensus 207 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~ 285 (314)
+..+..++++++++|+++.+|........++...++.+++++.++.... .+.++.+++++.++++.+. +
T Consensus 253 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~ 322 (350)
T cd08274 253 GPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT----------REVFRRLVRYIEEGEIRPVVA 322 (350)
T ss_pred HHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC----------HHHHHHHHHHHHCCCcccccc
Confidence 9888999999999999999985533324455556677889998876521 3567889999999998764 5
Q ss_pred eeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 286 ELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+.+++++++++++.+..++..+ |+|+++
T Consensus 323 ~~~~~~~~~~a~~~~~~~~~~~-kvvi~~ 350 (350)
T cd08274 323 KTFPLSEIREAQAEFLEKRHVG-KLVLVP 350 (350)
T ss_pred cccCHHHHHHHHHHHhcCCCce-EEEEeC
Confidence 6799999999999999887777 999864
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=7e-40 Score=292.08 Aligned_cols=295 Identities=21% Similarity=0.283 Sum_probs=244.8
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC---------CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 72 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~---------~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~ 72 (314)
+++|.|.++++||+|++.++++|.+|++...+.... ....+.++|||++|+|+++|++++.+++||+|++.
T Consensus 33 ~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 112 (393)
T cd08246 33 EDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVH 112 (393)
T ss_pred eecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEe
Confidence 567888899999999999999999999887664110 00123588999999999999999999999999987
Q ss_pred CC---------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHh--hcCC
Q 021311 73 PP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLN 123 (314)
Q Consensus 73 ~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~ 123 (314)
.. ..|+|++|++++...++++|+++++++++.++.++.|||+++... ++++
T Consensus 113 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~ 192 (393)
T cd08246 113 CSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVK 192 (393)
T ss_pred ccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCC
Confidence 41 148999999999999999999999999999999999999998765 6789
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh--------------------
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-------------------- 183 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-------------------- 183 (314)
++++|+|+|++|++|++++++|+.+|++++++++ ++++++.++++|+++++++++.
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~----s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVS----SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKE 268 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhc
Confidence 9999999999999999999999999999888773 7788899999999998886432
Q ss_pred ---hHHHHHHHhcCC-CCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccc
Q 021311 184 ---EVKNVKGLLANL-PEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSS 259 (314)
Q Consensus 184 ---~~~~i~~~~~~~-g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (314)
+.+.+++++++. + +|++|||+|+.....++++++++|+++.+|........+....++.++.++.+.+...+
T Consensus 269 ~~~~~~~v~~l~~~~~g-~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~--- 344 (393)
T cd08246 269 ARRFGKAIWDILGGRED-PDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAND--- 344 (393)
T ss_pred cchHHHHHHHHhCCCCC-CeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcH---
Confidence 235577788876 5 99999999987778999999999999999865443334444556667778877654321
Q ss_pred cCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhcc-CCCCCceEe
Q 021311 260 EKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGL-HGSQPKQVI 312 (314)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~-~~~~~k~vi 312 (314)
+.+..++++++++.+.+. ++.|++++++++++.+.++ +..+ |+++
T Consensus 345 -------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~g-kvvv 391 (393)
T cd08246 345 -------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVG-NMAV 391 (393)
T ss_pred -------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccc-eEEE
Confidence 457788999999998864 5689999999999999988 6777 8876
No 46
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.4e-39 Score=284.65 Aligned_cols=300 Identities=22% Similarity=0.278 Sum_probs=242.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--CCCCcc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--PSSGTW 79 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~--~~~g~~ 79 (314)
+|+|.|+|+++||+|||.++++|+.|.....+..+. ..+|.++|+|++|+|+++|++++.|++||+|+++. ...|+|
T Consensus 20 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~ 98 (336)
T TIGR02817 20 IDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSN 98 (336)
T ss_pred cccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcc
Confidence 578899999999999999999999999888776543 25688999999999999999999999999999874 225899
Q ss_pred cceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCC-----CCEEEEcCCCcHHHHHHHHHHHHc-CCcEE
Q 021311 80 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGATSIVGQCIIQIARHR-GIHSI 153 (314)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~g~~g~~G~~a~~la~~~-g~~vi 153 (314)
++|++++++.++++|+++++++++.+++++.|||+++....++++ +++|||+|++|++|++++|+|+.+ |++++
T Consensus 99 ~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi 178 (336)
T TIGR02817 99 AEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVI 178 (336)
T ss_pred cceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999999999999988788887 999999999999999999999998 99999
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC-ccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
++++ ++++.+.++++|+++++++.....+.+++. .+.+ +|+++||.++ ......+++++++|+++.++..
T Consensus 179 ~~~~----~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~-vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~--- 249 (336)
T TIGR02817 179 ATAS----RPESQEWVLELGAHHVIDHSKPLKAQLEKL-GLEA-VSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP--- 249 (336)
T ss_pred EEcC----cHHHHHHHHHcCCCEEEECCCCHHHHHHHh-cCCC-CCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---
Confidence 9884 677888889999999998665444566663 3344 9999999865 5568999999999999988522
Q ss_pred CcccccccceecceEEEEEechhhccccCHHHH--HHHHHHHHHHHHcCCcccc-ceee---ccccHHHHHHHHhccCCC
Q 021311 233 PITVSTSAFIFKDLSLKGFWLQKWLSSEKATEC--RNMIDYLLCLAREGKLKYD-MELV---PFNNFQTALSKALGLHGS 306 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~-~~~~---~~~~~~~a~~~~~~~~~~ 306 (314)
..++...+..+++++.+..+........+... +..++.+++++.++.+++. ++.+ +++++++|++.+.+++..
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 328 (336)
T TIGR02817 250 -AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKAR 328 (336)
T ss_pred -ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCcc
Confidence 22333334445566665433211011112222 3678999999999998864 3344 578999999999999888
Q ss_pred CCceEee
Q 021311 307 QPKQVIK 313 (314)
Q Consensus 307 ~~k~vi~ 313 (314)
+ |++++
T Consensus 329 g-kvvv~ 334 (336)
T TIGR02817 329 G-KIVLE 334 (336)
T ss_pred c-eEEEe
Confidence 7 98874
No 47
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=7.6e-39 Score=278.58 Aligned_cols=301 Identities=22% Similarity=0.260 Sum_probs=252.4
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-CCCcc
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-SSGTW 79 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~~g~~ 79 (314)
+.+.|.+.+++|+|++.++++|+.|+....|..+. .+.+|..+|||++|+|+++|+++..+++||+|++... ..|+|
T Consensus 19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~ 98 (324)
T cd08244 19 DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGY 98 (324)
T ss_pred ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCCCCcee
Confidence 45556688999999999999999999988876532 2356788999999999999999999999999999741 14899
Q ss_pred cceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 80 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
++|+.++.+.++++|+++++++++.+++.+.||| ++...++++++++++|+|++|.+|++++++|+..|++++.+++
T Consensus 99 ~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~-- 175 (324)
T cd08244 99 AELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAG-- 175 (324)
T ss_pred eEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC--
Confidence 9999999999999999999999999999999995 5556689999999999999999999999999999999888874
Q ss_pred CCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccc
Q 021311 160 AGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST 238 (314)
Q Consensus 160 ~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 238 (314)
++++.+.++.+|+++++++.+.. .+.+.+.+++++ +|+++||+|+.....++++++++|+++.+|........++.
T Consensus 176 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~ 252 (324)
T cd08244 176 --GPAKTALVRALGADVAVDYTRPDWPDQVREALGGGG-VTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDE 252 (324)
T ss_pred --CHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC-ceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCH
Confidence 67778888899999888877643 466777777665 99999999998888999999999999999965444334444
Q ss_pred ccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 239 SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
...+.+++++.++..... .+....+.++.+++++.++.+.+. +..|+++++.++++.+.+++..+ |+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~~~ 324 (324)
T cd08244 253 DDARRRGVTVVGLLGVQA----ERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVG-KVLLLP 324 (324)
T ss_pred HHHhhCCcEEEEeecccC----CHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence 455678899888776432 234556788899999999998754 46799999999999999988887 999875
No 48
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.6e-40 Score=283.25 Aligned_cols=304 Identities=28% Similarity=0.379 Sum_probs=237.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCC---CCCccCCcce---EEEEEEec-CCCCCCCCCCEEeeCCC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---KVPAVGGYEG---VGEVYSVG-SAVTRLAPGDWVIPSPP 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~---~~p~~~G~e~---~G~V~~~G-~~v~~~~~Gd~V~~~~~ 74 (314)
++.++|+|.+++++|++.++++|+.|+.+..|.+...+ .+|.++++++ +|.+...| ..+..+..||.+.....
T Consensus 23 ~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 102 (347)
T KOG1198|consen 23 EEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFLS 102 (347)
T ss_pred ecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeeccC
Confidence 57899999999999999999999999999999887766 6775555444 45555556 34455888888887776
Q ss_pred CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhh------cCCCCCEEEEcCCCcHHHHHHHHHHHHc
Q 021311 75 SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT------TLNSGDSIVQNGATSIVGQCIIQIARHR 148 (314)
Q Consensus 75 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlI~g~~g~~G~~a~~la~~~ 148 (314)
.|+|+||.++|+..++++|++++++++|++|.++.|||.++.+.+ +.++|++|||+|++|++|++++|+|+..
T Consensus 103 -~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~ 181 (347)
T KOG1198|consen 103 -SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHA 181 (347)
T ss_pred -CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhc
Confidence 699999999999999999999999999999999999999999988 8999999999999999999999999999
Q ss_pred CCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEc
Q 021311 149 GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 149 g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g 227 (314)
++..++++. ++++.++++++|+++++||++.+. +++++.+ +. +||+||||+|+......+.++..+|+...++
T Consensus 182 ~~~~v~t~~----s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~-~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~ 255 (347)
T KOG1198|consen 182 GAIKVVTAC----SKEKLELVKKLGADEVVDYKDENVVELIKKYT-GK-GVDVVLDCVGGSTLTKSLSCLLKGGGGAYIG 255 (347)
T ss_pred CCcEEEEEc----ccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CC-CccEEEECCCCCccccchhhhccCCceEEEE
Confidence 954444442 789999999999999999998765 5677777 44 4999999999998888888888888655555
Q ss_pred CCCCCCcccccccce--ecceEEEE--EechhhccccCHHHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHhc
Q 021311 228 GMSKKPITVSTSAFI--FKDLSLKG--FWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALG 302 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~a~~~~~~ 302 (314)
.......+....... .+.+.+.. .+...+ .........+.++.+.+++++|++++.++ .||++++.+||+.+.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~ 334 (347)
T KOG1198|consen 256 LVGDELANYKLDDLWQSANGIKLYSLGLKGVNY-RWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEK 334 (347)
T ss_pred eccccccccccccchhhhhhhhheeeeeeccce-eeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhh
Confidence 333222111111000 11111111 111110 00112233467899999999999999875 7999999999999999
Q ss_pred cCCCCCceEeeC
Q 021311 303 LHGSQPKQVIKF 314 (314)
Q Consensus 303 ~~~~~~k~vi~~ 314 (314)
+...| |+++.+
T Consensus 335 ~~~~G-K~vl~~ 345 (347)
T KOG1198|consen 335 SHATG-KVVLEK 345 (347)
T ss_pred cCCcc-eEEEEe
Confidence 88888 999864
No 49
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-39 Score=280.75 Aligned_cols=305 Identities=26% Similarity=0.292 Sum_probs=254.6
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.+.|++.++||+|||.++++|+.|.....+.++..+..|.++|||++|+|+++|+++..+++||+|+++.. .|+|++|
T Consensus 20 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-~g~~~~~ 98 (334)
T PTZ00354 20 ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLP-GGGYAEY 98 (334)
T ss_pred eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecC-CCceeeE
Confidence 556677899999999999999999999888866544456779999999999999999999999999999853 4899999
Q ss_pred EeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc
Q 021311 83 VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162 (314)
Q Consensus 83 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~ 162 (314)
++++.+.++++|+++++.+++.++.++.+||+++.+.+.++++++++|+|++|.+|++++++|+..|++++++++ +
T Consensus 99 ~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~----~ 174 (334)
T PTZ00354 99 AVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS----S 174 (334)
T ss_pred EEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----C
Confidence 999999999999999999999999999999999988889999999999999999999999999999999887663 6
Q ss_pred HHHHHHHHhCCCcEEEecChh--hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcc-cccc
Q 021311 163 DEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPIT-VSTS 239 (314)
Q Consensus 163 ~~~~~~~~~lg~~~~~~~~~~--~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~ 239 (314)
+++.+.++++|.+++++.... ..+.++..+++.+ +|++|||.++.....++++++++|+++.+|........ +...
T Consensus 175 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~ 253 (334)
T PTZ00354 175 EEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKG-VNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLL 253 (334)
T ss_pred HHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcccccCHH
Confidence 788888888999989987653 4466777777666 99999999988888999999999999999854443322 4445
Q ss_pred cceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 240 AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++.+..++.+...........+....+.++.+++++.++.+.+. ++.+++++++++++.+.+++..+ |+|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-kvvv~~ 328 (334)
T PTZ00354 254 PLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIG-KVVLTV 328 (334)
T ss_pred HHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCc-eEEEec
Confidence 555677788887654322212234445667889999999998864 56799999999999999887776 999864
No 50
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=8.5e-39 Score=278.39 Aligned_cols=300 Identities=21% Similarity=0.264 Sum_probs=245.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-----CCC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-----PSS 76 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-----~~~ 76 (314)
+++|.|.+++++|+|++.++++|++|+....|.++..+.+|..+|||++|+|+++ +++.+++||+|++.. ...
T Consensus 18 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~ 95 (325)
T cd05280 18 RTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTD 95 (325)
T ss_pred EeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccccCCCCC
Confidence 5778899999999999999999999999998876544456889999999999998 467899999999863 115
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcC--C-CCCEEEEcCCCcHHHHHHHHHHHHcCCcEE
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL--N-SGDSIVQNGATSIVGQCIIQIARHRGIHSI 153 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~~~~vlI~g~~g~~G~~a~~la~~~g~~vi 153 (314)
|+|++|+.++++.++++|+++++++++.+++.+.+||+++....+. . .+++|+|+|++|.+|++++++|+.+|++++
T Consensus 96 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~ 175 (325)
T cd05280 96 GGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVV 175 (325)
T ss_pred ceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEE
Confidence 8999999999999999999999999999999999999998765433 5 357999999999999999999999999988
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP 233 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 233 (314)
++++ ++++++.++++|++++++..+.. ..+.....+.+ +|+++||.++.....++++++++|+++.+|.....+
T Consensus 176 ~~~~----~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~ 249 (325)
T cd05280 176 ALTG----KEEQADYLKSLGASEVLDREDLL-DESKKPLLKAR-WAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPE 249 (325)
T ss_pred EEeC----CHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCC-ccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCc
Confidence 7774 67888899999999998876532 23334444444 999999999988899999999999999999654433
Q ss_pred cccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 234 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
..+.+..++.+++++.+...... .+....+.++.+.+++..+...+.+..|++++++++++.+.+++..| |+|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g-k~vv~ 324 (325)
T cd05280 250 LTTTVLPFILRGVSLLGIDSVNC----PMELRKQVWQKLATEWKPDLLEIVVREISLEELPEAIDRLLAGKHRG-RTVVK 324 (325)
T ss_pred cccccchheeeeeEEEEEEeecC----chhHHHHHHHHHHHHHhcCCccceeeEecHHHHHHHHHHHhcCCcce-EEEEe
Confidence 34445555578899888765432 12344466777778778885555567899999999999999998887 99987
Q ss_pred C
Q 021311 314 F 314 (314)
Q Consensus 314 ~ 314 (314)
+
T Consensus 325 ~ 325 (325)
T cd05280 325 I 325 (325)
T ss_pred C
Confidence 4
No 51
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=4.7e-39 Score=280.26 Aligned_cols=304 Identities=23% Similarity=0.264 Sum_probs=248.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
++++.|+|+++||+||+.++|+|++|+....+.++. +.+|..+|||++|+|+.+|+.++.+++||+|++.....|+|++
T Consensus 19 ~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~ 97 (327)
T PRK10754 19 VEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSS 97 (327)
T ss_pred eeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCCCCcceee
Confidence 567888899999999999999999999988887653 2468899999999999999999999999999876433589999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|+.++.+.++++|+++++++++.++..+.+||+++....++++|++++|+|++|.+|++++++|+.+|++++.+++
T Consensus 98 ~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~---- 173 (327)
T PRK10754 98 VHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---- 173 (327)
T ss_pred EEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeC----
Confidence 9999999999999999999999999999999999988888999999999998899999999999999999988874
Q ss_pred cHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccccc
Q 021311 162 SDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSA 240 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 240 (314)
++++++.++++|++++++.++.. .+.++..+++.+ +|+++||+++......+++++++|+++.+|........+....
T Consensus 174 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 252 (327)
T PRK10754 174 SAQKAQRAKKAGAWQVINYREENIVERVKEITGGKK-VRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGI 252 (327)
T ss_pred CHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCC-eEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHH
Confidence 67788888999999998876543 456788887766 9999999998877889999999999999985542212222222
Q ss_pred ceecceEE-EEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 241 FIFKDLSL-KGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+..++..+ ........ ...+....+.+..+++++.+|.+++. ++.|+++++.++++.+.+++..+ |+|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~ 327 (327)
T PRK10754 253 LNQKGSLYVTRPSLQGY--ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQG-SSLLIP 327 (327)
T ss_pred HhccCceEEecceeecc--cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcc-eEEEeC
Confidence 22222111 11111111 12345566778889999999999853 57899999999999999988887 999863
No 52
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.4e-39 Score=280.57 Aligned_cols=296 Identities=27% Similarity=0.378 Sum_probs=250.1
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++++.|.|.+++|+||+.++++|+.|.....+.++.....|..+|||++|+|+++|++++.+++||+|++.+.
T Consensus 17 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~ 96 (341)
T cd08297 17 KDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKC 96 (341)
T ss_pred EEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCC
Confidence 5677888999999999999999999999988876544456778999999999999999999999999987520
Q ss_pred --------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
..|+|++|+.++.+.++++|+++++.+++.++..+.|||+++.. .++++++++||+|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~ 175 (341)
T cd08297 97 EYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAG 175 (341)
T ss_pred ccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCC
Confidence 15899999999999999999999999999999999999999977 589999999999998
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCC-ccHHH
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASK 212 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~ 212 (314)
+.+|++++++|+.+|++++.+++ ++++.+.++++|++.++++++. ..+.+.+++++.+ +|+++||.++ .....
T Consensus 176 ~~vg~~~~~~a~~~g~~v~~~~~----~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~-vd~vl~~~~~~~~~~~ 250 (341)
T cd08297 176 GGLGHLGVQYAKAMGLRVIAIDV----GDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGG-AHAVVVTAVSAAAYEQ 250 (341)
T ss_pred chHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCC-CCEEEEcCCchHHHHH
Confidence 88999999999999999988884 6778888889999999988764 4466877776665 9999997765 55688
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeecccc
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNN 292 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 292 (314)
++++++++|+++.+|.......++.....+.+++++.+..+.. .+.++.+++++.++.+.+.++.|++++
T Consensus 251 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~ 320 (341)
T cd08297 251 ALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT----------RQDLQEALEFAARGKVKPHIQVVPLED 320 (341)
T ss_pred HHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC----------HHHHHHHHHHHHcCCCcceeEEEcHHH
Confidence 9999999999999985543323444444556888888754321 356788999999999987777899999
Q ss_pred HHHHHHHHhccCCCCCceEeeC
Q 021311 293 FQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 293 ~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++++++.+..++..+ |++++|
T Consensus 321 ~~~a~~~~~~~~~~g-kvvi~~ 341 (341)
T cd08297 321 LNEVFEKMEEGKIAG-RVVVDF 341 (341)
T ss_pred HHHHHHHHHcCCccc-eEEEeC
Confidence 999999999988887 999876
No 53
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-39 Score=282.85 Aligned_cols=297 Identities=22% Similarity=0.233 Sum_probs=239.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++.+.|.+.++||+|||.++++|++|++...+.++. ..+|.++|||++|+|+++|+.++++++||+|++.+.
T Consensus 15 ~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~ 93 (351)
T cd08285 15 IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSV 93 (351)
T ss_pred EECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCH
Confidence 467888899999999999999999999988876543 256899999999999999999999999999998431
Q ss_pred ----------------------CCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEE
Q 021311 75 ----------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 130 (314)
Q Consensus 75 ----------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 130 (314)
..|+|++|+.++.+ .++++|+++++++++.++..+.|||+++ ..++++++++|||
T Consensus 94 ~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI 172 (351)
T cd08285 94 AAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAV 172 (351)
T ss_pred HHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEE
Confidence 25899999999974 8999999999999999999999999996 5588999999999
Q ss_pred cCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCc-
Q 021311 131 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN- 208 (314)
Q Consensus 131 ~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~- 208 (314)
+|+ |++|++++|+|+..|+..+++++. ++++.+.++++|+++++++.+. ..+++..++.+++ +|+++||+|+.
T Consensus 173 ~g~-g~iG~~~~~lak~~G~~~v~~~~~---~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~-~d~vld~~g~~~ 247 (351)
T cd08285 173 FGI-GPVGLMAVAGARLRGAGRIIAVGS---RPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKG-VDAVIIAGGGQD 247 (351)
T ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCC-CcEEEECCCCHH
Confidence 975 999999999999999975555543 6778889999999999988754 3466777776665 99999999975
Q ss_pred cHHHHHHhcccCCEEEEEcCCCCC-Cccccc--ccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc--
Q 021311 209 SASKVLKFLSQGGTMVTYGGMSKK-PITVST--SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY-- 283 (314)
Q Consensus 209 ~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-- 283 (314)
.+..++++++++|+++.+|..... ...++. .....+..++.+.+... ..+.++++++++++|++++
T Consensus 248 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~g~i~~~~ 318 (351)
T cd08285 248 TFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG---------GRLRMERLASLIEYGRVDPSK 318 (351)
T ss_pred HHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC---------ccccHHHHHHHHHcCCCChhh
Confidence 558999999999999999865432 222221 11223445555432211 1245788999999999998
Q ss_pred -cce-eeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 284 -DME-LVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 284 -~~~-~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++ .++++++++|++.+.+++....|++|++
T Consensus 319 ~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 319 LLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 244 5999999999999999876434999875
No 54
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.2e-38 Score=277.30 Aligned_cols=300 Identities=22% Similarity=0.249 Sum_probs=245.3
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----C
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-----S 75 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-----~ 75 (314)
++++|.|.+++++|+||+.++++|+.|+....|.++....+|..+|||++|+|+. +++..|++||+|+++.. .
T Consensus 16 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~ 93 (323)
T TIGR02823 16 VETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSH 93 (323)
T ss_pred EeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCCCCCC
Confidence 4688999999999999999999999999988887643335688999999999998 56778999999998741 2
Q ss_pred CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHh--hcCCCCC-EEEEcCCCcHHHHHHHHHHHHcCCcE
Q 021311 76 SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGD-SIVQNGATSIVGQCIIQIARHRGIHS 152 (314)
Q Consensus 76 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~vlI~g~~g~~G~~a~~la~~~g~~v 152 (314)
.|+|++|+.++.+.++++|+++++++++.++..+.+||+++... +++.+++ +++|+|++|.+|++++++|+.+|+++
T Consensus 94 ~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~v 173 (323)
T TIGR02823 94 DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEV 173 (323)
T ss_pred CccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeE
Confidence 58999999999999999999999999999999999999887543 3488898 99999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 153 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 153 i~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
+++++ ++++++.++++|++.+++.++... .++.+..+ ++|+++||+|+.....++++++++|+++.+|.....
T Consensus 174 i~~~~----~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 246 (323)
T TIGR02823 174 VASTG----KAEEEDYLKELGASEVIDREDLSP-PGKPLEKE--RWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP 246 (323)
T ss_pred EEEeC----CHHHHHHHHhcCCcEEEccccHHH-HHHHhcCC--CceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC
Confidence 88874 567778889999988888765332 34444443 499999999998888999999999999999965443
Q ss_pred CcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 233 PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
..+.....++.+++++.+.+.... ........++.+.+++..+.+.+.++.++++++++||+.+.+++..+ |+|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~-k~vv 321 (323)
T TIGR02823 247 DLPTTVLPFILRGVSLLGIDSVYC----PMALREAAWQRLATDLKPRNLESITREITLEELPEALEQILAGQHRG-RTVV 321 (323)
T ss_pred CccccHHHHhhcceEEEEEecccc----CchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHHHHHHhCCCccc-eEEE
Confidence 333433455578899988765322 11233456777788888898876677899999999999999998887 9998
Q ss_pred eC
Q 021311 313 KF 314 (314)
Q Consensus 313 ~~ 314 (314)
++
T Consensus 322 ~~ 323 (323)
T TIGR02823 322 DV 323 (323)
T ss_pred eC
Confidence 64
No 55
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.2e-39 Score=283.04 Aligned_cols=295 Identities=25% Similarity=0.334 Sum_probs=244.5
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------- 73 (314)
++.+.|++.++||+|||.++++|++|+....+.++. .+|.++|||++|+|+++|+++..+++||+|++..
T Consensus 18 ~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 95 (365)
T cd08278 18 EDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECAN 95 (365)
T ss_pred EEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCChH
Confidence 577888999999999999999999999999887652 4688999999999999999999999999999521
Q ss_pred ----------------------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHH
Q 021311 74 ----------------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113 (314)
Q Consensus 74 ----------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 113 (314)
...|+|++|+.++++.++++|++++++.++.+++++.|||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~ 175 (365)
T cd08278 96 CLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGA 175 (365)
T ss_pred HhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhh
Confidence 0148899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHh
Q 021311 114 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLL 192 (314)
Q Consensus 114 ~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~ 192 (314)
+++.....++++++|||+|+ |++|++++++|+..|++++++++. ++++.+.++++|++.++++++. ..+.+++.+
T Consensus 176 ~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~---~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~ 251 (365)
T cd08278 176 GAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDI---VDSRLELAKELGATHVINPKEEDLVAAIREIT 251 (365)
T ss_pred HHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHcCCcEEecCCCcCHHHHHHHHh
Confidence 99988889999999999976 999999999999999975555543 6788888899999999988764 346677777
Q ss_pred cCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCC-CCCcccccccceecceEEEEEechhhccccCHHHHHHHHH
Q 021311 193 ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMID 270 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (314)
+.+ +|+++||+|.. .+..++++++++|+++.+|... .....++...++.+++++.++..... .+ .+.++
T Consensus 252 -~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~ 322 (365)
T cd08278 252 -GGG-VDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS----VP---QEFIP 322 (365)
T ss_pred -CCC-CcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc----Ch---HHHHH
Confidence 555 99999999874 4589999999999999999653 22334555555578888888765321 11 35678
Q ss_pred HHHHHHHcCCccc--cceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 271 YLLCLAREGKLKY--DMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 271 ~~~~~l~~g~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.+++++.++++.+ .+..+++++++++++.+.+++.. |+||+
T Consensus 323 ~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~--k~~~~ 365 (365)
T cd08278 323 RLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI--KPVLR 365 (365)
T ss_pred HHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce--EEEEC
Confidence 8899999999865 24679999999999999886643 88874
No 56
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=9.8e-39 Score=283.58 Aligned_cols=296 Identities=22% Similarity=0.222 Sum_probs=243.1
Q ss_pred CccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----
Q 021311 1 MIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----- 74 (314)
Q Consensus 1 i~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----- 74 (314)
+++++.|.| ++++|+||+.++++|++|+..+.|.++.. ++|.++|||++|+|+++|+++.++++||+|++...
T Consensus 14 ~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~ 92 (386)
T cd08283 14 VEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGE 92 (386)
T ss_pred EEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCC
Confidence 356788888 49999999999999999999999987653 56889999999999999999999999999988531
Q ss_pred -----------------------------------------CCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHH
Q 021311 75 -----------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT 111 (314)
Q Consensus 75 -----------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~t 111 (314)
..|+|++|++++.+ .++++|+++++++++.++..+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 172 (386)
T cd08283 93 CFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPT 172 (386)
T ss_pred ChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhh
Confidence 14889999999987 89999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh--hHHHH
Q 021311 112 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNV 188 (314)
Q Consensus 112 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~i 188 (314)
||+++ ..++++++++|||+|+ |.+|++++++|+..|+. ++++.. ++++.+.+++++...++++.+. ..+.+
T Consensus 173 a~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~----~~~~~~~~~~~~~~~vi~~~~~~~~~~~l 246 (386)
T cd08283 173 GYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDR----VPERLEMARSHLGAETINFEEVDDVVEAL 246 (386)
T ss_pred hHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC----CHHHHHHHHHcCCcEEEcCCcchHHHHHH
Confidence 99999 6789999999999976 99999999999999985 655553 6888889988844467776653 44667
Q ss_pred HHHhcCCCCCcEEEecCCCc----------------------cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecce
Q 021311 189 KGLLANLPEPALGFNCVGGN----------------------SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDL 246 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 246 (314)
+.++.+.+ +|++|||+|++ ....++++++++|+++.+|........+.....+.+++
T Consensus 247 ~~~~~~~~-~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 325 (386)
T cd08283 247 RELTGGRG-PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGL 325 (386)
T ss_pred HHHcCCCC-CCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCc
Confidence 77777666 99999999864 34788999999999999986544333344445567888
Q ss_pred EEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 247 SLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++.+.... ..+.++.+++++.++++.+. ++.|+++++++|++.+.+++...+|+||++
T Consensus 326 ~i~~~~~~----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 326 TLRMGQTH----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred EEEeccCC----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 88886321 23567888999999999863 467999999999999998875545999874
No 57
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.5e-38 Score=276.61 Aligned_cols=288 Identities=24% Similarity=0.299 Sum_probs=242.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeC---------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS--------- 72 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~--------- 72 (314)
++++.|+|+++||+||+.++++|++|++...+.+.. ..+|..+|||++|+|+++|+.++.|++||+|+..
T Consensus 15 ~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (337)
T cd05283 15 FTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTC 93 (337)
T ss_pred EeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCC
Confidence 578899999999999999999999999999887643 3568999999999999999999999999999731
Q ss_pred -------------------------CCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCE
Q 021311 73 -------------------------PPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS 127 (314)
Q Consensus 73 -------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 127 (314)
....|+|++|+.++.+.++++|+++++++++.+.+.+.+||+++.+ ..++++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~ 172 (337)
T cd05283 94 EQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGKR 172 (337)
T ss_pred ccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCCE
Confidence 0225899999999999999999999999999999999999999977 56899999
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
++|.|+ |.+|++++++|+..|++++++.+ ++++.+.++.+|++.+++.++... .+. . +. ++|++|||++.
T Consensus 173 vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~----~~~~~~~~~~~g~~~vi~~~~~~~--~~~-~-~~-~~d~v~~~~g~ 242 (337)
T cd05283 173 VGVVGI-GGLGHLAVKFAKALGAEVTAFSR----SPSKKEDALKLGADEFIATKDPEA--MKK-A-AG-SLDLIIDTVSA 242 (337)
T ss_pred EEEECC-cHHHHHHHHHHHHcCCeEEEEcC----CHHHHHHHHHcCCcEEecCcchhh--hhh-c-cC-CceEEEECCCC
Confidence 999875 99999999999999998887774 667788888999999888765432 111 1 23 49999999998
Q ss_pred cc-HHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccce
Q 021311 208 NS-ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDME 286 (314)
Q Consensus 208 ~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 286 (314)
.. ...++++++++|+++.+|..... ..+++..++.+++++.+..... .+.++.+++++.++++++.++
T Consensus 243 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~ 311 (337)
T cd05283 243 SHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIGG----------RKETQEMLDFAAEHGIKPWVE 311 (337)
T ss_pred cchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEecccC----------HHHHHHHHHHHHhCCCccceE
Confidence 75 68899999999999999865332 2445555567899999876542 145778889999999988778
Q ss_pred eeccccHHHHHHHHhccCCCCCceEee
Q 021311 287 LVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 287 ~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.++++++++||+.+.+++..| |+|++
T Consensus 312 ~~~~~~~~~a~~~~~~~~~~~-k~v~~ 337 (337)
T cd05283 312 VIPMDGINEALERLEKGDVRY-RFVLD 337 (337)
T ss_pred EEEHHHHHHHHHHHHcCCCcc-eEeeC
Confidence 899999999999999998887 98874
No 58
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.4e-38 Score=274.36 Aligned_cols=296 Identities=27% Similarity=0.352 Sum_probs=245.9
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCccc
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 80 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~ 80 (314)
+++++.|.+.++||+|||.++++|+.|+....|.++..+.+|.++|+|++|+|+.+|+.++.+++||+|+++. .|+|+
T Consensus 20 ~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~--~g~~~ 97 (329)
T cd08250 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS--FGAFA 97 (329)
T ss_pred EEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec--Cccee
Confidence 3577888899999999999999999999988887654346788999999999999999999999999999986 58999
Q ss_pred ceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 81 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 81 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
+|+.++.+.++++|++ +.+++.++.++.|||+++.+..+++++++++|+|++|.+|++++++|+..|++++.+++
T Consensus 98 s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~--- 172 (329)
T cd08250 98 EYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCS--- 172 (329)
T ss_pred EEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeC---
Confidence 9999999999999997 35677888899999999988788999999999999999999999999999999988874
Q ss_pred CcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC------
Q 021311 161 GSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP------ 233 (314)
Q Consensus 161 ~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~------ 233 (314)
++++.+.++.+|++.+++.++... +.+....+ .+ +|++|||.|+......+++++++|+++.+|......
T Consensus 173 -~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~-vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 249 (329)
T cd08250 173 -SDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KG-VDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPS 249 (329)
T ss_pred -cHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CC-CeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccc
Confidence 667788888899988887765433 44555443 44 999999999877789999999999999998654321
Q ss_pred ----cccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCC
Q 021311 234 ----ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGS 306 (314)
Q Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~ 306 (314)
..+ ....+.+++++.++....+. ....+.+.++++++.++.+.+. ++.++++++++|++.+.+++..
T Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 323 (329)
T cd08250 250 PVKGATL-PPKLLAKSASVRGFFLPHYA-----KLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNI 323 (329)
T ss_pred ccccccc-cHHHhhcCceEEEEEhHHHH-----HHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCC
Confidence 111 23446788999988764431 2245678889999999998873 3459999999999999988777
Q ss_pred CCceEee
Q 021311 307 QPKQVIK 313 (314)
Q Consensus 307 ~~k~vi~ 313 (314)
+ |++++
T Consensus 324 ~-kvvv~ 329 (329)
T cd08250 324 G-KVVVE 329 (329)
T ss_pred c-eEEeC
Confidence 6 98874
No 59
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.6e-38 Score=278.60 Aligned_cols=294 Identities=22% Similarity=0.273 Sum_probs=236.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
+++|.|++.++||+|||.++++|++|.+...|.++. .+|.++|||++|+|+++|++++.+++||+|+++..
T Consensus 23 ~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~ 100 (373)
T cd08299 23 EEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCR 100 (373)
T ss_pred EEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCCh
Confidence 578889999999999999999999999999887632 46889999999999999999999999999987620
Q ss_pred ----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHH
Q 021311 75 ----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 114 (314)
Q Consensus 75 ----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 114 (314)
..|+|+||++++.+.++++|+++++++++++++++.+||+
T Consensus 101 ~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~ 180 (373)
T cd08299 101 ACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYG 180 (373)
T ss_pred hhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHH
Confidence 1488999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHHHHH
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVKG 190 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~i~~ 190 (314)
++.+.++++++++|+|+|+ |++|++++++|+..|+ +++++.+ ++++++.++++|++++++..+. ..+.+++
T Consensus 181 ~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~----~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~ 255 (373)
T cd08299 181 AAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDI----NKDKFAKAKELGATECINPQDYKKPIQEVLTE 255 (373)
T ss_pred HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC----CHHHHHHHHHcCCceEecccccchhHHHHHHH
Confidence 9888889999999999976 9999999999999999 5766653 6788899999999999987643 3355666
Q ss_pred HhcCCCCCcEEEecCCCcc-HHHHHHh-cccCCEEEEEcCCCCC-CcccccccceecceEEEEEechhhccccCHHHHHH
Q 021311 191 LLANLPEPALGFNCVGGNS-ASKVLKF-LSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 267 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~~-~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
++. . ++|+++||+|++. ...++.. ++++|+++.+|..... ..++.+.. +.++.++.+++...+.. ++
T Consensus 256 ~~~-~-~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~-------~~ 325 (373)
T cd08299 256 MTD-G-GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVFGGWKS-------KD 325 (373)
T ss_pred HhC-C-CCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-HhcCCeEEEEEecCCcc-------HH
Confidence 666 3 4999999999754 4665665 4689999999965432 23333322 34678888887655421 13
Q ss_pred HHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 268 MIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.+.++++.+.++.+++. ++.|+++++.+||+.+.+.+. .|+++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~--~k~~~~~ 373 (373)
T cd08299 326 SVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS--IRTVLTF 373 (373)
T ss_pred HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc--ceEEEeC
Confidence 34556666777765542 568999999999999887653 3888864
No 60
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.4e-38 Score=278.32 Aligned_cols=294 Identities=23% Similarity=0.342 Sum_probs=242.5
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++++.|.+++++|+|++.++++|+.|++...+.++. .+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 16 ~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~ 93 (365)
T cd05279 16 EEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCK 93 (365)
T ss_pred EEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCCh
Confidence 577889999999999999999999999998887643 45789999999999999999999999999998631
Q ss_pred ----------------------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHH
Q 021311 75 ----------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR 114 (314)
Q Consensus 75 ----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~ 114 (314)
..|+|++|+.++++.++++|+++++++++.+..++.+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~ 173 (365)
T cd05279 94 QCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYG 173 (365)
T ss_pred hhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHH
Confidence 1368999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh---hHHHHHHH
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVKGL 191 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~i~~~ 191 (314)
++.+.+++++|++|||+|+ |++|++++++|+.+|++++++++. ++++.+.++++|++++++.++. ..+.++++
T Consensus 174 al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~---~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~ 249 (365)
T cd05279 174 AAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDI---NKDKFEKAKQLGATECINPRDQDKPIVEVLTEM 249 (365)
T ss_pred HHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCeecccccccchHHHHHHHH
Confidence 9888889999999999976 999999999999999986655543 7788888899999999987654 33557777
Q ss_pred hcCCCCCcEEEecCCC-ccHHHHHHhcc-cCCEEEEEcCCC-CCCcccccccceecceEEEEEechhhccccCHHHHHHH
Q 021311 192 LANLPEPALGFNCVGG-NSASKVLKFLS-QGGTMVTYGGMS-KKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNM 268 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (314)
++ . ++|+++|++|. .....++++++ ++|+++.+|... ....++....+ .++.++.|.++..+. ..+.
T Consensus 250 ~~-~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~-------~~~~ 319 (365)
T cd05279 250 TD-G-GVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWK-------SKDS 319 (365)
T ss_pred hC-C-CCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCc-------hHhH
Confidence 74 4 49999999986 55688999999 999999998543 23344444445 577788887654331 2356
Q ss_pred HHHHHHHHHcCCccc---cceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 269 IDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 269 ~~~~~~~l~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+..+++++.++.+.+ .++.++++++++||+.+.+++.. |++++
T Consensus 320 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~--~~~~~ 365 (365)
T cd05279 320 VPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI--RTILT 365 (365)
T ss_pred HHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce--eeeeC
Confidence 778889999999875 35779999999999999876543 77663
No 61
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=3.6e-38 Score=277.14 Aligned_cols=295 Identities=24% Similarity=0.305 Sum_probs=243.2
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC-----------CCCCCccCCcceEEEEEEecCCCCCCCCCCEE
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 69 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V 69 (314)
++++|.|++.++||+|++.++++|++|+..+.+.++. ...+|..+|+|++|+|+++|++++.+++||+|
T Consensus 15 ~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 94 (350)
T cd08240 15 EVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKV 94 (350)
T ss_pred EEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEE
Confidence 3578889999999999999999999999998876542 22457889999999999999999999999999
Q ss_pred eeCCC--------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCC
Q 021311 70 IPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN 123 (314)
Q Consensus 70 ~~~~~--------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 123 (314)
++++. ..|+|++|+.++.+.++++|+++++.+++++.+.+.|||+++.+...+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~ 174 (350)
T cd08240 95 LVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLV 174 (350)
T ss_pred EECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCC
Confidence 98731 2589999999999999999999999999999999999999998877777
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v 201 (314)
++++|+|+|+ |++|++++|+|+..|++ ++++. .++++.+.++++|++.++++++.. .+.+.+..++ + +|++
T Consensus 175 ~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-~d~v 247 (350)
T cd08240 175 ADEPVVIIGA-GGLGLMALALLKALGPANIIVVD----IDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGG-G-VDAV 247 (350)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCC-C-CcEE
Confidence 8999999975 99999999999999995 55554 267888888999998888876543 3567776666 4 9999
Q ss_pred EecCCC-ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCC
Q 021311 202 FNCVGG-NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGK 280 (314)
Q Consensus 202 ~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 280 (314)
||++|. .....++++|+++|+++.+|..... ..+.......+++++.+.+.... +.+..++++++++.
T Consensus 248 id~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~ll~~~~ 316 (350)
T cd08240 248 IDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL----------EELRELVALAKAGK 316 (350)
T ss_pred EECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH----------HHHHHHHHHHHcCC
Confidence 999986 4568999999999999999865432 22222233447888887655321 45778889999999
Q ss_pred cccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 281 LKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 281 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++. +..+++++++++++.+.+++..+ |+++++
T Consensus 317 i~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~ 350 (350)
T cd08240 317 LKPIPLTERPLSDVNDALDDLKAGKVVG-RAVLKP 350 (350)
T ss_pred CccceeeEEcHHHHHHHHHHHHcCCccc-eEEecC
Confidence 8764 56799999999999999988887 998864
No 62
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3.4e-38 Score=277.06 Aligned_cols=294 Identities=25% Similarity=0.272 Sum_probs=240.6
Q ss_pred ccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 2 IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 2 ~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
.++|.|.| .+++|+||+.++++|+.|+....+.++. .++|.++|+|++|+|+++|++++++++||+|++..
T Consensus 15 ~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~ 93 (347)
T cd05278 15 EEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRC 93 (347)
T ss_pred EEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCC
Confidence 46788888 8999999999999999999999887764 36689999999999999999999999999999731
Q ss_pred ----------------------CCCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEE
Q 021311 74 ----------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIV 129 (314)
Q Consensus 74 ----------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vl 129 (314)
...|+|++|++++++ .++++|+++++++++.++.++.|||+++ ...+++++++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~Vl 172 (347)
T cd05278 94 RFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVA 172 (347)
T ss_pred hhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEE
Confidence 125899999999987 8999999999999999999999999998 568899999999
Q ss_pred EcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCC
Q 021311 130 QNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 130 I~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|.|+ |.+|++++|+|+.+|+ .++++. .++++.+.++++|++.++++++.. .+.++..+++.+ +|++|||+++
T Consensus 173 I~g~-g~vg~~~iqlak~~g~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~-~d~vld~~g~ 246 (347)
T cd05278 173 VIGA-GPVGLCAVAGARLLGAARIIAVD----SNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRG-VDCVIEAVGF 246 (347)
T ss_pred EECC-CHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCC-CcEEEEccCC
Confidence 9875 9999999999999997 566664 267778888899999999887653 355777776655 9999999998
Q ss_pred -ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc--
Q 021311 208 -NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-- 284 (314)
Q Consensus 208 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-- 284 (314)
......+++|+++|+++.+|..............+.+++++.+..... .+.++.+++++.++.+.+.
T Consensus 247 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~ 316 (347)
T cd05278 247 EETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV----------RARMPELLDLIEEGKIDPSKL 316 (347)
T ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc----------hhHHHHHHHHHHcCCCChhHc
Confidence 566889999999999999985433221112223345677777643211 3578889999999999863
Q ss_pred -ceeeccccHHHHHHHHhccCC-CCCceEeeC
Q 021311 285 -MELVPFNNFQTALSKALGLHG-SQPKQVIKF 314 (314)
Q Consensus 285 -~~~~~~~~~~~a~~~~~~~~~-~~~k~vi~~ 314 (314)
+..+++++++++++.+..++. .+ |+|+++
T Consensus 317 ~~~~~~~~~~~~a~~~~~~~~~~~~-~~vv~~ 347 (347)
T cd05278 317 ITHRFPLDDILKAYRLFDNKPDGCI-KVVIRP 347 (347)
T ss_pred EEEEecHHHHHHHHHHHhcCCCCce-EEEecC
Confidence 456999999999999988776 55 998864
No 63
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.8e-38 Score=275.86 Aligned_cols=291 Identities=22% Similarity=0.228 Sum_probs=232.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------- 73 (314)
++++.|+|+++||+||+.++++|++|++.+.+.++.. .+|.++|||++|+|+.+|+++..+++||+|+..+
T Consensus 15 ~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (339)
T PRK10083 15 EERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCY 93 (339)
T ss_pred EeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCc
Confidence 5788899999999999999999999999988876532 5689999999999999999999999999998421
Q ss_pred ------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 74 ------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 74 ------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..+|+|++|+.++.+.++++|++++++.++ +..++.++|++. +.+++++|++|+|+|+ |
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~~~~~~~g~~vlI~g~-g 170 (339)
T PRK10083 94 PCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-GRTGPTEQDVALIYGA-G 170 (339)
T ss_pred cccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-HhcCCCCCCEEEEECC-C
Confidence 114899999999999999999999998876 445778888644 5589999999999995 9
Q ss_pred HHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCc-cHHH
Q 021311 136 IVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGN-SASK 212 (314)
Q Consensus 136 ~~G~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~-~~~~ 212 (314)
++|++++|+|+. +|++++++++. ++++.+.++++|+++++++++... +.+.. .+. ++|++|||+|++ ....
T Consensus 171 ~vG~~~~~~a~~~~G~~~v~~~~~---~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~-~~d~vid~~g~~~~~~~ 244 (339)
T PRK10083 171 PVGLTIVQVLKGVYNVKAVIVADR---IDERLALAKESGADWVINNAQEPLGEALEE--KGI-KPTLIIDAACHPSILEE 244 (339)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcC---CHHHHHHHHHhCCcEEecCccccHHHHHhc--CCC-CCCEEEECCCCHHHHHH
Confidence 999999999996 69987766653 788889999999999998876432 33322 122 267999999964 5689
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cceeec
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVP 289 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~ 289 (314)
++++++++|+++.+|.... ...+....+..+++++.+... ..+.++.+++++.+|++.+ .++.|+
T Consensus 245 ~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 312 (339)
T PRK10083 245 AVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL-----------NANKFPVVIDWLSKGLIDPEKLITHTFD 312 (339)
T ss_pred HHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEec-----------ChhhHHHHHHHHHcCCCChHHheeeeec
Confidence 9999999999999996542 223333344457777776532 1245788999999999987 357899
Q ss_pred cccHHHHHHHHhccCCCCCceEeeC
Q 021311 290 FNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++++++|++.+.+++....|++++|
T Consensus 313 l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 313 FQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEec
Confidence 9999999999986543323999875
No 64
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=5.2e-38 Score=280.14 Aligned_cols=297 Identities=21% Similarity=0.262 Sum_probs=242.6
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC-------C--CCCC-ccCCcceEEEEEEecCCCCCCCCCCEEee
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------R--PKVP-AVGGYEGVGEVYSVGSAVTRLAPGDWVIP 71 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~-------~--~~~p-~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~ 71 (314)
++++.|.|++++|+||+.++++|..|.+...+.... . ...| .++|||++|+|+++|++++.+++||+|++
T Consensus 28 ~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 107 (398)
T TIGR01751 28 EVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVA 107 (398)
T ss_pred eecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEE
Confidence 467888899999999999999999998766553210 0 0123 37999999999999999999999999998
Q ss_pred CCC---------------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHH--hhcC
Q 021311 72 SPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTL 122 (314)
Q Consensus 72 ~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~ 122 (314)
... ..|+|++|+.++.+.++++|+++++++++.+...+.+||+++.. .+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~ 187 (398)
T TIGR01751 108 SCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATV 187 (398)
T ss_pred ccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCC
Confidence 641 24899999999999999999999999999999999999999865 4778
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-------------------
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL------------------- 183 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~------------------- 183 (314)
.++++++|+|++|.+|++++++|+.+|++++++++ ++++.+.++++|++.++|+++.
T Consensus 188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~----~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (398)
T TIGR01751 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS----SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTK 263 (398)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcC----CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhh
Confidence 99999999999999999999999999999887763 6778888999999999986532
Q ss_pred ----hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccc
Q 021311 184 ----EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSS 259 (314)
Q Consensus 184 ----~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (314)
+.+.+.+++++.+ +|++|||+|.......+++++++|+++.+|........++...++.++.++.+.....+
T Consensus 264 ~~~~~~~~~~~~~~~~g-~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 339 (398)
T TIGR01751 264 SFKRFGKRIRELTGGED-PDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANL--- 339 (398)
T ss_pred cchhHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcH---
Confidence 1244666676665 99999999987778899999999999999965544344444455566777776543221
Q ss_pred cCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 260 EKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 260 ~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+.++.++++++++++.+. ++.+++++++++|+.+.+++..+ |+|+++
T Consensus 340 -------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvv~~ 387 (398)
T TIGR01751 340 -------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQG-NVAVLV 387 (398)
T ss_pred -------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCc-eEEEEe
Confidence 346788899999998865 46899999999999999988888 998864
No 65
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=4.5e-38 Score=278.04 Aligned_cols=294 Identities=22% Similarity=0.288 Sum_probs=244.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCC---CCCCCEEeeCC-----
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR---LAPGDWVIPSP----- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~---~~~Gd~V~~~~----- 73 (314)
++.|.|.+.++||+|++.++++|++|+....+.++. .+|..+|||++|+|+.+|+++++ |++||+|++..
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~ 93 (367)
T cd08263 16 EEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCG 93 (367)
T ss_pred EEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCC
Confidence 467788899999999999999999999988887653 56889999999999999999988 99999999831
Q ss_pred -------------------------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHH
Q 021311 74 -------------------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 110 (314)
Q Consensus 74 -------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 110 (314)
...|+|++|+.++.+.++++|+++++.+++.++..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~ 173 (367)
T cd08263 94 KCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGF 173 (367)
T ss_pred CChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHH
Confidence 1258999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHH
Q 021311 111 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNV 188 (314)
Q Consensus 111 ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i 188 (314)
|||+++.+.+.+.+++++||+|+ |.+|++++++|+..|++ ++++.. ++++.+.++++|++.++++++.. .+.+
T Consensus 174 tA~~~l~~~~~~~~g~~VlI~g~-g~vG~~~~~lak~~G~~~vi~~~~----s~~~~~~~~~~g~~~v~~~~~~~~~~~l 248 (367)
T cd08263 174 TAYGALKHAADVRPGETVAVIGV-GGVGSSAIQLAKAFGASPIIAVDV----RDEKLAKAKELGATHTVNAAKEDAVAAI 248 (367)
T ss_pred HHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeC----CHHHHHHHHHhCCceEecCCcccHHHHH
Confidence 99999988888899999999964 99999999999999998 655552 67778888889999999887643 4567
Q ss_pred HHHhcCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCCCC-CcccccccceecceEEEEEechhhccccCHHHHH
Q 021311 189 KGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 266 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
+..+++.+ +|+++||+++. ....++++|+++|+++.+|..... ...+....++.+++++.+++.. .+ .
T Consensus 249 ~~~~~~~~-~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~ 318 (367)
T cd08263 249 REITGGRG-VDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA------RP---R 318 (367)
T ss_pred HHHhCCCC-CCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC------Cc---H
Confidence 77776665 99999999997 778899999999999999854322 2233444444678887774321 11 3
Q ss_pred HHHHHHHHHHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 267 NMIDYLLCLAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 267 ~~~~~~~~~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
+.++.+++++.++.+.+. ++.++++++.++++.+.+++..| |+|++
T Consensus 319 ~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g-~~~~~ 367 (367)
T cd08263 319 QDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHG-RAIVE 367 (367)
T ss_pred HHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccc-eeeeC
Confidence 568889999999998863 46799999999999999988777 98874
No 66
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=6.4e-38 Score=273.01 Aligned_cols=300 Identities=20% Similarity=0.231 Sum_probs=234.3
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----CC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-----SS 76 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-----~~ 76 (314)
++.|.|.|.++||+||+.++++|++|.....+.......+|..+|||++|+|++.| +..+++||+|++... ..
T Consensus 18 ~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~~~~~~~ 95 (326)
T cd08289 18 KNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYDLGVSHH 95 (326)
T ss_pred EEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccccCCCCC
Confidence 57788889999999999999999999876543221122458899999999999854 577999999998741 25
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhc---CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEE
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 153 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi 153 (314)
|+|++|+.++++.++++|+++++++++.+++.+.|||+++....+ ..++++|||+|++|.+|++++++|+.+|++++
T Consensus 96 g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~ 175 (326)
T cd08289 96 GGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVV 175 (326)
T ss_pred CcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEE
Confidence 899999999999999999999999999999999999988865333 34578999999999999999999999999998
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP 233 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 233 (314)
++++ ++++++.++++|++++++.++...+.++.+. +. ++|++|||+|+.....++++++++|+++.+|......
T Consensus 176 ~~~~----~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~-~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~ 249 (326)
T cd08289 176 ASTG----KADAADYLKKLGAKEVIPREELQEESIKPLE-KQ-RWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGE 249 (326)
T ss_pred EEec----CHHHHHHHHHcCCCEEEcchhHHHHHHHhhc-cC-CcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCC
Confidence 8874 6788889999999999987765444555553 33 4999999999987789999999999999999654433
Q ss_pred cccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCc-cccceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 234 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKL-KYDMELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.++++..++.+++++.+.+.... ......+.+..+.+.+..+.+ .+.++.|+++++.+||+.+.+++..+ |+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g-kvvv 324 (326)
T cd08289 250 VETTVFPFILRGVNLLGIDSVEC----PMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTG-RTVV 324 (326)
T ss_pred CCcchhhhhhccceEEEEEeEec----CchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccc-eEEE
Confidence 44445556678899988753211 011122344444444432222 23467899999999999999998887 9998
Q ss_pred eC
Q 021311 313 KF 314 (314)
Q Consensus 313 ~~ 314 (314)
++
T Consensus 325 ~~ 326 (326)
T cd08289 325 KL 326 (326)
T ss_pred eC
Confidence 74
No 67
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-37 Score=268.43 Aligned_cols=286 Identities=25% Similarity=0.312 Sum_probs=238.7
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
++.+.|.+.++||+||+.++++|+.|....... ..|..+|||++|+|+++|+++..|++||+|+++.. .|+|++
T Consensus 17 ~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g~~~~ 90 (305)
T cd08270 17 GEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGPAVGARVVGLGA-MGAWAE 90 (305)
T ss_pred EecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC-Ccceee
Confidence 367788899999999999999999998876521 23578999999999999999999999999999853 489999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|++++.+.++++|+++++++++++++.+.|||+++.+.... +|++++|+|++|.+|++++++|+..|++++.+++
T Consensus 91 ~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~---- 165 (305)
T cd08270 91 LVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVG---- 165 (305)
T ss_pred EEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC----
Confidence 99999999999999999999999999999999999876555 5999999999999999999999999999888874
Q ss_pred cHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccc
Q 021311 162 SDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF 241 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 241 (314)
++++.+.++++|++..++.... +.+ . ++|+++||.|+.....++++|+++|+++.+|........++...+
T Consensus 166 ~~~~~~~~~~~g~~~~~~~~~~-------~~~-~-~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 236 (305)
T cd08270 166 SPARAEGLRELGAAEVVVGGSE-------LSG-A-PVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAF 236 (305)
T ss_pred CHHHHHHHHHcCCcEEEecccc-------ccC-C-CceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcccccHHHH
Confidence 6788889988998766543321 122 2 499999999998889999999999999999965433333444444
Q ss_pred ee--cceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 242 IF--KDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 242 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.. +++++.++++.. +....+.++.+++++.++++.+. .+.+++++++++++.+.+++..+ |+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~g-kvvi~~ 305 (305)
T cd08270 237 VGGGGGRRLYTFFLYD------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRG-KAVLDV 305 (305)
T ss_pred hcccccceEEEEEccC------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence 33 588888887643 33455778999999999999865 46799999999999999988887 999875
No 68
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=9.2e-38 Score=273.34 Aligned_cols=291 Identities=20% Similarity=0.247 Sum_probs=238.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
++++|.|++.++||+|||.++++|++|+....+.++. ..|.++|||++|+|+++|++++.|++||+|++.+
T Consensus 15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~ 92 (338)
T PRK09422 15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGH 92 (338)
T ss_pred EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCC
Confidence 4678999999999999999999999999988887643 2367899999999999999999999999998621
Q ss_pred --------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 74 --------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 74 --------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
...|++++|+.++.+.++++|+++++.+++.++..+.|||+++ ..++++++++|||+|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~ 171 (338)
T PRK09422 93 CEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGA 171 (338)
T ss_pred ChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECC
Confidence 0148999999999999999999999999999999999999998 5688999999999995
Q ss_pred CcHHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh--hhHHHHHHHhcCCCCCcE-EEecCCCcc
Q 021311 134 TSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKNVKGLLANLPEPAL-GFNCVGGNS 209 (314)
Q Consensus 134 ~g~~G~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~i~~~~~~~g~~d~-v~d~~g~~~ 209 (314)
|++|++++++|+. .|++++.+++ ++++++.++++|++.+++++. ...+.+++.++ + +|+ ++++.+...
T Consensus 172 -g~vG~~~~~la~~~~g~~v~~~~~----~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--~-~d~vi~~~~~~~~ 243 (338)
T PRK09422 172 -GGLGNLALQYAKNVFNAKVIAVDI----NDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG--G-AHAAVVTAVAKAA 243 (338)
T ss_pred -cHHHHHHHHHHHHhCCCeEEEEeC----ChHHHHHHHHcCCcEEecccccccHHHHHHHhcC--C-CcEEEEeCCCHHH
Confidence 9999999999998 4999888874 778899999999999998753 23455666654 3 885 455555556
Q ss_pred HHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeec
Q 021311 210 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVP 289 (314)
Q Consensus 210 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 289 (314)
+..++++++++|+++.+|.... ..++.......++.++.+..+.. .+.++.+++++.+|++.+.++.++
T Consensus 244 ~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~g~l~~~v~~~~ 312 (338)
T PRK09422 244 FNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT----------RQDLEEAFQFGAEGKVVPKVQLRP 312 (338)
T ss_pred HHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC----------HHHHHHHHHHHHhCCCCccEEEEc
Confidence 6899999999999999985432 23334444555677776654321 245778889999999887677799
Q ss_pred cccHHHHHHHHhccCCCCCceEeeC
Q 021311 290 FNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++++|+.+.+++..+ |+++++
T Consensus 313 ~~~~~~a~~~~~~~~~~g-kvvv~~ 336 (338)
T PRK09422 313 LEDINDIFDEMEQGKIQG-RMVIDF 336 (338)
T ss_pred HHHHHHHHHHHHcCCccc-eEEEec
Confidence 999999999999988877 998864
No 69
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=7.7e-38 Score=252.37 Aligned_cols=294 Identities=23% Similarity=0.289 Sum_probs=241.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCC--CCCccCCcceEEEEEEec--CCCCCCCCCCEEeeCCCCC
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVG--SAVTRLAPGDWVIPSPPSS 76 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~--~~p~~~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~ 76 (314)
++|.+.|+|+++|||+|+.|.+++|. ++|.....+ --|+-+|...+|.++... |+..+|++||.|.+..
T Consensus 29 lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--- 101 (340)
T COG2130 29 LEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--- 101 (340)
T ss_pred eEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence 47899999999999999999999993 233322222 346778876655333322 6778899999999884
Q ss_pred CcccceEeeeccceEEcCCC---CCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEE
Q 021311 77 GTWQSYVVKDQSVWHKVSKD---SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 153 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi 153 (314)
+|++|..++.+.+.+++++ +++... .+..+..|||.+|.+.+++++|++|+|.+|+|++|..+.|+||..|++|+
T Consensus 102 -GWq~y~i~~~~~l~Kvd~~~~pl~~~Lg-vLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVV 179 (340)
T COG2130 102 -GWQEYAISDGEGLRKLDPSPAPLSAYLG-VLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVV 179 (340)
T ss_pred -cceEEEeechhhceecCCCCCCcchHHh-hcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEE
Confidence 8999999999999999865 333333 34558999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHHHHh-CCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKG-LGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSK 231 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 231 (314)
.++ +++++.+++.+ +|.+..+||+.+++ +.+++.+.+ ++|+.|||+|++.++..+..|+..+|++.+|..+.
T Consensus 180 Gia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~--GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~ 253 (340)
T COG2130 180 GIA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK--GIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQ 253 (340)
T ss_pred Eec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCC--CeEEEEEcCCchHHHHHHHhhccccceeeeeehhh
Confidence 999 58999999987 99999999998766 568887776 69999999999999999999999999999997765
Q ss_pred CCcc-c-----ccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccccee-eccccHHHHHHHHhccC
Q 021311 232 KPIT-V-----STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMEL-VPFNNFQTALSKALGLH 304 (314)
Q Consensus 232 ~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~-~~~~~~~~a~~~~~~~~ 304 (314)
.+.+ . ....++.+.+++.|+.....+ .....+.++++.+|+++|+++...+. -.||++++||.-|.+++
T Consensus 254 YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~----~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~ 329 (340)
T COG2130 254 YNAPELPPGPRRLPLLMAKRLRVQGFIVASDY----DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGK 329 (340)
T ss_pred cCCCCCCCCcchhhHHHhhhheeEEEEechhh----hhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCC
Confidence 4332 2 224467788999999773221 22334778999999999999988654 57999999999999999
Q ss_pred CCCCceEeeC
Q 021311 305 GSQPKQVIKF 314 (314)
Q Consensus 305 ~~~~k~vi~~ 314 (314)
..| |.|+++
T Consensus 330 N~G-K~vvKv 338 (340)
T COG2130 330 NFG-KLVVKV 338 (340)
T ss_pred ccc-eEEEEe
Confidence 999 999875
No 70
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.7e-37 Score=272.80 Aligned_cols=292 Identities=25% Similarity=0.306 Sum_probs=237.0
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--------CCCCCccCCcceEEEEEEecCCCC--CCCCCCEEe
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RPKVPAVGGYEGVGEVYSVGSAVT--RLAPGDWVI 70 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--------~~~~p~~~G~e~~G~V~~~G~~v~--~~~~Gd~V~ 70 (314)
+++++.|++++++|+||+.++++|+.|+....|.... ...+|..+|||++|+|+++|+.++ .|++||+|+
T Consensus 14 ~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~ 93 (350)
T cd08256 14 LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVI 93 (350)
T ss_pred EEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEE
Confidence 3578889999999999999999999999988775311 013577899999999999999999 899999999
Q ss_pred eCC----------------------------CCCCcccceEeeecc-ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhc
Q 021311 71 PSP----------------------------PSSGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 121 (314)
Q Consensus 71 ~~~----------------------------~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~ 121 (314)
+.. ...|+|++|+.++++ .++++|++++++.++.+ .+++|+|+++ +.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~ 171 (350)
T cd08256 94 SEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRAN 171 (350)
T ss_pred ECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence 721 125899999999988 57899999999999988 7899999998 6689
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcE
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPAL 200 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~ 200 (314)
++++++|+|.|+ |.+|++++++|+.+|++++++++. ++++.+.++++|+++++++.+. ..+.+.+++++.+ +|+
T Consensus 172 ~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~---~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~-vdv 246 (350)
T cd08256 172 IKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDL---KDERLALARKFGADVVLNPPEVDVVEKIKELTGGYG-CDI 246 (350)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC---CHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCC-CCE
Confidence 999999999555 999999999999999987766653 6778888899999999887754 4466777777766 999
Q ss_pred EEecCCCc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccc-eecceEEEEEechhhccccCHHHHHHHHHHHHHHHHc
Q 021311 201 GFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF-IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLARE 278 (314)
Q Consensus 201 v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 278 (314)
+|||+|+. ....++++++++|+++.+|.... ...+..... ..+++++.+++... ..++++++++++
T Consensus 247 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~ 314 (350)
T cd08256 247 YIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGP-----------YCYPIAIDLIAS 314 (350)
T ss_pred EEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCc-----------hhHHHHHHHHHc
Confidence 99999964 56789999999999999985432 222222222 35677777765421 246788999999
Q ss_pred CCccc---cceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 279 GKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 279 g~~~~---~~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
|.+++ .++.|+++++++|++.+.+++..+ |+++
T Consensus 315 g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~-kvv~ 350 (350)
T cd08256 315 GRLPTDGIVTHQFPLEDFEEAFELMARGDDSI-KVVL 350 (350)
T ss_pred CCCChhHheEEEeEHHHHHHHHHHHHhCCCce-EEeC
Confidence 99987 356799999999999999887776 8874
No 71
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.7e-37 Score=271.46 Aligned_cols=291 Identities=24% Similarity=0.341 Sum_probs=241.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
.+++.|+++++||+|+|.++++|+.|+....+.++.. .+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (337)
T cd08261 15 VDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECY 93 (337)
T ss_pred EECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCCh
Confidence 5788899999999999999999999999988876543 45788999999999999999999999999997311
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|+.++++ ++++|+++++++++.+ ..++++++++ ..++++++++|||+|+ |
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~-g 169 (337)
T cd08261 94 ACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGA-G 169 (337)
T ss_pred hhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECC-C
Confidence 15899999999999 9999999999999877 4788899888 6689999999999975 8
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCc-cHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKV 213 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~-~~~~~ 213 (314)
.+|++++|+|+.+|++++++++ ++++.+.++++|+++++++.+.. .+.+..++++.+ +|++|||.|+. ....+
T Consensus 170 ~vG~~a~~lA~~~g~~v~~~~~----s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~ 244 (337)
T cd08261 170 PIGLGVIQVAKARGARVIVVDI----DDERLEFARELGADDTINVGDEDVAARLRELTDGEG-ADVVIDATGNPASMEEA 244 (337)
T ss_pred HHHHHHHHHHHHcCCeEEEECC----CHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC-CCEEEECCCCHHHHHHH
Confidence 9999999999999999988874 67888888999999999888643 466777777665 99999999874 55889
Q ss_pred HHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc--c-ceeecc
Q 021311 214 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--D-MELVPF 290 (314)
Q Consensus 214 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~-~~~~~~ 290 (314)
+++|+++|+++.+|... ....+....+..+++++.+... ...+.++.+++++.+|.+++ . +..+++
T Consensus 245 ~~~l~~~G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~ 313 (337)
T cd08261 245 VELVAHGGRVVLVGLSK-GPVTFPDPEFHKKELTILGSRN----------ATREDFPDVIDLLESGKVDPEALITHRFPF 313 (337)
T ss_pred HHHHhcCCEEEEEcCCC-CCCccCHHHHHhCCCEEEEecc----------CChhhHHHHHHHHHcCCCChhhheEEEeeH
Confidence 99999999999998543 2233334445556777766421 12356788899999999987 3 567999
Q ss_pred ccHHHHHHHHhccC-CCCCceEeeC
Q 021311 291 NNFQTALSKALGLH-GSQPKQVIKF 314 (314)
Q Consensus 291 ~~~~~a~~~~~~~~-~~~~k~vi~~ 314 (314)
+++.++++.+.+++ ..+ |+|++|
T Consensus 314 ~~~~~a~~~~~~~~~~~~-k~v~~~ 337 (337)
T cd08261 314 EDVPEAFDLWEAPPGGVI-KVLIEF 337 (337)
T ss_pred HHHHHHHHHHhcCCCceE-EEEEeC
Confidence 99999999999874 555 999876
No 72
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2e-37 Score=271.47 Aligned_cols=293 Identities=22% Similarity=0.248 Sum_probs=234.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCC----------CCCCCCccCCcceEEEEEEecCCCCC-CCCCCEEe
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP----------VRPKVPAVGGYEGVGEVYSVGSAVTR-LAPGDWVI 70 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~----------~~~~~p~~~G~e~~G~V~~~G~~v~~-~~~Gd~V~ 70 (314)
++++.|++++++|+|+|.++++|+.|+....|... ..+.+|.++|+|++|+|+++|++++. +++||+|+
T Consensus 14 ~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~ 93 (341)
T cd08262 14 RDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVT 93 (341)
T ss_pred EecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEE
Confidence 57889999999999999999999999998887321 11235788999999999999999997 99999999
Q ss_pred eCCC----------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 71 PSPP----------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 71 ~~~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
+++. ..|+|++|++++.+.++++|+++++++++ ++.++++||+++ ..++++++++|||+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~- 170 (341)
T cd08262 94 SLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGC- 170 (341)
T ss_pred ecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECC-
Confidence 8731 25899999999999999999999999887 566888999996 6689999999999986
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH----HHHHHHhcCCCCCcEEEecCCCc-c
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLLANLPEPALGFNCVGGN-S 209 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~----~~i~~~~~~~g~~d~v~d~~g~~-~ 209 (314)
|++|++++|+|+.+|++++++++. ++++.+.++++|+++++++++... ..+...+.+.+ +|+++||+|+. .
T Consensus 171 g~vg~~~~~la~~~G~~~v~~~~~---~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-~d~vid~~g~~~~ 246 (341)
T cd08262 171 GPIGLAVIAALKARGVGPIVASDF---SPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK-PAVIFECVGAPGL 246 (341)
T ss_pred CHHHHHHHHHHHHcCCcEEEEECC---CHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC-CCEEEECCCCHHH
Confidence 999999999999999987776653 688888889999999998765421 13444555554 99999999984 5
Q ss_pred HHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ce
Q 021311 210 ASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---ME 286 (314)
Q Consensus 210 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~ 286 (314)
...++++++++|+++.+|...... ...+...+.+++++.+.... . .+.+..+++++++|.+.+. ++
T Consensus 247 ~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~l~~~g~i~~~~~i~~ 315 (341)
T cd08262 247 IQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSLGY------T----PEEFADALDALAEGKVDVAPMVTG 315 (341)
T ss_pred HHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEecc------c----HHHHHHHHHHHHcCCCChHHheEE
Confidence 688899999999999998553221 12222223466777654321 1 1356788899999999863 46
Q ss_pred eeccccHHHHHHHHhccCCCCCceEee
Q 021311 287 LVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 287 ~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.+++++++++++.+.+++..+ |+|++
T Consensus 316 ~~~l~~~~~a~~~~~~~~~~~-kvvv~ 341 (341)
T cd08262 316 TVGLDGVPDAFEALRDPEHHC-KILVD 341 (341)
T ss_pred EeeHHHHHHHHHHHhcCCCce-EEEeC
Confidence 799999999999999988877 99874
No 73
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.1e-37 Score=267.12 Aligned_cols=291 Identities=23% Similarity=0.246 Sum_probs=239.0
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----CCC
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-----SSG 77 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-----~~g 77 (314)
+.+.|.+.++||+||+.++++|+.|+....+.++. ...|.++|||++|+|+++|+ ..+++||+|+++.. ..|
T Consensus 19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g 95 (320)
T cd08243 19 EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDG 95 (320)
T ss_pred ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCc
Confidence 55667789999999999999999999988886543 24578999999999999995 57999999998752 248
Q ss_pred cccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 78 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 78 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
+|++|+.++++.++++|+++++++++.++.++.|||+++.+..++++|++|||+|++|.+|++++++|+..|++++.+++
T Consensus 96 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~ 175 (320)
T cd08243 96 SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTR 175 (320)
T ss_pred ccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999988874
Q ss_pred CCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCc--c
Q 021311 158 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI--T 235 (314)
Q Consensus 158 ~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~ 235 (314)
++++++.++++|++++++......+.++++ +. ++|+++||+|+......+++++++|+++.+|....... .
T Consensus 176 ----~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~-~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 248 (320)
T cd08243 176 ----SPERAALLKELGADEVVIDDGAIAEQLRAA--PG-GFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLED 248 (320)
T ss_pred ----CHHHHHHHHhcCCcEEEecCccHHHHHHHh--CC-CceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcccCC
Confidence 677888888999988876544444567666 44 49999999999878899999999999999986432211 1
Q ss_pred ccccc--ceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 236 VSTSA--FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 236 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
..... .+.+++++.++..... ....++.++++++++.+++. ++.++++++++|++.+.+++..+ |+|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~-kvvv 319 (320)
T cd08243 249 FNPMDDIPSGVNLTLTGSSSGDV--------PQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFG-KVVV 319 (320)
T ss_pred cchhhhhhhccceEEEecchhhh--------hHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCC-cEEe
Confidence 11111 2256777776654221 13567888999999998864 57899999999999999887777 8775
No 74
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.9e-37 Score=270.10 Aligned_cols=292 Identities=23% Similarity=0.266 Sum_probs=245.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEee----------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP---------- 71 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~---------- 71 (314)
++++.|.+.+++|+||+.++++|+.|+....|..+. ..+|..+|+|++|+|+.+|++++.+++||+|++
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~ 94 (345)
T cd08260 16 REVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCP 94 (345)
T ss_pred EEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCc
Confidence 467888899999999999999999999998887653 256889999999999999999999999999987
Q ss_pred -----------------CCCCCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcC
Q 021311 72 -----------------SPPSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 132 (314)
Q Consensus 72 -----------------~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g 132 (314)
+.. .|+|++|++++.+ .++++|++++.++++.++.+++|||+++.+.+++.++++++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g 173 (345)
T cd08260 95 YCRAGDSNVCEHQVQPGFTH-PGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG 173 (345)
T ss_pred cccCcCcccCCCCcccccCC-CCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEEC
Confidence 211 5899999999975 89999999999999999999999999998778899999999999
Q ss_pred CCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh-h-hHHHHHHHhcCCCCCcEEEecCCC-cc
Q 021311 133 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALGFNCVGG-NS 209 (314)
Q Consensus 133 ~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~-~-~~~~i~~~~~~~g~~d~v~d~~g~-~~ 209 (314)
+|.+|++++++|+..|+++++++. +.++.+.++++|++.++++++ . ..+.++.+..+ + +|++|||.|+ ..
T Consensus 174 -~g~vg~~~~~~a~~~G~~vi~~~~----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~-~d~vi~~~g~~~~ 246 (345)
T cd08260 174 -CGGVGLSAVMIASALGARVIAVDI----DDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-G-AHVSVDALGIPET 246 (345)
T ss_pred -CCHHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-C-CCEEEEcCCCHHH
Confidence 599999999999999999988874 677888888999999998876 3 34567777766 4 9999999986 45
Q ss_pred HHHHHHhcccCCEEEEEcCCCCCC--cccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---
Q 021311 210 ASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD--- 284 (314)
Q Consensus 210 ~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~--- 284 (314)
....+++++++|+++.+|...... ..++...+..+++++.+..... ...++.++++++++++.+.
T Consensus 247 ~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~i~~~~~~ 316 (345)
T cd08260 247 CRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP----------AHRYDAMLALIASGKLDPEPLV 316 (345)
T ss_pred HHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC----------HHHHHHHHHHHHcCCCChhhhe
Confidence 588999999999999998654332 2334444556788888765421 2457788899999998753
Q ss_pred ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 285 MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 285 ~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
++.+++++++++++.+..++..+ |+|++
T Consensus 317 ~~~~~~~~~~~a~~~~~~~~~~~-~~v~~ 344 (345)
T cd08260 317 GRTISLDEAPDALAAMDDYATAG-ITVIT 344 (345)
T ss_pred eEEecHHHHHHHHHHHHcCCCCc-eEEec
Confidence 56799999999999999988887 88875
No 75
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.3e-37 Score=269.82 Aligned_cols=294 Identities=23% Similarity=0.248 Sum_probs=241.5
Q ss_pred ccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 2 IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 2 ~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++.|+| .++||+||+.++++|+.|+..+.|.++.. .+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~ 93 (345)
T cd08286 15 EDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTC 93 (345)
T ss_pred EecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCC
Confidence 56788886 79999999999999999999998876532 45789999999999999999999999999998531
Q ss_pred ---------------------CCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEc
Q 021311 75 ---------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 131 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 131 (314)
..|+|++|+.++.+ .++++|++++..+++.++..+++||+++...+++++++++||.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 173 (345)
T cd08286 94 GYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIV 173 (345)
T ss_pred hHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEE
Confidence 02889999999987 8999999999999999999999999987777889999999998
Q ss_pred CCCcHHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCc-
Q 021311 132 GATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN- 208 (314)
Q Consensus 132 g~~g~~G~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~- 208 (314)
|+ |++|++++|+|+.+| .+++++. .++++.+.++++|++.++++.+. ..+.+.+++.+.+ +|++|||++..
T Consensus 174 g~-g~~g~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~-~d~vld~~g~~~ 247 (345)
T cd08286 174 GA-GPVGLAALLTAQLYSPSKIIMVD----LDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG-VDVVIEAVGIPA 247 (345)
T ss_pred CC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC-CCEEEECCCCHH
Confidence 86 999999999999999 5666643 26777888899999999988754 3456777777665 99999999864
Q ss_pred cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cc
Q 021311 209 SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DM 285 (314)
Q Consensus 209 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~ 285 (314)
.+..++++++++|+++.+|... ....+++...+.+++++.+.... .+.++.+.++++++.+.+ .+
T Consensus 248 ~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~ 315 (345)
T cd08286 248 TFELCQELVAPGGHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD-----------TNTTPMLLKLVSSGKLDPSKLVT 315 (345)
T ss_pred HHHHHHHhccCCcEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc-----------hhhHHHHHHHHHcCCCChHHcEE
Confidence 4588889999999999998543 23445555556788888875331 134778889999999875 35
Q ss_pred eeeccccHHHHHHHHhccCC-CCCceEeeC
Q 021311 286 ELVPFNNFQTALSKALGLHG-SQPKQVIKF 314 (314)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~~-~~~k~vi~~ 314 (314)
+.+++++++++++.+.+.+. ...|++|+|
T Consensus 316 ~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 316 HRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred eEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 78999999999999987632 235999875
No 76
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=6.4e-37 Score=265.85 Aligned_cols=303 Identities=24% Similarity=0.304 Sum_probs=252.5
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.+.|.+.+++|+||+.++++|+.|+....+.++....+|..+|||++|+|+++|+++..+++||+|.++.. .|+|++|
T Consensus 19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~-~g~~~~~ 97 (323)
T cd05276 19 EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA-GGGYAEY 97 (323)
T ss_pred ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecC-CCceeEE
Confidence 556667889999999999999999999888776544457889999999999999999999999999999853 4899999
Q ss_pred EeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc
Q 021311 83 VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162 (314)
Q Consensus 83 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~ 162 (314)
+.++.+.++++|+++++.+++.++.++.++|+++.+.+.+.++++++|+|++|++|++++++++..|++++.+.+ +
T Consensus 98 ~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~----~ 173 (323)
T cd05276 98 VVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAG----S 173 (323)
T ss_pred EEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcC----C
Confidence 999999999999999999999999999999999988888999999999999999999999999999999888774 5
Q ss_pred HHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccc
Q 021311 163 DEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF 241 (314)
Q Consensus 163 ~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 241 (314)
+++.+.++.+|.+.+++.... ..+.+...+.+.+ +|+++||.|+......+++++++|+++.+|........+....+
T Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~ 252 (323)
T cd05276 174 EEKLEACRALGADVAINYRTEDFAEEVKEATGGRG-VDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLAPL 252 (323)
T ss_pred HHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC-eEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCCCCCchHHH
Confidence 677788888998888887654 3355666666555 99999999988888899999999999999865443334444445
Q ss_pred eecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 242 IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
+.+++++.++..........+......++++.+++.++++.+. ++.|++++++++++.+.+++..+ |+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~ 323 (323)
T cd05276 253 LRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIG-KIVL 323 (323)
T ss_pred HHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcc-eEeC
Confidence 5688999888765432222344455677888999999988764 57899999999999999887776 8764
No 77
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.8e-37 Score=272.54 Aligned_cols=291 Identities=26% Similarity=0.339 Sum_probs=240.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------- 73 (314)
++++.|++++++|+|++.++++|+.|+..+.+.++. .+|..+|+|++|+|+++|++++.+++||+|++..
T Consensus 16 ~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (363)
T cd08279 16 EEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCR 93 (363)
T ss_pred EEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCCh
Confidence 577889999999999999999999999998887653 5678999999999999999999999999999842
Q ss_pred --------------------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHH
Q 021311 74 --------------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM 115 (314)
Q Consensus 74 --------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~ 115 (314)
...|+|++|+.++++.++++|+++++++++.+++++.+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~ 173 (363)
T cd08279 94 YCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGA 173 (363)
T ss_pred hhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHH
Confidence 125899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhc
Q 021311 116 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLA 193 (314)
Q Consensus 116 l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~ 193 (314)
+.+.++++++++|||+|+ |.+|++++++|+..|++ ++.++. ++++.+.++++|++++++++.. ...+++.++.
T Consensus 174 ~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~----~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~ 248 (363)
T cd08279 174 VVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDP----VPEKLELARRFGATHTVNASEDDAVEAVRDLTD 248 (363)
T ss_pred HHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC----CHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcC
Confidence 988899999999999965 99999999999999997 666653 6777788889999999988764 4456777765
Q ss_pred CCCCCcEEEecCCC-ccHHHHHHhcccCCEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHHHHHHH
Q 021311 194 NLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDY 271 (314)
Q Consensus 194 ~~g~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (314)
+.+ +|+++||+++ .....++++++++|+++.+|.... .+..+....+..++..+.++++... ...+.++.
T Consensus 249 ~~~-vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 320 (363)
T cd08279 249 GRG-ADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA-------NPRRDIPR 320 (363)
T ss_pred CCC-CCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc-------CcHHHHHH
Confidence 555 9999999995 455899999999999999985442 2334444445556677676554221 22467888
Q ss_pred HHHHHHcCCccc---cceeeccccHHHHHHHHhccCCCC
Q 021311 272 LLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQ 307 (314)
Q Consensus 272 ~~~~l~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~~ 307 (314)
+++++.++.+.+ .++.|+++++++|++.+.+++..+
T Consensus 321 ~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 359 (363)
T cd08279 321 LLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENAR 359 (363)
T ss_pred HHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCcee
Confidence 999999999885 346799999999999999877653
No 78
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.4e-37 Score=269.03 Aligned_cols=291 Identities=23% Similarity=0.331 Sum_probs=238.7
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++.+.|++.+++|+||+.++++|+.|+....+.++ .+..|.++|+|++|+|+++|++++.+++||+|+++..
T Consensus 15 ~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (343)
T cd08235 15 EEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECH 93 (343)
T ss_pred EEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCCh
Confidence 46788889999999999999999999999888764 2245789999999999999999999999999998631
Q ss_pred -------------------CCCcccceEeeeccc-----eEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEE
Q 021311 75 -------------------SSGTWQSYVVKDQSV-----WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 130 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 130 (314)
..|+|++|+.++.+. ++++|+++++.+++.+ .++.+||+++.. .++++|++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~VlV 171 (343)
T cd08235 94 YCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRK-AGIKPGDTVLV 171 (343)
T ss_pred HHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHh-cCCCCCCEEEE
Confidence 258999999999998 9999999999999876 688999999976 58999999999
Q ss_pred cCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCc
Q 021311 131 NGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN 208 (314)
Q Consensus 131 ~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~ 208 (314)
+|+ |.+|++++++|+..|++ +++++. ++++.+.++.+|.++++++++.. .+.+++.+.+.+ +|++|||+++.
T Consensus 172 ~g~-g~vg~~~~~la~~~g~~~v~~~~~----s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-vd~vld~~~~~ 245 (343)
T cd08235 172 IGA-GPIGLLHAMLAKASGARKVIVSDL----NEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRG-ADVVIVATGSP 245 (343)
T ss_pred ECC-CHHHHHHHHHHHHcCCcEEEEECC----CHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcC-CCEEEECCCCh
Confidence 975 99999999999999999 666653 67777788889999999887654 356777777665 99999999975
Q ss_pred -cHHHHHHhcccCCEEEEEcCCCCC-CcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---
Q 021311 209 -SASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--- 283 (314)
Q Consensus 209 -~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--- 283 (314)
.....+++++++|+++.+|..... ...+.......+++++.+.+... + +.++.+++++.++.+.+
T Consensus 246 ~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~----~~~~~~~~l~~~~~l~~~~~ 315 (343)
T cd08235 246 EAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS------P----EDYKEALELIASGKIDVKDL 315 (343)
T ss_pred HHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC------h----hhHHHHHHHHHcCCCChHHh
Confidence 568889999999999999864432 23333444556777777654321 1 45677889999999863
Q ss_pred cceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 284 DMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 284 ~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
....|+++++.++++.+.+++ .+ |+|++
T Consensus 316 ~~~~~~~~~~~~a~~~~~~~~-~~-k~vi~ 343 (343)
T cd08235 316 ITHRFPLEDIEEAFELAADGK-SL-KIVIT 343 (343)
T ss_pred eeeEeeHHHHHHHHHHHhCCC-cE-EEEeC
Confidence 245799999999999999988 76 99874
No 79
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=2.5e-37 Score=270.46 Aligned_cols=297 Identities=27% Similarity=0.351 Sum_probs=238.5
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
+++++.|+|+++||+|++.++++|+.|+....+.+. ..+|.++|||++|+|+.+|++++.+++||+|+++..
T Consensus 16 ~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~ 93 (339)
T cd08249 16 VVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPND 93 (339)
T ss_pred ccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCC
Confidence 357889999999999999999999999987755541 134678999999999999999999999999999752
Q ss_pred -CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcC----------CCCCEEEEcCCCcHHHHHHHH
Q 021311 75 -SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL----------NSGDSIVQNGATSIVGQCIIQ 143 (314)
Q Consensus 75 -~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~g~~g~~G~~a~~ 143 (314)
.+|+|++|++++.+.++++|+++++++++.+++.+.|||+++.+..++ .++++++|+|++|.+|+++++
T Consensus 94 ~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~ 173 (339)
T cd08249 94 PRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ 173 (339)
T ss_pred CCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHH
Confidence 148999999999999999999999999999999999999998776554 789999999999999999999
Q ss_pred HHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCC-ccHHHHHHhccc--
Q 021311 144 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQ-- 219 (314)
Q Consensus 144 la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~~~~l~~-- 219 (314)
+|+.+|++++.++ +.++++.++.+|+++++++.+.. .+.+++.++ . ++|+++|++|+ ..+..+++++++
T Consensus 174 ~a~~~G~~v~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~-~~d~vl~~~g~~~~~~~~~~~l~~~~ 246 (339)
T cd08249 174 LAKLAGYKVITTA-----SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-G-KLRYALDCISTPESAQLCAEALGRSG 246 (339)
T ss_pred HHHHcCCeEEEEE-----CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-C-CeeEEEEeeccchHHHHHHHHHhccC
Confidence 9999999998877 33677788889999999887643 456776665 3 49999999998 677899999999
Q ss_pred CCEEEEEcCCCCCCcccccccceecceEEEEEechhhcc--ccCHHHHHHHHHHHHHHHHcCCcccc-ceeec--cccHH
Q 021311 220 GGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLS--SEKATECRNMIDYLLCLAREGKLKYD-MELVP--FNNFQ 294 (314)
Q Consensus 220 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~--~~~~~ 294 (314)
+|+++.+|...... .+..+.+........+.. ...+......++.+.+++.++++.+. ...++ +++++
T Consensus 247 ~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 319 (339)
T cd08249 247 GGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQ 319 (339)
T ss_pred CCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHH
Confidence 99999998554322 111223333322222110 01233344667889999999999875 34577 99999
Q ss_pred HHHHHHhccC-CCCCceEeeC
Q 021311 295 TALSKALGLH-GSQPKQVIKF 314 (314)
Q Consensus 295 ~a~~~~~~~~-~~~~k~vi~~ 314 (314)
+||+.+.+++ ..+ |+|+++
T Consensus 320 ~a~~~~~~~~~~~~-kvvv~~ 339 (339)
T cd08249 320 EGLDLLRKGKVSGE-KLVVRL 339 (339)
T ss_pred HHHHHHHCCCccce-EEEEeC
Confidence 9999999988 666 999875
No 80
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=4.8e-37 Score=269.46 Aligned_cols=291 Identities=23% Similarity=0.236 Sum_probs=239.2
Q ss_pred CccCCCCCCC-CCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----
Q 021311 1 MIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----- 74 (314)
Q Consensus 1 i~~~~~p~~~-~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----- 74 (314)
+++++.|+|. ++||+|++.++++|+.|+....+.++. ..|..+|+|++|+|+++|++++.+++||+|++...
T Consensus 14 ~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 91 (344)
T cd08284 14 VEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGE 91 (344)
T ss_pred EEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCC
Confidence 3578889885 999999999999999999988887653 45789999999999999999999999999998531
Q ss_pred -------------------------CCCcccceEeeecc--ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCE
Q 021311 75 -------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS 127 (314)
Q Consensus 75 -------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 127 (314)
..|+|++|+.++++ .++++|+++++++++.++..++|||+++.. +++.++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~ 170 (344)
T cd08284 92 CFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDT 170 (344)
T ss_pred ChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCE
Confidence 13889999999965 999999999999999999999999999966 88999999
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCV 205 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~ 205 (314)
|||+|+ |.+|++++++|+.+|+ +++++. .++++.+.++++|+. .++.+.. +.+.+.+++++.+ +|++|||+
T Consensus 171 vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~-~dvvid~~ 243 (344)
T cd08284 171 VAVIGC-GPVGLCAVLSAQVLGAARVFAVD----PVPERLERAAALGAE-PINFEDAEPVERVREATEGRG-ADVVLEAV 243 (344)
T ss_pred EEEECC-cHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCCCC-CCEEEECC
Confidence 999975 9999999999999997 666664 267788888889975 4555543 4466777777665 99999999
Q ss_pred CCc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc-
Q 021311 206 GGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY- 283 (314)
Q Consensus 206 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~- 283 (314)
++. ....++++++++|+++.+|..............+.+++++.+... ...+.++.+++++.++.+.+
T Consensus 244 ~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~~ 313 (344)
T cd08284 244 GGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC----------PVRSLFPELLPLLESGRLDLE 313 (344)
T ss_pred CCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC----------CcchhHHHHHHHHHcCCCChH
Confidence 974 558999999999999999965544444444555667887765421 12466888999999999875
Q ss_pred --cceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 284 --DMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 284 --~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.++.+++++++++++.+.+++. + |+|++
T Consensus 314 ~~~~~~~~~~~~~~a~~~~~~~~~-~-k~Vi~ 343 (344)
T cd08284 314 FLIDHRMPLEEAPEAYRLFDKRKV-L-KVVLD 343 (344)
T ss_pred HhEeeeecHHHHHHHHHHHhcCCc-e-EEEec
Confidence 3567999999999999988776 6 99986
No 81
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-37 Score=270.33 Aligned_cols=291 Identities=24% Similarity=0.317 Sum_probs=240.7
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
++++|.|++.++||+|++.++++|+.|+....+.++.. .+|..+|||++|+|+.+|+.+..+++||+|++...
T Consensus 15 ~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~ 93 (334)
T PRK13771 15 IEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-KYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTC 93 (334)
T ss_pred EEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC-CCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCC
Confidence 35778899999999999999999999999888876532 45789999999999999999989999999998741
Q ss_pred --------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
..|+|++|+.++.+.++++|+++++..++.+++.+.+||+++.+. .++++++++|+|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~ 172 (334)
T PRK13771 94 EYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAG 172 (334)
T ss_pred hhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCC
Confidence 148999999999999999999999999999999999999999875 89999999999999
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHH
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 214 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~ 214 (314)
|.+|++++++|+..|++++.+++ ++++.+.++++ ++++++++ ...+.++++ + ++|+++||+|+.....++
T Consensus 173 g~~g~~~~~la~~~g~~vi~~~~----~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~--~~d~~ld~~g~~~~~~~~ 242 (334)
T PRK13771 173 GGVGIHAIQVAKALGAKVIAVTS----SESKAKIVSKY-ADYVIVGS-KFSEEVKKI--G--GADIVIETVGTPTLEESL 242 (334)
T ss_pred ccHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH-HHHhcCch-hHHHHHHhc--C--CCcEEEEcCChHHHHHHH
Confidence 99999999999999999888874 67777888878 77777665 333455553 2 499999999998778999
Q ss_pred HhcccCCEEEEEcCCCCCCc-ccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeecccc
Q 021311 215 KFLSQGGTMVTYGGMSKKPI-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNN 292 (314)
Q Consensus 215 ~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~ 292 (314)
++++++|+++.+|....... .......+.+++++.+.... ..+.++.+++++.++.+++. ++.|++++
T Consensus 243 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (334)
T PRK13771 243 RSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA----------TKRDVEEALKLVAEGKIKPVIGAEVSLSE 312 (334)
T ss_pred HHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC----------CHHHHHHHHHHHHcCCCcceEeeeEcHHH
Confidence 99999999999996443221 22222334578888776321 13567889999999998764 56799999
Q ss_pred HHHHHHHHhccCCCCCceEeeC
Q 021311 293 FQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 293 ~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++||+.+.+++..+ |++++.
T Consensus 313 ~~~a~~~~~~~~~~~-kvv~~~ 333 (334)
T PRK13771 313 IDKALEELKDKSRIG-KILVKP 333 (334)
T ss_pred HHHHHHHHHcCCCcc-eEEEec
Confidence 999999999887777 988763
No 82
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=7.3e-37 Score=267.64 Aligned_cols=294 Identities=25% Similarity=0.286 Sum_probs=246.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
.+.+.|.+.+++|+|++.++++|+.|.....+.++....+|.++|+|++|+|+.+|+.+..+++||+|++.+.
T Consensus 17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 96 (338)
T cd08254 17 EEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACA 96 (338)
T ss_pred eccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCCh
Confidence 4567888899999999999999999999998887644456889999999999999999999999999987210
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|+.++.+.++++|+++++++++.++.+++|||+++....+++++++|||.|+ |
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~-g 175 (338)
T cd08254 97 LCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGL-G 175 (338)
T ss_pred hhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-c
Confidence 14899999999999999999999999999999999999999988888999999999865 9
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCc-cHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGN-SASKV 213 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~-~~~~~ 213 (314)
.+|++++++|+..|++++.++. ++++.+.++.+|.+++++.++... +.+ ..+.+.+ +|+++||.|.. ....+
T Consensus 176 ~vG~~~~~la~~~G~~V~~~~~----s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~-~D~vid~~g~~~~~~~~ 249 (338)
T cd08254 176 GLGLNAVQIAKAMGAAVIAVDI----KEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG-FDVIFDFVGTQPTFEDA 249 (338)
T ss_pred HHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC-ceEEEECCCCHHHHHHH
Confidence 9999999999999999887773 677888888899999888776543 334 5555554 99999999865 55889
Q ss_pred HHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccH
Q 021311 214 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNF 293 (314)
Q Consensus 214 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 293 (314)
+++|+++|+++.+|... ....+....++.++.++.+++... .+.++.++++++++.+.+.++.++++++
T Consensus 250 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~~l~~~~~~~~~~~~ 318 (338)
T cd08254 250 QKAVKPGGRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGGT----------PEDLPEVLDLIAKGKLDPQVETRPLDEI 318 (338)
T ss_pred HHHhhcCCEEEEECCCC-CCCccCHHHHhhCccEEEEeccCC----------HHHHHHHHHHHHcCCCcccceeEcHHHH
Confidence 99999999999998543 223344455667788888764321 2567888899999999877778999999
Q ss_pred HHHHHHHhccCCCCCceEeeC
Q 021311 294 QTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 294 ~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++.+.+++..+ |+|+++
T Consensus 319 ~~a~~~~~~~~~~~-kvv~~~ 338 (338)
T cd08254 319 PEVLERLHKGKVKG-RVVLVP 338 (338)
T ss_pred HHHHHHHHcCCccc-eEEEeC
Confidence 99999999998887 999875
No 83
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.2e-36 Score=264.87 Aligned_cols=299 Identities=20% Similarity=0.211 Sum_probs=243.7
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----CC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-----SS 76 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-----~~ 76 (314)
+++|.|+|+++||+|++.++++|+.|.....+.++..+.+|..+|||++|+|+. +++..+++||+|+++.. ..
T Consensus 18 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~ 95 (324)
T cd08288 18 RELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHW 95 (324)
T ss_pred EECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCccCCCCCC
Confidence 578889999999999999999999999988886543335678899999999998 77788999999998631 15
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHH--hhcCC-CCCEEEEcCCCcHHHHHHHHHHHHcCCcEE
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSI 153 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~-~~~~vlI~g~~g~~G~~a~~la~~~g~~vi 153 (314)
|+|++|++++.+.++++|+++++++++.++..+++|+.++.. ..+.. ++++++|+|++|++|++++|+|+.+|++++
T Consensus 96 g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi 175 (324)
T cd08288 96 GGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVV 175 (324)
T ss_pred CcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEE
Confidence 899999999999999999999999999999999999877641 13445 678999999999999999999999999998
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP 233 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 233 (314)
+++. ++++++.++++|+++++++++... .++.++.+ ++|.++|++++......+..++.+|+++.+|.....+
T Consensus 176 ~~~~----~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~ 248 (324)
T cd08288 176 ASTG----RPEEADYLRSLGASEIIDRAELSE-PGRPLQKE--RWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGAD 248 (324)
T ss_pred EEeC----CHHHHHHHHhcCCCEEEEcchhhH-hhhhhccC--cccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCC
Confidence 8874 678888999999999998875332 44444444 4899999999866778888999999999999653322
Q ss_pred cccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 234 ITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
....+..++.+++++.+.+..... .....+.++.+.+++.++.+.+.++.+++++++++++.+.+++..+ |++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~-~vvv~ 323 (324)
T cd08288 249 LPTTVMPFILRGVTLLGIDSVMAP----IERRRAAWARLARDLDPALLEALTREIPLADVPDAAEAILAGQVRG-RVVVD 323 (324)
T ss_pred CCcchhhhhccccEEEEEEeeccc----chhhHHHHHHHHHHHhcCCccccceeecHHHHHHHHHHHhcCCccC-eEEEe
Confidence 333444454789999987643321 1234567788888999998887778899999999999999998887 99987
Q ss_pred C
Q 021311 314 F 314 (314)
Q Consensus 314 ~ 314 (314)
+
T Consensus 324 ~ 324 (324)
T cd08288 324 V 324 (324)
T ss_pred C
Confidence 4
No 84
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.8e-37 Score=266.78 Aligned_cols=290 Identities=29% Similarity=0.365 Sum_probs=240.6
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
+++|.|++.+++|+|++.++++|+.|+....|.++. ...|.++|||++|+|+++|++++.+++||+|+++..
T Consensus 16 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 94 (332)
T cd08259 16 EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCE 94 (332)
T ss_pred EEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCCh
Confidence 467888999999999999999999999998887654 256789999999999999999999999999998751
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|++++.+.++++|+++++++++.++..+.+||+++.. +++++++++||+|++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g 173 (332)
T cd08259 95 YCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGG 173 (332)
T ss_pred hhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCC
Confidence 14899999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 215 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~ 215 (314)
.+|++++++++..|++++.+++ ++++.+.+..++.+.+++..+ ..+.+.... ++|++++|+|......+++
T Consensus 174 ~vG~~~~~~a~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~d~v~~~~g~~~~~~~~~ 244 (332)
T cd08259 174 GVGIHAIQLAKALGARVIAVTR----SPEKLKILKELGADYVIDGSK-FSEDVKKLG----GADVVIELVGSPTIEESLR 244 (332)
T ss_pred HHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHcCCcEEEecHH-HHHHHHhcc----CCCEEEECCChHHHHHHHH
Confidence 9999999999999999988884 567777888889888887665 334454432 3999999999888889999
Q ss_pred hcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHH
Q 021311 216 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQ 294 (314)
Q Consensus 216 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~ 294 (314)
+++++|+++.+|........+.......++.++.+.... ....++.+++++.+|.+.+. ++.|++++++
T Consensus 245 ~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 314 (332)
T cd08259 245 SLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA----------TKADVEEALKLVKEGKIKPVIDRVVSLEDIN 314 (332)
T ss_pred HhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC----------CHHHHHHHHHHHHcCCCccceeEEEcHHHHH
Confidence 999999999998654332222222223466666665311 13457788899999998765 5689999999
Q ss_pred HHHHHHhccCCCCCceEee
Q 021311 295 TALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 295 ~a~~~~~~~~~~~~k~vi~ 313 (314)
++|+.+.+++..+ |++++
T Consensus 315 ~a~~~~~~~~~~~-kvv~~ 332 (332)
T cd08259 315 EALEDLKSGKVVG-RIVLK 332 (332)
T ss_pred HHHHHHHcCCccc-EEEeC
Confidence 9999999988777 88874
No 85
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.8e-37 Score=264.93 Aligned_cols=294 Identities=22% Similarity=0.233 Sum_probs=237.3
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhh-ccCCCCC-CCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTW 79 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~-~~~~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~ 79 (314)
++++.|+++++||+|++.++++|+.|+... .+..+.. +..|..+|+|++|+|+++|+.++.+++||+|+++. .|+|
T Consensus 10 ~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~g~~ 87 (312)
T cd08269 10 EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--GGAF 87 (312)
T ss_pred EECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--CCcc
Confidence 577889999999999999999999999887 6654321 23478999999999999999999999999999986 5899
Q ss_pred cceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecC
Q 021311 80 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRD 158 (314)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~ 158 (314)
++|+.++.+.++++|+++ ..++....++.++|+++. .++++++++++|+|+ |.+|++++++|+..|++ ++++.+
T Consensus 88 ~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~~~- 162 (312)
T cd08269 88 AEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDR- 162 (312)
T ss_pred eeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECC-
Confidence 999999999999999998 233332267889999987 689999999999975 99999999999999999 777663
Q ss_pred CCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCCCCCccc
Q 021311 159 RAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITV 236 (314)
Q Consensus 159 ~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 236 (314)
++++.+.++.+|++++++.+.. ..+.+++++.+.+ +|+++||.|+. .....+++|+++|+++.+|.....+..+
T Consensus 163 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~ 238 (312)
T cd08269 163 ---RPARLALARELGATEVVTDDSEAIVERVRELTGGAG-ADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPV 238 (312)
T ss_pred ---CHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCccc
Confidence 6777888889999888886643 4566888777766 99999999875 4588999999999999998554333334
Q ss_pred ccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 237 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.+.....+++++.++...+ +....+.++.+++++.++.+.+ .++.|++++++++++.+.+++....|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 239 PFQTWNWKGIDLINAVERD------PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CHHHHhhcCCEEEEecccC------ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 4445556777777654322 2334577889999999999886 24679999999999999998764348876
No 86
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=2.6e-36 Score=261.72 Aligned_cols=301 Identities=25% Similarity=0.294 Sum_probs=252.9
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.+.|.+.+++|+|+|.++++|+.|+....+.++. .+|..+|||++|+|+.+|+++.++++||+|+++.. .|+|++|
T Consensus 18 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-~g~~~~~ 94 (320)
T cd05286 18 DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGP-PGAYAEY 94 (320)
T ss_pred ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCCCCEEEEecC-CCceeEE
Confidence 44556688999999999999999999988876643 45778999999999999999999999999999752 4799999
Q ss_pred EeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc
Q 021311 83 VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162 (314)
Q Consensus 83 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~ 162 (314)
+.++.+.++++|++++..+++.++..+.++|+++.+.+++.++++++|+|++|.+|++++++++.+|++++++++ +
T Consensus 95 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~----~ 170 (320)
T cd05286 95 RVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVS----S 170 (320)
T ss_pred EEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcC----C
Confidence 999999999999999999999999999999999988889999999999999899999999999999999988874 6
Q ss_pred HHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccc
Q 021311 163 DEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF 241 (314)
Q Consensus 163 ~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 241 (314)
+++.+.++.+|++++++..+. ..+.++.++.+.+ +|+++||.++.....++++++++|+++.+|........+....+
T Consensus 171 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 249 (320)
T cd05286 171 EEKAELARAAGADHVINYRDEDFVERVREITGGRG-VDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRL 249 (320)
T ss_pred HHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCC-eeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHH
Confidence 777888888999998887664 3456777777666 99999999988778999999999999999854433222333333
Q ss_pred eecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 242 IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
..+++++.+.....+. ..+....+.+..+++++.++.+.+. ++.|++++++++++.+.+++..+ |+++++
T Consensus 250 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-~vv~~~ 320 (320)
T cd05286 250 SKGSLFLTRPSLFHYI--ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTG-KLLLIP 320 (320)
T ss_pred HhcCcEEEEEehhhhc--CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence 3678888776654432 3466677788899999999988864 56799999999999999988777 998864
No 87
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.2e-36 Score=266.07 Aligned_cols=301 Identities=23% Similarity=0.248 Sum_probs=246.5
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--CCCcc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTW 79 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--~~g~~ 79 (314)
++++.|++.+++|+|++.++++|+.|+....+.++. ..+|.++|||++|+|+++|+++..+++||+|++... ..|+|
T Consensus 21 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~ 99 (336)
T cd08252 21 IELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSN 99 (336)
T ss_pred ccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccc
Confidence 356778889999999999999999999988776552 245778999999999999999999999999998742 35899
Q ss_pred cceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCC-----CCEEEEcCCCcHHHHHHHHHHHHcC-CcEE
Q 021311 80 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGATSIVGQCIIQIARHRG-IHSI 153 (314)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~g~~g~~G~~a~~la~~~g-~~vi 153 (314)
++|+.++.+.++++|+++++++++.++..+.+||+++.+.+.+++ +++|+|+|++|++|++++++|+.+| ++++
T Consensus 100 ~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~ 179 (336)
T cd08252 100 AEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVI 179 (336)
T ss_pred eEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEE
Confidence 999999999999999999999999999999999999888788888 9999999988999999999999999 8988
Q ss_pred EEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC-ccHHHHHHhcccCCEEEEEcCCCCC
Q 021311 154 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
.+++ ++++.+.++++|++++++..+...+.++.. .+. ++|+++||+|+ .....++++++++|+++.+|...
T Consensus 180 ~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~-~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~-- 251 (336)
T cd08252 180 ATAS----RPESIAWVKELGADHVINHHQDLAEQLEAL-GIE-PVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ-- 251 (336)
T ss_pred EEcC----ChhhHHHHHhcCCcEEEeCCccHHHHHHhh-CCC-CCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--
Confidence 8874 677788889999999998775444556533 333 49999999996 56689999999999999998542
Q ss_pred CcccccccceecceEEEEEechhhcc--ccCHHHHHHHHHHHHHHHHcCCcccc----ceeeccccHHHHHHHHhccCCC
Q 021311 233 PITVSTSAFIFKDLSLKGFWLQKWLS--SEKATECRNMIDYLLCLAREGKLKYD----MELVPFNNFQTALSKALGLHGS 306 (314)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~~~~----~~~~~~~~~~~a~~~~~~~~~~ 306 (314)
..++...+..+++++.+..+..+.. ...+....+.++.+++++.+|.+.+. ...+++++++++++.+.+++..
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 330 (336)
T cd08252 252 -EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTI 330 (336)
T ss_pred -CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCcc
Confidence 2344444446788888766543111 11222445778899999999999864 2347999999999999998887
Q ss_pred CCceEee
Q 021311 307 QPKQVIK 313 (314)
Q Consensus 307 ~~k~vi~ 313 (314)
+ |++++
T Consensus 331 ~-~vv~~ 336 (336)
T cd08252 331 G-KIVLE 336 (336)
T ss_pred c-eEEeC
Confidence 7 88864
No 88
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.8e-36 Score=263.36 Aligned_cols=302 Identities=25% Similarity=0.314 Sum_probs=253.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC----CCC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSG 77 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----~~g 77 (314)
++++.|++.+++|+|++.++++|++|+....+.++..+..|..+|||++|+|+++|+.+.+|++||+|++... ..|
T Consensus 18 ~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g 97 (325)
T cd08253 18 GDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQG 97 (325)
T ss_pred eecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCc
Confidence 4677888899999999999999999999888876544457889999999999999999999999999999852 158
Q ss_pred cccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 78 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 78 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
++++|+.++.+.++++|+++++++++.++.++.+||+++...+++.+|++++|+|+++.+|++++++++..|++++.+++
T Consensus 98 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~ 177 (325)
T cd08253 98 TAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATAS 177 (325)
T ss_pred ceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999888874
Q ss_pred CCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccc
Q 021311 158 DRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITV 236 (314)
Q Consensus 158 ~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 236 (314)
++++.+.+..+|.+++++.... ..+.+++++.+.+ +|+++||++.......+++++++|+++.+|... ....+
T Consensus 178 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~-~~~~~ 251 (325)
T cd08253 178 ----SAEGAELVRQAGADAVFNYRAEDLADRILAATAGQG-VDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGG-LRGTI 251 (325)
T ss_pred ----CHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc-eEEEEECCchHHHHHHHHhhCCCCEEEEEeecC-CcCCC
Confidence 5777888888999988887654 3456777666655 999999999987788899999999999998544 22334
Q ss_pred ccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 237 STSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
....++.++.++.+..... ..+....+.++.+.+++.++.+++. ++.+++++++++++.+.+++..+ |+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-kvv~~~ 325 (325)
T cd08253 252 PINPLMAKEASIRGVLLYT----ATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIG-KVVLDP 325 (325)
T ss_pred ChhHHHhcCceEEeeehhh----cCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcc-eEEEeC
Confidence 4444456777777765322 2355667788888999999988765 56899999999999999988777 998864
No 89
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.5e-36 Score=259.19 Aligned_cols=298 Identities=25% Similarity=0.298 Sum_probs=246.2
Q ss_pred CCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-CCCCcccceEe
Q 021311 6 PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGTWQSYVV 84 (314)
Q Consensus 6 ~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~g~~~~~~~ 84 (314)
.|++.+++|+|++.++++|+.|+....+.++..+.+|..+|+|++|+|+++|+.+.++++||+|+++. ...|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 57789999999999999999999998887655446788999999999999999999999999999875 23489999999
Q ss_pred eeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 021311 85 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 164 (314)
Q Consensus 85 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~ 164 (314)
++++.++++|+++++++++.++..+.+||+++. ..++++|++++|+++++.+|++++++++.+|++++.+++ +++
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~----~~~ 156 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATAS----SDD 156 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcC----CHH
Confidence 999999999999999999999999999999985 589999999999999999999999999999999888874 677
Q ss_pred HHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC-cccccccce
Q 021311 165 AKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFI 242 (314)
Q Consensus 165 ~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~ 242 (314)
+.+.++.+|.+.+++.... ..+.++..+.+.+ +|+++||+++......+++++++|+++.+|...... ..+... .+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~ 234 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRG-VDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VL 234 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-Hh
Confidence 8888889999999887664 3456777777666 999999998877788999999999999988543221 122222 23
Q ss_pred ecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 243 FKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.+++.+....+..+.. ..+....+.+..+.+++.+|.+++. ++.|++++++++++.+.+++..+ |+++
T Consensus 235 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~iv~ 303 (303)
T cd08251 235 SNNQSFHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIG-KVVV 303 (303)
T ss_pred hcCceEEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcc-eEeC
Confidence 3455555554433222 2455667788899999999998864 57899999999999999988777 8764
No 90
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.5e-36 Score=265.79 Aligned_cols=290 Identities=25% Similarity=0.354 Sum_probs=229.8
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhc-cCCCC-CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------ 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~-~~~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------ 73 (314)
++.+.|+++++||+||+.++++|++|+.... +.++. ...+|.++|+|++|+|+++|+++++|++||+|++.+
T Consensus 12 ~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~ 91 (339)
T cd08232 12 EERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGT 91 (339)
T ss_pred EEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCC
Confidence 5678899999999999999999999988763 33211 113577999999999999999999999999998731
Q ss_pred -------------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEE
Q 021311 74 -------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI 128 (314)
Q Consensus 74 -------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v 128 (314)
...|+|++|++++.+.++++|+++++++++. ..++++||+++.+.... ++++|
T Consensus 92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~V 169 (339)
T cd08232 92 CDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRV 169 (339)
T ss_pred ChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEE
Confidence 1258999999999999999999999999876 56888999999876666 99999
Q ss_pred EEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 129 VQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 129 lI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
||.|+ |.+|++++|+|+.+|+ +++++.. ++++.+.++.+|.++++++++.. +..+....+++|+++||.|.
T Consensus 170 LI~g~-g~vG~~~~~lak~~G~~~v~~~~~----s~~~~~~~~~~g~~~vi~~~~~~---~~~~~~~~~~vd~vld~~g~ 241 (339)
T cd08232 170 LVTGA-GPIGALVVAAARRAGAAEIVATDL----ADAPLAVARAMGADETVNLARDP---LAAYAADKGDFDVVFEASGA 241 (339)
T ss_pred EEECC-CHHHHHHHHHHHHcCCcEEEEECC----CHHHHHHHHHcCCCEEEcCCchh---hhhhhccCCCccEEEECCCC
Confidence 99875 9999999999999999 5555542 57777788889999999887644 23333332349999999996
Q ss_pred -ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc--
Q 021311 208 -NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-- 284 (314)
Q Consensus 208 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-- 284 (314)
......+++|+++|+++.+|... .+....+...+.+++++.+... ..+.++.+++++.+|.+++.
T Consensus 242 ~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~ 309 (339)
T cd08232 242 PAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFR-----------FDDEFAEAVRLLAAGRIDVRPL 309 (339)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEec-----------CHHHHHHHHHHHHcCCCCchhh
Confidence 45688999999999999998544 2233333444567788777642 12457788899999988642
Q ss_pred -ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 285 -MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 285 -~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.+.|++++++++++.+.+++..+ |+|+++
T Consensus 310 ~~~~~~~~~~~~a~~~~~~~~~~g-kvvv~~ 339 (339)
T cd08232 310 ITAVFPLEEAAEAFALAADRTRSV-KVQLSF 339 (339)
T ss_pred eeEEecHHHHHHHHHHHHhCCCce-eEEEeC
Confidence 46799999999999999887777 999875
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-36 Score=263.19 Aligned_cols=295 Identities=26% Similarity=0.294 Sum_probs=250.4
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--------
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-------- 74 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-------- 74 (314)
+.+.|.++++|++|++.++++|+.|+....+.++..+..|.++|||++|+|+++|+.+.++++||+|.+...
T Consensus 19 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~ 98 (336)
T cd08276 19 EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP 98 (336)
T ss_pred eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccc
Confidence 556677899999999999999999999988876654457889999999999999999999999999998651
Q ss_pred ------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHH
Q 021311 75 ------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 142 (314)
Q Consensus 75 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~ 142 (314)
..|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+.+++|++++|+|+ |++|++++
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~-g~~g~~~~ 177 (336)
T cd08276 99 TAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGT-GGVSLFAL 177 (336)
T ss_pred cccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECC-cHHHHHHH
Confidence 14789999999999999999999999999999999999999988889999999999964 99999999
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh-h-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccC
Q 021311 143 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQG 220 (314)
Q Consensus 143 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~-~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~ 220 (314)
++|+..|++++.+++ ++++++.+.++|.+.+++.+. . ....++..+++.+ +|+++||++......++++++++
T Consensus 178 ~~a~~~G~~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~ 252 (336)
T cd08276 178 QFAKAAGARVIATSS----SDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG-VDHVVEVGGPGTLAQSIKAVAPG 252 (336)
T ss_pred HHHHHcCCEEEEEeC----CHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC-CcEEEECCChHHHHHHHHhhcCC
Confidence 999999999888874 677888888899999988765 3 4456777777666 99999999987788999999999
Q ss_pred CEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHH
Q 021311 221 GTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSK 299 (314)
Q Consensus 221 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~ 299 (314)
|+++.+|..............+.+++++.++.... ...++.+++++.++.+.+. ++.+++++++++++.
T Consensus 253 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~ 322 (336)
T cd08276 253 GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRY 322 (336)
T ss_pred CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHH
Confidence 99999996544333444556678899999886532 2567788889988888764 568999999999999
Q ss_pred HhccCCCCCceEeeC
Q 021311 300 ALGLHGSQPKQVIKF 314 (314)
Q Consensus 300 ~~~~~~~~~k~vi~~ 314 (314)
+.+++..+ |+++++
T Consensus 323 ~~~~~~~~-kvv~~~ 336 (336)
T cd08276 323 LESGSHFG-KVVIRV 336 (336)
T ss_pred HHhCCCCc-eEEEeC
Confidence 99887777 988863
No 92
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.7e-36 Score=265.77 Aligned_cols=295 Identities=26% Similarity=0.298 Sum_probs=239.3
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++.+.|+++++||+||+.++++|+.|+....+.++. ..|..+|+|++|+|+.+|+++..|++||+|+++..
T Consensus 15 ~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~ 92 (343)
T cd08236 15 EDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCE 92 (343)
T ss_pred EecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCh
Confidence 567888999999999999999999999988776522 45788999999999999999999999999998721
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|+.++++.++++|+++++++++++ ..+++||+++. .++++++++|+|+|+ |
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~-g 169 (343)
T cd08236 93 YCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGA-G 169 (343)
T ss_pred hHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECC-C
Confidence 2589999999999999999999999999887 57889999996 588999999999975 9
Q ss_pred HHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCc-cHHHH
Q 021311 136 IVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKV 213 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~-~~~~~ 213 (314)
.+|++++++|+.+|++ ++++++ ++++.+.++++|++.++++++....+++..+++.+ +|+++||.|.. ....+
T Consensus 170 ~~g~~~~~lA~~~G~~~v~~~~~----~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~vld~~g~~~~~~~~ 244 (343)
T cd08236 170 TIGLLAIQWLKILGAKRVIAVDI----DDEKLAVARELGADDTINPKEEDVEKVRELTEGRG-ADLVIEAAGSPATIEQA 244 (343)
T ss_pred HHHHHHHHHHHHcCCCEEEEEcC----CHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCC-CCEEEECCCCHHHHHHH
Confidence 9999999999999998 776663 56778888889999999887544566777777665 99999999864 55889
Q ss_pred HHhcccCCEEEEEcCCCCCC-c-ccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cceee
Q 021311 214 LKFLSQGGTMVTYGGMSKKP-I-TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELV 288 (314)
Q Consensus 214 ~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~ 288 (314)
+++|+++|+++.+|...... . .......+.+++++.+++.... .+ ...+.++.+.+++.++.+.+ ....+
T Consensus 245 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 319 (343)
T cd08236 245 LALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYS----AP-FPGDEWRTALDLLASGKIKVEPLITHRL 319 (343)
T ss_pred HHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccc----cc-cchhhHHHHHHHHHcCCCChHHheeeee
Confidence 99999999999998554221 1 1122334467889888876322 11 23456788899999999862 24679
Q ss_pred ccccHHHHHHHHhc-cCCCCCceEe
Q 021311 289 PFNNFQTALSKALG-LHGSQPKQVI 312 (314)
Q Consensus 289 ~~~~~~~a~~~~~~-~~~~~~k~vi 312 (314)
++++++++++.+.+ +...+ |+|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~-k~v~ 343 (343)
T cd08236 320 PLEDGPAAFERLADREEFSG-KVLL 343 (343)
T ss_pred cHHHHHHHHHHHHcCCCCee-EEeC
Confidence 99999999999998 44455 8875
No 93
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2e-36 Score=267.95 Aligned_cols=290 Identities=21% Similarity=0.195 Sum_probs=232.8
Q ss_pred ccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------
Q 021311 2 IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------ 74 (314)
Q Consensus 2 ~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------ 74 (314)
+++|.|++ +++||+|||.++++|+.|++...|.++. .+|.++|||++|+|+++|+.+..+++||+|++...
T Consensus 15 ~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~ 92 (375)
T cd08282 15 EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRC 92 (375)
T ss_pred EeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCC
Confidence 57888986 7999999999999999999999887652 46889999999999999999999999999987211
Q ss_pred ------------------------------CCCcccceEeeecc--ceEEcCCCCCHH---HhhcccccHHHHHHHHHHh
Q 021311 75 ------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPME---YAATIIVNPLTALRMLEDF 119 (314)
Q Consensus 75 ------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~ 119 (314)
..|+|++|++++.+ .++++|++++++ .++.+..++++||+++ ..
T Consensus 93 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~ 171 (375)
T cd08282 93 RNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-EL 171 (375)
T ss_pred HHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-Hh
Confidence 13889999999975 899999999998 5677888899999999 66
Q ss_pred hcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCC
Q 021311 120 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPE 197 (314)
Q Consensus 120 ~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~ 197 (314)
+++++|++|+|.|+ |.+|++++|+|+.+|+ ++++ ++ .++++.+.++++|+. .+++++. ..+.+++++. . +
T Consensus 172 ~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~-~~---~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~-~-~ 243 (375)
T cd08282 172 AGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYV-VD---HVPERLDLAESIGAI-PIDFSDGDPVEQILGLEP-G-G 243 (375)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EC---CCHHHHHHHHHcCCe-EeccCcccHHHHHHHhhC-C-C
Confidence 89999999999876 9999999999999998 5666 43 278888899999984 5666543 4466777766 3 4
Q ss_pred CcEEEecCCCcc------------HHHHHHhcccCCEEEEEcCCCCCC------------cccccccceecceEEEEEec
Q 021311 198 PALGFNCVGGNS------------ASKVLKFLSQGGTMVTYGGMSKKP------------ITVSTSAFIFKDLSLKGFWL 253 (314)
Q Consensus 198 ~d~v~d~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 253 (314)
+|+++||+|++. +..++++++++|+++.+|...... ..++...++.++.++.+...
T Consensus 244 ~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
T cd08282 244 VDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA 323 (375)
T ss_pred CCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC
Confidence 999999999874 578899999999999888543221 12233334445555554321
Q ss_pred hhhccccCHHHHHHHHHHHHHHHHcCCccc---cceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 254 QKWLSSEKATECRNMIDYLLCLAREGKLKY---DMELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
...+.++.++++++++++++ .++.+++++++++++.+.+++ .+ |+|+++
T Consensus 324 ----------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~-kvvv~~ 375 (375)
T cd08282 324 ----------PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET-KVVIKP 375 (375)
T ss_pred ----------CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce-EEEeCC
Confidence 12356788899999999986 467899999999999999888 76 999864
No 94
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-36 Score=264.76 Aligned_cols=292 Identities=24% Similarity=0.284 Sum_probs=233.8
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccC-CCC-CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------ 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~-~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------ 73 (314)
++.+.|.+.++||+|+|.++++|+.|...+.+. .+. ...+|.++|+|++|+|+++|+.++++++||+|++.+
T Consensus 13 ~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 92 (343)
T cd05285 13 EERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRT 92 (343)
T ss_pred EECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCC
Confidence 567888899999999999999999998876322 111 113577899999999999999999999999998621
Q ss_pred ---------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcC
Q 021311 74 ---------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 132 (314)
Q Consensus 74 ---------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g 132 (314)
...|+|++|++++++.++++|+++++++++.+ .++.+||+++ ..+++++++++||.|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g 170 (343)
T cd05285 93 CEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFG 170 (343)
T ss_pred ChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC
Confidence 12589999999999999999999999999877 4788999997 669999999999987
Q ss_pred CCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhh----HHHHHHHhcCCCCCcEEEecCCC
Q 021311 133 ATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 133 ~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
+ |.+|++++++|+.+|++ ++++.+ ++++.+.++++|+++++++++.. .+.+.+.+++.+ +|++|||.|+
T Consensus 171 ~-g~vG~~a~~lak~~G~~~v~~~~~----~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~-~d~vld~~g~ 244 (343)
T cd05285 171 A-GPIGLLTAAVAKAFGATKVVVTDI----DPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG-PDVVIECTGA 244 (343)
T ss_pred C-CHHHHHHHHHHHHcCCcEEEEECC----CHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC-CCEEEECCCC
Confidence 6 89999999999999998 666653 67788888899999999887643 566777777765 9999999998
Q ss_pred c-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---
Q 021311 208 N-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--- 283 (314)
Q Consensus 208 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--- 283 (314)
. .....+++++++|+++.+|.... ...+++.....+++++.++... .+.++.+++++.++.+.+
T Consensus 245 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~l~~~~~ 312 (343)
T cd05285 245 ESCIQTAIYATRPGGTVVLVGMGKP-EVTLPLSAASLREIDIRGVFRY-----------ANTYPTAIELLASGKVDVKPL 312 (343)
T ss_pred HHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHhhCCcEEEEeccC-----------hHHHHHHHHHHHcCCCCchHh
Confidence 6 66889999999999999984432 2233333455567777765431 145778889999998753
Q ss_pred cceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 284 DMELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 284 ~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.++.|+++++.++++.+.+++..-+|++|.
T Consensus 313 ~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 313 ITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred EEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 246799999999999999875432399873
No 95
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6.2e-36 Score=261.95 Aligned_cols=296 Identities=28% Similarity=0.352 Sum_probs=246.6
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--------
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-------- 74 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-------- 74 (314)
+.+.|.+.+++|+|++.++++|.+|+....|..+....+|..+|||++|+|+++|+++..+++||+|++...
T Consensus 19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~ 98 (342)
T cd08266 19 DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEY 98 (342)
T ss_pred ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchh
Confidence 556677899999999999999999999888865433356889999999999999999999999999998732
Q ss_pred ------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcH
Q 021311 75 ------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 136 (314)
Q Consensus 75 ------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ 136 (314)
..|++++|+.++.+.++++|++++++++++++..+.+||+++.+..++.++++++|+|+++.
T Consensus 99 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~ 178 (342)
T cd08266 99 CLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSG 178 (342)
T ss_pred hccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCch
Confidence 25789999999999999999999999999999999999999988889999999999999899
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHH
Q 021311 137 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLK 215 (314)
Q Consensus 137 ~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~ 215 (314)
+|++++++++..|++++.+.+ ++++.+.+..++.+.+++..+. ..+.+...+.+.+ +|++++++|...+...++
T Consensus 179 iG~~~~~~~~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~g~~~~~~~~~ 253 (342)
T cd08266 179 VGSAAIQIAKLFGATVIATAG----SEDKLERAKELGADYVIDYRKEDFVREVRELTGKRG-VDVVVEHVGAATWEKSLK 253 (342)
T ss_pred HHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC-CcEEEECCcHHHHHHHHH
Confidence 999999999999999888774 5677778888888877776553 3355666666554 999999999988889999
Q ss_pred hcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHH
Q 021311 216 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQ 294 (314)
Q Consensus 216 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~ 294 (314)
+++++|+++.++........+.....+.+++++.+..... ...+..+++++.++.+.+. ++.|++++++
T Consensus 254 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 323 (342)
T cd08266 254 SLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT----------KAELDEALRLVFRGKLKPVIDSVFPLEEAA 323 (342)
T ss_pred HhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC----------HHHHHHHHHHHHcCCcccceeeeEcHHHHH
Confidence 9999999999986554333333334566788888875432 2467788899999988764 5689999999
Q ss_pred HHHHHHhccCCCCCceEeeC
Q 021311 295 TALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 295 ~a~~~~~~~~~~~~k~vi~~ 314 (314)
++++.+.+++..+ |+++++
T Consensus 324 ~a~~~~~~~~~~~-kvv~~~ 342 (342)
T cd08266 324 EAHRRLESREQFG-KIVLTP 342 (342)
T ss_pred HHHHHHHhCCCCc-eEEEeC
Confidence 9999999887777 999864
No 96
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.9e-36 Score=267.68 Aligned_cols=292 Identities=20% Similarity=0.272 Sum_probs=230.8
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCC------CCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~------~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-- 73 (314)
+++|.|++++++|+||+.++++|++|++...+.. +..+.+|.++|||++|+|+++|++++.|++||+|++.+
T Consensus 42 ~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 121 (384)
T cd08265 42 EDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMM 121 (384)
T ss_pred EECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCC
Confidence 5789999999999999999999999998876321 22235688999999999999999999999999998621
Q ss_pred ------------------------CCCCcccceEeeeccceEEcCCC-------CCHHHhhcccccHHHHHHHHHHh-hc
Q 021311 74 ------------------------PSSGTWQSYVVKDQSVWHKVSKD-------SPMEYAATIIVNPLTALRMLEDF-TT 121 (314)
Q Consensus 74 ------------------------~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~~~~~~~ta~~~l~~~-~~ 121 (314)
..+|+|++|+.++++.++++|++ ++.+ +++++.++++||+++... .+
T Consensus 122 ~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~ 200 (384)
T cd08265 122 WCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGG 200 (384)
T ss_pred CCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCC
Confidence 01589999999999999999986 3455 555666889999999765 68
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecCh----hhHHHHHHHhcCCC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKNVKGLLANLP 196 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~----~~~~~i~~~~~~~g 196 (314)
+++|++|+|+|+ |++|++++++|+..|+. ++++.. ++++.+.++++|+++++++++ .+.+.+++++.+++
T Consensus 201 ~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~----~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~g 275 (384)
T cd08265 201 FRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEI----SEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWG 275 (384)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC----CHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCC
Confidence 999999999975 99999999999999994 665553 566888889999999988763 34466888887776
Q ss_pred CCcEEEecCCCc--cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHH
Q 021311 197 EPALGFNCVGGN--SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLC 274 (314)
Q Consensus 197 ~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (314)
+|+++||.|.. ....++++|+++|+++.+|.... ...+.......+..++.+.+... ....++++++
T Consensus 276 -vDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~ 344 (384)
T cd08265 276 -ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS---------GHGIFPSVIK 344 (384)
T ss_pred -CCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC---------CcchHHHHHH
Confidence 99999999974 45888999999999999985432 23333344445566777664211 1245788999
Q ss_pred HHHcCCcccc---ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 275 LAREGKLKYD---MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 275 ~l~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
++.++.+.+. ++.|+++++++|++.+.++ ..+ |+|+
T Consensus 345 ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-kvvv 383 (384)
T cd08265 345 LMASGKIDMTKIITARFPLEGIMEAIKAASER-TDG-KITI 383 (384)
T ss_pred HHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCc-eEEe
Confidence 9999999863 5679999999999997664 455 8775
No 97
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.7e-36 Score=262.65 Aligned_cols=282 Identities=26% Similarity=0.352 Sum_probs=228.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++.+.|+++++||+||+.++++|++|+....+. +. ..+|..+|||++|+|+.+|++++.+++||+|++...
T Consensus 17 ~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~ 94 (325)
T cd08264 17 EDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCD 94 (325)
T ss_pred EeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCCh
Confidence 356677889999999999999999998887642 21 135778999999999999999999999999997632
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.. ++++++++++|+|++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g 173 (325)
T cd08264 95 MCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASG 173 (325)
T ss_pred hhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCc
Confidence 25899999999999999999999999999999999999999976 8999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 215 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~ 215 (314)
++|++++++|+.+|++++.+++ .+.++.+|++++++.++. .+.++.++ . ++|+++||+|......+++
T Consensus 174 ~vg~~~~~~a~~~G~~v~~~~~--------~~~~~~~g~~~~~~~~~~-~~~l~~~~--~-~~d~vl~~~g~~~~~~~~~ 241 (325)
T cd08264 174 NTGIFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEV-EEKVKEIT--K-MADVVINSLGSSFWDLSLS 241 (325)
T ss_pred hHHHHHHHHHHHcCCeEEEEeH--------HHHHHHhCCCeeecchHH-HHHHHHHh--C-CCCEEEECCCHHHHHHHHH
Confidence 9999999999999999877762 256677999888887653 44566666 3 4999999999877799999
Q ss_pred hcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccHHH
Q 021311 216 FLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQT 295 (314)
Q Consensus 216 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 295 (314)
+|+++|+++.+|........++...++.++.++.+...+. ++.++.+++++....+ ..++.|+++++++
T Consensus 242 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 310 (325)
T cd08264 242 VLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT----------RKELLELVKIAKDLKV-KVWKTFKLEEAKE 310 (325)
T ss_pred hhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC----------HHHHHHHHHHHHcCCc-eeEEEEcHHHHHH
Confidence 9999999999986433234445555666777777764321 2456667777754442 2356799999999
Q ss_pred HHHHHhccCCCCCce
Q 021311 296 ALSKALGLHGSQPKQ 310 (314)
Q Consensus 296 a~~~~~~~~~~~~k~ 310 (314)
|++.+.+++..+ |+
T Consensus 311 a~~~~~~~~~~~-kv 324 (325)
T cd08264 311 ALKELFSKERDG-RI 324 (325)
T ss_pred HHHHHHcCCCcc-cc
Confidence 999999877665 65
No 98
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.3e-36 Score=263.47 Aligned_cols=293 Identities=22% Similarity=0.286 Sum_probs=234.7
Q ss_pred CccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEee-CCC----
Q 021311 1 MIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP-SPP---- 74 (314)
Q Consensus 1 i~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~-~~~---- 74 (314)
+++.|.|+| +++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++..+++||+|++ +..
T Consensus 14 ~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 91 (345)
T cd08287 14 VEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGT 91 (345)
T ss_pred EEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCC
Confidence 357788886 8999999999999999999988887653 45789999999999999999999999999987 221
Q ss_pred ---------------------CCCcccceEeeecc--ceEEcCCCCCHHHhh-----cccccHHHHHHHHHHhhcCCCCC
Q 021311 75 ---------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAA-----TIIVNPLTALRMLEDFTTLNSGD 126 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~ 126 (314)
..|+|++|+.++.+ .++++|++++++.+. ++...+.+||+++. .+++++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~-~~~~~~g~ 170 (345)
T cd08287 92 CPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAV-SAGVRPGS 170 (345)
T ss_pred ChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHH-hcCCCCCC
Confidence 13889999999964 999999999883221 22256888999985 58899999
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCV 205 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~ 205 (314)
+++|.|+ |++|++++++|+..|++++++++. ++++.+.++++|+++++++.+. ..+.+.+.+++.+ +|+++||+
T Consensus 171 ~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~~---~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~-~d~il~~~ 245 (345)
T cd08287 171 TVVVVGD-GAVGLCAVLAAKRLGAERIIAMSR---HEDRQALAREFGATDIVAERGEEAVARVRELTGGVG-ADAVLECV 245 (345)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCC-CCEEEECC
Confidence 9999775 999999999999999986555543 5677888899999999998765 3466777777666 99999999
Q ss_pred CCc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc-
Q 021311 206 GGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY- 283 (314)
Q Consensus 206 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~- 283 (314)
|+. ....++++++++|+++.+|.... +..++....+.+++++.+... ...+.++++++++.++.+++
T Consensus 246 g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~ 314 (345)
T cd08287 246 GTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPA----------PVRRYLPELLDDVLAGRINPG 314 (345)
T ss_pred CCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecC----------CcHHHHHHHHHHHHcCCCCHH
Confidence 874 45899999999999999985542 333444345678888877422 23457888999999999886
Q ss_pred --cceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 284 --DMELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 284 --~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++.+++++++++++.+.+.+. . |++|++
T Consensus 315 ~~~~~~~~l~~~~~a~~~~~~~~~-~-k~~~~~ 345 (345)
T cd08287 315 RVFDLTLPLDEVAEGYRAMDERRA-I-KVLLRP 345 (345)
T ss_pred HhEEeeecHHHHHHHHHHHhCCCc-e-EEEeCC
Confidence 3567999999999999887654 3 999864
No 99
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-35 Score=259.61 Aligned_cols=297 Identities=25% Similarity=0.313 Sum_probs=238.6
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
++.+.|.|.+++|+|++.++++|+.|+....+.++..+.+|..+|||++|+|+.+|+++..|++||+|.++.. .|+|++
T Consensus 18 ~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-~g~~~~ 96 (331)
T cd08273 18 VEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR-VGGNAE 96 (331)
T ss_pred eccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC-Ccceee
Confidence 4668888999999999999999999999888876543356889999999999999999999999999999863 389999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|+.++.+.++++|+++++++++.++.++.+||+++.+.+++.++++++|+|++|.+|++++++|+..|++++.++
T Consensus 97 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~----- 171 (331)
T cd08273 97 YINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA----- 171 (331)
T ss_pred EEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEe-----
Confidence 999999999999999999999999999999999998888999999999999999999999999999999988887
Q ss_pred cHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCc-ccc--c
Q 021311 162 SDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI-TVS--T 238 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~--~ 238 (314)
++++.+.++.+|+.. ++......... .... . ++|+++||+++.....++++++++|+++.+|.....+. ... +
T Consensus 172 ~~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~-~-~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 247 (331)
T cd08273 172 SERNHAALRELGATP-IDYRTKDWLPA-MLTP-G-GVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAA 247 (331)
T ss_pred CHHHHHHHHHcCCeE-EcCCCcchhhh-hccC-C-CceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCccccccc
Confidence 366777888899754 44443222111 2233 2 49999999999888899999999999999985543221 111 0
Q ss_pred ------------ccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCC
Q 021311 239 ------------SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHG 305 (314)
Q Consensus 239 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~ 305 (314)
...+.+++++.+.+. + ...++....+.++.+++++++|.+.+. ++.+++++++++++.+.+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 324 (331)
T cd08273 248 LGSLLARLAKLKLLPTGRRATFYYVWR--D-RAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKV 324 (331)
T ss_pred hhhhhhhhhhhcceeccceeEEEeech--h-cccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCC
Confidence 111223344444333 1 223456667889999999999999864 568999999999999998887
Q ss_pred CCCceEe
Q 021311 306 SQPKQVI 312 (314)
Q Consensus 306 ~~~k~vi 312 (314)
.+ |+|+
T Consensus 325 ~g-kvv~ 330 (331)
T cd08273 325 VG-KIVL 330 (331)
T ss_pred cc-eEEe
Confidence 77 8775
No 100
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-35 Score=257.46 Aligned_cols=304 Identities=29% Similarity=0.388 Sum_probs=253.8
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC----CCCc
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSGT 78 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----~~g~ 78 (314)
+.+.|.+++++|+|+|.++++|+.|.....+.+...+.+|..+|||++|+|+.+|+++..+++||+|.++.. ..|+
T Consensus 19 ~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~ 98 (328)
T cd08268 19 ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGT 98 (328)
T ss_pred ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccccCCCcc
Confidence 456677899999999999999999998887766544456789999999999999999999999999998753 2489
Q ss_pred ccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 79 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 79 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
+++|+.++.+.++++|+++++..++.++.++.+||+++.....+.++++++|+|++|.+|++++++++..|++++.+++
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~- 177 (328)
T cd08268 99 YAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTR- 177 (328)
T ss_pred ceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC-
Confidence 9999999999999999999999999999999999999988889999999999999999999999999999999888874
Q ss_pred CCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccc
Q 021311 159 RAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237 (314)
Q Consensus 159 ~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 237 (314)
+.++.+.++.+|.+.+++.+... ...+...+.+.+ +|++++|.++.....++++++++|+++.+|........++
T Consensus 178 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 253 (328)
T cd08268 178 ---TSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKG-VDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFP 253 (328)
T ss_pred ---CHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCC-ceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCCCCCc
Confidence 56777788888988888776543 355666666655 9999999999777889999999999999985443323333
Q ss_pred cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 238 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
....+.+++++.+..+.... ..+......++.+.+++.++.+.+. +..|+++++.++++.+.+++..+ |+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vv~~~ 328 (328)
T cd08268 254 LKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIG-KIVVTP 328 (328)
T ss_pred hHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCc-eEEEeC
Confidence 34356788988887765432 3456677788888888989988765 56799999999999999887777 998864
No 101
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.5e-35 Score=257.65 Aligned_cols=305 Identities=24% Similarity=0.282 Sum_probs=251.7
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.+.|.+++++|+|++.++++|+.|+....+.++....+|..+|||++|+|+.+|+.+..+++||+|.++.. .|+|++|
T Consensus 19 ~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~-~~~~~~~ 97 (325)
T TIGR02824 19 EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA-GGGYAEY 97 (325)
T ss_pred eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccC-CCcceeE
Confidence 344556889999999999999999998887766543356789999999999999999999999999999853 3899999
Q ss_pred EeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc
Q 021311 83 VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162 (314)
Q Consensus 83 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~ 162 (314)
+.++.+.++++|+++++..+++++.++.+||+++.+...++++++++|+|++|.+|++++++++..|++++.+.+ +
T Consensus 98 ~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~----~ 173 (325)
T TIGR02824 98 VAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAG----S 173 (325)
T ss_pred EEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeC----C
Confidence 999999999999999999999999999999999888899999999999999999999999999999999988874 5
Q ss_pred HHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccc
Q 021311 163 DEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAF 241 (314)
Q Consensus 163 ~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 241 (314)
+++.+.++.+|.+.+++.... ..+.++....+.+ +|++++|+|+.....++++++++|+++.+|........+++..+
T Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 252 (325)
T TIGR02824 174 DEKCAACEALGADIAINYREEDFVEVVKAETGGKG-VDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPL 252 (325)
T ss_pred HHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCC-eEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHH
Confidence 667777788998888776653 3355776666555 99999999987778899999999999999854322223444445
Q ss_pred eecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 242 IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+.+++++.+...........+......+..+++++.++.+.+. ++.+++++++++++.+.+++..+ |+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~ 325 (325)
T TIGR02824 253 LAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIG-KIVLTV 325 (325)
T ss_pred HhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcc-eEEEeC
Confidence 5789999998765432222334455677888999999988754 67799999999999999887777 998864
No 102
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.6e-36 Score=263.21 Aligned_cols=293 Identities=24% Similarity=0.277 Sum_probs=230.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------ 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------ 73 (314)
++.+.|+++++||+||+.++++|++|+....+.... ...+|.++|||++|+|+++|+++..|++||+|++..
T Consensus 32 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 111 (364)
T PLN02702 32 QPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWR 111 (364)
T ss_pred EeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCC
Confidence 466778889999999999999999999988763211 113577899999999999999999999999998721
Q ss_pred ---------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcC
Q 021311 74 ---------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 132 (314)
Q Consensus 74 ---------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g 132 (314)
...|+|++|++++.+.++++|++++++++++. .++.++|+++ +..++.++++++|+|
T Consensus 112 c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g 189 (364)
T PLN02702 112 CNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMG 189 (364)
T ss_pred CcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC
Confidence 11489999999999999999999999988763 2456688887 568899999999997
Q ss_pred CCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC---hhhHHHHHHH--hcCCCCCcEEEecCCC
Q 021311 133 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES---QLEVKNVKGL--LANLPEPALGFNCVGG 207 (314)
Q Consensus 133 ~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~---~~~~~~i~~~--~~~~g~~d~v~d~~g~ 207 (314)
+ |++|++++++|+.+|++.+++++. ++++.+.++++|++.++++. ....+.+..+ ..+. ++|++|||.|+
T Consensus 190 ~-g~vG~~~~~~a~~~G~~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~ 264 (364)
T PLN02702 190 A-GPIGLVTMLAARAFGAPRIVIVDV---DDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGG-GIDVSFDCVGF 264 (364)
T ss_pred C-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCC-CCCEEEECCCC
Confidence 6 999999999999999987666653 67788888999999887653 2233445443 2233 49999999995
Q ss_pred -ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---
Q 021311 208 -NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY--- 283 (314)
Q Consensus 208 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--- 283 (314)
.....++++++++|+++.+|.... ...+.......+++++.+++.. ...++.++++++++.+.+
T Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~ 332 (364)
T PLN02702 265 NKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRY-----------RNTWPLCLEFLRSGKIDVKPL 332 (364)
T ss_pred HHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccC-----------hHHHHHHHHHHHcCCCCchHh
Confidence 556899999999999999995433 2334445566788888886532 134677899999998863
Q ss_pred cceeecc--ccHHHHHHHHhccCCCCCceEeeC
Q 021311 284 DMELVPF--NNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 284 ~~~~~~~--~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++.|++ +++++|++.+.+++..+ |++|.+
T Consensus 333 ~~~~~~l~~~~~~~a~~~~~~~~~~~-kvv~~~ 364 (364)
T PLN02702 333 ITHRFGFSQKEVEEAFETSARGGNAI-KVMFNL 364 (364)
T ss_pred eEEEeccChHHHHHHHHHHhcCCCce-EEEEeC
Confidence 2456555 79999999999887766 999863
No 103
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=6.7e-36 Score=261.78 Aligned_cols=293 Identities=23% Similarity=0.274 Sum_probs=229.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCC-C-CCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-P-VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~-~-~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----- 74 (314)
.++|.|.|+++||+||+.++++|++|+.++.+.. . ....+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 16 ~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 95 (341)
T PRK05396 16 TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGH 95 (341)
T ss_pred EECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCC
Confidence 5778899999999999999999999998765531 1 12246788999999999999999999999999998621
Q ss_pred ---------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 75 ---------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
..|+|++|+.++.+.++++|+++++++++++ ..+.++++++.. ...+|++|+|.|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~ 172 (341)
T PRK05396 96 CRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGA 172 (341)
T ss_pred ChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECC
Confidence 2589999999999999999999999988754 466777766543 3468999999876
Q ss_pred CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCcc-HH
Q 021311 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-AS 211 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~-~~ 211 (314)
|++|++++++|+.+|++.+.+++ .++++.+.++++|+++++++++.. .+.++.++.+.+ +|++|||.|+.. ..
T Consensus 173 -g~vg~~~~~la~~~G~~~v~~~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~d~v~d~~g~~~~~~ 247 (341)
T PRK05396 173 -GPIGIMAAAVAKHVGARHVVITD---VNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG-FDVGLEMSGAPSAFR 247 (341)
T ss_pred -CHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC-CCEEEECCCCHHHHH
Confidence 99999999999999995444443 367888888999999999887654 355777776665 999999998754 58
Q ss_pred HHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcC-Ccccc-ceeec
Q 021311 212 KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG-KLKYD-MELVP 289 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~~~~~-~~~~~ 289 (314)
..+++++++|+++.+|... ...++....++.+++++.++.... ....+..+++++.++ ++.+. ++.++
T Consensus 248 ~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (341)
T PRK05396 248 QMLDNMNHGGRIAMLGIPP-GDMAIDWNKVIFKGLTIKGIYGRE---------MFETWYKMSALLQSGLDLSPIITHRFP 317 (341)
T ss_pred HHHHHHhcCCEEEEEecCC-CCCcccHHHHhhcceEEEEEEccC---------ccchHHHHHHHHHcCCChhHheEEEEe
Confidence 8999999999999998543 223333455666788887764211 113345677888888 34333 46799
Q ss_pred cccHHHHHHHHhccCCCCCceEeeC
Q 021311 290 FNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++++|+.+.+++ .+ |++++|
T Consensus 318 l~~~~~a~~~~~~~~-~g-k~vv~~ 340 (341)
T PRK05396 318 IDDFQKGFEAMRSGQ-SG-KVILDW 340 (341)
T ss_pred HHHHHHHHHHHhcCC-Cc-eEEEec
Confidence 999999999999876 66 999876
No 104
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-35 Score=257.93 Aligned_cols=302 Identities=23% Similarity=0.294 Sum_probs=250.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC----CCC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSG 77 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----~~g 77 (314)
++.+.|.+.+++|+|++.++++|+.|.....+.....+..|..+|||++|+|+.+|+++..+++||+|.++.. ..|
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g 97 (326)
T cd08272 18 REVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQG 97 (326)
T ss_pred eecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCC
Confidence 3556677899999999999999999999887765433346789999999999999999999999999999752 147
Q ss_pred cccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 78 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 78 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
+|++|+.++.+.++++|+++++..++.++..+.+||+++.+.++++++++++|+|+++.+|++++++++..|++++.+++
T Consensus 98 ~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~ 177 (326)
T cd08272 98 SLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATAS 177 (326)
T ss_pred ceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEec
Confidence 89999999999999999999999999999999999999888899999999999999899999999999999999988873
Q ss_pred CCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccc
Q 021311 158 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237 (314)
Q Consensus 158 ~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 237 (314)
+ ++.+.++.+|.+.+++......+.++..+.+.+ +|+++||.++......+++++++|+++.++... ...+.
T Consensus 178 ----~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~--~~~~~ 249 (326)
T cd08272 178 ----S-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGETLDASFEAVALYGRVVSILGGA--THDLA 249 (326)
T ss_pred ----h-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCC-CcEEEECCChHHHHHHHHHhccCCEEEEEecCC--ccchh
Confidence 5 777888889998888876654456777777666 999999999877788999999999999998543 22222
Q ss_pred cccceecceEEEEEechh-hccccCHHHHHHHHHHHHHHHHcCCcccc-c-eeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 238 TSAFIFKDLSLKGFWLQK-WLSSEKATECRNMIDYLLCLAREGKLKYD-M-ELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~-~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
....+++++.+..+.. +....++......++.+++++.++.+.+. + +.|++++++++++.+.+++..+ |+++++
T Consensus 250 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vv~~~ 326 (326)
T cd08272 250 --PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARG-KIVIDV 326 (326)
T ss_pred --hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCccc-EEEEEC
Confidence 2235778888776432 11223455566788999999999998865 3 7899999999999999887777 999875
No 105
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-35 Score=257.94 Aligned_cols=281 Identities=25% Similarity=0.285 Sum_probs=229.9
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--------
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-------- 74 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-------- 74 (314)
+.+.|.++++||+||+.++++|++|+....|.++. ..+|..+|||++|+|+++|+++.++++||+|.+.+.
T Consensus 21 ~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~ 99 (329)
T cd08298 21 EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECR 99 (329)
T ss_pred eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCCh
Confidence 56667789999999999999999999998887654 356889999999999999999999999999986210
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
.+|+|++|+.++.+.++++|+++++.+++.++.++.|||+++ +.++++++++++|+|+ |
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~-g 177 (329)
T cd08298 100 YCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGF-G 177 (329)
T ss_pred hHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECC-c
Confidence 158999999999999999999999999999999999999999 7799999999999985 9
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC-ccHHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASKVL 214 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~~ 214 (314)
++|++++++++..|++++++++ ++++++.++++|++++++.... .+. ++|+++++.+. ..+..++
T Consensus 178 ~vg~~~~~la~~~g~~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~---------~~~-~vD~vi~~~~~~~~~~~~~ 243 (329)
T cd08298 178 ASAHLALQIARYQGAEVFAFTR----SGEHQELARELGADWAGDSDDL---------PPE-PLDAAIIFAPVGALVPAAL 243 (329)
T ss_pred HHHHHHHHHHHHCCCeEEEEcC----ChHHHHHHHHhCCcEEeccCcc---------CCC-cccEEEEcCCcHHHHHHHH
Confidence 9999999999999999988874 6678888899999888876542 123 49999998665 4458999
Q ss_pred HhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccHH
Q 021311 215 KFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNFQ 294 (314)
Q Consensus 215 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~ 294 (314)
++++++|+++.+|........++... +.++..+.+.... ..+.++.+++++.++.+++.++.|++++++
T Consensus 244 ~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 312 (329)
T cd08298 244 RAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL----------TRQDGEEFLKLAAEIPIKPEVETYPLEEAN 312 (329)
T ss_pred HHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC----------CHHHHHHHHHHHHcCCCCceEEEEeHHHHH
Confidence 99999999998874322111122222 3355566554321 224578888999999988777889999999
Q ss_pred HHHHHHhccCCCCCceEe
Q 021311 295 TALSKALGLHGSQPKQVI 312 (314)
Q Consensus 295 ~a~~~~~~~~~~~~k~vi 312 (314)
+|++.+.+++..+ |+|+
T Consensus 313 ~a~~~~~~~~~~~-~~v~ 329 (329)
T cd08298 313 EALQDLKEGRIRG-AAVL 329 (329)
T ss_pred HHHHHHHcCCCcc-eeeC
Confidence 9999999988887 8764
No 106
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.4e-35 Score=257.17 Aligned_cols=292 Identities=25% Similarity=0.279 Sum_probs=230.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCC--CCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------ 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~--~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------ 73 (314)
++.|.|.|+++||+||+.++++|+.|+.++.+... ....+|.++|+|++|+|+.+|++++.+++||+|++..
T Consensus 14 ~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 93 (340)
T TIGR00692 14 TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGK 93 (340)
T ss_pred EECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCC
Confidence 57788899999999999999999999987655311 1113567899999999999999999999999998831
Q ss_pred --------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 74 --------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 74 --------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
...|+|++|++++++.++++|++++.+++ +++.++.+||+++ ....++|++++|.|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~ 170 (340)
T TIGR00692 94 CYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGA 170 (340)
T ss_pred ChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECC
Confidence 02589999999999999999999998655 5667889999887 355789999999875
Q ss_pred CcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCc-cH
Q 021311 134 TSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGN-SA 210 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~-~~ 210 (314)
|.+|++++++|+.+|++ ++++ + +++++.+.++++|+++++++.+. ..+.+.+++++.+ +|+++||.|+. ..
T Consensus 171 -g~vg~~a~~la~~~G~~~v~~~-~---~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~-~d~vld~~g~~~~~ 244 (340)
T TIGR00692 171 -GPIGLMAIAVAKASGAYPVIVS-D---PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG-VDVFLEMSGAPKAL 244 (340)
T ss_pred -CHHHHHHHHHHHHcCCcEEEEE-C---CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCC-CCEEEECCCCHHHH
Confidence 99999999999999997 5555 3 37888888899999888887654 3466777776665 99999998864 45
Q ss_pred HHHHHhcccCCEEEEEcCCCCCCcccccc-cceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---cce
Q 021311 211 SKVLKFLSQGGTMVTYGGMSKKPITVSTS-AFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DME 286 (314)
Q Consensus 211 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~ 286 (314)
...+++|+++|+++.+|.... ..++... .++.+++++.+.... ...+.+..++++++++.+++ .++
T Consensus 245 ~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~ 314 (340)
T TIGR00692 245 EQGLQAVTPGGRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITGR---------HMFETWYTVSRLIQSGKLDLDPIITH 314 (340)
T ss_pred HHHHHhhcCCCEEEEEccCCC-CcccchhhhhhhcceEEEEEecC---------CchhhHHHHHHHHHcCCCChHHheee
Confidence 888999999999999986432 2222222 445567777665421 11245678899999999873 356
Q ss_pred eeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 287 LVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 287 ~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
.++++++.++++.+.+++ .| |+|++|
T Consensus 315 ~~~l~~~~~a~~~~~~~~-~g-kvvv~~ 340 (340)
T TIGR00692 315 KFKFDKFEKGFELMRSGQ-TG-KVILSL 340 (340)
T ss_pred eeeHHHHHHHHHHHhcCC-Cc-eEEEeC
Confidence 799999999999999876 46 999986
No 107
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.5e-35 Score=257.29 Aligned_cols=275 Identities=21% Similarity=0.260 Sum_probs=223.0
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC-------
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------- 73 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------- 73 (314)
+++++.|+++++||+||+.++++|++|.....+.++ +|.++|||++|+|+++|++ +++||+|....
T Consensus 14 ~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~ 86 (319)
T cd08242 14 VEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRC 86 (319)
T ss_pred EEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCC
Confidence 357899999999999999999999999998888654 4789999999999999998 67999997421
Q ss_pred --------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 74 --------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 74 --------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
..+|+|++|++++.+.++++|++++.++++.+ .+..++|..+ +..+++++++|||+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~ 164 (319)
T cd08242 87 EYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPITPGDKVAVLGD 164 (319)
T ss_pred hhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC
Confidence 12589999999999999999999999988864 3455666655 5588999999999985
Q ss_pred CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCc-cHHH
Q 021311 134 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASK 212 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~-~~~~ 212 (314)
|.+|++++|+|+.+|+++++++. ++++++.++++|++.+++++.. +.+. ++|+++||.|+. ....
T Consensus 165 -g~vg~~~~q~a~~~G~~vi~~~~----~~~~~~~~~~~g~~~~~~~~~~--------~~~~-~~d~vid~~g~~~~~~~ 230 (319)
T cd08242 165 -GKLGLLIAQVLALTGPDVVLVGR----HSEKLALARRLGVETVLPDEAE--------SEGG-GFDVVVEATGSPSGLEL 230 (319)
T ss_pred -CHHHHHHHHHHHHcCCeEEEEcC----CHHHHHHHHHcCCcEEeCcccc--------ccCC-CCCEEEECCCChHHHHH
Confidence 99999999999999999877763 6788899999999988877542 2334 499999999885 4588
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcc--c-cceeec
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLK--Y-DMELVP 289 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~--~-~~~~~~ 289 (314)
++++++++|+++..+... ....++...+..++.++.+.+... ++.+++++.+++++ + .++.|+
T Consensus 231 ~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~~~~~ 296 (319)
T cd08242 231 ALRLVRPRGTVVLKSTYA-GPASFDLTKAVVNEITLVGSRCGP-------------FAPALRLLRKGLVDVDPLITAVYP 296 (319)
T ss_pred HHHHhhcCCEEEEEcccC-CCCccCHHHheecceEEEEEeccc-------------HHHHHHHHHcCCCChhhceEEEEe
Confidence 899999999999876433 234445555667888888765421 57788999999984 3 257899
Q ss_pred cccHHHHHHHHhccCCCCCceEeeC
Q 021311 290 FNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
++++++||+.+.++. .+ |+||++
T Consensus 297 l~~~~~a~~~~~~~~-~~-k~vi~~ 319 (319)
T cd08242 297 LEEALEAFERAAEPG-AL-KVLLRP 319 (319)
T ss_pred HHHHHHHHHHHhcCC-ce-EEEeCC
Confidence 999999999998765 45 999864
No 108
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=3.1e-35 Score=256.41 Aligned_cols=293 Identities=25% Similarity=0.299 Sum_probs=236.2
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTW 79 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~ 79 (314)
++++.|++.+++|+||+.++++|+.|.....+.... +...+..+|+|++|+|+++|++ .+++||+|+++ ++|
T Consensus 23 ~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~----~~~ 96 (329)
T cd05288 23 VEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF----LGW 96 (329)
T ss_pred EeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc----cce
Confidence 567888899999999999999999887655543211 1123467899999999999964 79999999986 489
Q ss_pred cceEeeec-cceEEcCCCCC--HHHhhc-ccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEE
Q 021311 80 QSYVVKDQ-SVWHKVSKDSP--MEYAAT-IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 155 (314)
Q Consensus 80 ~~~~~~~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~ 155 (314)
++|+.++. +.++++|++++ +..++. +++++.|||+++.+...+.++++|||+|++|.+|++++++|+..|++++.+
T Consensus 97 ~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~ 176 (329)
T cd05288 97 QEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGI 176 (329)
T ss_pred EEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEE
Confidence 99999999 99999999995 555555 888999999999887889999999999988999999999999999998888
Q ss_pred ecCCCCcHHHHHHHHh-CCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC
Q 021311 156 IRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP 233 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~~-lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 233 (314)
++ ++++.+.+++ +|++.++++++. ..+.+..+++ . ++|++|||+|+.....++++++++|+++.+|......
T Consensus 177 ~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 250 (329)
T cd05288 177 AG----SDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-D-GIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYN 250 (329)
T ss_pred eC----CHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-C-CceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcc
Confidence 74 6778888887 999999988764 3456776664 3 4999999999987889999999999999998654332
Q ss_pred cc-----cccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCC
Q 021311 234 IT-----VSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQ 307 (314)
Q Consensus 234 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~ 307 (314)
.. +.....+.+++++.++.+..+ .....+.+..+++++.+|.+++. ...++++++.++++.+.+++..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~g 325 (329)
T cd05288 251 ATEPPGPKNLGNIITKRLTMQGFIVSDY-----ADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTG 325 (329)
T ss_pred cccccccccHHHHhhCcceEEeecchhh-----HHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCcc
Confidence 21 223445568888888765432 12345678889999999998864 45689999999999999887776
Q ss_pred CceEe
Q 021311 308 PKQVI 312 (314)
Q Consensus 308 ~k~vi 312 (314)
|+++
T Consensus 326 -kvvv 329 (329)
T cd05288 326 -KLVV 329 (329)
T ss_pred -ceeC
Confidence 8764
No 109
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.8e-35 Score=255.78 Aligned_cols=286 Identities=24% Similarity=0.327 Sum_probs=231.4
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
.+.+.|++.++||+||+.++++|+.|+....|.++. .+|..+|+|++|+|+++|+.++.+++||+|++...
T Consensus 15 ~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 92 (334)
T cd08234 15 EEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECF 92 (334)
T ss_pred EeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCc
Confidence 467889999999999999999999999998887653 36889999999999999999999999999987210
Q ss_pred -------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCc
Q 021311 75 -------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 135 (314)
Q Consensus 75 -------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g 135 (314)
..|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ ..++++++++|||+|+ |
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~-g 169 (334)
T cd08234 93 YCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGA-G 169 (334)
T ss_pred cccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-C
Confidence 2589999999999999999999999998876 6788999998 6689999999999986 9
Q ss_pred HHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEEEecChhhH-HHHHHHhcCCCCCcEEEecCCCc-cHHH
Q 021311 136 IVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGN-SASK 212 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~i~~~~~~~g~~d~v~d~~g~~-~~~~ 212 (314)
.+|++++++|+..|++ ++++.+ ++++.+.++++|.+.++++.+... .+ ..+.+.+ +|++|||.+.. ....
T Consensus 170 ~vg~~~~~la~~~G~~~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~-vd~v~~~~~~~~~~~~ 242 (334)
T cd08234 170 PIGLLLAQLLKLNGASRVTVAEP----NEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYG-FDVVIEATGVPKTLEQ 242 (334)
T ss_pred HHHHHHHHHHHHcCCcEEEEECC----CHHHHHHHHHhCCeEEecCCCCCHHHH--HHhcCCC-CcEEEECCCChHHHHH
Confidence 9999999999999998 555552 677788888899988888765432 22 3444444 99999999864 4588
Q ss_pred HHHhcccCCEEEEEcCCCC-CCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc---ceee
Q 021311 213 VLKFLSQGGTMVTYGGMSK-KPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD---MELV 288 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---~~~~ 288 (314)
.+++|+++|+++.+|.... ...++.....+.+++++.+.... ...++.+++++.++++.+. ...+
T Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~ 311 (334)
T cd08234 243 AIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-----------PYTFPRAIALLESGKIDVKGLVSHRL 311 (334)
T ss_pred HHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-----------HHHHHHHHHHHHcCCCChhhhEEEEe
Confidence 8999999999999985443 12333333334467777776431 2357888899999998752 4679
Q ss_pred ccccHHHHHHHHhccCCCCCceEe
Q 021311 289 PFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 289 ~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
++++++++++.+.+ +..+ |+|+
T Consensus 312 ~~~~~~~a~~~~~~-~~~~-k~vi 333 (334)
T cd08234 312 PLEEVPEALEGMRS-GGAL-KVVV 333 (334)
T ss_pred cHHHHHHHHHHHhc-CCce-EEEe
Confidence 99999999999998 6666 8876
No 110
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.3e-35 Score=255.60 Aligned_cols=288 Identities=26% Similarity=0.302 Sum_probs=236.7
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCC--------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------- 73 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------- 73 (314)
++.|.|.+.+++|+|++.++++|++|+....+.++. ..+|..+|||++|+|+++|+.++.+++||+|+...
T Consensus 15 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~ 93 (330)
T cd08245 15 EEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRC 93 (330)
T ss_pred EeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCC
Confidence 577888899999999999999999999998887643 35688999999999999999999999999998421
Q ss_pred -------------------CCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 74 -------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 74 -------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
...|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.. .+++++++|||+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~- 171 (330)
T cd08245 94 EYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGI- 171 (330)
T ss_pred hhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-
Confidence 025899999999999999999999999999999999999999976 78999999999976
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC-ccHHHH
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASKV 213 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~ 213 (314)
|.+|++++++|+..|++++++++ ++++.+.++++|++.+++...... ... .. . ++|+++||.+. .....+
T Consensus 172 g~iG~~~~~~a~~~G~~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~-~-~~d~vi~~~~~~~~~~~~ 242 (330)
T cd08245 172 GGLGHLAVQYARAMGFETVAITR----SPDKRELARKLGADEVVDSGAELD--EQA-AA-G-GADVILVTVVSGAAAEAA 242 (330)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhCCcEEeccCCcch--HHh-cc-C-CCCEEEECCCcHHHHHHH
Confidence 77999999999999999888874 677788888899988887654332 111 22 2 49999999875 455889
Q ss_pred HHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccccceeeccccH
Q 021311 214 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMELVPFNNF 293 (314)
Q Consensus 214 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 293 (314)
+++++++|+++.++.............++.++.++.++.... .+.++.+++++.++.+.+.++.++++++
T Consensus 243 ~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~~l~~~~~~~~~~~~ 312 (330)
T cd08245 243 LGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG----------RADLQEALDFAAEGKVKPMIETFPLDQA 312 (330)
T ss_pred HHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC----------HHHHHHHHHHHHcCCCcceEEEEcHHHH
Confidence 999999999999985433322222334556777887775432 2467788899999999877788999999
Q ss_pred HHHHHHHhccCCCCCceEe
Q 021311 294 QTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 294 ~~a~~~~~~~~~~~~k~vi 312 (314)
+++|+.+.+++..+ |+|+
T Consensus 313 ~~a~~~~~~~~~~~-~~v~ 330 (330)
T cd08245 313 NEAYERMEKGDVRF-RFVL 330 (330)
T ss_pred HHHHHHHHcCCCCc-ceeC
Confidence 99999999988887 8774
No 111
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9e-36 Score=262.01 Aligned_cols=302 Identities=27% Similarity=0.303 Sum_probs=230.5
Q ss_pred CccCCCCCC-CCCcEEEEEEeecCChhhhhhhccCCC--------------CCCCCCccCCcceEEEEEEecCCCCCCCC
Q 021311 1 MIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------------VRPKVPAVGGYEGVGEVYSVGSAVTRLAP 65 (314)
Q Consensus 1 i~~~~~p~~-~~~eV~v~v~~~~i~~~D~~~~~~~~~--------------~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 65 (314)
++|++.|+| +++||+|++.++++|+.|+....+... ....+|.++|||++|+|+.+|+++..+++
T Consensus 18 ~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~ 97 (350)
T cd08248 18 LENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEI 97 (350)
T ss_pred ecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCC
Confidence 467888989 499999999999999999998877421 02356889999999999999999999999
Q ss_pred CCEEeeCCC--CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCC----CCEEEEcCCCcHHHH
Q 021311 66 GDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS----GDSIVQNGATSIVGQ 139 (314)
Q Consensus 66 Gd~V~~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlI~g~~g~~G~ 139 (314)
||+|++... ..|+|++|+.++++.++++|++++++.++.+++.+.|||+++.+.+.+.+ |++++|+|++|.+|+
T Consensus 98 Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~ 177 (350)
T cd08248 98 GDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177 (350)
T ss_pred CCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHH
Confidence 999998642 25899999999999999999999999999999999999999988777754 999999999899999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcc
Q 021311 140 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLS 218 (314)
Q Consensus 140 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~ 218 (314)
+++++|+.+|++++++++ .++.+.++.+|.+++++..+.. .+.+. ... ++|++|||.|+.....++++++
T Consensus 178 ~~~~~a~~~G~~v~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~l~---~~~-~vd~vi~~~g~~~~~~~~~~l~ 248 (350)
T cd08248 178 FAIQLLKAWGAHVTTTCS-----TDAIPLVKSLGADDVIDYNNEDFEEELT---ERG-KFDVILDTVGGDTEKWALKLLK 248 (350)
T ss_pred HHHHHHHHCCCeEEEEeC-----cchHHHHHHhCCceEEECCChhHHHHHH---hcC-CCCEEEECCChHHHHHHHHHhc
Confidence 999999999999888773 2466778889998888876532 23332 333 4999999999987789999999
Q ss_pred cCCEEEEEcCCCCCCc---ccccccceecceEEEEEechhhcc-----ccCHHHHHHHHHHHHHHHHcCCcccc-ceeec
Q 021311 219 QGGTMVTYGGMSKKPI---TVSTSAFIFKDLSLKGFWLQKWLS-----SEKATECRNMIDYLLCLAREGKLKYD-MELVP 289 (314)
Q Consensus 219 ~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~ 289 (314)
++|+++.+|....... .+.... +..++++.......... ..........++.+++++.+|.+.+. ++.|+
T Consensus 249 ~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 327 (350)
T cd08248 249 KGGTYVTLVSPLLKNTDKLGLVGGM-LKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFP 327 (350)
T ss_pred cCCEEEEecCCcccccccccccchh-hhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeec
Confidence 9999999985432111 010000 00111111000000000 00001124568889999999998765 56899
Q ss_pred cccHHHHHHHHhccCCCCCceEee
Q 021311 290 FNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
++++.++++.+.+++..+ |++++
T Consensus 328 ~~~~~~a~~~~~~~~~~~-~vv~~ 350 (350)
T cd08248 328 FEEVPEAYEKVESGHARG-KTVIK 350 (350)
T ss_pred HHHHHHHHHHHhcCCCce-EEEeC
Confidence 999999999999887766 88763
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.7e-34 Score=249.92 Aligned_cols=301 Identities=26% Similarity=0.314 Sum_probs=243.0
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--CCCcc
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTW 79 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--~~g~~ 79 (314)
+++|.|++.+++|+||+.++++|+.|+....+.+... ..|..+|||++|+|+.+|+.+..+++||+|.++.. ..|+|
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~ 96 (325)
T cd08271 18 EEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSF 96 (325)
T ss_pred eccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccc
Confidence 5678889999999999999999999998887765321 23678999999999999999999999999999841 14899
Q ss_pred cceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 80 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
++|+.++.+.++++|+++++.+++.+.+.+.+||+++.+.+++++|++++|+|+++.+|++++++++..|++++.++
T Consensus 97 ~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~--- 173 (325)
T cd08271 97 AEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC--- 173 (325)
T ss_pred eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE---
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999988776
Q ss_pred CCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccc
Q 021311 160 AGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST 238 (314)
Q Consensus 160 ~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 238 (314)
+.++.+.+..+|.+.+++.... ..+.++..+.+.+ +|++++|+++......+++++++|+++.++...... .
T Consensus 174 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~----~ 246 (325)
T cd08271 174 --SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRG-VDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDAS----P 246 (325)
T ss_pred --cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCC-CcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCc----c
Confidence 3456677788999888877654 3456777777666 999999999877778899999999999987443221 1
Q ss_pred ccceecceEEEEEechhhccccC---HHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 239 SAFIFKDLSLKGFWLQKWLSSEK---ATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
...+.+++.+....+........ .....+.+..+++++.++.+.+. ++.++++++.++++.+.+++..+ |+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~-kiv~~~ 325 (325)
T cd08271 247 DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRG-KIVVTI 325 (325)
T ss_pred hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccc-eEEEEC
Confidence 11123334444333322111111 13456778889999999998764 67899999999999999888777 998874
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=9.8e-35 Score=255.51 Aligned_cols=301 Identities=25% Similarity=0.298 Sum_probs=225.0
Q ss_pred cCCCCCC---CCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCC-CCCCCCEEeeCCC----
Q 021311 3 ELPPVEV---KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT-RLAPGDWVIPSPP---- 74 (314)
Q Consensus 3 ~~~~p~~---~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~-~~~~Gd~V~~~~~---- 74 (314)
+++.|.| .+++|+||+.++++|+.|+....+........|.++|+|++|+|+++|+.++ .|++||+|+++..
T Consensus 17 ~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~ 96 (352)
T cd08247 17 TIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYG 96 (352)
T ss_pred ccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCC
Confidence 3444444 8999999999999999998877543221112478899999999999999998 8999999998742
Q ss_pred CCCcccceEeeecc----ceEEcCCCCCHHHhhcccccHHHHHHHHHHhh-cCCCCCEEEEcCCCcHHHHHHHHHHHHcC
Q 021311 75 SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRG 149 (314)
Q Consensus 75 ~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~g~~g~~G~~a~~la~~~g 149 (314)
..|+|++|++++.+ .++++|+++++++++.++..+.|||+++.+.+ ++++|++++|+|+++.+|++++++|+..|
T Consensus 97 ~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~ 176 (352)
T cd08247 97 GQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHY 176 (352)
T ss_pred CCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcC
Confidence 14899999999987 79999999999999999999999999998877 79999999999999999999999999874
Q ss_pred -C-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh----HHHHHHHhc-CCCCCcEEEecCCC-ccHHHHHHhcc---
Q 021311 150 -I-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLA-NLPEPALGFNCVGG-NSASKVLKFLS--- 218 (314)
Q Consensus 150 -~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~i~~~~~-~~g~~d~v~d~~g~-~~~~~~~~~l~--- 218 (314)
. .++.+. ++++.+.++++|+++++++++.. ..++.+.+. +.+ +|++|||.|+ .....++++++
T Consensus 177 ~~~~v~~~~-----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~~l~~~~ 250 (352)
T cd08247 177 NIGTVVGTC-----SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK-FDLILDCVGGYDLFPHINSILKPKS 250 (352)
T ss_pred CcceEEEEe-----ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCC-ceEEEECCCCHHHHHHHHHHhCccC
Confidence 4 455554 34445577889999999876543 445555444 444 9999999998 45578899999
Q ss_pred cCCEEEEEcCCCCCCccc-c---------cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-cee
Q 021311 219 QGGTMVTYGGMSKKPITV-S---------TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MEL 287 (314)
Q Consensus 219 ~~G~~v~~g~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~ 287 (314)
++|+++.++.....+... . ....+.++.++......... ..+. .+.++.+++++.++.+.+. ++.
T Consensus 251 ~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~l~~~~~~~ 326 (352)
T cd08247 251 KNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL--LDPN--ADWIEKCAELIADGKVKPPIDSV 326 (352)
T ss_pred CCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE--ecCC--HHHHHHHHHHHhCCCeEeeeccE
Confidence 999999875332211110 0 00111122222221111100 0111 2567888899999998864 568
Q ss_pred eccccHHHHHHHHhccCCCCCceEeeC
Q 021311 288 VPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 288 ~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++++++|+.+.+++..+ |+++++
T Consensus 327 ~~l~~~~~a~~~~~~~~~~g-kvvi~~ 352 (352)
T cd08247 327 YPFEDYKEAFERLKSNRAKG-KVVIKV 352 (352)
T ss_pred ecHHHHHHHHHHHHcCCCCC-cEEEeC
Confidence 99999999999999988777 999874
No 114
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=3.1e-34 Score=245.36 Aligned_cols=288 Identities=26% Similarity=0.299 Sum_probs=240.1
Q ss_pred CcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccceEeeeccceE
Q 021311 12 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 91 (314)
Q Consensus 12 ~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~ 91 (314)
+||+||+.++++|+.|+....+.++ .+|.++|||++|+|+++|+++..+++||+|.++. .|+|++|+.++.+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~ 75 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--PGAFATHVRVDARLVV 75 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe--cCcccceEEechhheE
Confidence 5899999999999999998887652 4578999999999999999999999999999986 5899999999999999
Q ss_pred EcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh
Q 021311 92 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG 171 (314)
Q Consensus 92 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~ 171 (314)
++|+++++.+++.++.++.++|+++.+...+++|++++|+|++|.+|++++++++..|++++.+++ +.++.+.++.
T Consensus 76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~----~~~~~~~~~~ 151 (293)
T cd05195 76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVG----SEEKREFLRE 151 (293)
T ss_pred eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHH
Confidence 999999999999999999999999988889999999999998899999999999999999888874 5677788888
Q ss_pred CC--CcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC-cccccccceecceE
Q 021311 172 LG--ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP-ITVSTSAFIFKDLS 247 (314)
Q Consensus 172 lg--~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~ 247 (314)
++ ++.++++.+. ..+++++.+.+.+ +|+++||.++.....++++++++|+++.+|...... ..+.. ..+.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~ 229 (293)
T cd05195 152 LGGPVDHIFSSRDLSFADGILRATGGRG-VDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGM-RPFLRNVS 229 (293)
T ss_pred hCCCcceEeecCchhHHHHHHHHhCCCC-ceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccch-hhhccCCe
Confidence 87 6778877654 4466777777666 999999999987899999999999999998544321 11222 22345677
Q ss_pred EEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 248 LKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
+....+..+.. ..+....+.+..+++++.++.+.+. +..+++++++++++.+..++..+ |+++
T Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~ivv 293 (293)
T cd05195 230 FSSVDLDQLAR-ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIG-KVVL 293 (293)
T ss_pred EEEEeHHHHhh-hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCc-eecC
Confidence 77766554432 2344556778899999999998865 55799999999999999887766 8764
No 115
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-34 Score=253.50 Aligned_cols=292 Identities=27% Similarity=0.314 Sum_probs=228.9
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCC--CCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-----
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~--~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~----- 74 (314)
.+.+.|.|+++||+||+.++++|+.|..++.+.. .....+|..+|+|++|+|+.+|+.++.+++||+|+++..
T Consensus 16 ~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 95 (341)
T cd05281 16 VEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGK 95 (341)
T ss_pred EeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCC
Confidence 4678888999999999999999999988765431 111235678999999999999999999999999998521
Q ss_pred ---------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCC
Q 021311 75 ---------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGA 133 (314)
Q Consensus 75 ---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~ 133 (314)
..|+|++|++++.+.++++|++++++.+ +++..+.++++++. ...+++++|||.|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~ 172 (341)
T cd05281 96 CYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGC 172 (341)
T ss_pred ChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECC
Confidence 2589999999999999999999998555 55667888988875 45679999999876
Q ss_pred CcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCc-cHH
Q 021311 134 TSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SAS 211 (314)
Q Consensus 134 ~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~-~~~ 211 (314)
|.+|++++++|+..|+ +++++. +++++.+.++++|++++++++......+++++++.+ +|++|||+|+. ...
T Consensus 173 -g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-vd~vld~~g~~~~~~ 246 (341)
T cd05281 173 -GPIGLMAIAVAKAAGASLVIASD----PNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTG-VDVVLEMSGNPKAIE 246 (341)
T ss_pred -CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCC-CCEEEECCCCHHHHH
Confidence 9999999999999999 466553 377888888999999998876543226777777665 99999999875 458
Q ss_pred HHHHhcccCCEEEEEcCCCCCCccccc-ccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc---ccee
Q 021311 212 KVLKFLSQGGTMVTYGGMSKKPITVST-SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY---DMEL 287 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~---~~~~ 287 (314)
.++++|+++|+++.+|.... ...+.. .....+++++.+..... ..+.+..+++++.++.+.+ .++.
T Consensus 247 ~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~~l~~~~~~~~~ 316 (341)
T cd05281 247 QGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGRK---------MFETWYQVSALLKSGKVDLSPVITHK 316 (341)
T ss_pred HHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecCC---------cchhHHHHHHHHHcCCCChhHheEEE
Confidence 88999999999999985433 222222 22455777777654211 1234677889999999864 2457
Q ss_pred eccccHHHHHHHHhccCCCCCceEeeC
Q 021311 288 VPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 288 ~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
+++++++++|+.+.+++ .+ |+|+++
T Consensus 317 ~~~~~~~~a~~~~~~~~-~g-k~vv~~ 341 (341)
T cd05281 317 LPLEDFEEAFELMRSGK-CG-KVVLYP 341 (341)
T ss_pred ecHHHHHHHHHHHhcCC-Cc-eEEecC
Confidence 99999999999999988 77 999864
No 116
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.6e-34 Score=250.44 Aligned_cols=302 Identities=25% Similarity=0.324 Sum_probs=243.9
Q ss_pred cCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 3 ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 3 ~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
+.+.|+|++++|+|++.++++|+.|.....+.++..+..|..+|||++|+|+.+|+++.++++||+|+++.. .|+|++|
T Consensus 18 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-~~~~~~~ 96 (337)
T cd08275 18 KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR-FGGYAEV 96 (337)
T ss_pred ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC-CCeeeeE
Confidence 456677899999999999999999999888876544456788999999999999999999999999999863 4899999
Q ss_pred EeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc
Q 021311 83 VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 162 (314)
Q Consensus 83 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~ 162 (314)
+.++.+.++++|+++++.+++.++..+.+||+++.+.++++++++|+|+|++|.+|++++++|+.. .++.++.. ..
T Consensus 97 ~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~--~~~~~~~~--~~ 172 (337)
T cd08275 97 VNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV--PNVTVVGT--AS 172 (337)
T ss_pred EEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc--cCcEEEEe--CC
Confidence 999999999999999999999999999999999988889999999999999999999999999998 33333322 13
Q ss_pred HHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCC---c----
Q 021311 163 DEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKP---I---- 234 (314)
Q Consensus 163 ~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~---~---- 234 (314)
+++.+.++.+|.+.+++.... ....++..+. . ++|+++||.|+.....++++++++|+++.+|...... .
T Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 250 (337)
T cd08275 173 ASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E-GVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFK 250 (337)
T ss_pred HHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C-CceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccc
Confidence 556777888999888887654 3355766664 3 4999999999887788999999999999998543211 1
Q ss_pred ---------ccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccC
Q 021311 235 ---------TVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLH 304 (314)
Q Consensus 235 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~ 304 (314)
.+.+...+.+++++.++....... ..+ .....+..+++++.++.+.+. ++.|++++++++++.+.+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (337)
T cd08275 251 LAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRK 328 (337)
T ss_pred cccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCC
Confidence 111234467888888887643221 112 334567889999999998865 46799999999999999888
Q ss_pred CCCCceEeeC
Q 021311 305 GSQPKQVIKF 314 (314)
Q Consensus 305 ~~~~k~vi~~ 314 (314)
..+ |+++++
T Consensus 329 ~~~-kvv~~~ 337 (337)
T cd08275 329 NIG-KVVLTP 337 (337)
T ss_pred Ccc-eEEEeC
Confidence 777 999875
No 117
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.3e-34 Score=249.63 Aligned_cols=261 Identities=24% Similarity=0.339 Sum_probs=216.1
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC-------
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------- 74 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------- 74 (314)
++++.|++.+++|+|+|.++++|+.|.....+.+.. ...|..+|+|++|+|+.+|++++.+++||+|++...
T Consensus 17 ~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~ 95 (306)
T cd08258 17 REVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRC 95 (306)
T ss_pred eecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCC
Confidence 577889999999999999999999999888886532 245789999999999999999999999999998642
Q ss_pred --------------------CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCC
Q 021311 75 --------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 134 (314)
Q Consensus 75 --------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~ 134 (314)
..|+|++|++++.+.++++|+++++++++ ++...++||+++...++++++++|||.| +
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~ 173 (306)
T cd08258 96 PYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFG-P 173 (306)
T ss_pred cchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEEC-C
Confidence 14899999999999999999999999887 6668899999998889999999999977 5
Q ss_pred cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCC-ccHHH
Q 021311 135 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASK 212 (314)
Q Consensus 135 g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~-~~~~~ 212 (314)
|.+|++++++|+..|++++.+... +++++.+.++.+|++++ +++... .+.+...+.+.+ +|+++||.|+ .....
T Consensus 174 g~~g~~~~~la~~~G~~v~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~ 249 (306)
T cd08258 174 GPIGLLAAQVAKLQGATVVVVGTE--KDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDG-ADVVIECSGAVPALEQ 249 (306)
T ss_pred CHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCC-CCEEEECCCChHHHHH
Confidence 999999999999999998776433 24667788888999888 776543 355777666655 9999999976 45588
Q ss_pred HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcC
Q 021311 213 VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG 279 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 279 (314)
.+++|+++|+++.+|........++...++.+++++.|++++.. ++++++++++++|
T Consensus 250 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~ 306 (306)
T cd08258 250 ALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP----------ASWETALRLLASG 306 (306)
T ss_pred HHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch----------HhHHHHHHHHhcC
Confidence 99999999999999976533455566667779999999987542 4577788887765
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=9.5e-34 Score=246.03 Aligned_cols=302 Identities=26% Similarity=0.347 Sum_probs=247.8
Q ss_pred cCCCCCCC-CCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccc
Q 021311 3 ELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 81 (314)
Q Consensus 3 ~~~~p~~~-~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~ 81 (314)
+.+ |.+. +++++|++.++++|+.|+....+.+...+..|..+|||++|+|+.+|+++..+++||+|+++.. .|++++
T Consensus 19 ~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-~~~~~~ 96 (323)
T cd08241 19 EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG-QGGFAE 96 (323)
T ss_pred cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC-CceeEE
Confidence 344 5555 5999999999999999999888766443345678999999999999999999999999999863 479999
Q ss_pred eEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC
Q 021311 82 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 161 (314)
Q Consensus 82 ~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~ 161 (314)
|+.++.+.++++|+++++.+++.+..++.+||+++.+.++++++++++|+|++|.+|++++++++..|++++.+.+
T Consensus 97 ~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~---- 172 (323)
T cd08241 97 EVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAAS---- 172 (323)
T ss_pred EEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeC----
Confidence 9999999999999999999999888899999999987789999999999999999999999999999999888874
Q ss_pred cHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccccc
Q 021311 162 SDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSA 240 (314)
Q Consensus 162 ~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 240 (314)
+.++.+.++++|.+.+++.... ..+.++..+.+.+ +|+++||.|+.....++++++++|+++.+|........+....
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 251 (323)
T cd08241 173 SEEKLALARALGADHVIDYRDPDLRERVKALTGGRG-VDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANL 251 (323)
T ss_pred CHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCC-cEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHH
Confidence 5677888888998888877654 3456777777665 9999999998777889999999999999985432211122334
Q ss_pred ceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEee
Q 021311 241 FIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
.+.+++++.+.....+.. ..+....+.++.+++++.++.+.+. ++.|+++++.++++.+.+++..+ |++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvv~ 323 (323)
T cd08241 252 LLLKNISVVGVYWGAYAR-REPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATG-KVVLT 323 (323)
T ss_pred HhhcCcEEEEEecccccc-hhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCC-cEEeC
Confidence 456888888877654422 2344456778899999999988764 56799999999999999887776 88764
No 119
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2e-34 Score=245.19 Aligned_cols=233 Identities=21% Similarity=0.237 Sum_probs=190.4
Q ss_pred cCCcceEEEEEEecCCCC------CCCCCCEEeeCCC---------------------------------CCCcccceEe
Q 021311 44 VGGYEGVGEVYSVGSAVT------RLAPGDWVIPSPP---------------------------------SSGTWQSYVV 84 (314)
Q Consensus 44 ~~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~---------------------------------~~g~~~~~~~ 84 (314)
++|||++|+|+++|++|+ +|++||||...+. .+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999999 8999999976421 1389999999
Q ss_pred eecc-ceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcH
Q 021311 85 KDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 163 (314)
Q Consensus 85 ~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~ 163 (314)
++++ .++++|++++++.++.+++.+.|||+++.+ ....++++|||+|+ |++|++++|+|+.+|++.+++++ .++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~---~~~ 155 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD---PSP 155 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCH
Confidence 9997 799999999999999999899999999876 56679999999998 99999999999999998444443 378
Q ss_pred HHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCcc-HHHHHHhcccCCEEEEEcCCC-CCCcccccccc
Q 021311 164 EAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLSQGGTMVTYGGMS-KKPITVSTSAF 241 (314)
Q Consensus 164 ~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~ 241 (314)
++.+.++++|+++++++.+. .+.+++++.+.+ +|++|||+|.+. +..++++++++|+++.+|... ..+.++++..+
T Consensus 156 ~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 156 DRRELALSFGATALAEPEVL-AERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred HHHHHHHHcCCcEecCchhh-HHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 88999999999999887543 345666776665 999999998765 589999999999999999654 34456777788
Q ss_pred eecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcC--Cccc---cceeeccccH
Q 021311 242 IFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREG--KLKY---DMELVPFNNF 293 (314)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~~~~---~~~~~~~~~~ 293 (314)
+.+++++.|++... .+.++++++++.++ ++.+ .++.|+++|+
T Consensus 234 ~~~~~~i~g~~~~~----------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 234 VRRWLTIRGVHNYE----------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HhCCcEEEecCCCC----------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 88999999975421 14578888898875 4443 2578999874
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-33 Score=244.54 Aligned_cols=294 Identities=30% Similarity=0.344 Sum_probs=228.8
Q ss_pred CccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCCC--CCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--CC
Q 021311 1 MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SS 76 (314)
Q Consensus 1 i~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--~~ 76 (314)
+++.+.|++.+++|+|++.++++|+.|.....+.++. ....|..+|||++|+|+++|+++.++++||+|+++.. ..
T Consensus 16 ~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~ 95 (319)
T cd08267 16 EVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGG 95 (319)
T ss_pred cccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCCC
Confidence 3577888999999999999999999999988776531 1134678999999999999999999999999998752 24
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
|+|++|+.++.+.++++|++++++.++.++.++.+||+++.+...++++++++|+|++|.+|++++++|+..|++++.++
T Consensus 96 g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~ 175 (319)
T cd08267 96 GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVC 175 (319)
T ss_pred ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 89999999999999999999999999999999999999998877899999999999999999999999999999988887
Q ss_pred cCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcCCCCCCc
Q 021311 157 RDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGMSKKPI 234 (314)
Q Consensus 157 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~~~~~~~ 234 (314)
+.++.+.++++|.+++++....... +..+.+.+ +|+++||+++... ......++++|+++.+|.......
T Consensus 176 -----~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~-~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~ 247 (319)
T cd08267 176 -----STRNAELVRSLGADEVIDYTTEDFV--ALTAGGEK-YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLL 247 (319)
T ss_pred -----CHHHHHHHHHcCCCEeecCCCCCcc--hhccCCCC-CcEEEECCCchHHHHHHhhhccCCCCEEEEecccccccc
Confidence 2367788888999888876654322 33444544 9999999996432 333344999999999985433221
Q ss_pred ccc---cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCce
Q 021311 235 TVS---TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQ 310 (314)
Q Consensus 235 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~ 310 (314)
... ..........+..... . +. .+.+..+++++.++.+.+. ++.|++++++++++.+.+++..+ |+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~----~---~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~-~v 317 (319)
T cd08267 248 LVLLLLPLTLGGGGRRLKFFLA----K---PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARG-KV 317 (319)
T ss_pred ccccccchhhccccceEEEEEe----c---CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCC-cE
Confidence 111 0111111122222111 0 11 4678889999999988764 56899999999999999887766 77
Q ss_pred Ee
Q 021311 311 VI 312 (314)
Q Consensus 311 vi 312 (314)
++
T Consensus 318 vv 319 (319)
T cd08267 318 VI 319 (319)
T ss_pred eC
Confidence 64
No 121
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=3e-33 Score=238.91 Aligned_cols=282 Identities=27% Similarity=0.339 Sum_probs=234.0
Q ss_pred EEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccceEeeeccceEEcCC
Q 021311 16 VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 95 (314)
Q Consensus 16 v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~ 95 (314)
||+.++++|+.|+....+.++ .|.++|||++|+|+++|++++.+++||+|+++. .|+|++|+.++.+.++++|+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~~~p~ 75 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA--PGSFATYVRTDARLVVPIPD 75 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--CCceeeEEEccHHHeEECCC
Confidence 899999999999998887653 257899999999999999999999999999986 58999999999999999999
Q ss_pred CCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-
Q 021311 96 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA- 174 (314)
Q Consensus 96 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~- 174 (314)
++++.+++.+++.+.++|+++.+...+.+|++|+|+|++|.+|++++++++..|++++.+++ ++++.+.++++|.
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~----~~~~~~~~~~~g~~ 151 (288)
T smart00829 76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAG----SPEKRDFLRELGIP 151 (288)
T ss_pred CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHcCCC
Confidence 99999999999999999999977789999999999998899999999999999999888874 6778888889998
Q ss_pred -cEEEecChh-hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCC-CcccccccceecceEEEEE
Q 021311 175 -DEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKK-PITVSTSAFIFKDLSLKGF 251 (314)
Q Consensus 175 -~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (314)
+.++++.+. ..+.+...+.+++ +|+++|++++.....++++++++|+++.+|..... ...+.... +.+++++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (288)
T smart00829 152 DDHIFSSRDLSFADEILRATGGRG-VDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAV 229 (288)
T ss_pred hhheeeCCCccHHHHHHHHhCCCC-cEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEE
Confidence 778877654 3456777777665 99999999987778899999999999999854321 12233333 4567787777
Q ss_pred echhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 252 WLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.+..+. ..+....+.+..+++++.++++.+. ++.|++++++++++.+..++..+ |+++
T Consensus 230 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ivv 288 (288)
T smart00829 230 DLDALE--EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIG-KVVL 288 (288)
T ss_pred EHHHhh--cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcc-eEeC
Confidence 654432 1334455677889999999988763 56799999999999999987666 7764
No 122
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3.3e-33 Score=241.22 Aligned_cols=287 Identities=25% Similarity=0.351 Sum_probs=234.6
Q ss_pred ccCCCCCCCCCcEEEEEEeecCChhhhhhhccCCC--CCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC--CCC
Q 021311 2 IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SSG 77 (314)
Q Consensus 2 ~~~~~p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~--~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--~~g 77 (314)
++.+.|++++++|+|++.++++|+.|+....+... ....+|..+|||++|+|+.+|+++..+++||+|.++.. ..|
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g 97 (309)
T cd05289 18 ADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGG 97 (309)
T ss_pred cccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCCCCCC
Confidence 35566778999999999999999999998877642 12245889999999999999999999999999999851 137
Q ss_pred cccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 78 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 78 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
+|++|+.++.+.++++|+++++..++.++..+.++|+++.+...+.++++++|+|++|.+|++++++++..|++++++++
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~ 177 (309)
T cd05289 98 AYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS 177 (309)
T ss_pred cceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999999999999999999999999988777999999999999999999999999999999988874
Q ss_pred CCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCcccc
Q 021311 158 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVS 237 (314)
Q Consensus 158 ~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 237 (314)
++ +.+.++++|.+.+++.......+ .+.+.+ +|+++||+++.....++++++++|+++.+|.......
T Consensus 178 ----~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--- 245 (309)
T cd05289 178 ----AA-NADFLRSLGADEVIDYTKGDFER---AAAPGG-VDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQ--- 245 (309)
T ss_pred ----ch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCC-ceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcchh---
Confidence 34 67777889988888776543322 333444 9999999999877899999999999999985433111
Q ss_pred cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 238 TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
..+.+++++....+. +. .+.++.+++++.++.+.+. ++.|++++++++++.+.+++..+ |+++
T Consensus 246 --~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-kvv~ 309 (309)
T cd05289 246 --AAKRRGVRAGFVFVE-------PD--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARG-KVVL 309 (309)
T ss_pred --hhhhccceEEEEEec-------cc--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCC-cEeC
Confidence 233455666655431 11 4678889999999988754 67899999999999999887766 8764
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=3.1e-32 Score=230.81 Aligned_cols=236 Identities=31% Similarity=0.420 Sum_probs=199.4
Q ss_pred cEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCC------------------
Q 021311 13 DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------ 74 (314)
Q Consensus 13 eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------------------ 74 (314)
||+|+|.++++|+.|+....+..+....+|..+|||++|+|+++|+.++.|++||+|++...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 68999999999999999998876533356889999999999999999999999999999762
Q ss_pred ----CCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC
Q 021311 75 ----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 150 (314)
Q Consensus 75 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~ 150 (314)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....++++++|||+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 1589999999999999999999999999999999999999999877779999999999966 99999999999999
Q ss_pred cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh-HHHHHHHhcCCCCCcEEEecCCC-ccHHHHHHhcccCCEEEEEcC
Q 021311 151 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 151 ~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~ 228 (314)
+++++.. ++++.+.++.+|++.+++..+.. .+.+. ...+.+ +|+++||++. .....++++++++|+++.++.
T Consensus 160 ~v~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~ 233 (271)
T cd05188 160 RVIVTDR----SDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGG-ADVVIDAVGGPETLAQALRLLRPGGRIVVVGG 233 (271)
T ss_pred eEEEEcC----CHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCC-CCEEEECCCCHHHHHHHHHhcccCCEEEEEcc
Confidence 9888874 67788888889988888876543 34455 444444 9999999998 667889999999999999996
Q ss_pred CCCCCcccccccceecceEEEEEechh
Q 021311 229 MSKKPITVSTSAFIFKDLSLKGFWLQK 255 (314)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
.............+.+++++.+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 234 TSGGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred CCCCCCcccHHHHHhcceEEEEeecCC
Confidence 554333223445677899999987644
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=1.1e-30 Score=210.41 Aligned_cols=290 Identities=24% Similarity=0.349 Sum_probs=230.9
Q ss_pred CCCCCCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCc----ceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccce
Q 021311 7 VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY----EGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 82 (314)
Q Consensus 7 p~~~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~----e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~ 82 (314)
.++++++|+||..|.+..|.-...+....+...-.|+.||- ..+|+|++ |...++++||.|.++. +|.+|
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~----gWeey 106 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV----GWEEY 106 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec----cceEE
Confidence 45689999999999999887765554433321112444442 66899998 6778899999999996 89999
Q ss_pred Eeeeccc--eEEcCC--CCCHHHh-hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 83 VVKDQSV--WHKVSK--DSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 83 ~~~~~~~--~~~~p~--~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
.+++++. .+++|. ++++... .++..+.+|||-.+.+++.++.|++++|.||+|++|+.+.|+|+.+|+.|+..+
T Consensus 107 sii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsa- 185 (343)
T KOG1196|consen 107 SVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSA- 185 (343)
T ss_pred EEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEec-
Confidence 9998754 444444 3333322 345567999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHH-hCCCcEEEecChh-hHH-HHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCc
Q 021311 158 DRAGSDEAKEKLK-GLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPI 234 (314)
Q Consensus 158 ~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~-~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 234 (314)
++.++...++ ++|.+.++||.++ +.+ .+++.... ++|+.||++|+...+..+..|+..||++.+|..+..+.
T Consensus 186 ---GS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~--GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~ 260 (343)
T KOG1196|consen 186 ---GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPE--GIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNL 260 (343)
T ss_pred ---CChhhhhhhHhccCCccceeccCccCHHHHHHHhCCC--cceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccc
Confidence 4889898886 5799999999876 554 45554433 49999999999999999999999999999998775443
Q ss_pred ccc-----cccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCcccccee-eccccHHHHHHHHhccCCCCC
Q 021311 235 TVS-----TSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKYDMEL-VPFNNFQTALSKALGLHGSQP 308 (314)
Q Consensus 235 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~ 308 (314)
+.+ ...+..+.+++.|+....+ .+++.+.++.+..++++|+++..-+. -.|++.++||.-|..++..|
T Consensus 261 ~~~~~~~~l~~ii~Kr~~iqgflv~d~-----~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvG- 334 (343)
T KOG1196|consen 261 ENPEGLHNLSTIIYKRIRIQGFLVSDY-----LDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVG- 334 (343)
T ss_pred cCCccccchhhheeeeEEeeeEEeech-----hhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCccc-
Confidence 322 2456778899999766544 45667889999999999999987654 46999999999999999999
Q ss_pred ceEeeC
Q 021311 309 KQVIKF 314 (314)
Q Consensus 309 k~vi~~ 314 (314)
|.++.+
T Consensus 335 Kqiv~v 340 (343)
T KOG1196|consen 335 KQLVKV 340 (343)
T ss_pred ceEEEe
Confidence 988763
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=2e-31 Score=245.33 Aligned_cols=287 Identities=19% Similarity=0.166 Sum_probs=245.1
Q ss_pred CCCcEEEEEEeecCChhhhhhhccCCCCCC------CCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccceE
Q 021311 10 KENDVCVKMLAAPINPSDINRIEGVYPVRP------KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYV 83 (314)
Q Consensus 10 ~~~eV~v~v~~~~i~~~D~~~~~~~~~~~~------~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~~ 83 (314)
.++.=+.-|.|+.||..|+-...|.++..- ..-+.+|-||+|+ .+-|.||+++.+ .-++++.+
T Consensus 1443 ~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvp-AksLATt~ 1511 (2376)
T KOG1202|consen 1443 CPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVP-AKSLATTV 1511 (2376)
T ss_pred CCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeee-hhhhhhhh
Confidence 556668889999999999999888765321 1236789999997 566999999876 46899999
Q ss_pred eeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcH
Q 021311 84 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 163 (314)
Q Consensus 84 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~ 163 (314)
.++.+.++.+|++..+++|++.|+.+.||||+|....+.++|++|||++++|++|++++.+|.+.|++||+++. +.
T Consensus 1512 l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVG----Sa 1587 (2376)
T KOG1202|consen 1512 LASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVG----SA 1587 (2376)
T ss_pred hcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecC----cH
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999994 77
Q ss_pred HHHHHHH----hCCCcEEEecChhhHHH-HHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccc
Q 021311 164 EAKEKLK----GLGADEVFTESQLEVKN-VKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST 238 (314)
Q Consensus 164 ~~~~~~~----~lg~~~~~~~~~~~~~~-i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 238 (314)
+++++++ ++...++-|+++.++++ +++.|.|+| +|+|+|+...+..+..++||.-+||+..+|-..-...+...
T Consensus 1588 EKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLG 1666 (2376)
T KOG1202|consen 1588 EKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLG 1666 (2376)
T ss_pred HHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcch
Confidence 8877774 46777788888876655 888899998 99999999999999999999999999999954433333445
Q ss_pred ccceecceEEEEEechhhccccCHHHHHHHHHHHHHHHHcCCccc-cceeeccccHHHHHHHHhccCCCCCceEeeC
Q 021311 239 SAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLAREGKLKY-DMELVPFNNFQTALSKALGLHGSQPKQVIKF 314 (314)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~k~vi~~ 314 (314)
..++.+|.++.|..+.+++. .+.+++++...-+.+-++.|..+| ++++|+-.++++||+.|.+++..| |+|+++
T Consensus 1667 MavfLkNvsfHGiLLDsvme-ge~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIG-KVvikv 1741 (2376)
T KOG1202|consen 1667 MAVFLKNVSFHGILLDSVME-GEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIG-KVVIKV 1741 (2376)
T ss_pred hhhhhcccceeeeehhhhhc-CcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccc-eEEEEE
Confidence 67888999999999988876 456666666777777777788887 478999999999999999999999 999874
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=3.1e-29 Score=213.37 Aligned_cols=258 Identities=23% Similarity=0.265 Sum_probs=198.6
Q ss_pred cCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHH
Q 021311 33 GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA 112 (314)
Q Consensus 33 ~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta 112 (314)
|.+|. .+|.++|||++|+|+++|++++++++||+|+++. .|++|+.++.+.++++|+++++++++.+ .++++|
T Consensus 14 ~~~~~--~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta 86 (277)
T cd08255 14 GTEKL--PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG----PHAERVVVPANLLVPLPDGLPPERAALT-ALAATA 86 (277)
T ss_pred cCccC--cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHH
Confidence 44444 4789999999999999999999999999999873 6999999999999999999999999888 789999
Q ss_pred HHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCC-CcEEEecChhhHHHHHH
Q 021311 113 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKG 190 (314)
Q Consensus 113 ~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg-~~~~~~~~~~~~~~i~~ 190 (314)
|+++. .++++++++++|+|+ |.+|++++++|+.+|++ ++++.+ ++++.+.++++| ++.+++..+ .
T Consensus 87 ~~~~~-~~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~----~~~~~~~~~~~g~~~~~~~~~~-------~ 153 (277)
T cd08255 87 LNGVR-DAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDP----DAARRELAEALGPADPVAADTA-------D 153 (277)
T ss_pred HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECC----CHHHHHHHHHcCCCccccccch-------h
Confidence 99986 589999999999986 99999999999999999 776663 677788888898 555544432 1
Q ss_pred HhcCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccC-H-HHHHH
Q 021311 191 LLANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEK-A-TECRN 267 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 267 (314)
.+.+.+ +|++|||++.. .....+++++++|+++.+|..... .......+..+.+++.+..+........ + ....+
T Consensus 154 ~~~~~~-~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd08255 154 EIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEAR 231 (277)
T ss_pred hhcCCC-CCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccc
Confidence 123344 99999998864 458899999999999999865433 1111123334556777765433211110 0 12335
Q ss_pred HHHHHHHHHHcCCcccc-ceeeccccHHHHHHHHhccCCCCCceEe
Q 021311 268 MIDYLLCLAREGKLKYD-MELVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
.++++++++.++.+.+. ++.|+++++.++|+.+.+++..-.|+++
T Consensus 232 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 232 NLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 68889999999998764 5679999999999999987444347764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.79 E-value=3.2e-19 Score=129.45 Aligned_cols=83 Identities=41% Similarity=0.516 Sum_probs=71.5
Q ss_pred CCcEEEEEEeecCChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC---------------
Q 021311 11 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------- 75 (314)
Q Consensus 11 ~~eV~v~v~~~~i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~--------------- 75 (314)
|+||+|||.++|||++|++.+.+.......+|.++|||++|+|+++|++++.|++||+|++....
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 78999999999999999999999544445789999999999999999999999999999985421
Q ss_pred -----------CCcccceEeeeccceEEc
Q 021311 76 -----------SGTWQSYVVKDQSVWHKV 93 (314)
Q Consensus 76 -----------~g~~~~~~~~~~~~~~~~ 93 (314)
+|+|+||+++++++++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 899999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=2.2e-17 Score=124.09 Aligned_cols=115 Identities=30% Similarity=0.483 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh-hHHHHHHHhcCCCCCcEEEecCCC-ccHHHH
Q 021311 136 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASKV 213 (314)
Q Consensus 136 ~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~i~~~~~~~g~~d~v~d~~g~-~~~~~~ 213 (314)
++|++++|+|+..|++++++.. ++++++.++++|+++++++++. ..+++++.+++.+ +|++|||+|. +.++.+
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~----~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDR----SEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRG-VDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEES----SHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSS-EEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHhhccccccccccccccccccccccccc-ceEEEEecCcHHHHHHH
Confidence 5899999999999988888883 7889999999999999999876 5588999998866 9999999994 566999
Q ss_pred HHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechh
Q 021311 214 LKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQK 255 (314)
Q Consensus 214 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (314)
+++++++|+++.+|.......+++...++.+++++.|++..+
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 999999999999997776778888999999999999998754
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.51 E-value=1.2e-14 Score=108.64 Aligned_cols=122 Identities=27% Similarity=0.334 Sum_probs=78.1
Q ss_pred CCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC--CccH-HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEE
Q 021311 172 LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG--GNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSL 248 (314)
Q Consensus 172 lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 248 (314)
||+++++||+..++ +... ++|+||||+| ++.+ ..++++| ++|++|.++. .........+...+
T Consensus 1 LGAd~vidy~~~~~------~~~~-~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRDTDF------AGPG-GVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTCSHH------HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCCccc------cCCC-CceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence 69999999996554 3233 4999999999 4444 5666778 9999999983 11111111122222
Q ss_pred EEEechhhccccCH-HHHHHHHHHHHHHHHcCCccccce-eeccccHHHHHHHHhccCCCCCceEe
Q 021311 249 KGFWLQKWLSSEKA-TECRNMIDYLLCLAREGKLKYDME-LVPFNNFQTALSKALGLHGSQPKQVI 312 (314)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~k~vi 312 (314)
....+... .+ ...++.++.+.+++.+|++++.+. +||++++++|++.+++++..| |+|+
T Consensus 67 ~~~~~~~~----~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~G-KvVl 127 (127)
T PF13602_consen 67 RYSFLFSV----DPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARG-KVVL 127 (127)
T ss_dssp EEECCC-H------HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SS-EEEE
T ss_pred EEEEEEec----CCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCC-eEeC
Confidence 22222110 01 235567999999999999999976 799999999999999999998 9986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.40 E-value=6.6e-12 Score=110.37 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=128.8
Q ss_pred HHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHH
Q 021311 110 LTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 188 (314)
Q Consensus 110 ~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i 188 (314)
-..|.++.+..++ -+|++|+|.|+ |.+|+.+++.++.+|++++++- . ++.+.+.++.+|++.+. . ++
T Consensus 186 ~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d-~---d~~R~~~A~~~G~~~~~-~-----~e- 253 (413)
T cd00401 186 ESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE-V---DPICALQAAMEGYEVMT-M-----EE- 253 (413)
T ss_pred hhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-C---ChhhHHHHHhcCCEEcc-H-----HH-
Confidence 3456666665554 68999999999 9999999999999999876644 2 67778888889985431 1 11
Q ss_pred HHHhcCCCCCcEEEecCCCccH-HH-HHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHH
Q 021311 189 KGLLANLPEPALGFNCVGGNSA-SK-VLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECR 266 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~~~-~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (314)
... ++|++|+|+|.... .. .+++++++|+++.+|.. +.+++...+..+++++.+...... .
T Consensus 254 --~v~---~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~---------~ 316 (413)
T cd00401 254 --AVK---EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVD---------R 316 (413)
T ss_pred --HHc---CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcc---------e
Confidence 111 38999999998664 44 48999999999999933 456777777788899888754311 0
Q ss_pred HHHH--HHHHHHHcCCc-ccc---cee-----eccc-cHHHHHHHHhccCCCCCceEee
Q 021311 267 NMID--YLLCLAREGKL-KYD---MEL-----VPFN-NFQTALSKALGLHGSQPKQVIK 313 (314)
Q Consensus 267 ~~~~--~~~~~l~~g~~-~~~---~~~-----~~~~-~~~~a~~~~~~~~~~~~k~vi~ 313 (314)
..++ ..+.++.+|++ .+. .|. ++|+ ++.++++.+.+.+....|+++.
T Consensus 317 ~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 317 YELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred EEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 1233 68899999988 432 466 8999 9999999999876543477654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.39 E-value=2.8e-11 Score=109.05 Aligned_cols=230 Identities=14% Similarity=0.129 Sum_probs=136.5
Q ss_pred CCcEEEEEEeec-CChhhhhhhccCCCCCCCCCccCCcceEEEEEEecCC----CCCCCCCCEEeeCCCCCCccc-----
Q 021311 11 ENDVCVKMLAAP-INPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA----VTRLAPGDWVIPSPPSSGTWQ----- 80 (314)
Q Consensus 11 ~~eV~v~v~~~~-i~~~D~~~~~~~~~~~~~~p~~~G~e~~G~V~~~G~~----v~~~~~Gd~V~~~~~~~g~~~----- 80 (314)
..+|+|+--|+. .+.+|-......-..... .-+.. +.+|.++-.- +..++.|+.++++.+. ....
T Consensus 30 G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~-~~v~~---~diilkV~~P~~~e~~~l~~g~~li~~l~p-~~~~~l~~~ 104 (509)
T PRK09424 30 GFEVVVESGAGQLASFDDAAYREAGAEIVDG-AAVWQ---SDIILKVNAPSDDEIALLREGATLVSFIWP-AQNPELLEK 104 (509)
T ss_pred CCEEEEeCCCCcCCCCCHHHHHHCCCEEecC-ccccc---CCEEEEeCCCCHHHHHhcCCCCEEEEEeCc-ccCHHHHHH
Confidence 356777776543 345665544321111001 11222 4566665433 3469999999988642 1111
Q ss_pred ----ceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHH----hh----------cCCCCCEEEEcCCCcHHHHHHH
Q 021311 81 ----SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED----FT----------TLNSGDSIVQNGATSIVGQCII 142 (314)
Q Consensus 81 ----~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~----~~----------~~~~~~~vlI~g~~g~~G~~a~ 142 (314)
....+.-+.+.++.+.-++.. ....+-...|.++.. .. +..++++|+|+|+ |.+|++++
T Consensus 105 l~~~~it~ia~e~vpr~sraq~~d~--lssma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~Ai 181 (509)
T PRK09424 105 LAARGVTVLAMDAVPRISRAQSLDA--LSSMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAI 181 (509)
T ss_pred HHHcCCEEEEeecccccccCCCccc--ccchhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHHH
Confidence 112222233333333321111 111112222333322 22 2358999999999 99999999
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh--------------hHHHHHHH-hcCCCCCcEEEecCC
Q 021311 143 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL--------------EVKNVKGL-LANLPEPALGFNCVG 206 (314)
Q Consensus 143 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~--------------~~~~i~~~-~~~~g~~d~v~d~~g 206 (314)
+.|+.+|++++++ +. ++++++.++++|++++ ++..+. ..+..++. ....+++|++|+|++
T Consensus 182 ~~Ak~lGA~V~a~-D~---~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag 257 (509)
T PRK09424 182 GAAGSLGAIVRAF-DT---RPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTAL 257 (509)
T ss_pred HHHHHCCCEEEEE-eC---CHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCC
Confidence 9999999965544 43 8899999999999955 554321 11222232 222124999999999
Q ss_pred Ccc-------HHHHHHhcccCCEEEEEcCCCCCC--ccccccccee-cceEEEEEe
Q 021311 207 GNS-------ASKVLKFLSQGGTMVTYGGMSKKP--ITVSTSAFIF-KDLSLKGFW 252 (314)
Q Consensus 207 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~ 252 (314)
.+. .+..++.|+++|+++.++...+.. .+.+...++. +++++.|.+
T Consensus 258 ~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~ 313 (509)
T PRK09424 258 IPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT 313 (509)
T ss_pred CCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeC
Confidence 632 389999999999999999754443 4555556665 899999975
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.66 E-value=2e-06 Score=77.83 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=87.7
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecCh--------------hhHHH
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ--------------LEVKN 187 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~--------------~~~~~ 187 (314)
.++.+++|.|+ |.+|+++++.++.+|+.++++.. +.++++.++++|++.+ ++..+ +..+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~----~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDT----RPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence 35799999999 99999999999999999776653 6778899999998863 33211 11222
Q ss_pred HHHHhcC-CCCCcEEEecC---CC--c--cHHHHHHhcccCCEEEEEcCCCCCCcccc--ccccee-cceEEEEEe
Q 021311 188 VKGLLAN-LPEPALGFNCV---GG--N--SASKVLKFLSQGGTMVTYGGMSKKPITVS--TSAFIF-KDLSLKGFW 252 (314)
Q Consensus 188 i~~~~~~-~g~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~-~~~~~~~~~ 252 (314)
.++++.+ ..++|++|+|+ |. + .....++.|++|+.+|+++...+..+... ...+.. .++++.+..
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeC
Confidence 3333332 12499999999 54 3 23788999999999999997766654332 222222 358888864
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.37 E-value=2e-06 Score=72.91 Aligned_cols=165 Identities=13% Similarity=0.054 Sum_probs=91.3
Q ss_pred hcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHh----CCCcEEEecChhhHHHHHHHhcC
Q 021311 120 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLAN 194 (314)
Q Consensus 120 ~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~i~~~~~~ 194 (314)
+.++++++||.+|+ |. |..+.++++..|.. .++.++. +++..+.+++ .+...+. ... ..+..+...
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~---s~~~l~~A~~~~~~~g~~~v~-~~~---~d~~~l~~~ 143 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDM---TPEMLAKARANARKAGYTNVE-FRL---GEIEALPVA 143 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECC---CHHHHHHHHHHHHHcCCCCEE-EEE---cchhhCCCC
Confidence 67899999999998 55 88888888887764 3444443 6666666654 3332221 111 112222211
Q ss_pred CCCCcEEEecCC-----C--ccHHHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHH
Q 021311 195 LPEPALGFNCVG-----G--NSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRN 267 (314)
Q Consensus 195 ~g~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
.+.+|+|+.+.. . ..+..+.+.|+|+|+++..+.....+.. ..+.+...+.+...... .
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~----------~ 209 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELP----EEIRNDAELYAGCVAGA----------L 209 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCC----HHHHHhHHHHhccccCC----------C
Confidence 224999986542 1 2358899999999999987644332211 11112221111111100 0
Q ss_pred HHHHHHHHHHcCCcc-cc---ceeeccccHHHHHHHH--hccCCCC
Q 021311 268 MIDYLLCLAREGKLK-YD---MELVPFNNFQTALSKA--LGLHGSQ 307 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~-~~---~~~~~~~~~~~a~~~~--~~~~~~~ 307 (314)
..+++.+++++..+. .. ...++++++.++++.+ ..++..+
T Consensus 210 ~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~ 255 (272)
T PRK11873 210 QEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLD 255 (272)
T ss_pred CHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccC
Confidence 123455556653333 22 2358899999999999 5544333
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.27 E-value=4e-05 Score=65.52 Aligned_cols=110 Identities=9% Similarity=0.092 Sum_probs=79.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.+++++|+|. |.+|+.+++.++.+|++++++.+ +.++.+.++++|...+ .. +.+.+... ++|+||+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r----~~~~~~~~~~~G~~~~-~~-----~~l~~~l~---~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGAR----KSAHLARITEMGLSPF-HL-----SELAEEVG---KIDIIFN 216 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCeee-cH-----HHHHHHhC---CCCEEEE
Confidence 6899999999 99999999999999998777764 5666777788886533 11 22333333 3999999
Q ss_pred cCCCccH-HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEE
Q 021311 204 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKG 250 (314)
Q Consensus 204 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
|++.... ...++.+++++.++.++..++. ..+ ...-.++++..+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEE
Confidence 9876544 6777889999999999866554 222 233345666664
No 135
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.18 E-value=0.001 Score=56.50 Aligned_cols=242 Identities=12% Similarity=0.065 Sum_probs=126.8
Q ss_pred ccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC--------------------------CCcccceEeeeccceEEcCCC
Q 021311 43 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQSVWHKVSKD 96 (314)
Q Consensus 43 ~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~--------------------------~g~~~~~~~~~~~~~~~~p~~ 96 (314)
.+|--.+ ++|++ |.++++.+|.||.++.+. .-.|.+|.++..+.... | .
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-~-~ 106 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-P-E 106 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-c-c
Confidence 4444444 66777 899999999999998742 11222222222222110 0 1
Q ss_pred CCHHHhhcccccHHHHHHHHHHhh--cCCCCCEEEEcCCCcHHHHHHHHHHH--HcCCcEEEEecCCCCcHHHHHHHHhC
Q 021311 97 SPMEYAATIIVNPLTALRMLEDFT--TLNSGDSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKLKGL 172 (314)
Q Consensus 97 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~~~~~vlI~g~~g~~G~~a~~la~--~~g~~vi~~~~~~~~~~~~~~~~~~l 172 (314)
.....+..-| -+.|.|..-..+. +.-..+.|+|..|++-.++.++..++ .-+.+++.++ +..+++..+++
T Consensus 107 ~e~~~~LlrP-Lf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-----S~~N~~Fve~l 180 (314)
T PF11017_consen 107 REDWQMLLRP-LFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-----SARNVAFVESL 180 (314)
T ss_pred hhHHHHHHHH-HHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-----cCcchhhhhcc
Confidence 1112222222 3344543322111 12345889999999999999988888 3345888888 77778888999
Q ss_pred CC-cEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCC-EEEEEcCCCCCCcccccccceecceEEE
Q 021311 173 GA-DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGG-TMVTYGGMSKKPITVSTSAFIFKDLSLK 249 (314)
Q Consensus 173 g~-~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
|. +.++.|++ +..+... ..-+++|++|+... ..+-+.+...= ..+.+|..+........ .+- +.+..
T Consensus 181 g~Yd~V~~Yd~-----i~~l~~~--~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~-~l~--g~~~~ 250 (314)
T PF11017_consen 181 GCYDEVLTYDD-----IDSLDAP--QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPA-DLP--GPRPE 250 (314)
T ss_pred CCceEEeehhh-----hhhccCC--CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccc-cCC--CCCcE
Confidence 85 46666654 3333333 47799999999765 33334443332 56666644433221110 000 00111
Q ss_pred EEechhh----ccccCHHHHHHHHHHHHHHHHcCCccc-cc-eeeccccHHHHHHHHhccCC
Q 021311 250 GFWLQKW----LSSEKATECRNMIDYLLCLAREGKLKY-DM-ELVPFNNFQTALSKALGLHG 305 (314)
Q Consensus 250 ~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~g~~~~-~~-~~~~~~~~~~a~~~~~~~~~ 305 (314)
-+..... ...-.+..+.+.+...+.-+.+..... .+ ..-..+.++++++.+.+++.
T Consensus 251 ~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 251 FFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence 1111111 000112222223333333333333222 23 35789999999999988764
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.17 E-value=4.3e-05 Score=68.23 Aligned_cols=100 Identities=15% Similarity=0.115 Sum_probs=74.5
Q ss_pred HHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHH
Q 021311 112 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG 190 (314)
Q Consensus 112 a~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~ 190 (314)
.|.++.+..++ -.|++++|.|. |.+|..+++.++.+|++++++.. ++.+...+...|...+ + .+++
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~----dp~r~~eA~~~G~~vv-~-----leEa-- 306 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEI----DPICALQALMEGYQVL-T-----LEDV-- 306 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhhHHHHhcCCeec-c-----HHHH--
Confidence 46677665554 67999999999 99999999999999998776552 4444445555666432 1 1121
Q ss_pred HhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcC
Q 021311 191 LLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~ 228 (314)
.. ..|+++++.|.... ...++.|++++.++.+|.
T Consensus 307 -l~---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 307 -VS---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred -Hh---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 11 38999999998653 789999999999999984
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.15 E-value=3.4e-05 Score=68.65 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=74.6
Q ss_pred HHHHHHHHHhhcCC-CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHH
Q 021311 110 LTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 188 (314)
Q Consensus 110 ~ta~~~l~~~~~~~-~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i 188 (314)
..+|+++.+..++. .|++++|.|. |.+|..+++.++.+|++++++.. ++.+...+...|.. +.+ .++
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~----dp~ra~~A~~~G~~-v~~-----l~e- 263 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEV----DPICALQAAMDGFR-VMT-----MEE- 263 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC----CchhhHHHHhcCCE-ecC-----HHH-
Confidence 44677777654555 8999999999 99999999999999998766553 44444444445654 221 112
Q ss_pred HHHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcCCC
Q 021311 189 KGLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~~~ 230 (314)
... ++|++++|+|.... ...+..|++++.++..|...
T Consensus 264 --al~---~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 264 --AAE---LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred --HHh---CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 122 39999999998654 46889999999999998543
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.13 E-value=0.00022 Score=63.02 Aligned_cols=149 Identities=12% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
++.+|+|.|+ |.+|+.+++.++.+|++++++.+ +.++.+.+. .++........+ .+.+.+... ++|++|
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~----~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l~---~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDI----NIDRLRQLDAEFGGRIHTRYSN--AYEIEDAVK---RADLLI 235 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHhcCceeEeccCC--HHHHHHHHc---cCCEEE
Confidence 3456999999 99999999999999998665542 555555553 455432222221 223333333 399999
Q ss_pred ecCC---C--cc--HHHHHHhcccCCEEEEEcCCCCCCccc------ccccceecceEEEEEe-chhhccc-cCHHHHHH
Q 021311 203 NCVG---G--NS--ASKVLKFLSQGGTMVTYGGMSKKPITV------STSAFIFKDLSLKGFW-LQKWLSS-EKATECRN 267 (314)
Q Consensus 203 d~~g---~--~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~ 267 (314)
+|++ . +. ....++.|++++.++.++...+..+.. +.+.+...++.+.+.. +...+.. ....-...
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~ 315 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNA 315 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHH
Confidence 9983 2 22 377888899999999999665544321 2223445677777763 3222211 11111234
Q ss_pred HHHHHHHHHHcCCcc
Q 021311 268 MIDYLLCLAREGKLK 282 (314)
Q Consensus 268 ~~~~~~~~l~~g~~~ 282 (314)
.+..+..+..+|.+.
T Consensus 316 l~~~l~~~~~~g~~~ 330 (370)
T TIGR00518 316 TMPYVLELANHGWRA 330 (370)
T ss_pred HHHHHHHHHhccccc
Confidence 456666777667544
No 139
>PRK12742 oxidoreductase; Provisional
Probab=98.07 E-value=9.3e-05 Score=61.21 Aligned_cols=104 Identities=15% Similarity=0.224 Sum_probs=65.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
.++++||+|++|.+|..+++.+...|++++.+.+. ++++.+. ...++...+ ..+-.+.+.+.+.....+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERLAQETGATAV-QTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHhCCCcEEE
Confidence 46899999999999999999999999998876543 3333333 344554332 222222223333333334599999
Q ss_pred ecCCCccH--------------------------HHHHHhcccCCEEEEEcCCCC
Q 021311 203 NCVGGNSA--------------------------SKVLKFLSQGGTMVTYGGMSK 231 (314)
Q Consensus 203 d~~g~~~~--------------------------~~~~~~l~~~G~~v~~g~~~~ 231 (314)
+++|.... ..+++.++.+|+++.+++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 99875210 233344567899999886543
No 140
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.04 E-value=5e-05 Score=67.17 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhc-CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHH
Q 021311 110 LTALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 188 (314)
Q Consensus 110 ~ta~~~l~~~~~-~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i 188 (314)
..+|.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++++++.. ++.+...+...|+. +.+. ++
T Consensus 179 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~----dp~r~~~A~~~G~~-v~~l-----ee- 246 (406)
T TIGR00936 179 QSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEV----DPIRALEAAMDGFR-VMTM-----EE- 246 (406)
T ss_pred hhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeC----ChhhHHHHHhcCCE-eCCH-----HH-
Confidence 345666666444 468999999999 99999999999999999777653 34444555556653 2211 11
Q ss_pred HHHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcCC
Q 021311 189 KGLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~~ 229 (314)
... +.|++|+++|.... ...+..|++++.++.+|..
T Consensus 247 --al~---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 247 --AAK---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred --HHh---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 111 38999999998664 4588999999999999844
No 141
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.98 E-value=0.0001 Score=61.66 Aligned_cols=108 Identities=23% Similarity=0.299 Sum_probs=70.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EE----ecCh-hhHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF----TESQ-LEVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~-~~----~~~~-~~~~~-i~~~~~~~ 195 (314)
.|+.|+|+||++++|.+++.-....|++.+.+++... ..++. +.+++.+... ++ |-.+ +..++ +.+.....
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~r-rl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRAR-RLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhh-hHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5799999999999999998888888999888886432 33333 5555555443 22 1111 22222 32333344
Q ss_pred CCCcEEEecCCCc--------------------------cHHHHHHhcccC--CEEEEEcCCCCC
Q 021311 196 PEPALGFNCVGGN--------------------------SASKVLKFLSQG--GTMVTYGGMSKK 232 (314)
Q Consensus 196 g~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~ 232 (314)
|++|+.++++|-. .+..++..|++. |+||.+++..+.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 5699999999952 124566666544 999999976654
No 142
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=0.00012 Score=60.59 Aligned_cols=103 Identities=19% Similarity=0.259 Sum_probs=65.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---hCCCcEEEecC--hh-hHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---GLGADEVFTES--QL-EVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~lg~~~~~~~~--~~-~~~~-i~~~~~~~ 195 (314)
.+++++|+|++|.+|..+++.+...|++++.+.+ ++++.+.+ + ..+..+.+..+ +. ..++ +.+.....
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR----NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999998886 34443333 2 22322333222 21 1222 22222112
Q ss_pred CCCcEEEecCCCcc------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 196 PEPALGFNCVGGNS------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 196 g~~d~v~d~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+++|.++.+++... .+..++.++++|+++.+++..
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 35899999997521 234555667789999988653
No 143
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.94 E-value=3.9e-05 Score=71.93 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=66.6
Q ss_pred cCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC-----------------CcHHHHHHHHhCCCcEEEecCh-
Q 021311 121 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----------------GSDEAKEKLKGLGADEVFTESQ- 182 (314)
Q Consensus 121 ~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~lg~~~~~~~~~- 182 (314)
..++|++|+|+|+ |+.|+++++.++..|++++++-..+. ....+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3678999999999 99999999999999998766542110 1245567788899887776432
Q ss_pred hh--HHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEc
Q 021311 183 LE--VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 183 ~~--~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 227 (314)
.. .+.+. . ++|+||+++|.... ...+.....+|.+..++
T Consensus 212 ~~~~~~~~~----~--~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 212 EDITLEQLE----G--EFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CcCCHHHHH----h--hCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 11 22221 1 39999999998543 33334444555554443
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.91 E-value=0.00012 Score=70.34 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=83.6
Q ss_pred CcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 77 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 77 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
-++.+|..+++..++.+ +..+++++.....+ ....-+|+++||+|++|.+|.++++.+...|++++++.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45677777777777766 55556665421100 12234679999999999999999999999999988877
Q ss_pred cCCCCcHHHHHHH-HhCCC--c-EE--EecChh-hHHH-HHHHhcCCCCCcEEEecCCCcc-------------------
Q 021311 157 RDRAGSDEAKEKL-KGLGA--D-EV--FTESQL-EVKN-VKGLLANLPEPALGFNCVGGNS------------------- 209 (314)
Q Consensus 157 ~~~~~~~~~~~~~-~~lg~--~-~~--~~~~~~-~~~~-i~~~~~~~g~~d~v~d~~g~~~------------------- 209 (314)
+ +.++.+.+ ..++. . .. .|-.+. .+++ +.+.....|++|++|+++|...
T Consensus 454 r----~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N 529 (681)
T PRK08324 454 L----DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN 529 (681)
T ss_pred C----CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 5 33333332 33433 1 12 232222 2222 2222222335999999998310
Q ss_pred -------HHHHHHhccc---CCEEEEEcCCC
Q 021311 210 -------ASKVLKFLSQ---GGTMVTYGGMS 230 (314)
Q Consensus 210 -------~~~~~~~l~~---~G~~v~~g~~~ 230 (314)
++.+++.++. +|+++.+++..
T Consensus 530 ~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 1334555555 68999998643
No 145
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.88 E-value=0.00023 Score=59.49 Aligned_cols=142 Identities=15% Similarity=0.194 Sum_probs=87.6
Q ss_pred CCCCCCCEEeeCCCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHH
Q 021311 61 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 140 (314)
Q Consensus 61 ~~~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~ 140 (314)
..+.+||++++.+ +|.+|.. +...++.+++++++..+.- +. ...++..+.. .+.++++||-.|+ |. |..
T Consensus 65 ~p~~~g~~~~i~p----~~~~~~~-~~~~~i~i~p~~afgtg~h-~t-t~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l 133 (250)
T PRK00517 65 HPIRIGDRLWIVP----SWEDPPD-PDEINIELDPGMAFGTGTH-PT-TRLCLEALEK--LVLPGKTVLDVGC-GS-GIL 133 (250)
T ss_pred CCEEEcCCEEEEC----CCcCCCC-CCeEEEEECCCCccCCCCC-HH-HHHHHHHHHh--hcCCCCEEEEeCC-cH-HHH
Confidence 4467899888775 5777754 7778899999988776541 11 1122333322 2578999999998 55 777
Q ss_pred HHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCcc----HHH
Q 021311 141 IIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----ASK 212 (314)
Q Consensus 141 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~----~~~ 212 (314)
++.++ ..|+..+..++. ++...+.+++ .+....+... .+...||+|+.+..... ...
T Consensus 134 ~i~~~-~~g~~~v~giDi---s~~~l~~A~~n~~~~~~~~~~~~~-----------~~~~~fD~Vvani~~~~~~~l~~~ 198 (250)
T PRK00517 134 AIAAA-KLGAKKVLAVDI---DPQAVEAARENAELNGVELNVYLP-----------QGDLKADVIVANILANPLLELAPD 198 (250)
T ss_pred HHHHH-HcCCCeEEEEEC---CHHHHHHHHHHHHHcCCCceEEEc-----------cCCCCcCEEEEcCcHHHHHHHHHH
Confidence 77554 467764445553 5666655543 2221001000 01113999997765543 367
Q ss_pred HHHhcccCCEEEEEcC
Q 021311 213 VLKFLSQGGTMVTYGG 228 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~ 228 (314)
+.+.|+++|++++.|.
T Consensus 199 ~~~~LkpgG~lilsgi 214 (250)
T PRK00517 199 LARLLKPGGRLILSGI 214 (250)
T ss_pred HHHhcCCCcEEEEEEC
Confidence 8889999999998763
No 146
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.84 E-value=0.00016 Score=58.59 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=59.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC----cEEEecChh-hH-HHHHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA----DEVFTESQL-EV-KNVKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~----~~~~~~~~~-~~-~~i~~~~~~~g 196 (314)
.++.++|+||++++|.+.++.+...|++++.+.+ +.++++.+ .+++. ...+|-.+. .. +.+..+....+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR----R~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec----cHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 4588999999999999999999999999999996 66666555 56773 223444443 22 33555555666
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|+.++++|-
T Consensus 81 ~iDiLvNNAGl 91 (246)
T COG4221 81 RIDILVNNAGL 91 (246)
T ss_pred cccEEEecCCC
Confidence 79999999995
No 147
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.81 E-value=0.00063 Score=61.10 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=71.0
Q ss_pred HHHHHHHHhhc-CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHH
Q 021311 111 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 189 (314)
Q Consensus 111 ta~~~l~~~~~-~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~ 189 (314)
..+.++.+..+ .-.|++++|.|. |.+|..+++.++.+|++|+++.. ++.+...+...|+..+ ..+++
T Consensus 239 s~~d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~----dp~~a~~A~~~G~~~~------~leel- 306 (476)
T PTZ00075 239 SLIDGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEI----DPICALQAAMEGYQVV------TLEDV- 306 (476)
T ss_pred HHHHHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CchhHHHHHhcCceec------cHHHH-
Confidence 34455544333 357999999999 99999999999999998776653 3333333333454321 12222
Q ss_pred HHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcCC
Q 021311 190 GLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~~ 229 (314)
.. ..|+++.++|.... ...+..|++++.++.+|-.
T Consensus 307 --l~---~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 307 --VE---TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred --Hh---cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 22 39999999987554 5899999999999999844
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.81 E-value=0.00069 Score=57.64 Aligned_cols=95 Identities=16% Similarity=0.201 Sum_probs=68.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|++++|+|. |.+|.++++.++.+|++++++.+ +.++.+.+.+.|... +. .+.+.+... +.|+|++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R----~~~~~~~~~~~g~~~-~~-----~~~l~~~l~---~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR----SSADLARITEMGLIP-FP-----LNKLEEKVA---EIDIVIN 215 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCee-ec-----HHHHHHHhc---cCCEEEE
Confidence 4799999999 99999999999999998776664 455555565666432 11 122333333 3999999
Q ss_pred cCCCccH-HHHHHhcccCCEEEEEcCCCCC
Q 021311 204 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKK 232 (314)
Q Consensus 204 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~ 232 (314)
|+..... ...++.++++..++.++..++.
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~ 245 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGG 245 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCC
Confidence 9976554 5677889999999999865443
No 149
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.80 E-value=0.00019 Score=56.37 Aligned_cols=80 Identities=21% Similarity=0.227 Sum_probs=58.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc---EEEecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~---~~~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.|.+|||+|+++++|++.++-...+|-+||++.+ ++++++.++..-.+ .+.|-.+. ...+ +.++.......
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR----~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGR----NEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC----cHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 4789999999999999999999999999999985 78888888754432 23333322 1222 33334444559
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
+++++|+|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 999999984
No 150
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.75 E-value=0.00018 Score=62.13 Aligned_cols=109 Identities=19% Similarity=0.180 Sum_probs=76.8
Q ss_pred cceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcC---CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHH
Q 021311 88 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 164 (314)
Q Consensus 88 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~ 164 (314)
...+++|+.+..+.++... +.+.++.++...... -++.+|+|.|+ |.+|..+++.++..|++.+.+++. +.+
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r---~~~ 213 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANR---TYE 213 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeC---CHH
Confidence 5678889998888877665 667777776542222 47899999999 999999999999888776666653 444
Q ss_pred H-HHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccH
Q 021311 165 A-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 210 (314)
Q Consensus 165 ~-~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~ 210 (314)
+ .+.++.+|.. +++.. .+.+... ..|+||.|++.+..
T Consensus 214 ra~~la~~~g~~-~~~~~-----~~~~~l~---~aDvVi~at~~~~~ 251 (311)
T cd05213 214 RAEELAKELGGN-AVPLD-----ELLELLN---EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHHHcCCe-EEeHH-----HHHHHHh---cCCEEEECCCCCch
Confidence 4 4667778873 33321 2222222 38999999998765
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00098 Score=56.48 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=52.5
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hHHH-HHHHhcCCCCCcEEE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPALGF 202 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~~~-i~~~~~~~g~~d~v~ 202 (314)
+++||+|++|++|..+++.+...|++++++.+ +.++.+.+...+...+ .|..+. ..++ +.......+++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATAR----KAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 57999999999999999999899999998875 4455555544454332 344332 2333 222222334599999
Q ss_pred ecCCC
Q 021311 203 NCVGG 207 (314)
Q Consensus 203 d~~g~ 207 (314)
+++|.
T Consensus 78 ~~ag~ 82 (274)
T PRK05693 78 NNAGY 82 (274)
T ss_pred ECCCC
Confidence 99984
No 152
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=0.00045 Score=54.89 Aligned_cols=104 Identities=22% Similarity=0.265 Sum_probs=70.7
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCC
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~ 197 (314)
+...++++++||-+|+ +.|+.++-+++..+ +|+.+-+.+.--+..+..++.+|...+.....+- .+.+... +.
T Consensus 66 ~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG---~~G~~~~-aP 138 (209)
T COG2518 66 QLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG---SKGWPEE-AP 138 (209)
T ss_pred HHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc---ccCCCCC-CC
Confidence 4578999999999997 45899998999887 7777774321112234445678875433222111 1111112 25
Q ss_pred CcEEEecCCCccH-HHHHHhcccCCEEEEEcC
Q 021311 198 PALGFNCVGGNSA-SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 198 ~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~ 228 (314)
||.|+-+++.+.. ...++.|++||++|..-.
T Consensus 139 yD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 139 YDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred cCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 9999998888777 788899999999998764
No 153
>PRK06182 short chain dehydrogenase; Validated
Probab=97.64 E-value=0.0014 Score=55.59 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=53.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hHHH-HHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
.+++++|+|++|.+|..+++.+...|++++++.+ +.++.+.+...+...+ .|..+. .++. +.+.....+++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAAR----RVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3689999999999999999998889999998885 4455444444443322 233332 2222 3333333345999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
+++++|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999984
No 154
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00077 Score=58.95 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE---EecChh-hHHHH-HHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV---FTESQL-EVKNV-KGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~---~~~~~~-~~~~i-~~~~~~~g~~ 198 (314)
.+++++|+|++|++|..+++.+...|++++.+.+.....++..+.+++.|.... .|..+. .++++ .+.....|++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 468999999999999999998888999998887532111111223344554432 233222 22322 2222223469
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
No 155
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.61 E-value=0.00059 Score=54.00 Aligned_cols=93 Identities=20% Similarity=0.337 Sum_probs=65.0
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|+|+||+|.+|..+++.+...|.+++++++. +++.+. ..+. .++..+-.+.+.+.+...+ +|+||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~----~~~~~~--~~~~-~~~~~d~~d~~~~~~al~~---~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS----PSKAED--SPGV-EIIQGDLFDPDSVKAALKG---ADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESS----GGGHHH--CTTE-EEEESCTTCHHHHHHHHTT---SSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecC----chhccc--cccc-ccceeeehhhhhhhhhhhh---cchhhhhhhh
Confidence 7899999999999999999999999999974 333333 3333 3444444444566666654 9999999985
Q ss_pred c-----cHHHHHHhcccCC--EEEEEcCCC
Q 021311 208 N-----SASKVLKFLSQGG--TMVTYGGMS 230 (314)
Q Consensus 208 ~-----~~~~~~~~l~~~G--~~v~~g~~~ 230 (314)
. .....++.++..| +++.++...
T Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 71 PPKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred hcccccccccccccccccccccceeeeccc
Confidence 2 2356666665544 888877544
No 156
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0014 Score=55.65 Aligned_cols=80 Identities=16% Similarity=0.148 Sum_probs=52.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hHHHHHH-HhcC-CCCCc
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKG-LLAN-LPEPA 199 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~~~i~~-~~~~-~g~~d 199 (314)
.+++++|+|++|.+|.++++.+...|++++++.+ +.+..+.+...+...+ .|..+. ..+.+.+ .... .+.+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r----~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR----KEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 4679999999999999999988889999998885 4555555555454332 233332 2222222 2111 12599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++++++|.
T Consensus 79 ~li~~Ag~ 86 (277)
T PRK05993 79 ALFNNGAY 86 (277)
T ss_pred EEEECCCc
Confidence 99999874
No 157
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.58 E-value=0.00097 Score=61.45 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=67.0
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-H---h-----CCC-----cEEEecChh
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K---G-----LGA-----DEVFTESQL 183 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~---~-----lg~-----~~~~~~~~~ 183 (314)
...+.+.|+++||+||+|.+|..+++.+...|++++++++. .++.+.+ . . .|. ..++..+-.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt 148 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE 148 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence 33567789999999999999999999988899999988863 3333222 1 1 121 112222222
Q ss_pred hHHHHHHHhcCCCCCcEEEecCCCcc----------------HHHHHHhccc--CCEEEEEcCCC
Q 021311 184 EVKNVKGLLANLPEPALGFNCVGGNS----------------ASKVLKFLSQ--GGTMVTYGGMS 230 (314)
Q Consensus 184 ~~~~i~~~~~~~g~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 230 (314)
+.+.+.+..+ ++|+||.|+|... ...+++.+.. .++||++++..
T Consensus 149 D~esI~~aLg---giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 149 KPDQIGPALG---NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred CHHHHHHHhc---CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 2344555443 4999999998631 1233444433 36999988654
No 158
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.56 E-value=0.00058 Score=56.77 Aligned_cols=81 Identities=22% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-----EE--ecCh-hhHHHHHHHhc
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-----VF--TESQ-LEVKNVKGLLA 193 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~-----~~--~~~~-~~~~~i~~~~~ 193 (314)
..++++||+||++++|...+..+...|.+++.+.| ++++++.+ +++...+ ++ |..+ ...+.+...+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR----~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVAR----REDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence 46789999999999999999999999999999996 66666555 3333222 33 3222 23345554443
Q ss_pred CC-CCCcEEEecCCC
Q 021311 194 NL-PEPALGFNCVGG 207 (314)
Q Consensus 194 ~~-g~~d~v~d~~g~ 207 (314)
.. +.+|+.+||+|.
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 33 359999999995
No 159
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.55 E-value=0.0023 Score=57.76 Aligned_cols=152 Identities=18% Similarity=0.186 Sum_probs=90.9
Q ss_pred ccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC---------CCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHH
Q 021311 43 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS---------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 113 (314)
Q Consensus 43 ~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 113 (314)
..-|+|+++.+.+|++++++.-.|+.=+ +.+. .|+....+.-=-...+++|+.+..+.+. ...+.+.++
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI-lgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i-~~~~~Sv~~ 167 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQI-LGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGI-GAGAVSVAS 167 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCC-CCCCcCHHH
Confidence 4569999999999999998866666322 1111 1111111000001234555555443332 233566677
Q ss_pred HHHHHhhc---CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEEecChhhHHHHH
Q 021311 114 RMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVK 189 (314)
Q Consensus 114 ~~l~~~~~---~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~i~ 189 (314)
.++..... -.++++|+|+|+ |.+|.++++.++..|+..+.++.. +.++ .+.++.+|.. +++. +.+.
T Consensus 168 ~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r---~~~ra~~la~~~g~~-~~~~-----~~~~ 237 (423)
T PRK00045 168 AAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR---TLERAEELAEEFGGE-AIPL-----DELP 237 (423)
T ss_pred HHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCc-EeeH-----HHHH
Confidence 77654222 257899999999 999999999999999865555543 4444 3466777753 3322 1222
Q ss_pred HHhcCCCCCcEEEecCCCcc
Q 021311 190 GLLANLPEPALGFNCVGGNS 209 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~~ 209 (314)
+... ++|+||+|++.+.
T Consensus 238 ~~l~---~aDvVI~aT~s~~ 254 (423)
T PRK00045 238 EALA---EADIVISSTGAPH 254 (423)
T ss_pred HHhc---cCCEEEECCCCCC
Confidence 2222 3999999999754
No 160
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.0013 Score=55.66 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.5
Q ss_pred CCCEEEEcCCCc--HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g--~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.++.+||+|+++ ++|.++++.+...|++++.+.+... ..++.+.+ +++|....+ |-.+. .++. +.+.....|
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 468999999975 9999999988889999988764211 11222222 345543333 22222 2222 222223334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++|+|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 69999999984
No 161
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.0016 Score=54.78 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEEecC--h-hhHHHH-HHHhcCCC
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTES--Q-LEVKNV-KGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~~~~~~--~-~~~~~i-~~~~~~~g 196 (314)
.++++||+|++ +++|.++++.+...|++++++.+... ..+..+. .++++....+..+ + ...+++ .+.....|
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999997 48999999888889999887764311 1122222 2344433333222 2 222222 22222234
Q ss_pred CCcEEEecCCCcc------------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 197 EPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 197 ~~d~v~d~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++|++++|+|... ...++..|+.+|+++.+++..
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 6999999997410 123455666678998887543
No 162
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0005 Score=59.94 Aligned_cols=80 Identities=26% Similarity=0.308 Sum_probs=52.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEE-E--ecChh-hHHHHHH-HhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKNVKG-LLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~~-~--~~~~~-~~~~i~~-~~~~ 194 (314)
.++++||+|+++++|.++++.+...|++++.+.+. +++.+ .+++.|.+.. + |-.+. .++++.+ ....
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARD----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999888753 33332 3344565432 2 33221 2222222 1122
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.|++|++++|+|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 2359999999984
No 163
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.002 Score=54.26 Aligned_cols=80 Identities=21% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhC-CCc-EEE--ecChh-hHHHHHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL-GAD-EVF--TESQL-EVKNVKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~l-g~~-~~~--~~~~~-~~~~i~~~~~~ 194 (314)
.++++||+|+++++|.++++.+...|++++++.+. .++.+.+ +.. +.. ..+ |-.+. ..+.+.+....
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRN----EENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 47899999999999999999999999998887753 3332222 221 322 222 22222 22222222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.|++|++++++|.
T Consensus 83 ~g~iD~lv~nag~ 95 (263)
T PRK08339 83 IGEPDIFFFSTGG 95 (263)
T ss_pred hCCCcEEEECCCC
Confidence 3469999999985
No 164
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.46 E-value=0.0023 Score=54.29 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=65.2
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.++++||+|++ +++|+++++.+...|++++.+.+.. ...++.+.+ .+++....+ |-.+. ..+. +.+.....|
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999996 6999999988888999988776431 112233332 345543322 33322 2222 222233334
Q ss_pred CCcEEEecCCCc------------------------------cHHHHHHhcccCCEEEEEcCCC
Q 021311 197 EPALGFNCVGGN------------------------------SASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 197 ~~d~v~d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++|++++++|.. ....+++.|+.+|+++.+++..
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 699999999841 0133555677789999987543
No 165
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0018 Score=53.95 Aligned_cols=84 Identities=17% Similarity=0.077 Sum_probs=50.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHHHHH-HhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKNVKG-LLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~i~~-~~~~~g~~ 198 (314)
.+++++|+|++|.+|..++..+...|++++.+.+.....++..+.++..+... .+ |-.+. .++++.+ .....+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999888899998888643111111122223334332 22 22221 2222222 22222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 166
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.44 E-value=0.001 Score=55.58 Aligned_cols=105 Identities=19% Similarity=0.195 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-E--E--Ee
Q 021311 109 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-E--V--FT 179 (314)
Q Consensus 109 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~~-~--~--~~ 179 (314)
=..++..+....+++||+++|=+|+ +-|.+++.+|+..|++|++++- +++..+.+ ++.|.. . + -|
T Consensus 57 Q~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTl----S~~Q~~~~~~r~~~~gl~~~v~v~l~d 130 (283)
T COG2230 57 QRAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTL----SEEQLAYAEKRIAARGLEDNVEVRLQD 130 (283)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeC----CHHHHHHHHHHHHHcCCCcccEEEecc
Confidence 3456667778899999999999998 5688999999999999999995 55554444 455654 1 1 12
Q ss_pred cChhhHHHHHHHhcCCCCCcEEE-----ecCCCcc----HHHHHHhcccCCEEEEEcCCC
Q 021311 180 ESQLEVKNVKGLLANLPEPALGF-----NCVGGNS----ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 180 ~~~~~~~~i~~~~~~~g~~d~v~-----d~~g~~~----~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+++. .. .||-|+ +-+|.+. +..+.+.|+++|++++-....
T Consensus 131 ~rd~--------~e---~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 131 YRDF--------EE---PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred cccc--------cc---ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 2221 11 377764 3445533 367888999999998876443
No 167
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0013 Score=54.68 Aligned_cols=78 Identities=23% Similarity=0.325 Sum_probs=51.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-EecChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
.+++++|+|++|.+|..+++.+...|++++++.+ +.++.+.+ +..+...+ .|..+ .+.+.+.....+++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAAR----NAAALDRLAGETGCEPLRLDVGD--DAAIRAALAAAGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHHhCCCCEE
Confidence 5689999999999999999999999999888775 33333333 34444322 23332 22333333333359999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
|.++|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999985
No 168
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.40 E-value=0.0035 Score=52.58 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=51.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-E--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|..+++.+...|++++++.+......+..+.++..+.... + |-.+. ..++ +.......+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999998887643222222333444554432 2 22221 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
No 169
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0029 Score=53.59 Aligned_cols=82 Identities=18% Similarity=0.167 Sum_probs=48.4
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE----EEecChh-hHHHH-HHHhcCCCCCc
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE----VFTESQL-EVKNV-KGLLANLPEPA 199 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~----~~~~~~~-~~~~i-~~~~~~~g~~d 199 (314)
++++|+|++|++|..+++.+...|++++.+.+.....++..+.+...+... ..|..+. ..+++ .+.....+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 378999999999999999888899998877643111111122223334331 2343332 22222 22222233599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++.++|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999985
No 170
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.39 E-value=0.0013 Score=49.36 Aligned_cols=94 Identities=16% Similarity=0.188 Sum_probs=58.3
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCc--EEEecChhhHHHHHHHhcCCCCCc
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPA 199 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~--~~~~~~~~~~~~i~~~~~~~g~~d 199 (314)
-.+++++|.|+ |++|.+++..+...|++.+.++.. +.++. +.++.++.. ..++..+ +.+... ++|
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR---t~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~---~~D 77 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR---TPERAEALAEEFGGVNIEAIPLED-----LEEALQ---EAD 77 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES---SHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH---TES
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC---CHHHHHHHHHHcCccccceeeHHH-----HHHHHh---hCC
Confidence 35899999999 999999999999999986655543 44443 344555332 2333333 222222 499
Q ss_pred EEEecCCCccH---HHHHHhccc-CCEEEEEcC
Q 021311 200 LGFNCVGGNSA---SKVLKFLSQ-GGTMVTYGG 228 (314)
Q Consensus 200 ~v~d~~g~~~~---~~~~~~l~~-~G~~v~~g~ 228 (314)
++++|++.... ...+....+ -+.++.++.
T Consensus 78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 78 IVINATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred eEEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 99999988654 333333332 257777763
No 171
>PRK06196 oxidoreductase; Provisional
Probab=97.39 E-value=0.0026 Score=55.19 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=50.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcEEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|++|.+++..+...|++++.+.+. .++.+. ...+.....+ |-.+. .++. +.+.....+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~----~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR----PDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999998888889999888753 333322 2223222222 22222 2222 22222223359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 101 D~li~nAg~ 109 (315)
T PRK06196 101 DILINNAGV 109 (315)
T ss_pred CEEEECCCC
Confidence 999999984
No 172
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0039 Score=52.44 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=50.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.+++++|+|+++.+|.++++.+...|++++.+.+ +.++. +..+.++... .+ |..+. ..++ +.+.....+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDI----DADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999889999888875 33333 2334444321 22 22221 2222 2222222345
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 173
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.36 E-value=0.0021 Score=53.74 Aligned_cols=84 Identities=19% Similarity=0.260 Sum_probs=57.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EEecCh-hhHHH-HHHHhcCCCCCc
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQ-LEVKN-VKGLLANLPEPA 199 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--~~~~~~-~~~~~-i~~~~~~~g~~d 199 (314)
.|+.|||+|+++++|.+.++=...+|++++.+.-...+.++..+.++..|..+ ..|-.+ +.+.+ .++.....|.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 68999999999999999887777779977666666556777778887776333 333332 22222 222223334599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++|++|-
T Consensus 117 ILVNNAGI 124 (300)
T KOG1201|consen 117 ILVNNAGI 124 (300)
T ss_pred EEEecccc
Confidence 99999994
No 174
>PRK06128 oxidoreductase; Provisional
Probab=97.35 E-value=0.0042 Score=53.45 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=63.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC--cHHHHHHHHhCCCcEE-E--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~~~lg~~~~-~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.++++||+|+++.+|.+++..+...|++++++...... .++..+.++..+.... + |..+. ..++ +.+.....+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999998888899998876543110 1112233344454322 2 22221 2222 222222233
Q ss_pred CCcEEEecCCCcc---------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 197 EPALGFNCVGGNS---------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 197 ~~d~v~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++|+++.++|... .+.+++.|+.+|++|.+++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 5999999998410 123445566788999887543
No 175
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0052 Score=51.12 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|..++..+...|.+++++.+......+. ...++..+... .+ |..+. ..+. +.+.....++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 368999999999999999998888899998887542111111 11223333321 22 33222 2222 2222222235
Q ss_pred CcEEEecCCCc--------------------cHHHHHHhcccCCEEEEEcC
Q 021311 198 PALGFNCVGGN--------------------SASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 198 ~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 228 (314)
+|+++.+++.. .++.+.+.+..+|++|.+++
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 99999988642 11344455556789998875
No 176
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0051 Score=51.79 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=50.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC-CC-c-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-D-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l-g~-~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.+++++|+|+++++|.+.++.+...|++++.+.+.....++..+.+... +. . ..+ |-.+. .+++ +.+.....+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999988876321111112222221 11 1 112 32222 2222 222222334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 177
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0026 Score=52.51 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC---CcEEE--ecChh-hHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG---ADEVF--TESQL-EVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg---~~~~~--~~~~~-~~~~-i~~~~~~~ 195 (314)
.+.+++|+|++|.+|..+++.+...|++++++.+. +++.. ..+.+. ..+.+ |..+. .+.. +.+.....
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARD----QKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC----HHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999998888889998888753 33322 223332 12222 22221 2222 22222222
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|++|.++|.
T Consensus 81 ~~~d~vi~~ag~ 92 (237)
T PRK07326 81 GGLDVLIANAGV 92 (237)
T ss_pred CCCCEEEECCCC
Confidence 359999999875
No 178
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.30 E-value=0.00037 Score=58.75 Aligned_cols=101 Identities=24% Similarity=0.295 Sum_probs=60.3
Q ss_pred HHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc--EEEecChhhH
Q 021311 112 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--EVFTESQLEV 185 (314)
Q Consensus 112 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~~--~~~~~~~~~~ 185 (314)
-+..+.+.+++++|++||-+|+ | .|..+..+|+..|+++.+++- +++..+.+ ++.|.. ..+...+
T Consensus 50 k~~~~~~~~~l~~G~~vLDiGc-G-wG~~~~~~a~~~g~~v~gitl----S~~Q~~~a~~~~~~~gl~~~v~v~~~D--- 120 (273)
T PF02353_consen 50 KLDLLCEKLGLKPGDRVLDIGC-G-WGGLAIYAAERYGCHVTGITL----SEEQAEYARERIREAGLEDRVEVRLQD--- 120 (273)
T ss_dssp HHHHHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-----HHHHHHHHHHHHCSTSSSTEEEEES----
T ss_pred HHHHHHHHhCCCCCCEEEEeCC-C-ccHHHHHHHHHcCcEEEEEEC----CHHHHHHHHHHHHhcCCCCceEEEEee---
Confidence 3455667789999999999998 4 788888999999999999994 55555554 455532 2222221
Q ss_pred HHHHHHhcCCCCCcEEEec-----CCCcc----HHHHHHhcccCCEEEEE
Q 021311 186 KNVKGLLANLPEPALGFNC-----VGGNS----ASKVLKFLSQGGTMVTY 226 (314)
Q Consensus 186 ~~i~~~~~~~g~~d~v~d~-----~g~~~----~~~~~~~l~~~G~~v~~ 226 (314)
.+++.. +||.|+.. +|.+. +..+.+.|+|+|++++-
T Consensus 121 --~~~~~~---~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 121 --YRDLPG---KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp --GGG------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --ccccCC---CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 112222 49998654 44332 36788899999998754
No 179
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0018 Score=55.55 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=51.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cE-E--EecChh-hHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DE-V--FTESQL-EVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~--~~-~--~~~~~~-~~~~-i~~~~~~~ 195 (314)
.++++||+|++|++|.++++.+...|++++++.+ ++++.+ ..++++. .. . .|-.+. .+++ +.+.....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDL----EEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999888875 344433 3344542 11 1 233322 2222 22222223
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|++++++|.
T Consensus 84 g~id~vI~nAG~ 95 (296)
T PRK05872 84 GGIDVVVANAGI 95 (296)
T ss_pred CCCCEEEECCCc
Confidence 469999999985
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0065 Score=55.49 Aligned_cols=83 Identities=11% Similarity=0.139 Sum_probs=53.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChh-hHHHHHHH-hcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQL-EVKNVKGL-LANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~-~~~~i~~~-~~~~g~~d~ 200 (314)
+++++||+|++|++|..+++.+...|++++++.+.. ..+...+...+++... ..|..+. ..+.+.+. ....+++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA-AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc-cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 578999999999999999999999999998876531 1222233334555432 2344332 23333332 222335999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
+|.++|.
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9999984
No 181
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.005 Score=51.71 Aligned_cols=83 Identities=13% Similarity=0.073 Sum_probs=50.7
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc--EEE--ecChh-hHHH-HHHHhcC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD--EVF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~--~~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.-+++++||+|++|.+|..++..+...|++++++.+. ++..+.+ ...... ..+ |-.+. ..++ +.+....
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS----EAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4577999999999999999999998999998888853 3332222 222211 222 22221 1222 1111111
Q ss_pred CCCCcEEEecCCCc
Q 021311 195 LPEPALGFNCVGGN 208 (314)
Q Consensus 195 ~g~~d~v~d~~g~~ 208 (314)
.+++|.|+.++|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 23599999999854
No 182
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.23 E-value=0.0062 Score=48.75 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=48.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC----CCcEE-EecChhhHHHHHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEV-FTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~l----g~~~~-~~~~~~~~~~i~~~~~~~g~ 197 (314)
.+.+++|+|++|.+|..++..+...|++++.+.+ +.++.+.+ ..+ +.... .+.. ..+++.+... +
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R----~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~---~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR----DLERAQKAADSLRARFGEGVGAVETS--DDAARAAAIK---G 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhhcCCcEEEeeCC--CHHHHHHHHh---c
Confidence 5789999999999999998888888888877764 33433332 222 22211 1222 2223333333 3
Q ss_pred CcEEEecCCCcc
Q 021311 198 PALGFNCVGGNS 209 (314)
Q Consensus 198 ~d~v~d~~g~~~ 209 (314)
.|+||.++....
T Consensus 98 ~diVi~at~~g~ 109 (194)
T cd01078 98 ADVVFAAGAAGV 109 (194)
T ss_pred CCEEEECCCCCc
Confidence 999999988765
No 183
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0066 Score=50.93 Aligned_cols=78 Identities=18% Similarity=0.129 Sum_probs=48.7
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC-Cc-EE--EecChh-hHHH-HHHHhcC-CCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-AD-EV--FTESQL-EVKN-VKGLLAN-LPE 197 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg-~~-~~--~~~~~~-~~~~-i~~~~~~-~g~ 197 (314)
+++||+|++|.+|..+++.+...|++++.+.+ +.+..+.+ ..++ .. .. .|-.+. .+.+ +...... .++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDI----NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999988888999988875 34444333 2232 11 22 233322 2222 2222211 235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.|+|.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 184
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0042 Score=52.21 Aligned_cols=83 Identities=14% Similarity=0.231 Sum_probs=49.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-E--ecChh-hHHH-HHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~--~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
++++||+|++|.+|..+++.+...|++++++.+.....++..+.++..+.... + |..+. .... +.+.....+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999998888999998888532111111222333444322 2 22221 1222 222222223599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++.|+|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999975
No 185
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0024 Score=54.77 Aligned_cols=80 Identities=20% Similarity=0.315 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecCh-hhHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~ 194 (314)
.+++++|+|++|++|.+.++.+...|++++++.+. .++.+ .+...+... .+ |-.+ ...++ +.+....
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~----~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARR----EDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999888889999888853 33332 222333322 22 2222 12222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|++++|+|.
T Consensus 115 ~g~id~li~~AG~ 127 (293)
T PRK05866 115 IGGVDILINNAGR 127 (293)
T ss_pred cCCCCEEEECCCC
Confidence 3359999999985
No 186
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0051 Score=51.17 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=49.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCC--Cc-EEE--ecCh-hhHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVF--TESQ-LEVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg--~~-~~~--~~~~-~~~~~-i~~~~~~~ 195 (314)
.++++||+|++|.+|..+++.+...|++++++.+. .++.+.+ ..+. .. ..+ |..+ ..++. +.+.....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN----EEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46799999999999999998888889998888864 3332222 2222 21 122 2222 12222 22222223
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|+++.++|.
T Consensus 80 ~~~d~vi~~ag~ 91 (251)
T PRK07231 80 GSVDILVNNAGT 91 (251)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 187
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0045 Score=52.05 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=49.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC--CCc-EEE--ecChh-hHHHHHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GAD-EVF--TESQL-EVKNVKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~l--g~~-~~~--~~~~~-~~~~i~~~~~~~g 196 (314)
+++++||+|++|.+|...+..+...|++++++.+. +++.+.+ .++ +.. ..+ |-.+. ..+.+.+.....+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN----AEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 46889999999999999998888899999888853 3333322 222 211 222 22221 2222222222133
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|+++.++|.
T Consensus 80 ~id~lv~~ag~ 90 (263)
T PRK09072 80 GINVLINNAGV 90 (263)
T ss_pred CCCEEEECCCC
Confidence 59999999885
No 188
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.18 E-value=0.011 Score=49.37 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=51.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hHHH-HHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
.+++++|+|++|++|.++++.+...|++++.+.+. +++..+.++..+...+ .|-.+. ..++ +.+.....+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS---AENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999888899998877643 3333344443332221 232222 2222 2222223345999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.|+|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999975
No 189
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0067 Score=50.85 Aligned_cols=84 Identities=20% Similarity=0.229 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHhCCCcEE---EecChh-hHHHHHH-HhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEV---FTESQL-EVKNVKG-LLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~lg~~~~---~~~~~~-~~~~i~~-~~~~~g~ 197 (314)
.+++++|+|++|.+|..+++.+...|++ ++.+.+.........+.++..+.... .|..+. .++++.+ .....++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999999 66665421111111223334444321 233322 2222222 2222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 190
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.16 E-value=0.0074 Score=48.50 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=60.6
Q ss_pred hhcCCCCCEEEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCC-CcEEEecChhhHHHHHHH
Q 021311 119 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLG-ADEVFTESQLEVKNVKGL 191 (314)
Q Consensus 119 ~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~lg-~~~~~~~~~~~~~~i~~~ 191 (314)
...+.++++++-.|+ |. |..++.+++..+ .+++++- . +++..+.+ +.++ .+.+.....+..+.+..
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD-~---~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~- 107 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVD-K---DEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFT- 107 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEE-C---CHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhh-
Confidence 367899999999999 55 888888888764 3455544 3 55555544 3455 22222111111111222
Q ss_pred hcCCCCCcEEEecCCCcc----HHHHHHhcccCCEEEEE
Q 021311 192 LANLPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTY 226 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~----~~~~~~~l~~~G~~v~~ 226 (314)
.. +.+|.||...+... +..+.+.|+++|+++..
T Consensus 108 ~~--~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 IN--EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred cC--CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 11 25999998665432 36777889999999853
No 191
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.16 E-value=0.022 Score=45.92 Aligned_cols=115 Identities=10% Similarity=0.042 Sum_probs=68.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|++|||.|+ |.+|..-++.+...|++++++... .......+...|.-..+ ..+.....+ . ++|+||-
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~---~~~~l~~l~~~~~i~~~-~~~~~~~dl----~---~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE---LESELTLLAEQGGITWL-ARCFDADIL----E---GAFLVIA 75 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC---CCHHHHHHHHcCCEEEE-eCCCCHHHh----C---CcEEEEE
Confidence 4689999999 999999999999999988776642 22223333333321221 222211111 1 4999999
Q ss_pred cCCCccH-HHHHHhcccCCEEEEEcCCCCCCcccccccceec-ceEEEEE
Q 021311 204 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGF 251 (314)
Q Consensus 204 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (314)
+++.+.. .......+..|..|........ .++..+..+.+ ++++.-+
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~d~~e~-~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVVDDPEL-CSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEECCCccc-CeEEEeeEEEcCCEEEEEE
Confidence 9998755 4555666677887776533222 23444444444 4555444
No 192
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.16 E-value=0.0061 Score=50.62 Aligned_cols=82 Identities=21% Similarity=0.141 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH---HHHHHhCCCcEE---EecChh-hHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA---KEKLKGLGADEV---FTESQL-EVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~~~lg~~~~---~~~~~~-~~~~-i~~~~~~~ 195 (314)
.++++||+|++|.+|..+++.+...|+++++..+.. .... .+.++..+.... .|..+. ..++ +.+.....
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN--SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC--hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 368899999999999999999999999988765431 2222 222333454432 222221 2222 22222222
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|+++.|+|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 193
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.16 E-value=0.011 Score=49.50 Aligned_cols=106 Identities=15% Similarity=0.225 Sum_probs=63.3
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhC-CCc-EEE--ecCh-hhHHH-HHHHhcC
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-GAD-EVF--TESQ-LEVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~l-g~~-~~~--~~~~-~~~~~-i~~~~~~ 194 (314)
.+++++|+|++ +++|.++++.+...|++++.+.+.. ..+++.+.+ .++ +.. ..+ |-.+ ..++. +.+....
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999996 7999999988888999988775421 123333333 333 222 122 2222 22222 2223333
Q ss_pred CCCCcEEEecCCCc-------c-----------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 195 LPEPALGFNCVGGN-------S-----------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 195 ~g~~d~v~d~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.|++|++++|+|.. . ....++.|+++|++|.+++..
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 34699999998731 0 012345566789999988654
No 194
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.15 E-value=0.007 Score=50.61 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=62.1
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEE--ecCh-hhHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVF--TESQ-LEVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~~~--~~~~-~~~~~-i~~~~~~~ 195 (314)
.+++++|+|++ +++|.++++.+...|++++.+.+. ++..+.++++... ..+ |-.+ ...++ +.+.....
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN----DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc----hHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 57899999997 699999998888899999887642 2222233333221 122 2222 12222 22222223
Q ss_pred CCCcEEEecCCCcc------------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 196 PEPALGFNCVGGNS------------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 196 g~~d~v~d~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
|++|++++++|... ...+++.|+.+|+++.+++..
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 46999999997410 023345566779999887544
No 195
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.15 E-value=0.044 Score=49.47 Aligned_cols=143 Identities=17% Similarity=0.239 Sum_probs=87.7
Q ss_pred ccCCcceEEEEEEecCCCCCCCCCCEEeeCCCC-----------------CCcccceEeeeccceEE---c-CCCCCHHH
Q 021311 43 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS-----------------SGTWQSYVVKDQSVWHK---V-SKDSPMEY 101 (314)
Q Consensus 43 ~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~-----------------~g~~~~~~~~~~~~~~~---~-p~~~~~~~ 101 (314)
..-|.|+++.+.+|++++++.-.|+.-+ +.+. .+.|++++.++. .+.. + +..++...
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~ 165 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISS 165 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHH
Confidence 4568899999999999998866666332 1110 456777776665 2222 2 22333222
Q ss_pred hhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEEec
Q 021311 102 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVFTE 180 (314)
Q Consensus 102 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~~~lg~~~~~~~ 180 (314)
+ |.....+.....++++++|+|+ |.+|..+++.++..|+..+.+++. +.++ .+.++.+|.. .++.
T Consensus 166 ~---------Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r---s~~ra~~la~~~g~~-~i~~ 231 (417)
T TIGR01035 166 A---------AVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR---TYERAEDLAKELGGE-AVKF 231 (417)
T ss_pred H---------HHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC---CHHHHHHHHHHcCCe-EeeH
Confidence 2 1111223344567899999999 999999999999999655545433 4444 3466677764 2222
Q ss_pred ChhhHHHHHHHhcCCCCCcEEEecCCCcc
Q 021311 181 SQLEVKNVKGLLANLPEPALGFNCVGGNS 209 (314)
Q Consensus 181 ~~~~~~~i~~~~~~~g~~d~v~d~~g~~~ 209 (314)
. .+.+... ++|+||+|++.+.
T Consensus 232 ~-----~l~~~l~---~aDvVi~aT~s~~ 252 (417)
T TIGR01035 232 E-----DLEEYLA---EADIVISSTGAPH 252 (417)
T ss_pred H-----HHHHHHh---hCCEEEECCCCCC
Confidence 1 2222222 3999999998754
No 196
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0027 Score=53.08 Aligned_cols=77 Identities=14% Similarity=0.039 Sum_probs=49.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEecChhhHHHHHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~~-~~~~~~~~~~~i~~~~~~~g~~d 199 (314)
++++||+|++|.+|..+++.+...|++++++++. ..+... .+..+... ++..+-.+.+.+.....+ ++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW--DVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC--CCC
Confidence 4689999999999999999999999999998863 332222 22333221 221121122344443333 499
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++|.|+|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999984
No 197
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.14 E-value=0.0025 Score=53.07 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~~ 198 (314)
+++++||+|++|.+|..+++.+...|++++.+.+.....++..+.++..+... .+ |-.+ ..+++ +.......+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999899998777743211111222233344432 22 2222 22223 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999883
No 198
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.11 E-value=0.012 Score=49.33 Aligned_cols=83 Identities=18% Similarity=0.263 Sum_probs=50.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE---EEecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE---VFTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~---~~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|.++++.+...|++++.+.+.. ...+..+.+...+.+. ..|..+. ...+ +.+.....+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999998888999988776431 1111222233334332 1233322 2222 33333333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999973
No 199
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0041 Score=51.29 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=50.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecCh-hhHHHH-HHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNV-KGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~-~~~~~i-~~~~~~~g~~d~ 200 (314)
+++++||+|++|.+|..+++.+...|++++.+.+......+..+..+..+...+ .|..+ ...+.+ .+.....+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999988888899998888642222222223333333221 22222 122222 222222335999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999874
No 200
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0037 Score=52.28 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=51.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE-EEecChh-hHHH-HHHHhcCCCCCc
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VFTESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~~~-~~~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
.+++++|+|++|.+|..+++.+...|++++++.+ +..+.+ ....++... ..|..+. ..++ +.+.....+++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI----DPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999889999988875 333332 233444322 2233332 2222 222222233599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 201
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0068 Score=51.45 Aligned_cols=83 Identities=17% Similarity=0.166 Sum_probs=49.7
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--c-EEE--ecChh-hHHHHHHHhcCCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--D-EVF--TESQL-EVKNVKGLLANLPEP 198 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~-~~~--~~~~~-~~~~i~~~~~~~g~~ 198 (314)
++++||+|++|.+|...+..+...|++++++.+.....++..+.....+. . ..+ |..+. .++.+.+.....+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 57899999999999999988888899999887532111111122222221 1 222 32222 222233333333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 202
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0038 Score=52.41 Aligned_cols=80 Identities=23% Similarity=0.286 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHh-CCCc-EEEecChhhHHHHHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD-EVFTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-lg~~-~~~~~~~~~~~~i~~~~~~~g~ 197 (314)
.+++++|+|+++++|...++.+...|++++++.+. .++.+. +.. .+.. ..+..+-.+.+.+.+.....++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 47899999999999999999888899998888753 333222 222 2322 2222222222333333333346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.|+|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 203
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.06 E-value=0.029 Score=45.16 Aligned_cols=115 Identities=11% Similarity=0.086 Sum_probs=65.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|++|||.|+ |.+|...+..+...|++++++... ..++-.+.+.. +. .....+......+ .++|+||-
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~--~~~~l~~l~~~-~~-i~~~~~~~~~~~l-------~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE--LTENLVKLVEE-GK-IRWKQKEFEPSDI-------VDAFLVIA 76 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC--CCHHHHHHHhC-CC-EEEEecCCChhhc-------CCceEEEE
Confidence 5789999999 999999888888889888766532 12222233332 21 1121221111111 14999999
Q ss_pred cCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccceec-ceEEEEE
Q 021311 204 CVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGF 251 (314)
Q Consensus 204 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (314)
|++.+..+..+......+.+|.....+. ..++..+..+.+ ++++.-+
T Consensus 77 aT~d~elN~~i~~~a~~~~lvn~~d~~~-~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 77 ATNDPRVNEQVKEDLPENALFNVITDAE-SGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred cCCCHHHHHHHHHHHHhCCcEEECCCCc-cCeEEEeeEEEcCCeEEEEE
Confidence 9999888655554444566666653322 233444444444 4555443
No 204
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.06 E-value=0.0097 Score=53.23 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=63.0
Q ss_pred cCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHH---HHHHHHhCCCcEEEecChhhHHHHHHHhcCCC-
Q 021311 121 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE---AKEKLKGLGADEVFTESQLEVKNVKGLLANLP- 196 (314)
Q Consensus 121 ~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g- 196 (314)
+-..+.+|||+|++|.+|..++..+...|.+++++++...+... ..+.........++..+-.+.+.+.+...+.+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 34567899999999999999998888889999998864321110 11111112212222222112234444333221
Q ss_pred CCcEEEecCCCcc------H-------HHHHHhcccC--CEEEEEcCCC
Q 021311 197 EPALGFNCVGGNS------A-------SKVLKFLSQG--GTMVTYGGMS 230 (314)
Q Consensus 197 ~~d~v~d~~g~~~------~-------~~~~~~l~~~--G~~v~~g~~~ 230 (314)
++|+||+|++... + ..+++.++.. +++|.+++..
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 3999999987421 1 2344444433 4788887543
No 205
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.014 Score=49.89 Aligned_cols=107 Identities=18% Similarity=0.261 Sum_probs=63.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|..++..+...|++++.+.+..... +...+.++..+... .+ |-.+ ...++ +.+.....++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999988888899998877542111 11122233334332 22 2222 12222 2222222335
Q ss_pred CcEEEecCCCcc---------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 198 PALGFNCVGGNS---------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 198 ~d~v~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+|+++.++|... ...+++.+++.|++|.+++..
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 999999987410 022344556678999988643
No 206
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.05 E-value=0.0089 Score=48.40 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=68.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc--------------------HHHHHHHHhCCCcEEEecChh
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--------------------DEAKEKLKGLGADEVFTESQL 183 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~--------------------~~~~~~~~~lg~~~~~~~~~~ 183 (314)
...+|+|.|. |++|.+++..+.+.|...+.+.+.+.-. +--.+.++.+..+.-++..+.
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 3589999999 9999999999999999888877654311 111122333444433333333
Q ss_pred h--HHHHHHHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcCCCC
Q 021311 184 E--VKNVKGLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGGMSK 231 (314)
Q Consensus 184 ~--~~~i~~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~~~~ 231 (314)
+ .+.+.++... ++|+|+||..+-.. ..+..|.+.+=.++..++..+
T Consensus 108 f~t~en~~~~~~~--~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLLSK--GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHhcC--CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 2 2556666666 59999999988555 344456666667777765544
No 207
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0048 Score=51.59 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=50.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|..++..+...|++++.+.+.....++..+.++..+.+. .+ |-.+. ..++ +.+.....+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999998888899999888753211111122223334332 22 22221 2222 22222333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999984
No 208
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.04 E-value=0.013 Score=45.65 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=64.6
Q ss_pred hhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 102 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 102 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
....|+...++...+.+...--.+++|+|.|++..+|..++..++..|+++.++.+ +.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r----~~------------------ 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS----KT------------------ 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC----Cc------------------
Confidence 35556666666666666544568899999999334699899899889997655553 21
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+++.+... .+|+||.+++.+.. --.+.++++-.++.++.+.
T Consensus 79 ----~~l~~~l~---~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 79 ----KNLKEHTK---QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred ----hhHHHHHh---hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 11222222 39999999998653 2223466666777777443
No 209
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.04 E-value=0.0029 Score=53.13 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=48.0
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcEEEecC--h-hhHHH-HHHHhcCCCCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTES--Q-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~~~~~~--~-~~~~~-i~~~~~~~g~~ 198 (314)
++||+|+++++|.++++.+...|++++.+.+. +++.+ .++..+..+.+..+ + ...++ +.+.....+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRN----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999998888899998887753 33322 22233322333222 2 12222 22222233469
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999999984
No 210
>PRK09242 tropinone reductase; Provisional
Probab=97.03 E-value=0.011 Score=49.57 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.+++++|+|++|.+|..+++.+...|++++.+.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 47899999999999999999999999998888753
No 211
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.03 E-value=0.012 Score=49.66 Aligned_cols=97 Identities=18% Similarity=0.297 Sum_probs=70.9
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+.+..---.|++++|.|.+..+|.-+++++...|++++++-+. + .
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~---t-~------------------ 193 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR---S-K------------------ 193 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---c-h------------------
Confidence 45677777777777663323578999999997779999999999999999877731 1 0
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 230 (314)
++.+.+. ..|+||.++|.+.+ .. +.++++..++.+|...
T Consensus 194 ----~l~~~~~---~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 194 ----DMASYLK---DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ----hHHHHHh---hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1222222 39999999999754 22 4688998899998544
No 212
>PRK06484 short chain dehydrogenase; Validated
Probab=97.03 E-value=0.0063 Score=56.69 Aligned_cols=103 Identities=21% Similarity=0.296 Sum_probs=65.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE---EecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV---FTESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~---~~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|+++++|...++.+...|++++++.+ ++++.+.+ ..++.... .|..+. ..+. +.+.....|.
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR----DAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999988889999988875 34444333 33443321 232222 2222 2222223346
Q ss_pred CcEEEecCCCc----c-----------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 198 PALGFNCVGGN----S-----------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 198 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+|+++.|+|.. . ...++..|+.+|++|.+++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99999999842 0 123345556679999998653
No 213
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0055 Score=51.51 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=51.0
Q ss_pred CCCCCEEEEcCCCc-HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEE--E--ecChh-hHHHHHH-Hhc
Q 021311 122 LNSGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEV--F--TESQL-EVKNVKG-LLA 193 (314)
Q Consensus 122 ~~~~~~vlI~g~~g-~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~~--~--~~~~~-~~~~i~~-~~~ 193 (314)
+..++++||+|++| ++|.++++.+...|++++++.+.....++..+.+++ ++...+ + |..+. ..+++.+ ...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44579999999986 899999999999999988766432111122222222 443222 2 33222 2333222 222
Q ss_pred CCCCCcEEEecCCC
Q 021311 194 NLPEPALGFNCVGG 207 (314)
Q Consensus 194 ~~g~~d~v~d~~g~ 207 (314)
..|++|+++.|+|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 22469999999984
No 214
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.005 Score=51.28 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=48.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.+++++|+|++|++|.++++.+...|++++.+.+.. .+..+... .+....+..+-.+.+.+.+..+ ++|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~---~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK---INNSESND-ESPNEWIKWECGKEESLDKQLA---SLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc---hhhhhhhc-cCCCeEEEeeCCCHHHHHHhcC---CCCEEEE
Confidence 368999999999999999998889999998887532 12221111 1111222222222234444332 4999999
Q ss_pred cCCC
Q 021311 204 CVGG 207 (314)
Q Consensus 204 ~~g~ 207 (314)
|+|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9985
No 215
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0046 Score=52.06 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCc-EEE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~ 194 (314)
+++++||+|++|.+|..+++.+...|++++.+.+. .++.+. ++..+.. ..+ |..+. ..++ +.+....
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999888899999888753 333222 2222322 222 32222 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|++|+++|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 2359999999984
No 216
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.00 E-value=0.014 Score=49.08 Aligned_cols=107 Identities=11% Similarity=0.127 Sum_probs=62.9
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCC--CcHHHHHHHHhC-CCcEEE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRA--GSDEAKEKLKGL-GADEVF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~--~~~~~~~~~~~l-g~~~~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.+++++|+|++ +++|.+++..+...|++++.+.+... ..++..+.+.+. +....+ |-.+. ..+. +.+....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 79999999888889999877653221 122233333322 222222 22221 2222 2222222
Q ss_pred CCCCcEEEecCCCc--------c----------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 195 LPEPALGFNCVGGN--------S----------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 195 ~g~~d~v~d~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.|++|++++|+|.. . ...+++.|+.+|+++.+++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 34699999999831 0 123555667789999887643
No 217
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0056 Score=51.23 Aligned_cols=81 Identities=20% Similarity=0.187 Sum_probs=50.6
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCC-cEEE--ecCh-hhHHH-HHHHhc
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA-DEVF--TESQ-LEVKN-VKGLLA 193 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~-~~~~--~~~~-~~~~~-i~~~~~ 193 (314)
-.+++++|+|++|.+|..++..+...|++++++.+ ++++.+.+ ...+. ..++ |..+ ....+ +.+...
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR----RVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999889999888875 34443322 12222 2223 2222 12222 222222
Q ss_pred CCCCCcEEEecCCC
Q 021311 194 NLPEPALGFNCVGG 207 (314)
Q Consensus 194 ~~g~~d~v~d~~g~ 207 (314)
..+++|+++.++|.
T Consensus 83 ~~~~~d~li~~ag~ 96 (258)
T PRK06949 83 EAGTIDILVNNSGV 96 (258)
T ss_pred hcCCCCEEEECCCC
Confidence 33469999999984
No 218
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.017 Score=47.80 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=62.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEEecC--h-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVFTES--Q-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~-~~~~~~--~-~~~~~-i~~~~~~~g~ 197 (314)
++++++|+|++|.+|..+++.+...|++++.+.+..... .+..+.+...+.. ..+..+ + ...++ +.+.....++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999988776532100 1112223333432 222222 2 12222 2222222235
Q ss_pred CcEEEecCCCcc--------------------------HHHHHHhcccCCEEEEEcCC
Q 021311 198 PALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 198 ~d~v~d~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~ 229 (314)
+|+++.++|... ...+++.++.+|+++.+++.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 999999998421 12233455567899998754
No 219
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0069 Score=50.70 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=52.0
Q ss_pred cCCCCCEEEEcCCCcHHHHHHHHHHHHc-CCcEEEEecCCCC-cHHHHHHHHhCCC-c-EEE--ecChh-hHHH-HHHHh
Q 021311 121 TLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAG-SDEAKEKLKGLGA-D-EVF--TESQL-EVKN-VKGLL 192 (314)
Q Consensus 121 ~~~~~~~vlI~g~~g~~G~~a~~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~lg~-~-~~~--~~~~~-~~~~-i~~~~ 192 (314)
.+..++++||+|++|++|.++++-+... |++++++.+.... .++..+.++..+. + +.+ |..+. ..++ +.+..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567889999999999999999877666 4899888865321 1222233444442 1 223 22221 2222 33333
Q ss_pred cCCCCCcEEEecCCC
Q 021311 193 ANLPEPALGFNCVGG 207 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~ 207 (314)
. .+++|+++.++|.
T Consensus 84 ~-~g~id~li~~ag~ 97 (253)
T PRK07904 84 A-GGDVDVAIVAFGL 97 (253)
T ss_pred h-cCCCCEEEEeeec
Confidence 2 2359999988875
No 220
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.98 E-value=0.075 Score=47.24 Aligned_cols=106 Identities=18% Similarity=0.228 Sum_probs=68.5
Q ss_pred HHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHH
Q 021311 112 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 191 (314)
Q Consensus 112 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~ 191 (314)
|..-..+...--.++++||+|+ |-+|..++..+...|...+.++.. ..+...+.++++|+..+ . .+++...
T Consensus 165 Av~lA~~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNR--T~erA~~La~~~~~~~~-~-----l~el~~~ 235 (414)
T COG0373 165 AVELAKRIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANR--TLERAEELAKKLGAEAV-A-----LEELLEA 235 (414)
T ss_pred HHHHHHHHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcC--CHHHHHHHHHHhCCeee-c-----HHHHHHh
Confidence 3333333333346799999999 999999999999999877777754 24444566788984432 1 2234444
Q ss_pred hcCCCCCcEEEecCCCccH----HHHHHhcccCCE--EEEEcCC
Q 021311 192 LANLPEPALGFNCVGGNSA----SKVLKFLSQGGT--MVTYGGM 229 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~~----~~~~~~l~~~G~--~v~~g~~ 229 (314)
... +|+||.+++.+.. ....+.+++.-+ +|.++.+
T Consensus 236 l~~---~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 236 LAE---ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred hhh---CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 443 9999999998653 444455555433 5666643
No 221
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0042 Score=53.80 Aligned_cols=84 Identities=25% Similarity=0.213 Sum_probs=50.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCc-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.+++++|+|+++++|.+++..+...|++++.+.+.....++..+.+.+. +.. ..+ |-.+. .+++ +.+.....+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999888889999998886421111222222221 111 122 32221 2222 222222334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 59999999984
No 222
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.019 Score=46.96 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=48.7
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEecChhhHHHHHHHhcCCCCCcEEEec
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 204 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~ 204 (314)
+++||+|++|.+|..++..+... .+++++.+. .+..+.+. .+.....+..+-.+.+.+.+.....+++|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRP----AERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCC----HHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 68999999999999998777666 888888753 33333332 2222233333322334455544443359999999
Q ss_pred CCC
Q 021311 205 VGG 207 (314)
Q Consensus 205 ~g~ 207 (314)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 985
No 223
>PRK06484 short chain dehydrogenase; Validated
Probab=96.98 E-value=0.015 Score=54.27 Aligned_cols=80 Identities=19% Similarity=0.229 Sum_probs=52.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE---EEecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE---VFTESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~---~~~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|+++++|.++++.+...|++++.+.+ +.++. +..++++... ..|..+. ..++ +.+.....++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR----NVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGR 79 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999988875 33433 3334455432 2233222 2222 2222222346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|++++++|.
T Consensus 80 iD~li~nag~ 89 (520)
T PRK06484 80 IDVLVNNAGV 89 (520)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 224
>PRK06194 hypothetical protein; Provisional
Probab=96.98 E-value=0.0061 Score=51.95 Aligned_cols=83 Identities=23% Similarity=0.257 Sum_probs=48.7
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecC--hh-hHHH-HHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--QL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~--~~-~~~~-i~~~~~~~g~~d 199 (314)
++++||+|++|.+|..+++.+...|++++++.+.....++..+.+...+... .+..+ +. .+++ +.......+++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999998888889998877753111111112222223322 22222 21 2222 222222234599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++.++|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999985
No 225
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.97 E-value=0.021 Score=43.93 Aligned_cols=112 Identities=9% Similarity=0.059 Sum_probs=63.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|++|+|.|+ |.+|..-++.+...|+++.++. ++ ..+ .+..++... .+.+......+ . ++|+|+-
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs-p~-~~~----~l~~l~~i~-~~~~~~~~~dl------~-~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS-PE-ICK----EMKELPYIT-WKQKTFSNDDI------K-DAHLIYA 76 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc-Cc-cCH----HHHhccCcE-EEecccChhcC------C-CceEEEE
Confidence 5789999999 9999988888888899888764 21 122 223343211 22221111111 1 4999999
Q ss_pred cCCCccHHHHHHhcccCCEEEEEcCCCCCCcccccccceec-ceEEEEE
Q 021311 204 CVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGF 251 (314)
Q Consensus 204 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (314)
+++.+..+..+......+.++........ .++..+..+.+ ++++.-+
T Consensus 77 aT~d~e~N~~i~~~a~~~~~vn~~d~~~~-~~f~~pa~v~~~~l~iais 124 (157)
T PRK06719 77 ATNQHAVNMMVKQAAHDFQWVNVVSDGTE-SSFHTPGVIRNDEYVVTIS 124 (157)
T ss_pred CCCCHHHHHHHHHHHHHCCcEEECCCCCc-CcEEeeeEEEECCeEEEEE
Confidence 99988886655544443445554422222 23334444443 4554433
No 226
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0047 Score=51.63 Aligned_cols=84 Identities=15% Similarity=0.164 Sum_probs=49.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-E--EecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-V--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|.++++.+...|++++.+.+.....++..+.++..+... . .|-.+. ..++ +.+.....+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999998999999888753211111112222333222 2 222221 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999884
No 227
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.02 Score=47.70 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
.++++||+|+++++|.++++.+...|++++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 468999999999999999999999999988764
No 228
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0061 Score=51.58 Aligned_cols=79 Identities=13% Similarity=0.040 Sum_probs=50.1
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecChh-hHHH-HHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
++++||+|++|++|..+++.+...|++++++.+ ++++.+.+ +.++....+ |..+. ..++ +.+.....+++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDL----DEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999888888999888774 34443332 334422222 33322 2222 222222223599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++++++|.
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999984
No 229
>PRK07985 oxidoreductase; Provisional
Probab=96.94 E-value=0.018 Score=49.33 Aligned_cols=105 Identities=12% Similarity=0.151 Sum_probs=62.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.++++||+|+++++|.++++.+...|++++++.+.. ..+.. +.++..+... .+ |-.+. ...+ +.+....
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV--EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc--chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999999999999998888999998765321 11222 2223334322 22 22221 2222 2333333
Q ss_pred CCCCcEEEecCCCcc---------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 195 LPEPALGFNCVGGNS---------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 195 ~g~~d~v~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.|++|+++.++|... ...+++.|+.+|++|.+++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 346999999987410 023444556779999987543
No 230
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0063 Score=51.64 Aligned_cols=80 Identities=20% Similarity=0.142 Sum_probs=49.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecCh-hhHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~ 194 (314)
.++++||+|++|++|.+++..+...|++++.+.+. .++.+ .++..+... .+ |-.+ ..+.+ +.+....
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~----~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVD----KPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999888899998877643 33322 223334332 22 2222 12222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.|++|++++++|.
T Consensus 81 ~g~id~li~nAg~ 93 (275)
T PRK05876 81 LGHVDVVFSNAGI 93 (275)
T ss_pred cCCCCEEEECCCc
Confidence 3469999999984
No 231
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0065 Score=50.74 Aligned_cols=84 Identities=23% Similarity=0.308 Sum_probs=50.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|++|.+|..+++.+...|++++++.+.....++..+.++..+... .+ |..+. ..+. +.+.....+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888889999888854211111222333444332 22 22221 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999984
No 232
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.91 E-value=0.0072 Score=51.62 Aligned_cols=143 Identities=13% Similarity=0.175 Sum_probs=77.6
Q ss_pred CCCCCEEeeCCCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHH--HHHHHHHhhcCCCCCEEEEcCCCcHHHHH
Q 021311 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQC 140 (314)
Q Consensus 63 ~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~~~~vlI~g~~g~~G~~ 140 (314)
+.+|++....+ .|.++-..+....+.+.+++.+-.+. -..| +...+.+ ...++++||-.|+ |. |..
T Consensus 106 ~~~g~~~~i~p----~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~l 173 (288)
T TIGR00406 106 VQFGKRFWICP----SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GIL 173 (288)
T ss_pred EEEcCeEEEEC----CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence 55688666664 34333222344566666665443321 1222 2223322 2467899999998 54 777
Q ss_pred HHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCcE-EEecChhhHHHHHHHhcCCCCCcEEEecCCCcc----HH
Q 021311 141 IIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADE-VFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----AS 211 (314)
Q Consensus 141 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~----~~ 211 (314)
++.+++ .|+..+..++. ++...+.+++ .+... +...... ...... ++||+|+.+..... +.
T Consensus 174 ai~aa~-~g~~~V~avDi---d~~al~~a~~n~~~n~~~~~~~~~~~~----~~~~~~--~~fDlVvan~~~~~l~~ll~ 243 (288)
T TIGR00406 174 SIAALK-LGAAKVVGIDI---DPLAVESARKNAELNQVSDRLQVKLIY----LEQPIE--GKADVIVANILAEVIKELYP 243 (288)
T ss_pred HHHHHH-cCCCeEEEEEC---CHHHHHHHHHHHHHcCCCcceEEEecc----cccccC--CCceEEEEecCHHHHHHHHH
Confidence 766665 57755555554 5555555532 22111 1111110 111111 25999997665432 36
Q ss_pred HHHHhcccCCEEEEEc
Q 021311 212 KVLKFLSQGGTMVTYG 227 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g 227 (314)
.+.+.|+++|.++..|
T Consensus 244 ~~~~~LkpgG~li~sg 259 (288)
T TIGR00406 244 QFSRLVKPGGWLILSG 259 (288)
T ss_pred HHHHHcCCCcEEEEEe
Confidence 6779999999999876
No 233
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.90 E-value=0.021 Score=48.14 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=55.5
Q ss_pred hcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEEe--------cChh-hHHH-H
Q 021311 120 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFT--------ESQL-EVKN-V 188 (314)
Q Consensus 120 ~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~~~~--------~~~~-~~~~-i 188 (314)
-+.+|..+++|+|++.++|++.+..++..|+.|.++.+ +.+++..+. .++....+. ..+. .++. +
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar----~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~ 103 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITAR----SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI 103 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCceEEEec----cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence 34566689999999999999999999999999999996 566665553 343222111 1111 1222 2
Q ss_pred HHHhcCCCCCcEEEecCCC
Q 021311 189 KGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~ 207 (314)
+++-.-.+.+|.+|.|+|.
T Consensus 104 ~~l~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 104 EELRDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhhhhccCCcceEEEecCc
Confidence 2222222359999999996
No 234
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.90 E-value=0.0071 Score=51.04 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=52.9
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc------EEEecC-hhhHHHHHH-
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD------EVFTES-QLEVKNVKG- 190 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~~------~~~~~~-~~~~~~i~~- 190 (314)
-.++.+||+|+++++|.+.+..+...|++++++.+. +++.+.. ...+.. ...|-. ++..+++.+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRS----EERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 367899999999999999999999999999999964 3333222 233332 122332 222333222
Q ss_pred HhcC-CCCCcEEEecCCC
Q 021311 191 LLAN-LPEPALGFNCVGG 207 (314)
Q Consensus 191 ~~~~-~g~~d~v~d~~g~ 207 (314)
.... .|++|++++++|.
T Consensus 82 ~~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHHhCCCCCEEEEcCCc
Confidence 2233 3579999999985
No 235
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.90 E-value=0.0086 Score=50.01 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=52.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|.++++.+...|++++.+.+.. .++..+.++..+... .+ |-.+ ...++ +.+.....|++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE--APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch--HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999989999998776421 222233444555432 22 2222 22222 22222233469
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999984
No 236
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.89 E-value=0.0051 Score=51.71 Aligned_cols=80 Identities=16% Similarity=0.185 Sum_probs=51.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|+++++|..+++.+...|++++.+.+ ++++.+.+ ..++.. ..+ |-.+. ..+. +.+.....++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLER----SAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999998899999988875 33443333 334332 222 22221 2222 3333333346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|++++++|.
T Consensus 81 id~li~~ag~ 90 (263)
T PRK06200 81 LDCFVGNAGI 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 237
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0066 Score=51.13 Aligned_cols=84 Identities=18% Similarity=0.170 Sum_probs=50.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EE--EecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EV--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
+++++||+|++|.+|...++.+...|++++.+.+......+..+.+...+.. .. .|..+. .+++ +.+.....+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999988875311001111122233322 22 233222 2222 23333333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 88 D~vi~~ag~ 96 (264)
T PRK07576 88 DVLVSGAAG 96 (264)
T ss_pred CEEEECCCC
Confidence 999998863
No 238
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.88 E-value=0.027 Score=47.60 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=70.5
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH--hCCCcEEEecC-hhhH----HHHHHHhcC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK--GLGADEVFTES-QLEV----KNVKGLLAN 194 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~--~lg~~~~~~~~-~~~~----~~i~~~~~~ 194 (314)
.-+++.|+|+|+.+++|..++.-+...|.+|++.+-.+.+.++-+...+ ++.. ..+|-. ++.+ +.+++.++.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t-~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRT-LQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCccee-EeeccCCHHHHHHHHHHHHHhccc
Confidence 4567889999999999999999999999999999955433333333332 1211 123332 2233 346666777
Q ss_pred CCCCcEEEecCCCc---------------------------cHHHHHHhc-ccCCEEEEEcCCCC
Q 021311 195 LPEPALGFNCVGGN---------------------------SASKVLKFL-SQGGTMVTYGGMSK 231 (314)
Q Consensus 195 ~g~~d~v~d~~g~~---------------------------~~~~~~~~l-~~~G~~v~~g~~~~ 231 (314)
.| .--++|++|-. .+...+..+ +..||+|.+++..+
T Consensus 105 ~g-LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 105 DG-LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred cc-ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 76 88899999831 012333444 35799999997665
No 239
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0054 Score=51.20 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=48.8
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEecC--h-hhHHH-HHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES--Q-LEVKN-VKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~~~~--~-~~~~~-i~~~~~~~g~~d 199 (314)
|+++||+|+++++|.+.++.+...|++++++.+.....++..+.++..+.. ..+..+ + ...++ +.+.....+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 578999999999999999999999999888775321111111222223322 233222 2 22222 222222223599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++++++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999974
No 240
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.87 E-value=0.011 Score=52.11 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
.|++|||+|++|.+|..+++.+...|.+|+++.+...........+ ..+... .+..+-.+.+.+.+.....+ +|+||
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~vi 80 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL-NLAKKIEDHFGDIRDAAKLRKAIAEFK-PEIVF 80 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH-hhcCCceEEEccCCCHHHHHHHHhhcC-CCEEE
Confidence 4689999999999999999999999999988875432221111111 112111 12222222344555444433 89999
Q ss_pred ecCCC
Q 021311 203 NCVGG 207 (314)
Q Consensus 203 d~~g~ 207 (314)
.+++.
T Consensus 81 h~A~~ 85 (349)
T TIGR02622 81 HLAAQ 85 (349)
T ss_pred ECCcc
Confidence 99984
No 241
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.86 E-value=0.012 Score=46.32 Aligned_cols=120 Identities=16% Similarity=0.203 Sum_probs=76.6
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
-.|++|.|+|. |.+|...++.++.+|++++...+. ..........+.. +. . +.++.. ..|+|+
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~----~~~~~~~~~~~~~----~~--~---l~ell~---~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRS----PKPEEGADEFGVE----YV--S---LDELLA---QADIVS 96 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESS----CHHHHHHHHTTEE----ES--S---HHHHHH---H-SEEE
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEeccc----CChhhhcccccce----ee--e---hhhhcc---hhhhhh
Confidence 36899999999 999999999999999999988853 3322223444431 11 1 222222 289999
Q ss_pred ecCCCc-----cH-HHHHHhcccCCEEEEEcCCCCCCcccccccceecceEEEEEechhhccccCHHHHHHHHHHHHHHH
Q 021311 203 NCVGGN-----SA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFKDLSLKGFWLQKWLSSEKATECRNMIDYLLCLA 276 (314)
Q Consensus 203 d~~g~~-----~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (314)
.+.... .+ ...+..|+++..+|.++ ...+ -+-+.+++.+
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~a---RG~~--------------------------------vde~aL~~aL 141 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVA---RGEL--------------------------------VDEDALLDAL 141 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESS---SGGG--------------------------------B-HHHHHHHH
T ss_pred hhhccccccceeeeeeeeeccccceEEEecc---chhh--------------------------------hhhhHHHHHH
Confidence 888742 12 78899999999998876 2211 0135677888
Q ss_pred HcCCcc-ccceeeccccHH
Q 021311 277 REGKLK-YDMELVPFNNFQ 294 (314)
Q Consensus 277 ~~g~~~-~~~~~~~~~~~~ 294 (314)
++|++. .-.+++.-|..+
T Consensus 142 ~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 142 ESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp HTTSEEEEEESS-SSSSSS
T ss_pred hhccCceEEEECCCCCCCC
Confidence 888888 345665555444
No 242
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0075 Score=49.61 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=50.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHHH-HHHhcCCC-C
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKNV-KGLLANLP-E 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~i-~~~~~~~g-~ 197 (314)
.+++++|+|+++++|.+.+..+...|++++.+.+.....++..+.++..+... .+ |-.+ ...+++ .+.....| +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888899998887753211111122333444332 22 2222 222222 22222223 5
Q ss_pred CcEEEecCC
Q 021311 198 PALGFNCVG 206 (314)
Q Consensus 198 ~d~v~d~~g 206 (314)
+|++++++|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999997
No 243
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.86 E-value=0.021 Score=49.59 Aligned_cols=95 Identities=15% Similarity=0.186 Sum_probs=60.1
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|+|+||+|.+|..++..+...|.+++++++. .++...+...+.+.+. .+-.+.+.+.+...+ +|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~----~~~~~~l~~~~v~~v~-~Dl~d~~~l~~al~g---~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRN----LRKASFLKEWGAELVY-GDLSLPETLPPSFKG---VTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC----hHHhhhHhhcCCEEEE-CCCCCHHHHHHHHCC---CCEEEECCC
Confidence 69999999999999998888889999999863 3333333334543322 221123344444443 999999876
Q ss_pred Ccc-------------HHHHHHhcccCC--EEEEEcCC
Q 021311 207 GNS-------------ASKVLKFLSQGG--TMVTYGGM 229 (314)
Q Consensus 207 ~~~-------------~~~~~~~l~~~G--~~v~~g~~ 229 (314)
... ...+++.++..| ++|.+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 421 124455555444 88888764
No 244
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.86 E-value=0.0074 Score=53.65 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=69.9
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHH
Q 021311 109 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV 188 (314)
Q Consensus 109 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i 188 (314)
....+..+.+..+++++++||-+|+ +.|..+..+++..|++++++.- +++..+.+++.....-++....+ .
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDl----S~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTI----SAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhccCeEEEEECc---h
Confidence 4556666767788999999999998 3577788888888998887763 67777777653321111111111 1
Q ss_pred HHHhcCCCCCcEEEec-----CCCc----cHHHHHHhcccCCEEEEEc
Q 021311 189 KGLLANLPEPALGFNC-----VGGN----SASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~-----~g~~----~~~~~~~~l~~~G~~v~~g 227 (314)
..+ . +.+|.|+.. ++.. .+..+.+.|+|+|.+++..
T Consensus 223 ~~l-~--~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RDL-N--GQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhc-C--CCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 222 1 259998754 2332 2367788999999998754
No 245
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.86 E-value=0.0084 Score=49.48 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=50.6
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecCh-hhHHH-HHHHhcCCCCCcEE
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPALG 201 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~-~~~~~-i~~~~~~~g~~d~v 201 (314)
++++||+|+++++|..+++.+...|++++++.+.. ++..+.++..+...+ .|..+ ...+. +.+.....+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 46899999999999999998888999999887642 222334444553221 22222 12222 22222223359999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
+.++|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999984
No 246
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.86 E-value=0.0084 Score=50.15 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|..+++.+...|++++.+.+.....++..+.++..|... .+ |..+. ..+. +.+.....+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999888889998877653111111122233333322 22 32221 2222 22222233459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999985
No 247
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.021 Score=48.33 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
++++||+|++|.+|..+++.+...|.+++.+.+. .+..+.+ ..++.. ..+ |..+. ..+. +.......+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARD----TATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999998888889998888753 3333333 223322 222 22221 2222 22222223359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|.++.|+|.
T Consensus 79 d~vi~~ag~ 87 (275)
T PRK08263 79 DIVVNNAGY 87 (275)
T ss_pred CEEEECCCC
Confidence 999999985
No 248
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.84 E-value=0.044 Score=40.37 Aligned_cols=96 Identities=15% Similarity=0.214 Sum_probs=62.5
Q ss_pred EEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHh-------------
Q 021311 128 IVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL------------- 192 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~------------- 192 (314)
|.|.|++|++|..++.+.+... +++++.+..+ ..+.-.+.++++.+.++.-.++...+.+++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~-n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS-NIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS-THHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 5789999999999999999887 6888777543 24555677788999888877765443433322
Q ss_pred -------cCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEE
Q 021311 193 -------ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVT 225 (314)
Q Consensus 193 -------~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~ 225 (314)
... .+|+++....+- -..-.+..++.+=++.+
T Consensus 80 ~~l~~~~~~~-~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEP-EVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHTHT-T-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhcCC-CCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 222 378888776653 34666666666655443
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.84 E-value=0.0084 Score=52.09 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=50.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----Hh-CCC-c---EEEecCh---hhHHHHHHH
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGA-D---EVFTESQ---LEVKNVKGL 191 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-lg~-~---~~~~~~~---~~~~~i~~~ 191 (314)
.|++++|+||++++|.+.++.+...|++++.+.+. +++.+.+ +. .+. . ...|-.+ ...+++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN----PDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 58999999999999999998888889999988853 4443322 22 111 1 1223332 223445555
Q ss_pred hcCCCCCcEEEecCCC
Q 021311 192 LANLPEPALGFNCVGG 207 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~ 207 (314)
.++.. +|++++++|.
T Consensus 128 ~~~~d-idilVnnAG~ 142 (320)
T PLN02780 128 IEGLD-VGVLINNVGV 142 (320)
T ss_pred hcCCC-ccEEEEecCc
Confidence 54432 7799999874
No 250
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0073 Score=50.53 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=49.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc-E--EEecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-E--VFTESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~~-~--~~~~~~~-~~~~-i~~~~~~ 194 (314)
.+++++|+|++|.+|..++..+...|++++++.+. +++.+.+ ...+.. . ..|..+. ..+. +.+....
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999888999999888753 3222222 222332 1 2222221 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|+++.++|.
T Consensus 80 ~g~~d~vi~~ag~ 92 (258)
T PRK07890 80 FGRVDALVNNAFR 92 (258)
T ss_pred cCCccEEEECCcc
Confidence 3459999999974
No 251
>PRK06720 hypothetical protein; Provisional
Probab=96.83 E-value=0.013 Score=45.73 Aligned_cols=84 Identities=14% Similarity=0.207 Sum_probs=49.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChh---hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQL---EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~---~~~~-i~~~~~~~g~~ 198 (314)
.++.++|+|+++++|...+..+...|++++++.+.....++..+.+...+... .+..+-. ..++ +.+.....|++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999998888889998777643111111112223334332 2222211 1222 22223333469
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999999884
No 252
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.83 E-value=0.0064 Score=51.11 Aligned_cols=79 Identities=18% Similarity=0.213 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EEE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.+++++|+|++|++|..+++.+...|++++++.+ +.++.+.+.. .+.. ..+ |..+. ..++ +.+.....++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK----SAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999988889999988774 3444444433 2322 122 22221 1222 3333333345
Q ss_pred CcEEEecCC
Q 021311 198 PALGFNCVG 206 (314)
Q Consensus 198 ~d~v~d~~g 206 (314)
+|++++++|
T Consensus 80 id~li~~Ag 88 (262)
T TIGR03325 80 IDCLIPNAG 88 (262)
T ss_pred CCEEEECCC
Confidence 999999987
No 253
>PRK08264 short chain dehydrogenase; Validated
Probab=96.82 E-value=0.01 Score=48.96 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHHHhCCCc-EEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
.+++++|+|++|.+|..+++.+...|+ +++.+.+. .++.+. .+.. ..+..+-.+.+.+.+.....+.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC----hhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 468999999999999999999999999 87777753 332222 2222 22222222223333333333359999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
+.++|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999986
No 254
>PRK08589 short chain dehydrogenase; Validated
Probab=96.82 E-value=0.0095 Score=50.43 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EE--EecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EV--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|.+.++.+...|++++++.+. ...++..+.+++.+.. .. .|-.+. .++. +.+.....|++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999998888889999988753 1111222233333322 22 232222 2222 22222233459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999974
No 255
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0054 Score=52.89 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.+++++|+|++|++|..+++.+...|++++++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999998888889999888753
No 256
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0083 Score=50.24 Aligned_cols=83 Identities=18% Similarity=0.193 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|...++.+...|++++++.+..... +..+.++..+.. ..+ |..+. ..+. +.+.....+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999988888999998887643211 112222333433 222 22221 1222 22222333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 257
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0062 Score=50.71 Aligned_cols=80 Identities=21% Similarity=0.182 Sum_probs=48.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHh--CCCc-EEEecC--hh-hHHH-HHHHhcCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKG--LGAD-EVFTES--QL-EVKN-VKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~--lg~~-~~~~~~--~~-~~~~-i~~~~~~~ 195 (314)
.+++++|+|++|.+|..+++.+...|++++.+.+. .+... .... .+.. ..+..+ +. .+++ +.+.....
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD----AEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999998888889998888753 22222 2222 2322 222222 21 2222 22222222
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|+++.|+|.
T Consensus 80 ~~id~vi~~ag~ 91 (252)
T PRK06138 80 GRLDVLVNNAGF 91 (252)
T ss_pred CCCCEEEECCCC
Confidence 359999999985
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0077 Score=50.13 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=30.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|..+++.+...|++++++.+.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999998888889999888753
No 259
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.008 Score=50.55 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=49.5
Q ss_pred CCCEEEEcCC--CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecCh-hhHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~--~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~-~~~~~-i~~~~~~~g 196 (314)
.++++||+|+ ++++|.+.++.+...|++++.+.+.. ..++..+.+ +..+....+ |-.+ +..++ +.+.....|
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4689999996 57999999988888999998765321 122233333 233433333 2222 12222 222233334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++|+|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 69999999974
No 260
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.80 E-value=0.061 Score=41.23 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=64.6
Q ss_pred HHHHHHHHhhc-CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHH
Q 021311 111 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK 189 (314)
Q Consensus 111 ta~~~l~~~~~-~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~ 189 (314)
..+.++.+..+ .-.|++++|.|- |-+|.-.++.++.+|++|+++.. ++.+.-.+..-|... . .+.
T Consensus 8 S~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~----DPi~alqA~~dGf~v-~--------~~~ 73 (162)
T PF00670_consen 8 SLVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEI----DPIRALQAAMDGFEV-M--------TLE 73 (162)
T ss_dssp HHHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-S----SHHHHHHHHHTT-EE-E---------HH
T ss_pred hHHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEEC----ChHHHHHhhhcCcEe-c--------CHH
Confidence 34555555444 468999999999 99999999999999999987773 555555555455432 1 122
Q ss_pred HHhcCCCCCcEEEecCCCccH--HHHHHhcccCCEEEEEcC
Q 021311 190 GLLANLPEPALGFNCVGGNSA--SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~~~--~~~~~~l~~~G~~v~~g~ 228 (314)
+... ..|+++.++|.... .+-++.|+++.-+..+|.
T Consensus 74 ~a~~---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 74 EALR---DADIFVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp HHTT---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred HHHh---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 2222 38999999998653 788899999988888773
No 261
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.80 E-value=0.013 Score=49.09 Aligned_cols=83 Identities=17% Similarity=0.202 Sum_probs=51.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++.+|.+.++.+...|++++++.+. ...++..+.....+.. ..+ |-.+. ..+. +.+.....|++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999998999999888754 1112222333344433 222 22221 2222 22232333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999984
No 262
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.013 Score=50.07 Aligned_cols=85 Identities=12% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC---------CCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-H
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR---------AGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-V 188 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~---------~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i 188 (314)
-.++++||+|+++++|.+.++.+...|++++++.+.. ...++..+.++..+... .+ |-.+ ..+++ +
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3578999999999999999988888999988876431 00111122223334332 22 2222 12222 2
Q ss_pred HHHhcCCCCCcEEEecCCC
Q 021311 189 KGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~ 207 (314)
.+.....|++|++++|+|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2333333469999999985
No 263
>PRK06398 aldose dehydrogenase; Validated
Probab=96.79 E-value=0.019 Score=48.20 Aligned_cols=74 Identities=14% Similarity=0.202 Sum_probs=47.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE--ecChh-hHHH-HHHHhcCCCCCc
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
.++++||+|+++++|.+++..+...|++++++.+.. .+.. ....+ |-.+. .+++ +.+.....+++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~----~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id 74 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE----PSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRID 74 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----cccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999998887532 1110 11122 32222 2222 222223334599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++++++|.
T Consensus 75 ~li~~Ag~ 82 (258)
T PRK06398 75 ILVNNAGI 82 (258)
T ss_pred EEEECCCC
Confidence 99999884
No 264
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.79 E-value=0.017 Score=47.65 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=55.8
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|+|+|++|.+|...++.+...+.++.++++.. +......++..|+..+ ..+-.+.+.+.+...+ +|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g---~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAEVV-EADYDDPESLVAALKG---VDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTT---CSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccceEe-ecccCCHHHHHHHHcC---CceEEeecCc
Confidence 78999999999999999999999999999763 3445566777888644 4443345566666654 9999999984
No 265
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.79 E-value=0.014 Score=51.33 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=64.0
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHHHhCC--CcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG--ADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
.+|||+|+ |.+|+.+++.+.+.+ .++.++.+ +.++.+.+.... .-..+..+-.+.+.+.++..+ +|+||
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR----s~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~---~d~VI 73 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR----SKEKCARIAELIGGKVEALQVDAADVDALVALIKD---FDLVI 73 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeC----CHHHHHHHHhhccccceeEEecccChHHHHHHHhc---CCEEE
Confidence 57999999 999999999988888 56665553 556666664432 122222333334566666665 79999
Q ss_pred ecCCCccHHHHH-HhcccCCEEEEEc
Q 021311 203 NCVGGNSASKVL-KFLSQGGTMVTYG 227 (314)
Q Consensus 203 d~~g~~~~~~~~-~~l~~~G~~v~~g 227 (314)
+|........++ .|++.+=.++...
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTS 99 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEcc
Confidence 999987665555 5666676777665
No 266
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.78 E-value=0.011 Score=46.21 Aligned_cols=102 Identities=20% Similarity=0.172 Sum_probs=67.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEec------------------ChhhHH
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE------------------SQLEVK 186 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~------------------~~~~~~ 186 (314)
..+|+|+|+ |.+|+.|+.+++.+|+++++.-. ...+.+....++...+... ......
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDE----RPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYES 94 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEES----SHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccC----CHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHH
Confidence 378999998 99999999999999999988874 6667777777777554331 111112
Q ss_pred HHHHHhcCCCCCcEEEecCCC-----cc--HHHHHHhcccCCEEEEEcCCCCCCc
Q 021311 187 NVKGLLANLPEPALGFNCVGG-----NS--ASKVLKFLSQGGTMVTYGGMSKKPI 234 (314)
Q Consensus 187 ~i~~~~~~~g~~d~v~d~~g~-----~~--~~~~~~~l~~~G~~v~~g~~~~~~~ 234 (314)
.+.+.... +|+++.+.-. +. ....++.|+++..++.+..-.+..+
T Consensus 95 ~f~~~i~~---~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG~i 146 (168)
T PF01262_consen 95 NFAEFIAP---ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGGSI 146 (168)
T ss_dssp HHHHHHHH----SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-SB
T ss_pred HHHHHHhh---CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCCCc
Confidence 34444433 8998864321 22 2788899999999999986555433
No 267
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0079 Score=49.29 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=49.0
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE--ecChh-hHHHHHHHhcCCCCCcEEE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQL-EVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~--~~~~~-~~~~i~~~~~~~g~~d~v~ 202 (314)
++++|+|++|.+|...++.+...|++++++.+.. ++.+.+++++....+ |-.+. ..+++.+...+. ++|+++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGP----QQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ-RFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC----cchHHHHhccccceEEcCCCCHHHHHHHHHHhhcC-CCCEEE
Confidence 5799999999999999988888899998888642 223333333322222 22222 233333333332 499999
Q ss_pred ecCCC
Q 021311 203 NCVGG 207 (314)
Q Consensus 203 d~~g~ 207 (314)
.++|.
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 99864
No 268
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.77 E-value=0.085 Score=44.40 Aligned_cols=154 Identities=14% Similarity=0.088 Sum_probs=94.6
Q ss_pred cCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh------------hhHHHH
Q 021311 121 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ------------LEVKNV 188 (314)
Q Consensus 121 ~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~------------~~~~~i 188 (314)
.--+...+++.|. |..|++++..++..|+-|...- -...+.+..+++|+...-..++ ++..+-
T Consensus 160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rd----lrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q 234 (356)
T COG3288 160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARD----LRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQ 234 (356)
T ss_pred ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhh----hhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHH
Confidence 3356688899999 9999999999999998665433 2556666777777754322111 121111
Q ss_pred HHH-hcCCCCCcEEEecCCCc-----c--HHHHHHhcccCCEEEEEcCCCCCCccc--ccccceecceEEEEEec-hhhc
Q 021311 189 KGL-LANLPEPALGFNCVGGN-----S--ASKVLKFLSQGGTMVTYGGMSKKPITV--STSAFIFKDLSLKGFWL-QKWL 257 (314)
Q Consensus 189 ~~~-~~~~g~~d~v~d~~g~~-----~--~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~ 257 (314)
.++ ...-.++|+|+-++--+ . .......|+||+.+|.+....+.+... +..-...+++++.|... ...+
T Consensus 235 ~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~ 314 (356)
T COG3288 235 AELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRL 314 (356)
T ss_pred HHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhh
Confidence 111 11112499999987432 1 278889999999999998777666544 33446668899998642 2222
Q ss_pred cccCHHHHHHHHHHHHHHHHcC
Q 021311 258 SSEKATECRNMIDYLLCLAREG 279 (314)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~g 279 (314)
.......|.+.+-.+++++-+.
T Consensus 315 a~~aS~LYa~Nl~~~l~ll~~~ 336 (356)
T COG3288 315 AAQASQLYATNLVNLLKLLCKK 336 (356)
T ss_pred hhhHHHHHHHHHHHHHHHHhcc
Confidence 2122333444455555555443
No 269
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0095 Score=49.96 Aligned_cols=84 Identities=18% Similarity=0.131 Sum_probs=49.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh--CCCc-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG--LGAD-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~--lg~~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.+++++|+|+++++|.++++.+...|++++.+.+.....++..+.+.. .+.. ..+ |..+. ..+. +.+.....+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999889999998887532111111122222 2222 122 22221 2222 222222234
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|+++.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 59999999984
No 270
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.01 Score=50.34 Aligned_cols=84 Identities=14% Similarity=0.087 Sum_probs=50.8
Q ss_pred CCCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecCh-hhHHH-HHHHhcCC
Q 021311 123 NSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANL 195 (314)
Q Consensus 123 ~~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~-~~~~~-i~~~~~~~ 195 (314)
-.++++||+|++ +++|.+.++.+...|++++.+.+.. ...++.+.+ ++++....+ |-.+ ...++ +.+.....
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 357899999996 7999999998888999988765321 112333333 345543333 2222 12233 22223333
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
|++|++++++|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 469999999873
No 271
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.76 E-value=0.015 Score=50.33 Aligned_cols=99 Identities=18% Similarity=0.241 Sum_probs=63.0
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHH----HhCCCcEEEecChhhHHHHHHH
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGL 191 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~i~~~ 191 (314)
+...++++++||..|+ | .|..++.+++..+. .++++- . +++..+.+ +..|.+.+.....+..+.+
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVD-i---s~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~--- 144 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVE-Y---SRKICEIAKRNVRRLGIENVIFVCGDGYYGV--- 144 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEE-C---CHHHHHHHHHHHHHcCCCcEEEEeCChhhcc---
Confidence 3467889999999998 5 59999999988764 355444 2 45544333 4466553322222111111
Q ss_pred hcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEE
Q 021311 192 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTY 226 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~ 226 (314)
...+.+|+|+.+.+.... ...++.|+++|+++..
T Consensus 145 -~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 145 -PEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred -cccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 111249999998876544 5778899999998874
No 272
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.025 Score=48.00 Aligned_cols=104 Identities=20% Similarity=0.178 Sum_probs=58.5
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHHHHHHhcCCCCCcE
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKNVKGLLANLPEPAL 200 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~i~~~~~~~g~~d~ 200 (314)
+++++|+|+ |++|.+++..+. .|++++.+.+.....++..+.++..+... .+ |-.+. ..+.+.+.....+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899998 799999998775 79999888753211111122223334322 22 32222 22332222222346999
Q ss_pred EEecCCCcc-------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 201 GFNCVGGNS-------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 201 v~d~~g~~~-------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+++++|... +..+++.|+.+|+++.+++..
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999998521 123344556678777776543
No 273
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0085 Score=49.99 Aligned_cols=84 Identities=15% Similarity=0.279 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|.+.++.+...|++++.+.+.....+...+.+...+.. ..+ |..+. ..+. +.+.....+++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999989999988875321111112222233332 222 22221 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999973
No 274
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.74 E-value=0.016 Score=48.18 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=51.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|..++..+...|++++.+.+.. ..+..+.+..++... .+ |..+. .... +.+.....+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999988888999988887531 122233444455332 22 22221 2222 22222233359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999975
No 275
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.73 E-value=0.0098 Score=49.84 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=49.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCc-EEE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.++++||+|++|.+|..+++.+...|++++.+.+. .++.+. +...+.. ..+ |..+. .+++ +.+....
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK----AEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999998888899998888753 333222 2233332 122 22221 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|.++.++|.
T Consensus 87 ~~~id~vi~~ag~ 99 (259)
T PRK08213 87 FGHVDILVNNAGA 99 (259)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999884
No 276
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.73 E-value=0.014 Score=48.27 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=50.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEE---ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~---~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
+++++||+|++|.+|...++.+...|.+++.+.+.....+.....++..+....+ |..+. ..++ +.+.....+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999888888999877775422111112233334443322 22222 1222 22222222358
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999975
No 277
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.72 E-value=0.0096 Score=50.51 Aligned_cols=83 Identities=13% Similarity=0.246 Sum_probs=49.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|++|.+|.+.++.+...|++++++.+.....++..+.++..+... .+ |..+. ..+. +.+.....+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999988899998887753111111122223333321 22 22221 2222 22222223459
Q ss_pred cEEEecCC
Q 021311 199 ALGFNCVG 206 (314)
Q Consensus 199 d~v~d~~g 206 (314)
|+++.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999988
No 278
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.72 E-value=0.0093 Score=49.58 Aligned_cols=84 Identities=14% Similarity=0.117 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|...+..+...|++++++.+.........+.+...+.. .++ |-.+. .+++ +.+.....+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999888888999988886421112222223333332 222 22221 1222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.+++.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999865
No 279
>PRK08643 acetoin reductase; Validated
Probab=96.71 E-value=0.013 Score=49.04 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=49.2
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
++++||+|++|.+|..+++.+...|++++++.+..+..++....+...+... .+ |..+. ...+ +.+.....+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999998899999888753211111122223333322 22 22221 2222 222222223599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+++.|+|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999974
No 280
>PRK05717 oxidoreductase; Validated
Probab=96.69 E-value=0.017 Score=48.33 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=50.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-E--EecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-V--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.|++++|+|++|.+|..++..+...|++++++.+. .+...+..+.++... . .|-.+. ..++ +.+.....|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD---RERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC---HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888889998887642 122222333444322 2 222221 2222 23333333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999999984
No 281
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.016 Score=48.07 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE-EE--ecCh-hhHHHHH-HHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF--TESQ-LEVKNVK-GLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~-~~--~~~~-~~~~~i~-~~~~~~g~ 197 (314)
++++++|+|++|.+|...++.+...|++++.+.+ +++.. +..++++... .+ |..+ .....+. ......++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR----DPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999887774 33333 2334455432 22 2222 1222222 22222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 81 id~vi~~ag~ 90 (249)
T PRK06500 81 LDAVFINAGV 90 (249)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 282
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.69 E-value=0.028 Score=44.71 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=65.5
Q ss_pred CCCEEEEcCC-CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCc-EEEecCh-hhH----HHHHHHhcCC
Q 021311 124 SGDSIVQNGA-TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQ-LEV----KNVKGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~-~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~-~~~~~~~-~~~----~~i~~~~~~~ 195 (314)
..+.|||+|+ .|++|++.+.-....|+.|+++.+ +.+....+. ..|.. .-+|-.+ +.+ ..++....
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR----~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~-- 79 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR----RLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPD-- 79 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc----ccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCC--
Confidence 4578899987 799999999888899999999996 444444443 55532 1233322 222 23444433
Q ss_pred CCCcEEEecCCCccH-------------------------HHH--HHhcccCCEEEEEcCCC
Q 021311 196 PEPALGFNCVGGNSA-------------------------SKV--LKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 196 g~~d~v~d~~g~~~~-------------------------~~~--~~~l~~~G~~v~~g~~~ 230 (314)
|+.|+.++++|-++. .++ -...+..|+||.+|+..
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~ 141 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLA 141 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEeccee
Confidence 379999999986421 111 12457789999999654
No 283
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.0093 Score=49.97 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=48.8
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC--c-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~--~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
++++||+|++|.+|..++..+...|++++++.+ +.++.+.+ +.+.. . ..+ |-.+. .+.+ +.+.....+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVAR----RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999888888999888775 33333322 22221 1 122 22221 2222 233333334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
.+|++++++|.
T Consensus 78 ~id~lv~~ag~ 88 (257)
T PRK07024 78 LPDVVIANAGI 88 (257)
T ss_pred CCCEEEECCCc
Confidence 59999999874
No 284
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.017 Score=49.05 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=50.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcE-EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADE-VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|.++++.+...|++++++.+ +.++.+.+.. .+... .+ |..+. ...+ +.+.....++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVR----SEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC----CHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999988888999998885 3444433333 22211 22 32222 2222 2222222335
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 79 ~d~vv~~ag~ 88 (277)
T PRK06180 79 IDVLVNNAGY 88 (277)
T ss_pred CCEEEECCCc
Confidence 9999999986
No 285
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.68 E-value=0.033 Score=47.89 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=29.0
Q ss_pred CCCEEEEcCC--CcHHHHHHHHHHHHcCCcEEE
Q 021311 124 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSIN 154 (314)
Q Consensus 124 ~~~~vlI~g~--~g~~G~~a~~la~~~g~~vi~ 154 (314)
.|+++||+|+ ++++|.++++.+...|++++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 5899999999 799999999999999999988
No 286
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.016 Score=48.38 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE--EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~--~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|..+++.+...|++++.+.+. ....+....+.... .+ |-.+. ..+. +.+.....++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999998888899998888753 22222333222111 22 22221 1222 2222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 287
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0095 Score=49.26 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=30.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.+++++|+|++|.+|...++.+...|++++++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 45899999999999999998888899998888864
No 288
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0092 Score=50.36 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=48.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChh-hHHH-HHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
.+++++|+|++|.+|..+++.+...|++++++.+. .++.+.. .+... ..|..+. ..++ +.......|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~----~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN----PARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC----hhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 35789999999999999998888889999888853 2222211 12211 2233222 2222 2223333346999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
+++|+|.
T Consensus 77 li~~ag~ 83 (270)
T PRK06179 77 LVNNAGV 83 (270)
T ss_pred EEECCCC
Confidence 9999985
No 289
>PRK08017 oxidoreductase; Provisional
Probab=96.66 E-value=0.013 Score=48.93 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=51.5
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hH----HHHHHHhcCCCCCc
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EV----KNVKGLLANLPEPA 199 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~----~~i~~~~~~~g~~d 199 (314)
++++|+|++|.+|.++++.+...|++++++.+ +.++.+.++..+...+ .|..+. .. +.+.....+ .+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~--~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR----KPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDN--RLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC--CCe
Confidence 57999999999999999999989999888774 4555666666665433 233332 11 222222222 489
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
.++.++|.
T Consensus 77 ~ii~~ag~ 84 (256)
T PRK08017 77 GLFNNAGF 84 (256)
T ss_pred EEEECCCC
Confidence 99999874
No 290
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.66 E-value=0.015 Score=48.50 Aligned_cols=84 Identities=17% Similarity=0.147 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|.++++.+...|++++.+.+.....++..+.++..+... .+ |-.+. ..+. +.+.....+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999998888899998887753111111112223233222 22 22221 2222 22222223459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.012 Score=49.43 Aligned_cols=83 Identities=12% Similarity=0.130 Sum_probs=49.3
Q ss_pred CCCEEEEcCCCc--HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g--~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
.++.++|+|+++ ++|.++++.+...|++++...+. ...++..+.+ ...|....+ |-.+. ..++ +.+.....|
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~-~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS-EVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc-hHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999976 79999998888889998876532 1112222222 233443322 33222 2233 222223334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999999873
No 292
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.65 E-value=0.0063 Score=49.15 Aligned_cols=104 Identities=22% Similarity=0.252 Sum_probs=61.1
Q ss_pred HHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEE--EecChhhHHHHHHHh
Q 021311 117 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLL 192 (314)
Q Consensus 117 ~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~~--~~~~~~~~~~i~~~~ 192 (314)
.+...++||++||-+|+ +.|+.++-+++..|. .|+.+-..+.-.+..++.+..++...+ +..+... .+.
T Consensus 65 l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-----g~~ 137 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-----GWP 137 (209)
T ss_dssp HHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-----TTG
T ss_pred HHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-----ccc
Confidence 34577999999999997 448888888888775 345444221111222333445565432 2222111 111
Q ss_pred cCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcC
Q 021311 193 ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~ 228 (314)
.. +.||.|+-+++-+.. ...++.|++||++|..-.
T Consensus 138 ~~-apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 138 EE-APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp GG--SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred cC-CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 11 259999998887766 678899999999998653
No 293
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.65 E-value=0.051 Score=43.90 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=71.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|+.|||.|+ |.+|..=+.++...|++++++...- .++-.......+ ...+. +....+.+ . .+++||-
T Consensus 11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~--~~el~~~~~~~~-i~~~~-~~~~~~~~----~---~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF--EPELKALIEEGK-IKWIE-REFDAEDL----D---DAFLVIA 78 (210)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc--cHHHHHHHHhcC-cchhh-cccChhhh----c---CceEEEE
Confidence 5789999999 9999999999999999999888541 232233333332 11111 11111111 1 3899999
Q ss_pred cCCCccH-HHHHHhcccCCEEEEEcCCCCCCccccccc-ceecceEEEEEe
Q 021311 204 CVGGNSA-SKVLKFLSQGGTMVTYGGMSKKPITVSTSA-FIFKDLSLKGFW 252 (314)
Q Consensus 204 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ 252 (314)
+++.+.. ....+..++.+.+|.....+.. .++..+. +-...+++.-+.
T Consensus 79 At~d~~ln~~i~~~a~~~~i~vNv~D~p~~-~~f~~Pa~~~r~~l~iaIsT 128 (210)
T COG1648 79 ATDDEELNERIAKAARERRILVNVVDDPEL-CDFIFPAIVDRGPLQIAIST 128 (210)
T ss_pred eCCCHHHHHHHHHHHHHhCCceeccCCccc-CceecceeeccCCeEEEEEC
Confidence 9998777 5666777888888887744332 2333333 333445554443
No 294
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.014 Score=48.30 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EE--ecCh-hhHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~ 194 (314)
.+++++|+|++|.+|..++..+...|.+++++.+. +++.+. ++..+... .+ |-.+ ..... +.+....
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARS----QDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999998899998888853 332222 22333222 22 2222 12222 2222223
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|+++.++|.
T Consensus 81 ~~~id~lv~~ag~ 93 (241)
T PRK07454 81 FGCPDVLINNAGM 93 (241)
T ss_pred cCCCCEEEECCCc
Confidence 3459999999985
No 295
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.65 E-value=0.0098 Score=50.00 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCCEEEEcCC--CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEE--ecCh-hhHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~--~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~--~~~~-~~~~~-i~~~~~~~g 196 (314)
.++++||+|+ ++++|.++++.+...|++++.+.+.. ...++.+.+ ++++....+ |-.+ +..+. +.......|
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999996 57999999988888999988764221 123333332 344433222 2222 12222 222222234
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 69999999874
No 296
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.036 Score=46.18 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
.+++++|+|++|.+|..+++.+...|+++++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 358999999999999999998888899887654
No 297
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.64 E-value=0.028 Score=46.74 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=62.2
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH---HHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
++++||+|++|.+|...++-+...|++++...+.. .+... ..+++.+.. ..+ |..+. ...+ +.+.....+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999988888999987776532 12221 222334432 222 22221 1111 222222223
Q ss_pred CCcEEEecCCCcc--------------------------HHHHHHhcccCCEEEEEcCCC
Q 021311 197 EPALGFNCVGGNS--------------------------ASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 197 ~~d~v~d~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++|++|.++|... ...+++.++..|+++.+++..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 5999999998410 123445566778999998644
No 298
>PLN02253 xanthoxin dehydrogenase
Probab=96.64 E-value=0.012 Score=50.08 Aligned_cols=81 Identities=15% Similarity=0.192 Sum_probs=48.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--c-EE--EecChh-hHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--D-EV--FTESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~-~~--~~~~~~-~~~~-i~~~~~~~g 196 (314)
.++++||+|++|.+|.++++.+...|++++.+.+. .+...+....++. . .. .|-.+. .++. +.......+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ---DDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 36899999999999999998888889998887642 1211222233321 1 12 222221 2222 222222234
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 59999999974
No 299
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.0097 Score=49.52 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=48.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec-CCCCcHHHHHHHHhCCCcE-EEecC--h-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~~~lg~~~-~~~~~--~-~~~~~-i~~~~~~~g~ 197 (314)
+++++||+|++|.+|..++..+...|++++++.. .....++..+.++..+... .+..+ + ..++. +.+.....++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999989999876432 2111111122333444432 22222 2 12222 2222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 300
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.64 E-value=0.039 Score=46.08 Aligned_cols=100 Identities=10% Similarity=0.095 Sum_probs=59.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-h-CCCcEE-EecChhhHHHHHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G-LGADEV-FTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~-lg~~~~-~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
.+.+|||+|++|.+|..+++.+...|.+++++++. .++..... . .+...+ .|..+. .+.+.+.... ++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~----~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~~~--~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD----VDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAIGD--DSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC----HHHHHHhcccCCceEEEEeeCCCC-HHHHHHHhhc--CCCE
Confidence 46899999999999999998888889999888853 33322221 1 112211 233221 1233333321 3999
Q ss_pred EEecCCCcc--------------HHHHHHhccc--CCEEEEEcCCC
Q 021311 201 GFNCVGGNS--------------ASKVLKFLSQ--GGTMVTYGGMS 230 (314)
Q Consensus 201 v~d~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~~ 230 (314)
+|.++|... ...+++.+.. .+++|.+++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 999887421 1344554443 36888887543
No 301
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.018 Score=48.53 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCc--HHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHH-hCCCcEEE--ecCh-hhHHH-HHHHhcCCC
Q 021311 124 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF--TESQ-LEVKN-VKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g--~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~lg~~~~~--~~~~-~~~~~-i~~~~~~~g 196 (314)
.++++||+|+++ ++|.++++.+...|++++.+.+. ...++..+.+. ..+....+ |-.+ ..++. +.+.....|
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 478999999975 89999998888899998766542 11122233332 23322233 2222 22333 222233334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|++++++|.
T Consensus 84 ~iD~linnAg~ 94 (262)
T PRK07984 84 KFDGFVHSIGF 94 (262)
T ss_pred CCCEEEECCcc
Confidence 69999999973
No 302
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.024 Score=47.32 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=51.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~ 197 (314)
.++++||+|+++++|.++++.+...|++++++.+..... ++..+.++..+... .+ |-.+ ..+++ +.+.....++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999988999998887542111 11122333344322 22 2222 12222 2222222346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|++++|+|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 303
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.60 E-value=0.023 Score=47.47 Aligned_cols=82 Identities=17% Similarity=0.156 Sum_probs=50.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|+++++|.++++.+...|++++.+.+.. .++..+.+..++... .+ |-.+ ...+. +.+.....+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999988999988765321 233334444444322 22 2222 12222 22222223459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++++|+|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999985
No 304
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.60 E-value=0.065 Score=44.57 Aligned_cols=77 Identities=22% Similarity=0.275 Sum_probs=48.1
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCCcE
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VF--TESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
+++|+|++|.+|.+.+..+...|++++.+.+ ++++.+.+ ..++... .+ |-.+. ..++ +.+.....+++|.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGR----RQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999889999988875 34444333 2234332 22 22221 2222 2222222235999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.++|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9999874
No 305
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.59 E-value=0.021 Score=51.14 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=49.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC-cEEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA-DEVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~-~~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
.+++++|+|++|++|.+.+..+...|++++++.+. +++.. .....+. ...+..+-.+.+.+.+..+ ++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~----~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN----SDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEE
Confidence 47899999999999999998888889999888753 33322 2211111 1122222222334544443 49999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
++++|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 999874
No 306
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.58 E-value=0.018 Score=48.09 Aligned_cols=84 Identities=15% Similarity=0.144 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|...++.+...|.+++++.+.....++....++..+... .+ |-.+. ..+. +.......+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999998888889999888864221111112223333332 22 22221 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999974
No 307
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.58 E-value=0.017 Score=47.72 Aligned_cols=84 Identities=18% Similarity=0.255 Sum_probs=49.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecC--hh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--QL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~--~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|++|.+|..++..+...|++++++.+.....++..+.+...+... .+..+ +. .+.. +++.....+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999998888889998888764211111122223333322 22222 21 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999875
No 308
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.56 E-value=0.016 Score=44.88 Aligned_cols=81 Identities=16% Similarity=0.288 Sum_probs=47.3
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcEE-EecC--h-hhHHH-HHHHhcCCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTES--Q-LEVKN-VKGLLANLP 196 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~~~-~~~~--~-~~~~~-i~~~~~~~g 196 (314)
+++||+|+++++|.+.++.+...|+.+++++..+. +.++. +.+++.+.... +..+ + ...++ +.+.....+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~-~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSE-DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC-HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 47999999999999999888777886666664320 12222 23344554322 2222 1 22222 222221223
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
.+|++|.|+|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 59999999986
No 309
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.024 Score=48.95 Aligned_cols=35 Identities=23% Similarity=0.147 Sum_probs=31.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|+++++|.++++.+...|++++++.+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999998899999887754
No 310
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.54 E-value=0.19 Score=45.24 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=51.7
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH-HHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcE
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
--.+++++|.|+ |.+|.+++..+...|+..+.++.. +.++ ...+..++...++.. +++.+... .+|+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR---t~~ra~~La~~~~~~~~~~~-----~~l~~~l~---~aDi 245 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR---TIEKAQKITSAFRNASAHYL-----SELPQLIK---KADI 245 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHhcCCeEecH-----HHHHHHhc---cCCE
Confidence 346789999999 999999999999999877766643 3333 344455652222222 23333333 3999
Q ss_pred EEecCCCccH
Q 021311 201 GFNCVGGNSA 210 (314)
Q Consensus 201 v~d~~g~~~~ 210 (314)
||+|++.+..
T Consensus 246 VI~aT~a~~~ 255 (414)
T PRK13940 246 IIAAVNVLEY 255 (414)
T ss_pred EEECcCCCCe
Confidence 9999998654
No 311
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=48.66 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=29.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
++++||+|++|.+|.+.+..+...|++++.+.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999999999998888889998887753
No 312
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.53 E-value=0.02 Score=49.82 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
.+++++|+|++|++|..+++.+...|++++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r 38 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR 38 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 4689999999999999999888888999988875
No 313
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.51 E-value=0.019 Score=47.68 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=49.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEecC--h-hhHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES--Q-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~~~~--~-~~~~~-i~~~~~~~g~~ 198 (314)
+++++||+|++|.+|..+++.+...|++++.+.+......+..+.++..+.. ..+..+ + ...++ +.+.....+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988889999888775321111111222333322 222222 2 12222 22233233359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999973
No 314
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.51 E-value=0.018 Score=48.11 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=50.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|+++.+|..++..+...|++++.+.+......+..+.++..+... .+ |..+ ..+.+ +.+.....+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999998888889999888753111111112223334322 22 2222 12222 22232333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|.++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999985
No 315
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.51 E-value=0.046 Score=45.23 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=28.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEE-ec
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IR 157 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~-~~ 157 (314)
++++||+|++|.+|..++..+...|++++.+ .+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r 38 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI 38 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5789999999999999998888889998887 54
No 316
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.51 E-value=0.019 Score=48.27 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=49.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecC--hh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--QL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~--~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|+++.+|...+..+...|++++++.+.....++..+.++..+... .+..+ +. ..++ +.+.....+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 56899999999999999998888889998877643211111122233344332 22222 21 2222 22222222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999985
No 317
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.51 E-value=0.044 Score=48.20 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=51.2
Q ss_pred CCCCEEEEcCCCcHHHHH--HHHHHHHcCCcEEEEecCCCCcH------------HHHHHHHhCCCcE-EEecC--h-hh
Q 021311 123 NSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGSD------------EAKEKLKGLGADE-VFTES--Q-LE 184 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~--a~~la~~~g~~vi~~~~~~~~~~------------~~~~~~~~lg~~~-~~~~~--~-~~ 184 (314)
..++++||+|+++++|++ .++.+ ..|++++++.......+ ...+.+++.|... .+..+ + +.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 45555 88999888763221111 1233445666542 33322 2 22
Q ss_pred HHH-HHHHhcCCCCCcEEEecCCCc
Q 021311 185 VKN-VKGLLANLPEPALGFNCVGGN 208 (314)
Q Consensus 185 ~~~-i~~~~~~~g~~d~v~d~~g~~ 208 (314)
.++ +.......|++|+++++++..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 222 222222334699999999975
No 318
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.056 Score=44.72 Aligned_cols=77 Identities=19% Similarity=0.165 Sum_probs=45.6
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCC-CcEEEecChhhHHHHHHHhcCC-CCCcEEEe
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKGLLANL-PEPALGFN 203 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg-~~~~~~~~~~~~~~i~~~~~~~-g~~d~v~d 203 (314)
++++|+|++|++|...+..+...|++++++.+ ++++.+.+...+ ....+..+-.+.+.+.+..... ...|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR----NQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 57999999999999988888888999888875 444544443322 1222222211222333322221 13677777
Q ss_pred cCC
Q 021311 204 CVG 206 (314)
Q Consensus 204 ~~g 206 (314)
++|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 776
No 319
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.49 E-value=0.058 Score=47.43 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=68.0
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHh-----------
Q 021311 126 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL----------- 192 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~----------- 192 (314)
++|.|.|++|++|..++.+.+.. .+++++++... ..+.-.+.+++++..++.-.++...+.+++..
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~-n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGK-NVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCC-CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999999999999999998765 56888777332 24445567788999887766654333343322
Q ss_pred -------cCCCCCcEEEecCCCc-cHHHHHHhcccCCEEEE
Q 021311 193 -------ANLPEPALGFNCVGGN-SASKVLKFLSQGGTMVT 225 (314)
Q Consensus 193 -------~~~g~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~ 225 (314)
... .+|+|+++.++. ...-.+.+++.|-++.+
T Consensus 81 ~~~~~l~~~~-~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 81 EGLCELAALP-EADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hHHHHHhcCC-CCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 222 389999998874 44667777777766555
No 320
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.49 E-value=0.026 Score=45.89 Aligned_cols=98 Identities=24% Similarity=0.275 Sum_probs=59.7
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHH----HhCCCcE--EEecChhhHHHHH
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNVK 189 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~lg~~~--~~~~~~~~~~~i~ 189 (314)
....++++++||-+|+ +.|..+..+++..+. +++++-. +++..+.+ +..|... ++..+...
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~----~~~~~~~a~~~l~~~g~~~v~~~~gd~~~----- 138 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIER----IPELAEKAKKTLKKLGYDNVEVIVGDGTL----- 138 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCeEEEECCccc-----
Confidence 4467899999999997 347777778887653 5555553 44444444 3344332 22222110
Q ss_pred HHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEc
Q 021311 190 GLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 190 ~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 227 (314)
..... +.||+|+-....... ....+.|+++|+++..-
T Consensus 139 ~~~~~-~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 139 GYEEN-APYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred CCCcC-CCcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 01111 259999765544433 67889999999988764
No 321
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.014 Score=49.36 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|..+++.+...|++++.+.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36899999999999999999999899998888753
No 322
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.47 E-value=0.03 Score=43.89 Aligned_cols=80 Identities=25% Similarity=0.378 Sum_probs=56.1
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC--cE-EEecC---hhhHHH-HHHHhcCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DE-VFTES---QLEVKN-VKGLLANLPE 197 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~--~~-~~~~~---~~~~~~-i~~~~~~~g~ 197 (314)
.+.++|+|+++++|.+..+.+...|+++.+.... +....+.++.++. +| .|..+ ..+++. +.+.....|.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~---~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD---SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecc---hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 3667899999999999999999999999877754 4555566677766 33 23322 223333 4444444456
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
++++++|+|-
T Consensus 91 psvlVncAGI 100 (256)
T KOG1200|consen 91 PSVLVNCAGI 100 (256)
T ss_pred CcEEEEcCcc
Confidence 9999999995
No 323
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.47 E-value=0.024 Score=48.93 Aligned_cols=83 Identities=19% Similarity=0.148 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHhCCCcEEE---ecCh-hhHHHHHH-HhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKGLGADEVF---TESQ-LEVKNVKG-LLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~~lg~~~~~---~~~~-~~~~~i~~-~~~~~g~ 197 (314)
.+++++|+|+++++|...++.+...|++++........ .++..+.++..|..... |-.+ ...+++.+ ... .|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 46899999999999999998888889998876543110 11222333344433222 2222 12223222 222 346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|++++++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 324
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.012 Score=48.84 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=51.0
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEE--ecC---hhhHHHH-HHHhc
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVF--TES---QLEVKNV-KGLLA 193 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~~~--~~~---~~~~~~i-~~~~~ 193 (314)
..++++++|+|++|.+|...++.+...|++++++.+.....++-.+.++..+.. .++ |.+ ......+ .....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999888888999988875321111112233333322 122 222 1222222 22222
Q ss_pred CCCCCcEEEecCCC
Q 021311 194 NLPEPALGFNCVGG 207 (314)
Q Consensus 194 ~~g~~d~v~d~~g~ 207 (314)
..+++|.++.+++.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 22359999998874
No 325
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.45 E-value=0.031 Score=46.93 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=30.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
.++++||+|+++++|.+++..+...|++++.+.+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 4789999999999999999988899999887764
No 326
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.026 Score=47.84 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=48.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
+.++++|+|++|.+|..+++.+...|++++++.+......+..+.+...+... .+ |..+. .... +.+.....+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999998888889998887753111111111223334332 22 22221 1222 22221222359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999985
No 327
>PRK09186 flagellin modification protein A; Provisional
Probab=96.44 E-value=0.023 Score=47.45 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|...+..+...|++++.+.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 47899999999999999999998899999888753
No 328
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.42 E-value=0.027 Score=47.08 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=49.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.++++||+|+++.+|..++..+...|++++.+.+. .++.+ .++..+... .+ |..+. ...+ +......
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999888899998887753 33322 223333322 22 22222 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|+++.|+|.
T Consensus 86 ~~~~d~li~~ag~ 98 (255)
T PRK06113 86 LGKVDILVNNAGG 98 (255)
T ss_pred cCCCCEEEECCCC
Confidence 3459999999984
No 329
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.029 Score=47.47 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|..+++.+...|++++++.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 46799999999999999999888889999888764
No 330
>PRK12743 oxidoreductase; Provisional
Probab=96.41 E-value=0.024 Score=47.44 Aligned_cols=83 Identities=16% Similarity=0.194 Sum_probs=50.1
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
++++||+|+++.+|..+++.+...|++++.+.+.+... ++..+.++..+... .+ |-.+. .++. +.+.....+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999998876432111 11123334455432 22 22221 2222 22222223359
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999984
No 331
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.022 Score=47.56 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EE--EecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EV--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|..+++.+...|++++.+.+. .++ ...+.. .. .|..+. ..++ +.......+++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~----~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 76 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR----APE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL 76 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----hhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999888899999888753 222 111211 12 222221 2222 22222223459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|++|.|+|.
T Consensus 77 d~vi~~ag~ 85 (252)
T PRK07856 77 DVLVNNAGG 85 (252)
T ss_pred CEEEECCCC
Confidence 999999984
No 332
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.40 E-value=0.063 Score=44.63 Aligned_cols=75 Identities=21% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|...+..+...|++++.+.+. . ....+.. ..+ |-.+. ..++ +.+.....+++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~----~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA----F-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc----h-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999888889999888753 2 1112221 122 22221 2222 22222223459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 78 d~vi~~ag~ 86 (252)
T PRK08220 78 DVLVNAAGI 86 (252)
T ss_pred CEEEECCCc
Confidence 999999885
No 333
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.023 Score=47.64 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=49.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++++|+|++|.+|.++++.+...|++++.+.+... ..+..+.+...+... .+ |..+. .++. +.+.....+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988889999887775311 111112222233322 22 22221 2222 22222223459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.++|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999984
No 334
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.39 E-value=0.044 Score=46.21 Aligned_cols=96 Identities=19% Similarity=0.159 Sum_probs=71.0
Q ss_pred hcccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 103 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
...|+++...+..+.. .++ -.|++++|.|.+..+|.-+.+++...|++|+++-.. +.
T Consensus 137 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~---T~------------------ 194 (285)
T PRK10792 137 LLRPCTPRGIMTLLER-YGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF---TK------------------ 194 (285)
T ss_pred CCCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC---CC------------------
Confidence 3567777778877766 443 369999999998889999999999999988766521 10
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++.+.+. ..|+++.++|.+.+- --+.++++..++.+|..
T Consensus 195 -----~l~~~~~---~ADIvi~avG~p~~v-~~~~vk~gavVIDvGin 233 (285)
T PRK10792 195 -----NLRHHVR---NADLLVVAVGKPGFI-PGEWIKPGAIVIDVGIN 233 (285)
T ss_pred -----CHHHHHh---hCCEEEEcCCCcccc-cHHHcCCCcEEEEcccc
Confidence 1222222 399999999987752 12788999999999844
No 335
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.026 Score=47.66 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=48.1
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecC--h-hhHHH-HHHHhcCCCCCcE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~--~-~~~~~-i~~~~~~~g~~d~ 200 (314)
+++||+|++|.+|...+..+...|++++.+.+.....++....++..+.+. .+..+ + ...+. +.......+++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999999999999998888889999888753211111122233334332 22222 1 12222 2222222235999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999985
No 336
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.38 E-value=0.039 Score=46.72 Aligned_cols=99 Identities=15% Similarity=0.103 Sum_probs=58.5
Q ss_pred HHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhC---CCcEEEecChhhHHHHHH
Q 021311 115 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL---GADEVFTESQLEVKNVKG 190 (314)
Q Consensus 115 ~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~l---g~~~~~~~~~~~~~~i~~ 190 (314)
++.+......+++++|+|+ |++|.+++..+...|++++++.+ +.++. +.++.+ +........ .
T Consensus 107 ~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R----~~~~~~~la~~~~~~~~~~~~~~~-----~--- 173 (270)
T TIGR00507 107 DLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANR----TVSKAEELAERFQRYGEIQAFSMD-----E--- 173 (270)
T ss_pred HHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhhcCceEEechh-----h---
Confidence 3433233456789999999 89999999888888987666654 33332 333333 221222111 1
Q ss_pred HhcCCCCCcEEEecCCCccH------HHHHHhcccCCEEEEEcC
Q 021311 191 LLANLPEPALGFNCVGGNSA------SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~~~------~~~~~~l~~~G~~v~~g~ 228 (314)
.... .+|+|++|++.... ......++++..++.+..
T Consensus 174 ~~~~--~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 174 LPLH--RVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred hccc--CccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 1111 49999999986432 112455777777777763
No 337
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.37 E-value=0.04 Score=46.74 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=61.4
Q ss_pred ccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhh
Q 021311 105 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 184 (314)
Q Consensus 105 ~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~ 184 (314)
.+++.......+....---.|++++|.|+++.+|...++++...|+++.++-+ ...
T Consensus 139 ~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~----~t~-------------------- 194 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS----RTQ-------------------- 194 (283)
T ss_pred cCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC----Cch--------------------
Confidence 34444333333433222357899999999666999999999999995544432 110
Q ss_pred HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 185 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 185 ~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ++|++++++|.+.. --.+.++++..++.+|...
T Consensus 195 --~L~~~~~---~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 195 --NLPELVK---QADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred --hHHHHhc---cCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 1111121 49999999987553 2236689999999988443
No 338
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.037 Score=46.68 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=70.7
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++++|.|.+..+|.-+..++...|++|+.+-.. +
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~---t-------------------- 192 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK---T-------------------- 192 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC---C--------------------
Confidence 35677777777777653223479999999998888999999999999998765421 1
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. ++.+.+. ..|+++-++|.+.+-. -+.++++..++.+|...
T Consensus 193 ~---~l~~~~~---~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 193 R---DLAAHTR---QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred C---CHHHHhh---hCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 0 1222222 3999999999876522 28899999999999543
No 339
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.36 E-value=0.041 Score=46.62 Aligned_cols=148 Identities=17% Similarity=0.230 Sum_probs=85.4
Q ss_pred CCCCCCEEeeCCCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHH--HHHHHHHhhcCCCCCEEEEcCCCcHHHH
Q 021311 62 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--ALRMLEDFTTLNSGDSIVQNGATSIVGQ 139 (314)
Q Consensus 62 ~~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~t--a~~~l~~~~~~~~~~~vlI~g~~g~~G~ 139 (314)
..+.|++....+ +|.+|........+++.+++.+- ...-+.| ++.++.+ .+++++++|=.|+++ |.
T Consensus 108 P~rig~~f~I~P----sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGcGS--GI 175 (300)
T COG2264 108 PVRIGERFVIVP----SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGCGS--GI 175 (300)
T ss_pred cEEeeeeEEECC----CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecCCh--hH
Confidence 356788888776 56665443346778888887442 1222233 3444443 256999999999833 66
Q ss_pred HHHHHHHHcCCcEEEEecCCCCcHHHHHHHH----hCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCcc----HH
Q 021311 140 CIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----AS 211 (314)
Q Consensus 140 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~----~~ 211 (314)
+++ .+..+|+..+..+|- ++...+.++ ..+........... ......+ +.+|+|+-+.=... ++
T Consensus 176 LaI-Aa~kLGA~~v~g~Di---Dp~AV~aa~eNa~~N~v~~~~~~~~~~--~~~~~~~--~~~DvIVANILA~vl~~La~ 247 (300)
T COG2264 176 LAI-AAAKLGAKKVVGVDI---DPQAVEAARENARLNGVELLVQAKGFL--LLEVPEN--GPFDVIVANILAEVLVELAP 247 (300)
T ss_pred HHH-HHHHcCCceEEEecC---CHHHHHHHHHHHHHcCCchhhhccccc--chhhccc--CcccEEEehhhHHHHHHHHH
Confidence 666 445668986666664 555544443 22322100000000 0111111 25999987663322 37
Q ss_pred HHHHhcccCCEEEEEcCC
Q 021311 212 KVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 212 ~~~~~l~~~G~~v~~g~~ 229 (314)
...+.++|+|++++.|-.
T Consensus 248 ~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 248 DIKRLLKPGGRLILSGIL 265 (300)
T ss_pred HHHHHcCCCceEEEEeeh
Confidence 788899999999998844
No 340
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.36 E-value=0.25 Score=40.25 Aligned_cols=116 Identities=7% Similarity=-0.099 Sum_probs=68.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.+.+|||.|+ |.++.-=+..+...|+++.+++.. -+++-.+.+ .-|.-..+ .+......+ . ++++||-
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~--i~~el~~l~-~~~~i~~~-~r~~~~~dl------~-g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKK--FSKEFLDLK-KYGNLKLI-KGNYDKEFI------K-DKHLIVI 91 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCC--CCHHHHHHH-hCCCEEEE-eCCCChHHh------C-CCcEEEE
Confidence 5789999999 999988788888889998877743 123322222 22322222 222221222 1 4999999
Q ss_pred cCCCccHHHHH-HhcccCCEEEEEcCCCCCCcccccccceec-ceEEEEEe
Q 021311 204 CVGGNSASKVL-KFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFW 252 (314)
Q Consensus 204 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 252 (314)
|++.+..+..+ ...+..+.+|....... ..++..+.++.+ ++++.-+.
T Consensus 92 ATdD~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEEEEC
Confidence 99988885544 44455577776653332 234444554444 46654443
No 341
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.032 Score=47.21 Aligned_cols=78 Identities=22% Similarity=0.232 Sum_probs=49.3
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCc-EE--EecChh-hHHH-HHHHhcCCCCCc
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EV--FTESQL-EVKN-VKGLLANLPEPA 199 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~-~~--~~~~~~-~~~~-i~~~~~~~g~~d 199 (314)
+++||+|++|.+|..+++.+...|.+++++.+ +.++.+.++. .+.. .. .|..+. ..++ +.+.....+++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVR----RPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999888888999988885 4444444432 2322 11 222222 1222 222222233599
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
++|.++|.
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999985
No 342
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.031 Score=46.74 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=47.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCC--cEEE--ecChh-hHH-HHHHHhcCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--DEVF--TESQL-EVK-NVKGLLANLPE 197 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~--~~~~--~~~~~-~~~-~i~~~~~~~g~ 197 (314)
++++||+|++|.+|...+..+...|++++++.+. .++.+ ..+.+.. -..+ |-.+. .+. .+.+.....++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID----AAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999998888889998888753 33322 2233321 1222 22221 121 12222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 78 ~d~vi~~ag~ 87 (257)
T PRK07074 78 VDVLVANAGA 87 (257)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 343
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.009 Score=54.59 Aligned_cols=39 Identities=8% Similarity=0.195 Sum_probs=34.9
Q ss_pred hhcCCCCCEEE----EcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 119 FTTLNSGDSIV----QNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 119 ~~~~~~~~~vl----I~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
+.++++|+++| ++|++|++|.+++|+++..|++++.+..
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~ 70 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANND 70 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCc
Confidence 46678999998 9998899999999999999999998774
No 344
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.31 E-value=0.028 Score=43.20 Aligned_cols=97 Identities=16% Similarity=0.284 Sum_probs=60.1
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
..+|+++...+..+....---.|++++|.|.+..+|.-+..++...|+++..+-.. ++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~---T~------------------- 71 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK---TK------------------- 71 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT---SS-------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC---CC-------------------
Confidence 45566666666666663334688999999999999999999999999999775521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++.+.+. ..|+|+.++|.+.+- -.++++++..++.+|..
T Consensus 72 ----~l~~~~~---~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 72 ----NLQEITR---RADIVVSAVGKPNLI-KADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ----SHHHHHT---TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CE
T ss_pred ----cccceee---eccEEeeeecccccc-ccccccCCcEEEecCCc
Confidence 1222222 399999999987651 13578999999988854
No 345
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=96.29 E-value=0.012 Score=50.07 Aligned_cols=83 Identities=14% Similarity=0.198 Sum_probs=54.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc--------------------HHHHHHHHhCCCcEEEe-cCh
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--------------------DEAKEKLKGLGADEVFT-ESQ 182 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~--------------------~~~~~~~~~lg~~~~~~-~~~ 182 (314)
.+.+|||.|+ |++|.=++|.+.+.|+..+.+++.+.-. ......++++....-++ |.+
T Consensus 65 k~s~VLVVGa-GGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~ 143 (427)
T KOG2017|consen 65 KNSSVLVVGA-GGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNE 143 (427)
T ss_pred CCccEEEEcc-CCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechh
Confidence 4589999999 9999999999999999999888654311 12223334444432222 222
Q ss_pred h-hHHHHHHHhcCCCCCcEEEecCCCccH
Q 021311 183 L-EVKNVKGLLANLPEPALGFNCVGGNSA 210 (314)
Q Consensus 183 ~-~~~~i~~~~~~~g~~d~v~d~~g~~~~ 210 (314)
. .......+..+ +|+|+||+.+..+
T Consensus 144 ~L~~sNa~~Ii~~---YdvVlDCTDN~~T 169 (427)
T KOG2017|consen 144 FLSSSNAFDIIKQ---YDVVLDCTDNVPT 169 (427)
T ss_pred hccchhHHHHhhc---cceEEEcCCCccc
Confidence 2 12334555544 9999999998543
No 346
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.073 Score=44.93 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=70.0
Q ss_pred hcccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 103 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
+..|+++...+..+.. -++ -.|++|+|.|.+..+|.-++.++...|++|.++-. ...
T Consensus 135 ~~~PcTp~avi~lL~~-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs----~t~----------------- 192 (285)
T PRK14191 135 GFVPATPMGVMRLLKH-YHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI----LTK----------------- 192 (285)
T ss_pred CCCCCcHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC----CcH-----------------
Confidence 4567777777777765 344 36999999999779999999999999999876542 111
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++.+.+. ..|+++-++|.+.+-. -+.+++|..++.+|...
T Consensus 193 -----~l~~~~~---~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 193 -----DLSFYTQ---NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred -----HHHHHHH---hCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 1122222 3999999999877621 35679999999999543
No 347
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.29 E-value=0.04 Score=44.36 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
.+.+|+|.|+ |++|..+++.+...|...+.+++.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 4589999999 9999999999999999888888764
No 348
>PRK07069 short chain dehydrogenase; Validated
Probab=96.27 E-value=0.044 Score=45.50 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=27.6
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
++|+|++|.+|...++.+...|++++.+.+.
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999998888889999888754
No 349
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.26 E-value=0.043 Score=45.40 Aligned_cols=80 Identities=25% Similarity=0.196 Sum_probs=48.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcE-EEec--Ch-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADE-VFTE--SQ-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~-~~~~--~~-~~~~~-i~~~~~~~g~ 197 (314)
+++++||+|++|.+|..++..+...|+.++...+ +.++.+. ...++... .+.. .+ ...++ +.+.....++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT----RVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999888888987766553 3333332 23344322 2222 22 12222 2222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.|+|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12936 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 350
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.25 E-value=0.04 Score=48.52 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 111 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 111 ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
|||.-++....++. ++|||+|++|-+|..++..+...|.+|+++.+.
T Consensus 2 ~~~~~~~~~~~~~~-~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 2 TAYEELRTKLVLAP-KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred chhhhhhhcccccC-CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57777766554544 789999999999999999998889999888754
No 351
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.24 E-value=0.033 Score=46.54 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=49.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADE-VF--TESQ-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|...++.+...|++++.+.+ +.++.+. ...++... .+ |-.+ ...+. +.+.....++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADI----KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3679999999999999999999889999888875 3333333 23333221 22 2222 12222 2222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 81 id~li~~ag~ 90 (257)
T PRK07067 81 IDILFNNAAL 90 (257)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 352
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.036 Score=46.42 Aligned_cols=81 Identities=20% Similarity=0.195 Sum_probs=48.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.++++||+|++|.+|..+++.+...|++++++.+. +.++.+ .+...+... .+ |..+. .... +.+....
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNR---SRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999998888899999877653 222221 222334332 22 22221 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|+++.|+|.
T Consensus 85 ~~~iD~vi~~ag~ 97 (258)
T PRK09134 85 LGPITLLVNNASL 97 (258)
T ss_pred cCCCCEEEECCcC
Confidence 2359999999984
No 353
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.22 E-value=0.034 Score=49.02 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=49.6
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCc-EEEecChhhHHHHHHHhcCCCCC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEP 198 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~-~~~~~~~~~~~~i~~~~~~~g~~ 198 (314)
-..+.+|||+|++|.+|..+++.+...|.+|+++.+. .+........+ +.. ..+..+-...+.+.+... ++
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~ 80 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD---PAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK---GC 80 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc---CC
Confidence 3467899999999999999999888889999988753 11111122222 111 122222222234444443 38
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+||.+++.
T Consensus 81 d~Vih~A~~ 89 (353)
T PLN02896 81 DGVFHVAAS 89 (353)
T ss_pred CEEEECCcc
Confidence 999999874
No 354
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.21 E-value=0.044 Score=47.62 Aligned_cols=81 Identities=17% Similarity=0.235 Sum_probs=48.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC---cEEEecChhhHHHHHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~---~~~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
.++++||+|++|.+|..++..+...|.+++++.+...............+. ...+..+-.+.+.+.+... ++|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---GCET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---CCCE
Confidence 478999999999999999998888899988777543211111111111111 1222222112233444443 3999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
||.+++.
T Consensus 81 vih~A~~ 87 (325)
T PLN02989 81 VFHTASP 87 (325)
T ss_pred EEEeCCC
Confidence 9999974
No 355
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.045 Score=45.81 Aligned_cols=84 Identities=23% Similarity=0.350 Sum_probs=49.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.++++||+|++|++|..+++.+...|++++.+.+......+..+ .++..+... .+ |..+. ..++ +.+....
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46899999999999999999988899997766543221222222 222334332 22 22221 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|+++.++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 3359999999985
No 356
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.17 E-value=0.041 Score=46.12 Aligned_cols=84 Identities=14% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|+++.+|...++.+...|++++.+.+..... ....+.++..+... .+ |-.+. .+.+ +.+.....++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999988776531101 11122233334332 22 22222 2222 2223333346
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 357
>PRK09135 pteridine reductase; Provisional
Probab=96.16 E-value=0.047 Score=45.22 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=30.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|..+++.+...|++++++.+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45799999999999999998888889999988854
No 358
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.15 E-value=0.078 Score=39.83 Aligned_cols=96 Identities=9% Similarity=0.096 Sum_probs=67.0
Q ss_pred cccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh
Q 021311 104 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 183 (314)
Q Consensus 104 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 183 (314)
++|+.+...+..+....---.|++|+|+|.+..+|.-++.++...|+++..+-.. +.
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~---t~-------------------- 63 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK---TI-------------------- 63 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC---Cc--------------------
Confidence 4555555555556553223478999999999999999999999999998877632 11
Q ss_pred hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 184 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 184 ~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++.+... ..|+++-++|.... ---+++++|..++.+|..
T Consensus 64 ---~l~~~v~---~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 64 ---QLQSKVH---DADVVVVGSPKPEK-VPTEWIKPGATVINCSPT 102 (140)
T ss_pred ---CHHHHHh---hCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCC
Confidence 0111111 39999999998743 224679999999988743
No 359
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.15 E-value=0.06 Score=44.50 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=49.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcH-HHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD-EAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~-~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~ 197 (314)
.++++||+|++|.+|...+..+...|++++++.+...... ...+.++..+... .+ |-.+. .... +.+.....++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999888999977775421111 1112223333332 22 22221 1222 2222222235
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 9999999975
No 360
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.15 E-value=0.054 Score=40.50 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=56.6
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc--------------------HHHHHHHHhCCCc-EEEecChh
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--------------------DEAKEKLKGLGAD-EVFTESQL 183 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~--------------------~~~~~~~~~lg~~-~~~~~~~~ 183 (314)
+.+|+|.|+ |++|..++..+...|...+.++|.+.-. +.-.+.++++... .+......
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 478999999 9999999988888899999888765411 1112233333322 22222221
Q ss_pred h-HHHHHHHhcCCCCCcEEEecCCCccHH-HHHHhcccCCEEEEE
Q 021311 184 E-VKNVKGLLANLPEPALGFNCVGGNSAS-KVLKFLSQGGTMVTY 226 (314)
Q Consensus 184 ~-~~~i~~~~~~~g~~d~v~d~~g~~~~~-~~~~~l~~~G~~v~~ 226 (314)
. .+.+.++.. ++|+||+|..+.... ...+..+..+.-+..
T Consensus 81 ~~~~~~~~~~~---~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~ 122 (135)
T PF00899_consen 81 IDEENIEELLK---DYDIVIDCVDSLAARLLLNEICREYGIPFID 122 (135)
T ss_dssp CSHHHHHHHHH---TSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred ccccccccccc---CCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence 1 233444443 399999999886553 333444444443333
No 361
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.12 E-value=0.044 Score=45.66 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=48.2
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EE--ecCh-hhHHH-HHHHhcCCCCCcE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~--~~~~-~~~~~-i~~~~~~~g~~d~ 200 (314)
++++|+|++|.+|...++.+...|++++.+.+.....++....+...+... .+ |-.+ ..+++ +.......+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999998888999998888753111111112223334322 22 2222 22222 2223223335999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999985
No 362
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.12 E-value=0.11 Score=42.81 Aligned_cols=103 Identities=12% Similarity=0.190 Sum_probs=59.6
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH--------------------HHHHHhCCCcEEEecChhh
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQLE 184 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~lg~~~~~~~~~~~ 184 (314)
+.+|+|.|. |++|..++..+.+.|...+.++|.+.-...+ .+.++++..+.-+...+..
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~ 89 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF 89 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence 478999999 9999999999999999999888765422221 1222333332222211111
Q ss_pred --HHHHHHHhcCCCCCcEEEecCCCccHH-HHHHh-cccCCEEEEEcCCC
Q 021311 185 --VKNVKGLLANLPEPALGFNCVGGNSAS-KVLKF-LSQGGTMVTYGGMS 230 (314)
Q Consensus 185 --~~~i~~~~~~~g~~d~v~d~~g~~~~~-~~~~~-l~~~G~~v~~g~~~ 230 (314)
.+.+..+... ++|+|+||....... .+.+. .+.+=.++..++..
T Consensus 90 i~~~~~~~l~~~--~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g 137 (231)
T cd00755 90 LTPDNSEDLLGG--DPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAG 137 (231)
T ss_pred cCHhHHHHHhcC--CCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence 1233333332 499999999875542 23333 34444555555333
No 363
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.073 Score=45.29 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=69.7
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++|.|+|.++.+|.-.+.++...|++++++-+. +.
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~---t~------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR---ST------------------- 194 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC---CC-------------------
Confidence 45677777777777663333579999999998899999999999999999877532 11
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~ 229 (314)
+ +.+.+. ..|+|+-++|.+.. ... .+++|..+|.+|..
T Consensus 195 -~---l~e~~~---~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 195 -D---AKALCR---QADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred -C---HHHHHh---cCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 1 222222 39999999998754 322 38999999999844
No 364
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.11 E-value=0.063 Score=39.12 Aligned_cols=100 Identities=22% Similarity=0.255 Sum_probs=59.9
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhCCCc--EEEecChhhHHHHHHH
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--EVFTESQLEVKNVKGL 191 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~lg~~--~~~~~~~~~~~~i~~~ 191 (314)
....+.++++++-.|+ |. |..+..+++..+...+..++. ++...+.+ +.++.. .++..+-.. ....
T Consensus 13 ~~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~---s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIER---NPEALRLIERNARRFGVSNIVIVEGDAPE--ALED- 84 (124)
T ss_pred HHcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcC---CHHHHHHHHHHHHHhCCCceEEEeccccc--cChh-
Confidence 3356778889999998 44 888888998875434444443 55555544 334432 222221111 0111
Q ss_pred hcCCCCCcEEEecCCCcc----HHHHHHhcccCCEEEEEc
Q 021311 192 LANLPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~----~~~~~~~l~~~G~~v~~g 227 (314)
..+ ++|+|+...+... +..+.+.|+++|+++...
T Consensus 85 ~~~--~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 85 SLP--EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred hcC--CCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 112 5999997654433 478889999999998754
No 365
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.10 E-value=0.074 Score=45.28 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=69.4
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
..+|+++...+..+....---.|++|+|+|.++.+|.-++.++...|+++.++-.. +.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r---T~------------------- 193 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR---TR------------------- 193 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC---CC-------------------
Confidence 45677777777777653223579999999988999999999999999988877321 11
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 230 (314)
. +.+.+. ..|+|+-|+|.+.. .. .++++|..++.+|...
T Consensus 194 -~---l~e~~~---~ADIVIsavg~~~~v~~--~~lk~GavVIDvGin~ 233 (296)
T PRK14188 194 -D---LPAVCR---RADILVAAVGRPEMVKG--DWIKPGATVIDVGINR 233 (296)
T ss_pred -C---HHHHHh---cCCEEEEecCChhhcch--heecCCCEEEEcCCcc
Confidence 0 111222 39999999998764 22 2389999999998543
No 366
>PLN02240 UDP-glucose 4-epimerase
Probab=96.10 E-value=0.054 Score=47.62 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=48.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh----CCCc-EEEecChhhHHHHHHHhcCCCCCc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPEPA 199 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~i~~~~~~~g~~d 199 (314)
+++|||+|++|.+|..+++.+...|.+++++.+...........+.. .+.. ..+..+-.+.+.+....... ++|
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-~~d 83 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-RFD 83 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-CCC
Confidence 57899999999999999988888899888876432112222222221 1111 12212212223444443333 399
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
+|++|++.
T Consensus 84 ~vih~a~~ 91 (352)
T PLN02240 84 AVIHFAGL 91 (352)
T ss_pred EEEEcccc
Confidence 99999874
No 367
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.10 E-value=0.052 Score=46.53 Aligned_cols=80 Identities=19% Similarity=0.346 Sum_probs=54.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc----EEEecChhhHHHHHHHhcCCCCCc
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQLEVKNVKGLLANLPEPA 199 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~i~~~~~~~g~~d 199 (314)
.+..|+|+||+|-+|.+.+..+...|.+|.+++|... .+++.+.++++... .++..+-.....+.+... +.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~---gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID---GCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-hhhhHHHHHhcccCcccceEEeccccccchHHHHHh---CCC
Confidence 5789999999999999999999999999999998753 34444566666522 222222112223333333 388
Q ss_pred EEEecCCC
Q 021311 200 LGFNCVGG 207 (314)
Q Consensus 200 ~v~d~~g~ 207 (314)
.||=++..
T Consensus 81 gVfH~Asp 88 (327)
T KOG1502|consen 81 GVFHTASP 88 (327)
T ss_pred EEEEeCcc
Confidence 88877764
No 368
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.088 Score=42.12 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=40.3
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
++||+|+++++|.+++..+... .+++.+.+.. . ....|-.+. +.+++.....+++|+++.++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~----~----------~~~~D~~~~--~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS----G----------DVQVDITDP--ASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC----C----------ceEecCCCh--HHHHHHHHhcCCCCEEEECCC
Confidence 6899999999999888776665 7777776431 1 122333322 223232222335999999998
Q ss_pred C
Q 021311 207 G 207 (314)
Q Consensus 207 ~ 207 (314)
.
T Consensus 65 ~ 65 (199)
T PRK07578 65 K 65 (199)
T ss_pred C
Confidence 4
No 369
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.09 E-value=0.046 Score=45.21 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
+.+++||+|++|.+|..++..+...|.+++++++.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 35799999999999999999998899998776754
No 370
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.034 Score=46.19 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=47.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH----HhC--CCc-EEE--ecChh-hHHH-HHHHhc
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL--GAD-EVF--TESQL-EVKN-VKGLLA 193 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~l--g~~-~~~--~~~~~-~~~~-i~~~~~ 193 (314)
+++++|+|++|++|...++.+...|++++.+.+. .++.+.+ ... +.. +.+ |..+. ...+ +.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR----TDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999998888889998888753 3333222 111 211 222 33322 2222 222222
Q ss_pred CCCCCcEEEecCCC
Q 021311 194 NLPEPALGFNCVGG 207 (314)
Q Consensus 194 ~~g~~d~v~d~~g~ 207 (314)
..+++|+++.++|.
T Consensus 78 ~~~~id~vi~~ag~ 91 (248)
T PRK08251 78 ELGGLDRVIVNAGI 91 (248)
T ss_pred HcCCCCEEEECCCc
Confidence 33359999999973
No 371
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.08 E-value=0.091 Score=41.10 Aligned_cols=98 Identities=27% Similarity=0.311 Sum_probs=63.0
Q ss_pred hcCCCCCEEEEcCCCcHHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEecChhhHHHHHHHhcC
Q 021311 120 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN 194 (314)
Q Consensus 120 ~~~~~~~~vlI~g~~g~~G~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~i~~~~~~ 194 (314)
.++++|+.++=+|+. .|..++++++.. ..+++++-+ ++++.+.. .+||.+.+..-..+-.+.+. +
T Consensus 30 L~~~~g~~l~DIGaG--tGsi~iE~a~~~p~~~v~AIe~----~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~----~ 99 (187)
T COG2242 30 LRPRPGDRLWDIGAG--TGSITIEWALAGPSGRVIAIER----DEEALELIERNAARFGVDNLEVVEGDAPEALP----D 99 (187)
T ss_pred hCCCCCCEEEEeCCC--ccHHHHHHHHhCCCceEEEEec----CHHHHHHHHHHHHHhCCCcEEEEeccchHhhc----C
Confidence 678999999988883 366777777433 357777774 55665555 45776643322222122222 2
Q ss_pred CCCCcEEEecCCCcc---HHHHHHhcccCCEEEEEc
Q 021311 195 LPEPALGFNCVGGNS---ASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 195 ~g~~d~v~d~~g~~~---~~~~~~~l~~~G~~v~~g 227 (314)
...+|.+|---|... ++.++..|+++|++|.-.
T Consensus 100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 113999997776432 488999999999998654
No 372
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.08 E-value=0.0097 Score=42.73 Aligned_cols=92 Identities=20% Similarity=0.197 Sum_probs=56.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHH-HcCCcEEEEecCCCCcHHHHHHHHh------CCCcEEEecChhhHHHHHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKG------LGADEVFTESQLEVKNVKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~-~~g~~vi~~~~~~~~~~~~~~~~~~------lg~~~~~~~~~~~~~~i~~~~~~~g 196 (314)
|+.+||-.|+ +.|..++.+++ ..+++++++-- +++..+.+++ .+....+...+. .......+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~~~~~i~~~~~d~-----~~~~~~~~ 69 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDI----SPEMLEIARERAAEEGLSDRITFVQGDA-----EFDPDFLE 69 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEES----SHHHHHHHHHHHHHTTTTTTEEEEESCC-----HGGTTTSS
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCCeEEEECcc-----ccCcccCC
Confidence 6889999998 34888888888 46778666653 6666666642 122222222221 11111112
Q ss_pred CCcEEEecC-CCc----c------HHHHHHhcccCCEEEEE
Q 021311 197 EPALGFNCV-GGN----S------ASKVLKFLSQGGTMVTY 226 (314)
Q Consensus 197 ~~d~v~d~~-g~~----~------~~~~~~~l~~~G~~v~~ 226 (314)
++|+|+... ... . ++.+.+.|+|+|+++.-
T Consensus 70 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 70 PFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp CEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 599999888 321 1 46788899999999863
No 373
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.019 Score=48.06 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|++|.+|...++.+...|++++++.+.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999999999888889999888753
No 374
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.03 E-value=0.06 Score=46.74 Aligned_cols=81 Identities=20% Similarity=0.297 Sum_probs=49.0
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCC--c-EEEecChhhHHHHHHHhcCCCCC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA--D-EVFTESQLEVKNVKGLLANLPEP 198 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~--~-~~~~~~~~~~~~i~~~~~~~g~~ 198 (314)
..|++|||+|++|.+|..++..+...|.+++++++..... ++...+.. .+. . ..+..+-.+.+.+.+... ++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~ 78 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR-KKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---GC 78 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch-HHHHHHHhccCCCCceEEEecCCCCcchHHHHHh---CC
Confidence 3578999999999999999988888899998888653211 22222211 111 1 222222112223444333 39
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+||.+++.
T Consensus 79 d~vih~A~~ 87 (322)
T PLN02986 79 DAVFHTASP 87 (322)
T ss_pred CEEEEeCCC
Confidence 999999973
No 375
>PRK05599 hypothetical protein; Provisional
Probab=96.02 E-value=0.042 Score=45.69 Aligned_cols=80 Identities=21% Similarity=0.199 Sum_probs=46.0
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc--EEE--ecChh-hHHHH-HHHhcCCCCCcE
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVF--TESQL-EVKNV-KGLLANLPEPAL 200 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~~~--~~~~~-~~~~i-~~~~~~~g~~d~ 200 (314)
+++|+|+++++|.+.+..+. .|.+++.+.+.....++..+.+++.+.. ..+ |-.+. ..+.+ .+.....|++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999987766 4999888875321111112233344432 222 22221 22222 222222346999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
+++++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9999985
No 376
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.01 E-value=0.061 Score=46.61 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=47.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHH-HHHhCC---Cc-EE--EecChh-hHHHH-HHHhcC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKE-KLKGLG---AD-EV--FTESQL-EVKNV-KGLLAN 194 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g-~~vi~~~~~~~~~~~~~~-~~~~lg---~~-~~--~~~~~~-~~~~i-~~~~~~ 194 (314)
+++++|+|+++++|.+++..+...| ++++.+.+. +++.+ ..+.++ .. .. .|-.+. ..+.+ .+....
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRD----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999998888889 888887753 33322 223332 11 12 233222 22222 222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|++++++|.
T Consensus 79 ~~~iD~lI~nAG~ 91 (314)
T TIGR01289 79 GRPLDALVCNAAV 91 (314)
T ss_pred CCCCCEEEECCCc
Confidence 2359999999874
No 377
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.00 E-value=0.069 Score=44.28 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=49.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEecC--hh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTES--QL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~~-~~~~~--~~-~~~~-i~~~~~~ 194 (314)
.+++++|+|++|.+|..++..+...|++++++.+. +++.. +.++..+.+. .+..+ +. .+++ +.+....
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC---cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999998888889998866542 22222 2223333322 22222 21 1222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+.+|++|.|+|.
T Consensus 82 ~~~id~vi~~ag~ 94 (247)
T PRK12935 82 FGKVDILVNNAGI 94 (247)
T ss_pred cCCCCEEEECCCC
Confidence 3459999999985
No 378
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.00 E-value=0.063 Score=43.39 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=60.2
Q ss_pred HHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCc---EEEecChhhHHH
Q 021311 117 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGAD---EVFTESQLEVKN 187 (314)
Q Consensus 117 ~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~lg~~---~~~~~~~~~~~~ 187 (314)
.+...++++++||-.|+ +.|..+..+++..+ .+++++-. +++..+.+ ...+.. .++..+... .
T Consensus 65 ~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~----~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~--~ 136 (205)
T PRK13944 65 CELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEI----VKELAIYAAQNIERLGYWGVVEVYHGDGKR--G 136 (205)
T ss_pred HHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCcEEEEECCccc--C
Confidence 34467889999999997 34777777787764 45655553 44444333 344432 222222110 0
Q ss_pred HHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEc
Q 021311 188 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 188 i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 227 (314)
+ ...+.||.|+-+...... ..+.+.|+++|+++..-
T Consensus 137 ~----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 137 L----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred C----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 1 111259999877665444 67789999999998754
No 379
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.97 E-value=0.087 Score=44.48 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=70.5
Q ss_pred hcccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 103 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
...|+++...+..+.. -++ -.|++++|.|.+..+|.-+..++...|++|.++-.. +.
T Consensus 142 ~~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~---T~------------------ 199 (287)
T PRK14176 142 GLVPCTPHGVIRALEE-YGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF---TD------------------ 199 (287)
T ss_pred CCCCCcHHHHHHHHHH-cCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc---CC------------------
Confidence 4567777777777766 444 479999999998889999999999999988665521 10
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++.+.+. ..|+++.++|.+.+- --++++++..++.+|..
T Consensus 200 -----~l~~~~~---~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 200 -----DLKKYTL---DADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred -----CHHHHHh---hCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 1222222 399999999987652 23588999999999954
No 380
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.055 Score=44.88 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=47.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLANL 195 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~ 195 (314)
++++||+|++|.+|...++.+...|++++...+. ++++. +.++..+... .+ |-.+. ..++ +.+.....
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR---NRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC---CHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 4689999999999999998888889987765432 22222 2233344332 22 22221 2222 22222223
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
+++|+++.|+|.
T Consensus 79 ~~id~li~~ag~ 90 (248)
T PRK06123 79 GRLDALVNNAGI 90 (248)
T ss_pred CCCCEEEECCCC
Confidence 459999999985
No 381
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.032 Score=45.76 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=46.2
Q ss_pred EEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhC--CCc-EEEecChhhHHHHHHHhcCCCCCcEEEec
Q 021311 129 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGFNC 204 (314)
Q Consensus 129 lI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~l--g~~-~~~~~~~~~~~~i~~~~~~~g~~d~v~d~ 204 (314)
||+|++|.+|...++.+...|++++.+.+. .++.+. ...+ +.. +.+..+-.+.+++.+.....+++|.++.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRS----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999998888899999888753 333222 2222 222 22322222223344433333459999999
Q ss_pred CCC
Q 021311 205 VGG 207 (314)
Q Consensus 205 ~g~ 207 (314)
+|.
T Consensus 77 ag~ 79 (230)
T PRK07041 77 AAD 79 (230)
T ss_pred CCC
Confidence 985
No 382
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.96 E-value=0.053 Score=46.77 Aligned_cols=108 Identities=20% Similarity=0.228 Sum_probs=66.6
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHh-CCCcEE--EecChhhHHHHHHH----hcCC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEV--FTESQLEVKNVKGL----LANL 195 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-lg~~~~--~~~~~~~~~~i~~~----~~~~ 195 (314)
-.+.+++|+|+++++|..++.-+...|++|+..++.....++..+.+.. .....+ +.-+-.+.+.++.. ....
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3568999999999999999999999999999999753222333333332 322222 11121122232222 2222
Q ss_pred CCCcEEEecCCCc------------------------cHHHHHHhcccC--CEEEEEcCCC
Q 021311 196 PEPALGFNCVGGN------------------------SASKVLKFLSQG--GTMVTYGGMS 230 (314)
Q Consensus 196 g~~d~v~d~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~ 230 (314)
++.|+.++++|-- .+..+++.|+.. +|+|.+++..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 3599999999831 114455666544 8999998654
No 383
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.95 E-value=0.27 Score=40.32 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=60.1
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCc--EEEEecCC----CCcH-----HHHHHHHhCCCcEEEecChhhHHHHHHH
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIH--SINIIRDR----AGSD-----EAKEKLKGLGADEVFTESQLEVKNVKGL 191 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~--vi~~~~~~----~~~~-----~~~~~~~~lg~~~~~~~~~~~~~~i~~~ 191 (314)
-.+.+++|.|+ |+.|..++..+...|++ .+.+++.+ .... ....+++.++... .+ .. +.+.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~---l~~~ 94 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT---LKEA 94 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC---HHHH
Confidence 45689999999 99999999888888998 77666553 1111 1233444443211 11 11 1111
Q ss_pred hcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCC
Q 021311 192 LANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 192 ~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~ 229 (314)
.. ++|+++++++...+ ...++.|.++..++.+.++
T Consensus 95 l~---~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 95 LK---GADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred Hh---cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence 22 38999999985444 5777888887776666533
No 384
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.94 E-value=0.06 Score=44.59 Aligned_cols=86 Identities=14% Similarity=0.200 Sum_probs=52.8
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHH--------------------HHHHHhCCCcEEEecChh-
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQL- 183 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~lg~~~~~~~~~~- 183 (314)
+.+|+|.|+ |++|..++..+...|...+.++|.+.-..++ .+.++++..+.-+.....
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 378999999 9999999999999999999888764422111 123333433322221111
Q ss_pred -hHHHHHHHhcCCCCCcEEEecCCCccHHHHH
Q 021311 184 -EVKNVKGLLANLPEPALGFNCVGGNSASKVL 214 (314)
Q Consensus 184 -~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~ 214 (314)
..+.+.++.. ++|+|+||..+......+
T Consensus 103 i~~~~~~~~~~---~~DlVvd~~D~~~~r~~l 131 (240)
T TIGR02355 103 LDDAELAALIA---EHDIVVDCTDNVEVRNQL 131 (240)
T ss_pred CCHHHHHHHhh---cCCEEEEcCCCHHHHHHH
Confidence 1122333333 399999999886654433
No 385
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.94 E-value=0.056 Score=44.87 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=47.3
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCcE-EEecC--h-hhHHH-HHHHhcCCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLP 196 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~~-~~~~~--~-~~~~~-i~~~~~~~g 196 (314)
+++||+|++|++|..+++.+...|++++.+.+. .+++. +.++..+... .+..+ + ...+. +.+.....+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR---DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 589999999999999998888889998776532 22222 2233333332 22222 1 12222 222222233
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|+++.++|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06947 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCcc
Confidence 59999999984
No 386
>PRK05855 short chain dehydrogenase; Validated
Probab=95.93 E-value=0.045 Score=51.64 Aligned_cols=80 Identities=23% Similarity=0.236 Sum_probs=50.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH----HHHhCCCcE-EE--ecChh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~ 194 (314)
.+.++||+|++|++|..+++.+...|++++.+.+. .++.+ .++..|... .+ |-.+. ..++ +.+....
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDID----EAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46889999999999999998888899998888753 33332 223334322 22 22222 2222 2222223
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.|++|++++|+|.
T Consensus 390 ~g~id~lv~~Ag~ 402 (582)
T PRK05855 390 HGVPDIVVNNAGI 402 (582)
T ss_pred cCCCcEEEECCcc
Confidence 3469999999985
No 387
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.079 Score=44.17 Aligned_cols=83 Identities=16% Similarity=0.140 Sum_probs=49.0
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
.+++||+|++|.+|..++..+...|++++++.+..... .+..+.++..+.. ..+ |..+. ...+ +.......+++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36899999999999999988888899998877542111 1112222333332 222 22221 2222 22232333459
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+++.|+|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999999874
No 388
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.92 E-value=0.056 Score=45.00 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=29.9
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
++++||+|++|.+|...+..+...|.+++++.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999998888889998888853
No 389
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.91 E-value=0.08 Score=43.10 Aligned_cols=99 Identities=21% Similarity=0.230 Sum_probs=59.2
Q ss_pred HHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHH----HhCCCcE--EEecChhhHHHH
Q 021311 117 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADE--VFTESQLEVKNV 188 (314)
Q Consensus 117 ~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~lg~~~--~~~~~~~~~~~i 188 (314)
.+...++++++||-.|+ +.|..++.+++..+. +++++-. +++..+.+ +++|.+. ++..+..
T Consensus 70 ~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~----~~~~~~~A~~~~~~~g~~~v~~~~~d~~----- 138 (215)
T TIGR00080 70 TELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIER----IPELAEKAERRLRKLGLDNVIVIVGDGT----- 138 (215)
T ss_pred HHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCeEEEECCcc-----
Confidence 34467899999999997 347777778887654 3555542 44444444 3455432 2211111
Q ss_pred HHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEc
Q 021311 189 KGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 189 ~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 227 (314)
+.....+.||+|+-+...... ....+.|+++|+++..-
T Consensus 139 -~~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 139 -QGWEPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred -cCCcccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 000111249998865544433 67789999999988754
No 390
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.91 E-value=0.088 Score=44.27 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=70.6
Q ss_pred cccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh
Q 021311 104 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 183 (314)
Q Consensus 104 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 183 (314)
..|+++...+..+....---.|++++|.|.+..+|.=+..++...|++|..+-.. + .
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~---T--------------------~ 193 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK---T--------------------K 193 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC---C--------------------C
Confidence 5677777777777663323579999999999999999999999999988655421 1 0
Q ss_pred hHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 184 EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 184 ~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 194 ---~l~~~~~---~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 194 ---NLKEVCK---KADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred ---CHHHHHh---hCCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 1222222 39999999998776 2246789999999998543
No 391
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.89 E-value=0.091 Score=44.29 Aligned_cols=97 Identities=13% Similarity=0.231 Sum_probs=71.5
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
+.+|+++...+..+....---.|++++|.|.+..+|.-+..++...+++|..+-.. +.
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~---T~------------------- 194 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK---TQ------------------- 194 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---CC-------------------
Confidence 45677777777766653333579999999999999999999999999988765521 11
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++.+.+. ..|+++-++|.+.+ ---+++++|..++.+|..
T Consensus 195 ----~l~~~~~---~ADIvIsAvGk~~~-i~~~~ik~gavVIDvGin 233 (284)
T PRK14177 195 ----NLPSIVR---QADIIVGAVGKPEF-IKADWISEGAVLLDAGYN 233 (284)
T ss_pred ----CHHHHHh---hCCEEEEeCCCcCc-cCHHHcCCCCEEEEecCc
Confidence 1222232 39999999998776 225788999999999954
No 392
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.88 E-value=0.043 Score=42.02 Aligned_cols=84 Identities=19% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh----hhHHH-HHHHhcCCC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKN-VKGLLANLP 196 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~----~~~~~-i~~~~~~~g 196 (314)
-.+|-.-||+|+++++|.+++..+...|+.++..--+ ...-.+.++++|...++...+ .++.. +...-...|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp---~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLP---QSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCC---cccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 3456677999999999999999998899999887765 344457889999988876543 22221 222223345
Q ss_pred CCcEEEecCCCc
Q 021311 197 EPALGFNCVGGN 208 (314)
Q Consensus 197 ~~d~v~d~~g~~ 208 (314)
..|+.++|+|..
T Consensus 83 rld~~vncagia 94 (260)
T KOG1199|consen 83 RLDALVNCAGIA 94 (260)
T ss_pred ceeeeeecccee
Confidence 699999999963
No 393
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.87 E-value=0.28 Score=35.39 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=62.3
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|+|+|. |.+|+..++.++..+.+++++.. ++++.+.+++.|. .++..+..+.+.+++..-. +++.++-+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~----d~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~--~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDR----DPERVEELREEGV-EVIYGDATDPEVLERAGIE--KADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEES----SHHHHHHHHHTTS-EEEES-TTSHHHHHHTTGG--CESEEEEESSS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEEC----CcHHHHHHHhccc-ccccccchhhhHHhhcCcc--ccCEEEEccCC
Confidence 678999 99999999999996656666663 7788888888884 4555554444455554333 48999988887
Q ss_pred ccH----HHHHHhcccCCEEEEEc
Q 021311 208 NSA----SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 208 ~~~----~~~~~~l~~~G~~v~~g 227 (314)
+.. ...++.+.+..+++...
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEE
Confidence 654 34445566777777654
No 394
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.87 E-value=0.12 Score=46.11 Aligned_cols=93 Identities=23% Similarity=0.305 Sum_probs=55.9
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCc-EEEEecCCCCcHHHHHHHHh--CCCc-EEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG--LGAD-EVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~--lg~~-~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
|+|+|+ |.+|..+++.+....-. .+++++. +.++.+.+.+ .+.. ....-+-.+.+.+.+...+ .|+|++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR---NPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEES---SHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC---CHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEEE
Confidence 789999 99999999988877653 5555543 5666555432 2222 1222222233456666655 799999
Q ss_pred cCCCccH-HHHHHhcccCCEEEEEc
Q 021311 204 CVGGNSA-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 204 ~~g~~~~-~~~~~~l~~~G~~v~~g 227 (314)
|+|.... .-+..|+..+-.+|..+
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred CCccchhHHHHHHHHHhCCCeeccc
Confidence 9998754 45556778888888843
No 395
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.86 E-value=0.15 Score=42.85 Aligned_cols=104 Identities=15% Similarity=0.208 Sum_probs=59.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcH--------------------HHHHHHHhCCCcE-EEecCh
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD--------------------EAKEKLKGLGADE-VFTESQ 182 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~--------------------~~~~~~~~lg~~~-~~~~~~ 182 (314)
.+.+|+|.|+ |++|..++..+...|...+.+++.+.-.. .-.+.+.++..+. +...++
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~ 107 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD 107 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence 4589999999 99999999999999988888886542111 1112223333332 211211
Q ss_pred h-hHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHh-cccCCEEEEEcCCC
Q 021311 183 L-EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKF-LSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~-~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~-l~~~G~~v~~g~~~ 230 (314)
. ..+.+.++... ++|+|+||.+.... ..+.+. .+.+-.++..++..
T Consensus 108 ~i~~e~~~~ll~~--~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 108 FITPDNVAEYMSA--GFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred ccChhhHHHHhcC--CCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 1 11233333322 49999999997444 223333 34445566666443
No 396
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.047 Score=52.46 Aligned_cols=79 Identities=22% Similarity=0.326 Sum_probs=49.8
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EE--ecChh-hHHH-HHHHhcCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQL-EVKN-VKGLLANL 195 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~ 195 (314)
+++++|+|++|++|..++..+...|++++++.+. +++.+. +...+... .+ |-.+. ..++ +.+.....
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 6789999999999999998888889999988853 333222 22233322 22 22221 2222 22233333
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
|++|+++.++|.
T Consensus 447 g~id~li~~Ag~ 458 (657)
T PRK07201 447 GHVDYLVNNAGR 458 (657)
T ss_pred CCCCEEEECCCC
Confidence 459999999984
No 397
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.85 E-value=0.066 Score=44.53 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=29.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
.++++||+|++|.+|..++..+...|++++.+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 3578999999999999999988888999987664
No 398
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.09 Score=43.53 Aligned_cols=84 Identities=10% Similarity=0.129 Sum_probs=49.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH----HHhCCCcE-EEec--Chh-hHHH-HHHHhcC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTE--SQL-EVKN-VKGLLAN 194 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~lg~~~-~~~~--~~~-~~~~-i~~~~~~ 194 (314)
.+.+++|+|++|.+|...+..+...|++++++.+....+.+..+. ....+... .+.. .+. ..++ +.+....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999988888899988866432223333222 22333332 2222 221 2222 2222222
Q ss_pred CCCCcEEEecCCC
Q 021311 195 LPEPALGFNCVGG 207 (314)
Q Consensus 195 ~g~~d~v~d~~g~ 207 (314)
.+++|.++.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 2359999999985
No 399
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=95.85 E-value=0.053 Score=46.94 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=45.2
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|||+|++|.+|..+++.+...|.+++++.+...............+....+..+-...+.+.+..... ++|++++++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEH-KIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhC-CCcEEEECcc
Confidence 489999999999999998888899887664321111222111111111122222211222333333222 4999999997
Q ss_pred C
Q 021311 207 G 207 (314)
Q Consensus 207 ~ 207 (314)
.
T Consensus 80 ~ 80 (328)
T TIGR01179 80 L 80 (328)
T ss_pred c
Confidence 4
No 400
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.83 E-value=0.13 Score=43.51 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=70.9
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++++|.|.+..+|.-+..++...+++|.++-.. + .
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~---t-~------------------ 193 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK---T-K------------------ 193 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC---c-h------------------
Confidence 35677777777777663323579999999999999999999999999988765421 1 0
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+.+++|..++.+|...
T Consensus 194 ----~l~~~~~---~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 194 ----NLAELTK---QADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred ----hHHHHHH---hCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 1222222 39999999998775 2245679999999998543
No 401
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.82 E-value=0.1 Score=44.04 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=72.2
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
+..|+++...+..+....---.|++++|.|.+..+|.=+..++...|++|..+-.. +.
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~---T~------------------- 193 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---TT------------------- 193 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC---CC-------------------
Confidence 46777777777777664334579999999999999999999999999988665521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+++.+. ..|+++-++|.+.+ ---++++++..++.+|...
T Consensus 194 ----dl~~~~k---~ADIvIsAvGkp~~-i~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 194 ----DLKSHTT---KADILIVAVGKPNF-ITADMVKEGAVVIDVGINH 233 (282)
T ss_pred ----CHHHHhh---hcCEEEEccCCcCc-CCHHHcCCCcEEEEecccc
Confidence 1222222 39999999999876 2237889999999999543
No 402
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.051 Score=45.52 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=49.7
Q ss_pred CCCEEEEcCC--CcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHH-HHhCCCc-EE--EecChh-hHHHH-HHHhcCC
Q 021311 124 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGAD-EV--FTESQL-EVKNV-KGLLANL 195 (314)
Q Consensus 124 ~~~~vlI~g~--~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~lg~~-~~--~~~~~~-~~~~i-~~~~~~~ 195 (314)
.+++++|+|+ ++++|.++++.+...|++++.+.+.. .++..+. ..+++.. .. .|-.+. ..+++ .+.....
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR--ALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc--chhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999998 79999999988888999988776431 1232222 2334322 12 232222 22332 2222233
Q ss_pred CCCcEEEecCCC
Q 021311 196 PEPALGFNCVGG 207 (314)
Q Consensus 196 g~~d~v~d~~g~ 207 (314)
|++|++++++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 469999999974
No 403
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.045 Score=45.31 Aligned_cols=33 Identities=24% Similarity=0.190 Sum_probs=29.6
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
++++|+|++|.+|...++.+...|++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 589999999999999999888889999888753
No 404
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=95.81 E-value=0.074 Score=44.02 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=47.9
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH----HHHHhCCCc-EEE--ecChh-hHHH-HHHHhcCCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLP 196 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~lg~~-~~~--~~~~~-~~~~-i~~~~~~~g 196 (314)
+++||+|++|.+|...+..+...|++++++... +.++. ..++..+.. ..+ |..+. .+++ +.+.....+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQ---NLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 479999999999999999888889998765432 22222 222333432 222 22222 2233 222332334
Q ss_pred CCcEEEecCCC
Q 021311 197 EPALGFNCVGG 207 (314)
Q Consensus 197 ~~d~v~d~~g~ 207 (314)
++|+++.++|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 69999999985
No 405
>PRK08328 hypothetical protein; Provisional
Probab=95.80 E-value=0.12 Score=42.69 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=30.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
.+.+|+|.|+ |++|..++..+...|...+.++|.+
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3478999999 9999999999999999988888754
No 406
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.80 E-value=0.014 Score=49.10 Aligned_cols=77 Identities=18% Similarity=0.140 Sum_probs=47.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChh-hHHH-HHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
.++++||+|++|.+|.++++.+...|++++.+.+... +.. ...... ..|-.+. ..++ +.+.....+++|+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG----DGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc----ccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999988774321 110 011111 1222222 2222 2222333346999
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.|+|.
T Consensus 81 li~~Ag~ 87 (266)
T PRK06171 81 LVNNAGI 87 (266)
T ss_pred EEECCcc
Confidence 9999984
No 407
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.1 Score=42.55 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcE-EEecChh-hHHHHHHHhcCCCCCcEEEe
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQL-EVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~-~~~~i~~~~~~~g~~d~v~d 203 (314)
++++|+|++|.+|...++.+...|++++.+.+ +.+..+.+...+... ..|-.+. .++++.+...+. ++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATAR----DAAALAALQALGAEALALDVADPASVAGLAWKLDGE-ALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC----CHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCC-CCCEEEE
Confidence 47999999999999999888788999888875 344444454444331 2222222 223332223332 4999999
Q ss_pred cCCC
Q 021311 204 CVGG 207 (314)
Q Consensus 204 ~~g~ 207 (314)
++|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 9875
No 408
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.78 E-value=0.07 Score=43.99 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=29.0
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
+++||+|++|.+|..+++.+...|++++++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 47899999999999999999899999988876
No 409
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.77 E-value=0.11 Score=43.79 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=71.3
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
..+|+++...+..+....---.|++++|.|.+..+|.=+.+++...+++|.++-.. +.
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~---T~------------------- 191 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK---TR------------------- 191 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC---CC-------------------
Confidence 35677777777777653323478999999999999999999999999988766421 11
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
++.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 192 ----~l~~~~~---~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 192 ----NLKQLTK---EADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred ----CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 1222222 39999999998876 2246889999999999543
No 410
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.77 E-value=0.087 Score=42.67 Aligned_cols=104 Identities=16% Similarity=0.119 Sum_probs=67.0
Q ss_pred HhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcC-CcEEEEecCCCCcHHHHHHH----HhCCCcEEEec-C-hhhHHHHHH
Q 021311 118 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL----KGLGADEVFTE-S-QLEVKNVKG 190 (314)
Q Consensus 118 ~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~-~-~~~~~~i~~ 190 (314)
.+++....++||=+|. .+|+.++.+|..+. -..+++++. .+++.+.+ ++.|.+..+.- . .+..+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~---~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~ 127 (219)
T COG4122 53 LLARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIER---DEERAEIARENLAEAGVDDRIELLLGGDALDVLSR 127 (219)
T ss_pred HHHHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeC---CHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh
Confidence 3456778899998884 77999999999876 334555553 56665555 45666653221 1 233344443
Q ss_pred HhcCCCCCcEEEecCCCc----cHHHHHHhcccCCEEEEEcC
Q 021311 191 LLANLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 191 ~~~~~g~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~ 228 (314)
...+.||+||--+.-. .++.+++.|++||-+|.-..
T Consensus 128 --~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 128 --LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred --ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 1223599997655542 24889999999999986543
No 411
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.77 E-value=0.064 Score=45.19 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=28.7
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
.+++|+|+++++|...++.+...|++++.+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~ 33 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH 33 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence 57899999999999999999899999988764
No 412
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.3 Score=38.38 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=54.4
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCC---cEE--EecChh-hHHH-HHHHhcCCCCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA---DEV--FTESQL-EVKN-VKGLLANLPEP 198 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~---~~~--~~~~~~-~~~~-i~~~~~~~g~~ 198 (314)
+++|+|++| +|..+++.+...|++++++.+ +.++.+.+ ..++. ... .|..+. ..++ +.......+++
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R----~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIAR----REVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHHCcCEEEEEEC----CHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 589999975 444566666667999988875 33333333 22321 112 244432 2222 33333333469
Q ss_pred cEEEecCCCccHHHHHHhcccCC------EEEEEc
Q 021311 199 ALGFNCVGGNSASKVLKFLSQGG------TMVTYG 227 (314)
Q Consensus 199 d~v~d~~g~~~~~~~~~~l~~~G------~~v~~g 227 (314)
|.+|+.+-...........+..| +++.+-
T Consensus 77 d~lv~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~ 111 (177)
T PRK08309 77 DLAVAWIHSSAKDALSVVCRELDGSSETYRLFHVL 111 (177)
T ss_pred eEEEEeccccchhhHHHHHHHHccCCCCceEEEEe
Confidence 99999988776655555555544 466654
No 413
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.75 E-value=0.074 Score=49.11 Aligned_cols=74 Identities=22% Similarity=0.268 Sum_probs=51.5
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
+.++++|+|+|. |..|++++++++..|+++++.- . ...+.+.++++|.......+ ..+.+ . .+|+|
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D-~---~~~~~~~l~~~g~~~~~~~~--~~~~l----~---~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCD-D---DPDALRPHAERGVATVSTSD--AVQQI----A---DYALV 74 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEc-C---CHHHHHHHHhCCCEEEcCcc--hHhHh----h---cCCEE
Confidence 567899999999 9999999999999999888744 2 33345556667764432212 11222 1 38999
Q ss_pred EecCCCcc
Q 021311 202 FNCVGGNS 209 (314)
Q Consensus 202 ~d~~g~~~ 209 (314)
+.+.|-+.
T Consensus 75 V~SpGi~~ 82 (488)
T PRK03369 75 VTSPGFRP 82 (488)
T ss_pred EECCCCCC
Confidence 99998753
No 414
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.74 E-value=0.11 Score=41.06 Aligned_cols=115 Identities=12% Similarity=0.188 Sum_probs=75.3
Q ss_pred hcccccHHHHHHHHHHhhcC----------CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC
Q 021311 103 ATIIVNPLTALRMLEDFTTL----------NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL 172 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l 172 (314)
..+|+++...+..|.. .++ -.|++++|.|.+..+|.=+..++...||+|.++-.. ... .....
T Consensus 31 ~~~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~---~~~---~~~~~ 103 (197)
T cd01079 31 SILPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN---GIQ---VFTRG 103 (197)
T ss_pred CccCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC---ccc---ccccc
Confidence 4567777777777765 333 578999999999999999999999999999866211 100 00000
Q ss_pred CCcEEEecCh--hh-HHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 173 GADEVFTESQ--LE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 173 g~~~~~~~~~--~~-~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
+. .-+... .+ .+.+.+.+.. .|+|+-++|.+.+.---+++++|..+|.+|..
T Consensus 104 ~~--~~hs~t~~~~~~~~l~~~~~~---ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 104 ES--IRHEKHHVTDEEAMTLDCLSQ---SDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cc--cccccccccchhhHHHHHhhh---CCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 00 000110 01 1124444433 99999999998764446789999999999954
No 415
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.069 Score=43.70 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=47.3
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEE-EecChh-hHHHHHHHhcCCCCCcEEEe
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQL-EVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~-~~~~~~-~~~~i~~~~~~~g~~d~v~d 203 (314)
+++|+|+++.+|.+.++.+...|++++.+.+ +.++.+.+ +.++...+ .|..+. .++++.+...+ ++|++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA----RRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH--HLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh--cCcEEEE
Confidence 5899999999999999988888999888774 34444333 34443322 233222 23333332222 4999999
Q ss_pred cCC
Q 021311 204 CVG 206 (314)
Q Consensus 204 ~~g 206 (314)
++|
T Consensus 76 ~ag 78 (223)
T PRK05884 76 VPA 78 (223)
T ss_pred CCC
Confidence 875
No 416
>PLN02928 oxidoreductase family protein
Probab=95.74 E-value=0.063 Score=47.11 Aligned_cols=97 Identities=14% Similarity=0.245 Sum_probs=58.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH--HhCCCcEEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL--KGLGADEVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
.|+++.|+|. |.+|..+++.++.+|++++++.+.. ..+..... +.-......+... ....+.++... .|+|
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~ell~~---aDiV 230 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW--TSEPEDGLLIPNGDVDDLVDEKG-GHEDIYEFAGE---ADIV 230 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC--ChhhhhhhccccccccccccccC-cccCHHHHHhh---CCEE
Confidence 4789999999 9999999999999999988775421 11111000 0000000000000 11123333333 8999
Q ss_pred EecCCCcc-----H-HHHHHhcccCCEEEEEc
Q 021311 202 FNCVGGNS-----A-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 202 ~d~~g~~~-----~-~~~~~~l~~~G~~v~~g 227 (314)
+.++.... + ...+..|+++..+|.++
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 88876421 2 67888999998888876
No 417
>PLN00016 RNA-binding protein; Provisional
Probab=95.72 E-value=0.12 Score=46.11 Aligned_cols=101 Identities=14% Similarity=0.208 Sum_probs=61.4
Q ss_pred CCCEEEEc----CCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHH-------HHHHHHhCCCcEEEecChhhHHHHHHHh
Q 021311 124 SGDSIVQN----GATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-------AKEKLKGLGADEVFTESQLEVKNVKGLL 192 (314)
Q Consensus 124 ~~~~vlI~----g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~-------~~~~~~~lg~~~~~~~~~~~~~~i~~~~ 192 (314)
..++|||+ |++|.+|..++..+...|.+|+++++....... +...+...+...+. .+- .++....
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~---~d~~~~~ 126 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDP---ADVKSKV 126 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecH---HHHHhhh
Confidence 34789999 999999999998888889999999875321100 01112223333222 221 1233333
Q ss_pred cCCCCCcEEEecCCCcc--HHHHHHhcccCC--EEEEEcCC
Q 021311 193 ANLPEPALGFNCVGGNS--ASKVLKFLSQGG--TMVTYGGM 229 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~~~--~~~~~~~l~~~G--~~v~~g~~ 229 (314)
... ++|+|+++.+... ...+++.++..| ++|.+++.
T Consensus 127 ~~~-~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 127 AGA-GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred ccC-CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 333 3999999987643 355666665433 78887753
No 418
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.71 E-value=0.045 Score=44.92 Aligned_cols=76 Identities=18% Similarity=0.264 Sum_probs=48.1
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCC
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 207 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~ 207 (314)
|||+||+|-+|..++..+...|..++.+.+.+. .......+ .... .+..+-.+.+.+.+...... +|+||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~--~~~~~~~~-~~~~-~~~~dl~~~~~~~~~~~~~~-~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSN--SESFEEKK-LNVE-FVIGDLTDKEQLEKLLEKAN-IDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCST--GGHHHHHH-TTEE-EEESETTSHHHHHHHHHHHT-ESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccc--cccccccc-ceEE-EEEeeccccccccccccccC-ceEEEEeecc
Confidence 799999999999999999999999988886532 22211111 2211 12121112334444444433 8999999987
Q ss_pred c
Q 021311 208 N 208 (314)
Q Consensus 208 ~ 208 (314)
.
T Consensus 76 ~ 76 (236)
T PF01370_consen 76 S 76 (236)
T ss_dssp S
T ss_pred c
Confidence 3
No 419
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.71 E-value=0.12 Score=43.76 Aligned_cols=96 Identities=16% Similarity=0.270 Sum_probs=69.3
Q ss_pred cccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChh
Q 021311 104 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL 183 (314)
Q Consensus 104 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 183 (314)
.+|+++...+..+....---.|++|.|.|.++.+|.-++.++...|++++++-. .+.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s---~t~-------------------- 193 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS---RTR-------------------- 193 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC---CCC--------------------
Confidence 567777777777765333357999999999999999999999999999877631 111
Q ss_pred hHHHHHHHhcCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCCC
Q 021311 184 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 184 ~~~~i~~~~~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 230 (314)
+ +.+.+. ..|+|+-++|.+.+ .. .++++|..++.+|...
T Consensus 194 ~---l~~~~~---~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin~ 233 (284)
T PRK14179 194 N---LAEVAR---KADILVVAIGRGHFVTK--EFVKEGAVVIDVGMNR 233 (284)
T ss_pred C---HHHHHh---hCCEEEEecCccccCCH--HHccCCcEEEEeccee
Confidence 1 111122 39999999998766 32 3499999999998543
No 420
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.69 E-value=0.078 Score=46.38 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=48.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCcEEEecChhhHHHHHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GADEVFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l---g~~~~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
.+++|||+|++|.+|..++..+...|.+++++++... ..........+ +.-..+..+-.+.+.+.+... ++|+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 83 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA---GCDL 83 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh---cCCE
Confidence 4789999999999999999988888999887775432 11111111112 211223222112233444333 3999
Q ss_pred EEecCC
Q 021311 201 GFNCVG 206 (314)
Q Consensus 201 v~d~~g 206 (314)
||.+++
T Consensus 84 vih~A~ 89 (338)
T PLN00198 84 VFHVAT 89 (338)
T ss_pred EEEeCC
Confidence 999997
No 421
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.69 E-value=0.069 Score=46.49 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=45.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHH-HHHhCCC-c-EEEecChhhHHHHHHHhcCCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKE-KLKGLGA-D-EVFTESQLEVKNVKGLLANLPEP 198 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~-~~~~lg~-~-~~~~~~~~~~~~i~~~~~~~g~~ 198 (314)
.++++||+|++|.+|..+++.+...| .+++++.+. ..+.. ....+.. . ..+..+-.+.+.+.+... ++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~---~i 75 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD----ELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR---GV 75 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC----hhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh---cC
Confidence 36899999999999999988777665 566666532 22222 1222221 1 222222222334444443 39
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+||.+++.
T Consensus 76 D~Vih~Ag~ 84 (324)
T TIGR03589 76 DYVVHAAAL 84 (324)
T ss_pred CEEEECccc
Confidence 999999874
No 422
>PLN00203 glutamyl-tRNA reductase
Probab=95.68 E-value=1.6 Score=40.59 Aligned_cols=95 Identities=15% Similarity=0.232 Sum_probs=55.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
+.+|+|+|+ |.+|.+++..+...|++.+.++.. +.++.+.+ ..++...+. .. ..+++.+... ..|+||.
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nR---s~era~~La~~~~g~~i~-~~--~~~dl~~al~---~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNR---SEERVAALREEFPDVEII-YK--PLDEMLACAA---EADVVFT 335 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeC---CHHHHHHHHHHhCCCceE-ee--cHhhHHHHHh---cCCEEEE
Confidence 689999999 999999999998899865544432 44554443 445321111 11 1112222222 3999999
Q ss_pred cCCCccH---HHHHHhccc----CC---EEEEEcCC
Q 021311 204 CVGGNSA---SKVLKFLSQ----GG---TMVTYGGM 229 (314)
Q Consensus 204 ~~g~~~~---~~~~~~l~~----~G---~~v~~g~~ 229 (314)
|++.... ...++.+.+ .+ .++.++.+
T Consensus 336 AT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 336 STSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred ccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 9987432 444444432 12 46666644
No 423
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.68 E-value=0.078 Score=46.34 Aligned_cols=84 Identities=17% Similarity=0.220 Sum_probs=52.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC----------------------cHHHHHHHHhCCCcEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG----------------------SDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~----------------------~~~~~~~~~~lg~~~~~~~~ 181 (314)
.+.+|+|.|+ |++|..++..+...|...+.++|.+.- .+...+.++++..+..+...
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 3478999999 999999999999999988888876430 01112344445443222211
Q ss_pred --hhhHHHHHHHhcCCCCCcEEEecCCCccHH
Q 021311 182 --QLEVKNVKGLLANLPEPALGFNCVGGNSAS 211 (314)
Q Consensus 182 --~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~ 211 (314)
+...+.+.++.. ++|+|+||+.+....
T Consensus 102 ~~~~~~~~~~~~~~---~~DlVid~~D~~~~r 130 (338)
T PRK12475 102 VTDVTVEELEELVK---EVDLIIDATDNFDTR 130 (338)
T ss_pred eccCCHHHHHHHhc---CCCEEEEcCCCHHHH
Confidence 111223444443 399999999875543
No 424
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.66 E-value=0.11 Score=43.25 Aligned_cols=36 Identities=11% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
.+.+|+|.|+ |++|..++..+...|...+.++|.+.
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 3489999999 99999999999999999888886654
No 425
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.66 E-value=0.093 Score=45.46 Aligned_cols=35 Identities=20% Similarity=0.460 Sum_probs=31.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.+++|||+|++|.+|..++..+...|.+++++++.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 46899999999999999998888889999888864
No 426
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.62 E-value=0.12 Score=45.96 Aligned_cols=37 Identities=16% Similarity=0.081 Sum_probs=32.5
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
+..+++|||+|++|-+|..++..+...|.+++++.+.
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence 3467899999999999999999999999999888753
No 427
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.61 E-value=0.097 Score=38.30 Aligned_cols=96 Identities=11% Similarity=0.217 Sum_probs=53.9
Q ss_pred EEEEcCCCcHHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHh-CCCcEEEecChhhHHHHHHHhcCCCCCcEEEec
Q 021311 127 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGFNC 204 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~ 204 (314)
+|.|+|++|.+|..+++++... .++.+.++..+............ +....-+...+...+.+ . +.|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL-----S--DVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH-----T--TESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHh-----h--cCCEEEec
Confidence 5889999999999999888754 55666666542211112222211 11111111111111222 1 49999999
Q ss_pred CCCccHHHHH-HhcccCCEEEEEcCC
Q 021311 205 VGGNSASKVL-KFLSQGGTMVTYGGM 229 (314)
Q Consensus 205 ~g~~~~~~~~-~~l~~~G~~v~~g~~ 229 (314)
++........ ..++.+-+++..+..
T Consensus 74 ~~~~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 74 LPHGASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred CchhHHHHHHHHHhhCCcEEEeCCHH
Confidence 9988775444 445777788887643
No 428
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.60 E-value=0.1 Score=42.90 Aligned_cols=35 Identities=14% Similarity=0.282 Sum_probs=30.3
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
+.+|+|.|+ |++|..++..+...|...+.++|.+.
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 589999999 99999999999999998888886543
No 429
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.59 E-value=0.051 Score=47.63 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=49.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHHh----CCCc-EEEecChhhHHHHHHHhcCCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~~----lg~~-~~~~~~~~~~~~i~~~~~~~g~ 197 (314)
++++|||+|++|.+|..+++.+...|.+++++.+.... ...+.+.+.. .+.. ..+..+-.+.+.+.+.....+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~- 83 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK- 83 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC-
Confidence 46899999999999999999999899999988754211 0112222210 1111 111111112234444443333
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+|+.+++.
T Consensus 84 ~d~Vih~A~~ 93 (340)
T PLN02653 84 PDEVYNLAAQ 93 (340)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 430
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.58 E-value=0.15 Score=40.46 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=53.7
Q ss_pred hhcCCCCCEEEEcCCCcHHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCCcEE-EecChh-hHHHHHHHhcCC
Q 021311 119 FTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKGLLANL 195 (314)
Q Consensus 119 ~~~~~~~~~vlI~g~~g~~G~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~~~~-~~~~~~-~~~~i~~~~~~~ 195 (314)
...+++|++||..|+ |.-+. +..+++.. +...+..++. ++.. ...+...+ .|..+. ..+.+.+.+...
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDi---s~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~ 97 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDL---QPMK----PIENVDFIRGDFTDEEVLNKIRERVGDD 97 (188)
T ss_pred hcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEec---cccc----cCCCceEEEeeCCChhHHHHHHHHhCCC
Confidence 345799999999998 44444 44445443 3333344443 2221 11233222 122222 223455545444
Q ss_pred CCCcEEEecC-----CC-------------ccHHHHHHhcccCCEEEEEc
Q 021311 196 PEPALGFNCV-----GG-------------NSASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 196 g~~d~v~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~g 227 (314)
++|+|+... |. ..+..+.++|+++|+++...
T Consensus 98 -~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 98 -KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred -CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 499999532 21 12356788999999999754
No 431
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.58 E-value=0.13 Score=43.31 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=70.8
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
..+|+++...+..+....---.|++++|.|.+..+|.=+.+++...+++|+++-.. +.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~---T~------------------- 192 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR---TK------------------- 192 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---CC-------------------
Confidence 35677777777777653323479999999999999999999999999988766521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 193 ----~l~~~~~---~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 193 ----DLPQVAK---EADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred ----CHHHHHh---hCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 1222222 39999999998776 2246789999999998543
No 432
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.58 E-value=0.024 Score=48.34 Aligned_cols=145 Identities=17% Similarity=0.239 Sum_probs=76.5
Q ss_pred CCCCCEEeeCCCCCCcccceEeeeccceEEcCCCCCHHHhhcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHH
Q 021311 63 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII 142 (314)
Q Consensus 63 ~~~Gd~V~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~ 142 (314)
+++|++.++.+ .|.++-..+...++.+.+++.+-.+- --+-..++..+.+. ..+|++||=.|.++ |.+++
T Consensus 108 ~~vg~~~~I~P----~w~~~~~~~~~~~I~idPg~AFGTG~--H~TT~lcl~~l~~~--~~~g~~vLDvG~GS--GILai 177 (295)
T PF06325_consen 108 IRVGDRLVIVP----SWEEYPEPPDEIVIEIDPGMAFGTGH--HPTTRLCLELLEKY--VKPGKRVLDVGCGS--GILAI 177 (295)
T ss_dssp EEECTTEEEEE----TT----SSTTSEEEEESTTSSS-SSH--CHHHHHHHHHHHHH--SSTTSEEEEES-TT--SHHHH
T ss_pred EEECCcEEEEC----CCcccCCCCCcEEEEECCCCcccCCC--CHHHHHHHHHHHHh--ccCCCEEEEeCCcH--HHHHH
Confidence 55687666654 55566333455677888776433221 00111233444332 67889999999733 55555
Q ss_pred HHHHHcCCcEEEEecCCCCcHHHHHHHH----h--CCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCCCccH----HH
Q 021311 143 QIARHRGIHSINIIRDRAGSDEAKEKLK----G--LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----SK 212 (314)
Q Consensus 143 ~la~~~g~~vi~~~~~~~~~~~~~~~~~----~--lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~----~~ 212 (314)
.|..+|++.+..++. ++...+.++ . +.....+....... . ++||+|+-+.-.... ..
T Consensus 178 -aA~klGA~~v~a~Di---Dp~Av~~a~~N~~~N~~~~~~~v~~~~~~~-------~--~~~dlvvANI~~~vL~~l~~~ 244 (295)
T PF06325_consen 178 -AAAKLGAKKVVAIDI---DPLAVEAARENAELNGVEDRIEVSLSEDLV-------E--GKFDLVVANILADVLLELAPD 244 (295)
T ss_dssp -HHHHTTBSEEEEEES---SCHHHHHHHHHHHHTT-TTCEEESCTSCTC-------C--S-EEEEEEES-HHHHHHHHHH
T ss_pred -HHHHcCCCeEEEecC---CHHHHHHHHHHHHHcCCCeeEEEEEecccc-------c--ccCCEEEECCCHHHHHHHHHH
Confidence 344569977777765 333333332 2 22222121111110 1 269999988776543 56
Q ss_pred HHHhcccCCEEEEEcCCC
Q 021311 213 VLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 213 ~~~~l~~~G~~v~~g~~~ 230 (314)
..+.|+++|.+++.|...
T Consensus 245 ~~~~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 245 IASLLKPGGYLILSGILE 262 (295)
T ss_dssp CHHHEEEEEEEEEEEEEG
T ss_pred HHHhhCCCCEEEEccccH
Confidence 667899999999988543
No 433
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.57 E-value=0.11 Score=42.81 Aligned_cols=80 Identities=15% Similarity=0.105 Sum_probs=47.7
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC---CCc-EEE--ecCh-hhHHH-HHHHhcCCCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GAD-EVF--TESQ-LEVKN-VKGLLANLPE 197 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l---g~~-~~~--~~~~-~~~~~-i~~~~~~~g~ 197 (314)
+++||+|++|.+|..+++.+...|++++.+.+.. .+...+....+ +.. ..+ |..+ ..+++ +.+.....++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--NDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc--HHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999988888899998887542 11222222222 222 122 2222 12222 2222222345
Q ss_pred CcEEEecCCC
Q 021311 198 PALGFNCVGG 207 (314)
Q Consensus 198 ~d~v~d~~g~ 207 (314)
+|+++.++|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 434
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.57 E-value=0.19 Score=42.38 Aligned_cols=97 Identities=15% Similarity=0.178 Sum_probs=69.8
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++|+|.|.+..+|.-+..++...|+++.++.. ...
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs----~t~------------------ 187 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS----KTE------------------ 187 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec----Chh------------------
Confidence 4567777777777766332347899999999889999999999999999887763 211
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
.+.+.+. ..|+++.++|.+.+ ---+.++++..++.+|..
T Consensus 188 ----~L~~~~~---~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 188 ----NLKAELR---QADILVSAAGKAGF-ITPDMVKPGATVIDVGIN 226 (279)
T ss_pred ----HHHHHHh---hCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence 1222332 39999999986644 112347999999999954
No 435
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.56 E-value=0.18 Score=38.55 Aligned_cols=95 Identities=16% Similarity=0.130 Sum_probs=56.2
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE-EEecChhhHHHHHHHhcCCCCCcE
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
..+++++|+|+ |.+|...++.+...|...+.+.+. +.++.+ .++.++... ..+..+ .+++ . .++|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r---~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~---~~~Dv 84 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR---TLEKAKALAERFGELGIAIAYLD--LEEL---L---AEADL 84 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC---CHHHHHHHHHHHhhcccceeecc--hhhc---c---ccCCE
Confidence 55789999998 999999998888886444444432 344433 344555321 011111 1111 1 14999
Q ss_pred EEecCCCccH-----HHHHHhcccCCEEEEEcCC
Q 021311 201 GFNCVGGNSA-----SKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 201 v~d~~g~~~~-----~~~~~~l~~~G~~v~~g~~ 229 (314)
|+.|++.... ......++++..++.++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999987542 1223456777777777643
No 436
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.52 E-value=0.096 Score=45.79 Aligned_cols=82 Identities=13% Similarity=0.224 Sum_probs=51.7
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC----------------------cHHHHHHHHhCCCcEEEecC-
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG----------------------SDEAKEKLKGLGADEVFTES- 181 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~----------------------~~~~~~~~~~lg~~~~~~~~- 181 (314)
..+|+|.|+ |++|..++..+...|...+.+++.+.- .+...+.++++....-+...
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 488999999 999999999999999988888876420 01112334445443222211
Q ss_pred -hhhHHHHHHHhcCCCCCcEEEecCCCccH
Q 021311 182 -QLEVKNVKGLLANLPEPALGFNCVGGNSA 210 (314)
Q Consensus 182 -~~~~~~i~~~~~~~g~~d~v~d~~g~~~~ 210 (314)
+...+.+.++.. ++|+|+||+.+...
T Consensus 103 ~~~~~~~~~~~~~---~~DlVid~~Dn~~~ 129 (339)
T PRK07688 103 QDVTAEELEELVT---GVDLIIDATDNFET 129 (339)
T ss_pred ccCCHHHHHHHHc---CCCEEEEcCCCHHH
Confidence 112233444443 39999999988655
No 437
>PRK08223 hypothetical protein; Validated
Probab=95.52 E-value=0.094 Score=44.36 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=31.6
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
.+.+|+|.|+ |++|..++..+...|...+.++|.+.
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 3589999999 99999999999999999999887654
No 438
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.19 Score=41.53 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=29.1
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++||+|++|.+|..+++.+...|++++++.+.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecC
Confidence 379999999999999998888889999888754
No 439
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.51 E-value=0.37 Score=40.10 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=31.5
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEec
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 157 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~ 157 (314)
-.|.+|.|.|- |.+|+.+++++...|++++++++
T Consensus 36 l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence 35789999999 99999999999999999999886
No 440
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.51 E-value=0.15 Score=43.25 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=71.4
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
+.+|+++...+..+....---.|++++|.|.+..+|.=+..++...+++|.++-.. +.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~---T~------------------- 195 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA---TR------------------- 195 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC---CC-------------------
Confidence 45677777777777663334579999999999999999999999999998766521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---++++++..++.+|...
T Consensus 196 ----~l~~~~~---~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 196 ----DLADYCS---KADILVAAVGIPNF-VKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred ----CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 1222222 39999999998776 2246788999999998543
No 441
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.50 E-value=0.093 Score=46.22 Aligned_cols=80 Identities=6% Similarity=0.123 Sum_probs=46.5
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhC--CCc-EEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~l--g~~-~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
++|||+|++|.+|..+++.+...|.+++++.+..... .+....... +.. ..+..+-.+.+.+.+...+.+ +|+||
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~-~D~Vi 79 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQ-PDCVM 79 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhcC-CCEEE
Confidence 4799999999999999999999998876666432111 111111111 111 122222112234444444333 99999
Q ss_pred ecCCC
Q 021311 203 NCVGG 207 (314)
Q Consensus 203 d~~g~ 207 (314)
.+++.
T Consensus 80 h~A~~ 84 (355)
T PRK10217 80 HLAAE 84 (355)
T ss_pred ECCcc
Confidence 99974
No 442
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.50 E-value=0.16 Score=42.86 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=71.7
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++++|.|.+..+|.=+..++...+++|.++-.. +.
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~---T~------------------- 192 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---TK------------------- 192 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---CC-------------------
Confidence 45677777777777663323579999999999999999999999889888755521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 193 ----nl~~~~~---~ADIvIsAvGkp~~-i~~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 193 ----DLSLYTR---QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR 232 (282)
T ss_pred ----CHHHHHh---hCCEEEEcCCCcCc-cCHHHcCCCCEEEEecccc
Confidence 1222232 39999999998776 2245889999999999543
No 443
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.49 E-value=0.15 Score=43.14 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=70.9
Q ss_pred hcccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 103 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
...|+++...+..+.. -++ -.|++++|.|.+..+|.=+..++...+++|.++-.. +.
T Consensus 133 ~~~PcTp~avi~lL~~-~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~---T~------------------ 190 (287)
T PRK14173 133 ALEPCTPAGVVRLLKH-YGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK---TQ------------------ 190 (287)
T ss_pred CCCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC---CC------------------
Confidence 3567777777777765 444 479999999999999999999999999988765521 10
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+ +.+.+. ..|+++-++|.+.+- --+++++|..++.+|...
T Consensus 191 --~---l~~~~~---~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 191 --D---LPAVTR---RADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred --C---HHHHHh---hCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 1 222222 399999999987652 356789999999999543
No 444
>PLN02650 dihydroflavonol-4-reductase
Probab=95.48 E-value=0.12 Score=45.40 Aligned_cols=35 Identities=20% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
..++|||+|++|.+|..++..+...|.+|+++++.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~ 38 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 45789999999999999999888889999988764
No 445
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.48 E-value=0.11 Score=42.21 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=30.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
...+|+|.|+ |++|..+++.+...|...+.++|.+
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3478999999 9999999999989999988888765
No 446
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.47 E-value=0.077 Score=45.69 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=44.3
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHHHhCC---CcEEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 127 SIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~lg---~~~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
+|||+|++|.+|..+++.+...| .+++++.+.. ...+.+.+..+. ....+..+-.+.+.+.+...+.. +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLT--YAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQ-PDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCC--cchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcC-CCEE
Confidence 48999999999999998777766 5676654321 111122222221 11223222222334544444333 9999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
|++++.
T Consensus 78 i~~a~~ 83 (317)
T TIGR01181 78 VHFAAE 83 (317)
T ss_pred EEcccc
Confidence 999975
No 447
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.46 E-value=0.15 Score=44.62 Aligned_cols=80 Identities=9% Similarity=0.069 Sum_probs=46.4
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC-c-EEEecChhhHHHHHHHhcCCCCCcEEEec
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVFTESQLEVKNVKGLLANLPEPALGFNC 204 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~-~-~~~~~~~~~~~~i~~~~~~~g~~d~v~d~ 204 (314)
+|||+|++|.+|..++..+...|.+|+++.+...........+..++. . ..+..+-.+.+.+.+..... ++|+|+.+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~ 80 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF 80 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence 689999999999999988888899988875421112222222222221 1 12222222223344433333 39999999
Q ss_pred CCC
Q 021311 205 VGG 207 (314)
Q Consensus 205 ~g~ 207 (314)
++.
T Consensus 81 a~~ 83 (338)
T PRK10675 81 AGL 83 (338)
T ss_pred Ccc
Confidence 864
No 448
>PLN02686 cinnamoyl-CoA reductase
Probab=95.45 E-value=0.12 Score=45.89 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=32.2
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
...+++|||+|++|.+|..++..+...|.+++++++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~ 86 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT 86 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457899999999999999999998899999887753
No 449
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.42 E-value=0.18 Score=43.11 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=26.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~ 156 (314)
.+++++|+|+ |+.|.+++..+...|++.+.++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~ 156 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIF 156 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEE
Confidence 5789999999 8999999988888999744444
No 450
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=42.61 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=47.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCc-EEEecChh-hHHH-HHHHhcCCCCCcE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQL-EVKN-VKGLLANLPEPAL 200 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~-~~~~~~~~-~~~~-i~~~~~~~g~~d~ 200 (314)
.++++||+|++|.+|...++.+...|.+++.+.+... . ..... ...|-.+. ..++ +.+..... ++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI----D-----DFPGELFACDLADIEQTAATLAQINEIH-PVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc----c-----ccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence 3678999999999999999998899999988886421 1 11111 22233322 2222 33333333 3899
Q ss_pred EEecCCC
Q 021311 201 GFNCVGG 207 (314)
Q Consensus 201 v~d~~g~ 207 (314)
++.|+|.
T Consensus 72 vi~~ag~ 78 (234)
T PRK07577 72 IVNNVGI 78 (234)
T ss_pred EEECCCC
Confidence 9999985
No 451
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.40 E-value=0.069 Score=51.39 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=49.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-Hh----CCCc--EEE--ecCh-hhHHH-HHHHh
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG----LGAD--EVF--TESQ-LEVKN-VKGLL 192 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~----lg~~--~~~--~~~~-~~~~~-i~~~~ 192 (314)
.++++||+|++|.+|.++++.+...|++++++.+. .++.+.+ .. .+.. ..+ |-.+ ..+++ +.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~----~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN----LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC----HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 47899999999999999999888899999888753 3332222 11 2321 122 2222 12222 22222
Q ss_pred cCCCCCcEEEecCCC
Q 021311 193 ANLPEPALGFNCVGG 207 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~ 207 (314)
...|++|++++++|.
T Consensus 489 ~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 489 LAYGGVDIVVNNAGI 503 (676)
T ss_pred HhcCCCcEEEECCCC
Confidence 233469999999985
No 452
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.40 E-value=0.19 Score=39.23 Aligned_cols=93 Identities=17% Similarity=0.272 Sum_probs=59.7
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|.|+||+|-+|...++-|...|-+|.+++++ +.+... +....++..+-.+...+..... ++|+|+++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn----~~K~~~---~~~~~i~q~Difd~~~~a~~l~---g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRN----ASKLAA---RQGVTILQKDIFDLTSLASDLA---GHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeC----hHhccc---cccceeecccccChhhhHhhhc---CCceEEEecc
Confidence 57899999999999999999999999999974 333222 1222233222222233333333 3999999998
Q ss_pred CccH----------HHHHHhcccC--CEEEEEcCC
Q 021311 207 GNSA----------SKVLKFLSQG--GTMVTYGGM 229 (314)
Q Consensus 207 ~~~~----------~~~~~~l~~~--G~~v~~g~~ 229 (314)
.... +..+..|+.- -|+..+|+.
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 7421 2355666653 488888853
No 453
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.13 Score=44.15 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=29.6
Q ss_pred CCCEEEEcCCC--cHHHHHHHHHHHHcCCcEEEEe
Q 021311 124 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINII 156 (314)
Q Consensus 124 ~~~~vlI~g~~--g~~G~~a~~la~~~g~~vi~~~ 156 (314)
.|+++||+|++ +++|.+.+..+...|++|++..
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 57999999995 8999999999999999998854
No 454
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.39 E-value=0.02 Score=42.18 Aligned_cols=95 Identities=15% Similarity=0.222 Sum_probs=51.0
Q ss_pred EEEEcCCCcHHHHHHHHHHHH-cCCcEEEEecCCCCcHHHHHHHHhCCCc--EEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 127 SIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~lg~~--~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
+|.|+|++|-+|...++.+.. .+.+....++.+.+.....+.-.-.|.. .+..+ +.+.+... .+|+++|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l~~~~~---~~DVvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDLEELLE---EADVVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-HHHHTT---H-SEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc-----hhHHHhcc---cCCEEEE
Confidence 689999999999999999987 6778777776532110111111111111 00001 12222222 2899999
Q ss_pred cCCCccHHHHHHhcccCCEEEEEcCC
Q 021311 204 CVGGNSASKVLKFLSQGGTMVTYGGM 229 (314)
Q Consensus 204 ~~g~~~~~~~~~~l~~~G~~v~~g~~ 229 (314)
++..+.....++.+...|.-+.+|..
T Consensus 74 fT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred cCChHHhHHHHHHHHhCCCCEEEECC
Confidence 99655555555555445666667743
No 455
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.36 E-value=0.19 Score=42.78 Aligned_cols=93 Identities=22% Similarity=0.167 Sum_probs=55.3
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCC-cEEEEecCCCCcHHHHHHH-HhCCCcEEEecChhhHHHHHHHhcCCCCCcE
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
..+++++|+|+ |++|.+++..+...|+ +++++.+ +.++.+.+ ..++....+.... . ..+.. ..+|+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R----~~~~a~~l~~~~~~~~~~~~~~-~---~~~~~---~~~Di 188 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNR----TVERAEELAKLFGALGKAELDL-E---LQEEL---ADFDL 188 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhhhccceeecc-c---chhcc---ccCCE
Confidence 45689999998 9999999999999995 5555543 44443333 3343211011100 0 00111 14999
Q ss_pred EEecCCCccH------HHHHHhcccCCEEEEEc
Q 021311 201 GFNCVGGNSA------SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 201 v~d~~g~~~~------~~~~~~l~~~G~~v~~g 227 (314)
|++|+..... .....+++++..++.+.
T Consensus 189 vInaTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 189 IINATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred EEECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 9999976432 22345677777777775
No 456
>PLN02214 cinnamoyl-CoA reductase
Probab=95.35 E-value=0.15 Score=44.84 Aligned_cols=103 Identities=15% Similarity=0.197 Sum_probs=59.2
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHH-HHHHHHhCCCc-EEEecChhhHHHHHHHhcCCCCCcE
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE-AKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPAL 200 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~-~~~~~~~lg~~-~~~~~~~~~~~~i~~~~~~~g~~d~ 200 (314)
..+++|||+|++|.+|..++..+...|.+|+++++....... ....+...+.. ..+..+-.+.+.+.+... ++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID---GCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh---cCCE
Confidence 357899999999999999999888889999988864211010 01111111111 122222112233443333 3999
Q ss_pred EEecCCCcc-------------HHHHHHhcccC--CEEEEEcC
Q 021311 201 GFNCVGGNS-------------ASKVLKFLSQG--GTMVTYGG 228 (314)
Q Consensus 201 v~d~~g~~~-------------~~~~~~~l~~~--G~~v~~g~ 228 (314)
||.+++... ...+++.+... .++|++++
T Consensus 85 Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 85 VFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 999997521 12344444443 37888775
No 457
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.35 E-value=0.081 Score=40.72 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=53.7
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEec--ChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE--SQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~--~~~~~~~i~~~~~~~g~~d~v 201 (314)
.|..|+++|+.-++|...++-+...|++++++.+ .++.+..+-+.-..++... +-..++.+++.....+.+|..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR----~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR----NEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEec----CHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 5788999999999999999999999999999996 5666555543333333221 111234455555554446777
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
++++|-
T Consensus 82 VNNAgv 87 (245)
T KOG1207|consen 82 VNNAGV 87 (245)
T ss_pred hccchh
Confidence 776663
No 458
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.34 E-value=0.62 Score=40.57 Aligned_cols=102 Identities=8% Similarity=0.125 Sum_probs=63.6
Q ss_pred CCCCEEEEcCCCcHHHHHHHHH-HHHcCCcEEEEecCCCCcHHHHHHH-Hh----CCCcEEEecChhhHHHHHHHhcCCC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQI-ARHRGIHSINIIRDRAGSDEAKEKL-KG----LGADEVFTESQLEVKNVKGLLANLP 196 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~l-a~~~g~~vi~~~~~~~~~~~~~~~~-~~----lg~~~~~~~~~~~~~~i~~~~~~~g 196 (314)
+..++++|+|+ |..|.+.+.. +...+++.+.+.+. ++++.+.+ +. ++... ..+.+ +.+...
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r---~~~~a~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--- 191 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSR---TFEKAYAFAQEIQSKFNTEI-YVVNS-----ADEAIE--- 191 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECC---CHHHHHHHHHHHHHhcCCcE-EEeCC-----HHHHHh---
Confidence 45688999999 8888777654 44668888777764 44443332 22 33321 11221 122222
Q ss_pred CCcEEEecCCCccHHHHHHhcccCCEEEEEcCCCCCCccccc
Q 021311 197 EPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMSKKPITVST 238 (314)
Q Consensus 197 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 238 (314)
..|+|+.|++....... +++++|-++..+|.......++++
T Consensus 192 ~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 192 EADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred cCCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 39999999988654344 899999999999965443334443
No 459
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.33 E-value=0.19 Score=42.79 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=70.3
Q ss_pred hcccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 103 ATIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
...|+++...+..+.. -++ -.|++++|.|.+..+|.=+..++...|++|.++-.. +.
T Consensus 136 ~~~PcTp~aii~lL~~-~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~---T~------------------ 193 (297)
T PRK14186 136 GLRSCTPAGVMRLLRS-QQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR---TQ------------------ 193 (297)
T ss_pred CCCCCCHHHHHHHHHH-hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC---CC------------------
Confidence 3567777777766655 343 478999999999999999999999999988766521 11
Q ss_pred hhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 182 QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 182 ~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 194 -----~l~~~~~---~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 194 -----DLASITR---EADILVAAAGRPNL-IGAEMVKPGAVVVDVGIHR 233 (297)
T ss_pred -----CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 1222222 39999999998765 2246889999999999543
No 460
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=95.33 E-value=0.2 Score=42.58 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=70.9
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
+.+|+++...+..+....---.|++++|.|.+..+|.=+..++...|++|.++-.. +.
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~---T~------------------- 202 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR---TP------------------- 202 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC---CC-------------------
Confidence 46788888877777663323469999999999999999999999999988766521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 203 ----nl~~~~~---~ADIvv~AvGk~~~-i~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 203 ----DPESIVR---EADIVIAAAGQAMM-IKGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred ----CHHHHHh---hCCEEEEcCCCcCc-cCHHHcCCCCEEEEeeccc
Confidence 1222222 39999999998643 2246789999999999544
No 461
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.32 E-value=0.16 Score=43.88 Aligned_cols=98 Identities=12% Similarity=0.149 Sum_probs=71.4
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++......+.+..---.|++++|.|.+..+|.=+..++...+++|.++-.. +.
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~---T~------------------- 249 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF---TK------------------- 249 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC---CC-------------------
Confidence 45677777777777653323479999999999999999999999999988666521 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
+ +.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 250 -n---l~~~~~---~ADIvIsAvGkp~~-v~~d~vk~GavVIDVGin~ 289 (345)
T PLN02897 250 -D---PEQITR---KADIVIAAAGIPNL-VRGSWLKPGAVVIDVGTTP 289 (345)
T ss_pred -C---HHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEccccc
Confidence 1 122222 39999999998776 3357889999999999543
No 462
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.27 E-value=0.18 Score=43.68 Aligned_cols=101 Identities=14% Similarity=0.212 Sum_probs=62.2
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcC----CcEEEEecCCCCcHHHHHHHHhCCCc--------------EEEecChhhH---
Q 021311 127 SIVQNGATSIVGQCIIQIARHRG----IHSINIIRDRAGSDEAKEKLKGLGAD--------------EVFTESQLEV--- 185 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g----~~vi~~~~~~~~~~~~~~~~~~lg~~--------------~~~~~~~~~~--- 185 (314)
+|.|.|. |.+|..+++.+...+ .++..+.+. .+.+...++.+.+.. ..++.+.-.+
T Consensus 1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~--~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~ 77 (325)
T TIGR01532 1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNEL--ADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHS 77 (325)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecC--CCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEc
Confidence 4789999 999999999887653 566666653 244555555443321 1111111000
Q ss_pred HHHHHHh-cCCCCCcEEEecCCCccH-HHHHHhcccCCEEEEEcCCCC
Q 021311 186 KNVKGLL-ANLPEPALGFNCVGGNSA-SKVLKFLSQGGTMVTYGGMSK 231 (314)
Q Consensus 186 ~~i~~~~-~~~g~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~~ 231 (314)
+...++. ... ++|+||+|+|.... +.+...++.|++.|.++.+..
T Consensus 78 ~~p~~~~w~~~-gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~~ 124 (325)
T TIGR01532 78 PTPEALPWRAL-GVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPGA 124 (325)
T ss_pred CChhhcccccc-CCCEEEEccchhccHHHHHHHHHcCCeEEEecCCCc
Confidence 0111111 112 49999999998765 677788899989999886643
No 463
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.26 E-value=0.17 Score=43.00 Aligned_cols=60 Identities=22% Similarity=0.392 Sum_probs=50.7
Q ss_pred hcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecC
Q 021311 120 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES 181 (314)
Q Consensus 120 ~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~ 181 (314)
..++||. .+|-+.+|..|.+.+.+|+..|.+.+++.... -+.+++..++.+|+..++...
T Consensus 57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEcCC
Confidence 6699999 45567779999999999999999999988654 588999999999998776544
No 464
>PRK04148 hypothetical protein; Provisional
Probab=95.26 E-value=0.61 Score=34.63 Aligned_cols=88 Identities=16% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEE
Q 021311 122 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 122 ~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
-..+.++++.|. | .|...+..+...|.+|+++- .++...+.++..+...+.+.--..--.+.+ ++|++
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaID----i~~~aV~~a~~~~~~~v~dDlf~p~~~~y~------~a~li 81 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVID----INEKAVEKAKKLGLNAFVDDLFNPNLEIYK------NAKLI 81 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhCCeEEECcCCCCCHHHHh------cCCEE
Confidence 345688999999 6 78755656667898888777 377788888888765554322111011211 48899
Q ss_pred EecCCCccHH-HHHHhcccCC
Q 021311 202 FNCVGGNSAS-KVLKFLSQGG 221 (314)
Q Consensus 202 ~d~~g~~~~~-~~~~~l~~~G 221 (314)
+.+-.....+ .+++..+.-+
T Consensus 82 ysirpp~el~~~~~~la~~~~ 102 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKIN 102 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcC
Confidence 8888776663 4444444433
No 465
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.25 E-value=0.16 Score=42.12 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|+++++|.+++..+...|++++++.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~ 38 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARR 38 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 56899999999999999998888999998888865
No 466
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.25 E-value=0.19 Score=41.97 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=28.9
Q ss_pred CCCEEEEcCCCc--HHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g--~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++||+|+++ ++|...+..+...|++++++.+.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 358899999974 79999988888889998887753
No 467
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.24 E-value=0.11 Score=45.60 Aligned_cols=81 Identities=14% Similarity=0.231 Sum_probs=48.2
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC-cHHHHHHHH-hC----CCc-EEEecChhhHHHHHHHhcCCCCC
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLK-GL----GAD-EVFTESQLEVKNVKGLLANLPEP 198 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~-~l----g~~-~~~~~~~~~~~~i~~~~~~~g~~ 198 (314)
++|||+||+|.+|..+++.+...|.+++++.+.... ..++...+. .. +.. ..+..+-.+.+.+.+...+.+ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK-P 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC-C
Confidence 479999999999999999999899999988764211 011222111 11 111 112112122334555444433 8
Q ss_pred cEEEecCCC
Q 021311 199 ALGFNCVGG 207 (314)
Q Consensus 199 d~v~d~~g~ 207 (314)
|+||.+++.
T Consensus 80 d~ViH~Aa~ 88 (343)
T TIGR01472 80 TEIYNLAAQ 88 (343)
T ss_pred CEEEECCcc
Confidence 999999974
No 468
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.24 E-value=0.17 Score=43.96 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=71.2
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
..+|+++...+..+....---.|++++|.|.+..+|.=+..++...+++|.++-.. +
T Consensus 209 ~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~---T-------------------- 265 (364)
T PLN02616 209 LFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR---T-------------------- 265 (364)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC---C--------------------
Confidence 35677777777767653323479999999999999999999999999988766521 1
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. .+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 266 ~---nl~~~~r---~ADIVIsAvGkp~~-i~~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 266 K---NPEEITR---EADIIISAVGQPNM-VRGSWIKPGAVVIDVGINP 306 (364)
T ss_pred C---CHHHHHh---hCCEEEEcCCCcCc-CCHHHcCCCCEEEeccccc
Confidence 0 1222222 39999999998776 2347889999999999543
No 469
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.21 Score=42.05 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=69.3
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+.+..---.|++++|.|.+..+|.=...++...|++|.++-.. +.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~---T~------------------- 192 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF---TK------------------- 192 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---Cc-------------------
Confidence 45677777777767653223478999999998899999999999899988643310 10
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 193 ----~l~~~~~---~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin~ 232 (281)
T PRK14183 193 ----DLKAHTK---KADIVIVGVGKPNL-ITEDMVKEGAIVIDIGINR 232 (281)
T ss_pred ----CHHHHHh---hCCEEEEecCcccc-cCHHHcCCCcEEEEeeccc
Confidence 1122222 39999999998776 2246889999999999543
No 470
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.20 E-value=0.24 Score=41.20 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=63.6
Q ss_pred HHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEecChh-hHHHH
Q 021311 116 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQL-EVKNV 188 (314)
Q Consensus 116 l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~i 188 (314)
+..+++...-++||-+|. .+|+.++.+|+.+ +.+++++-. .++..+.+ +..|...-++.... ..+.+
T Consensus 71 L~~l~~~~~ak~iLEiGT--~~GySal~la~al~~~g~v~tiE~----~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L 144 (247)
T PLN02589 71 LNMLLKLINAKNTMEIGV--YTGYSLLATALALPEDGKILAMDI----NRENYELGLPVIQKAGVAHKIDFREGPALPVL 144 (247)
T ss_pred HHHHHHHhCCCEEEEEeC--hhhHHHHHHHhhCCCCCEEEEEeC----CHHHHHHHHHHHHHCCCCCceEEEeccHHHHH
Confidence 334455666689999985 7899999999876 345555553 34444433 45564332322221 22334
Q ss_pred HHHhcC---CCCCcEEEecCCCc----cHHHHHHhcccCCEEEEEc
Q 021311 189 KGLLAN---LPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 189 ~~~~~~---~g~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g 227 (314)
.++... .+.||.||--+.-. .++.++++|++||.++.=.
T Consensus 145 ~~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~DN 190 (247)
T PLN02589 145 DQMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_pred HHHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEcC
Confidence 443321 23599998666543 2378889999999987643
No 471
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.17 E-value=0.54 Score=37.77 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHH-HhCCCcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
.|++++|+|. |.+|..+++.+...|+++++ .+. +.++.+.+ ..+++. .++..+ + ... ..|+++
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv-~D~---~~~~~~~~~~~~g~~-~v~~~~-----l---~~~--~~Dv~v 90 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIV-ADI---NEEAVARAAELFGAT-VVAPEE-----I---YSV--DADVFA 90 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEE-EcC---CHHHHHHHHHHcCCE-EEcchh-----h---ccc--cCCEEE
Confidence 5789999999 89999999999999999884 443 45555544 344643 222221 1 111 388888
Q ss_pred ecCCCccH-HHHHHhcc
Q 021311 203 NCVGGNSA-SKVLKFLS 218 (314)
Q Consensus 203 d~~g~~~~-~~~~~~l~ 218 (314)
-|+..... ...++.|+
T Consensus 91 p~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 91 PCALGGVINDDTIPQLK 107 (200)
T ss_pred ecccccccCHHHHHHcC
Confidence 77655433 55556664
No 472
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.13 E-value=0.8 Score=41.97 Aligned_cols=116 Identities=9% Similarity=-0.015 Sum_probs=68.4
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.|++|||.|+ |.++.-=++.+...|+++.++... -+++ ...+..-|.-..+ .++...+.+ . ++++||-
T Consensus 11 ~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~--~~~~-~~~l~~~~~i~~~-~~~~~~~dl----~---~~~lv~~ 78 (457)
T PRK10637 11 RDRDCLLVGG-GDVAERKARLLLDAGARLTVNALA--FIPQ-FTAWADAGMLTLV-EGPFDESLL----D---TCWLAIA 78 (457)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC--CCHH-HHHHHhCCCEEEE-eCCCChHHh----C---CCEEEEE
Confidence 5799999999 888887777777889988777632 1222 2223222321111 222221222 1 3999999
Q ss_pred cCCCccHH-HHHHhcccCCEEEEEcCCCCCCcccccccceec-ceEEEEEe
Q 021311 204 CVGGNSAS-KVLKFLSQGGTMVTYGGMSKKPITVSTSAFIFK-DLSLKGFW 252 (314)
Q Consensus 204 ~~g~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 252 (314)
|++.+..+ ...+..+..|.+|........ .++..+.++.+ ++++.-+.
T Consensus 79 at~d~~~n~~i~~~a~~~~~lvN~~d~~~~-~~f~~pa~~~~g~l~iaisT 128 (457)
T PRK10637 79 ATDDDAVNQRVSEAAEARRIFCNVVDAPKA-ASFIMPSIIDRSPLMVAVSS 128 (457)
T ss_pred CCCCHHHhHHHHHHHHHcCcEEEECCCccc-CeEEEeeEEecCCEEEEEEC
Confidence 99988775 445556677888887643322 33444444444 45555443
No 473
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.12 E-value=0.23 Score=41.96 Aligned_cols=76 Identities=11% Similarity=0.165 Sum_probs=46.8
Q ss_pred HHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcEEEecChhhHHHHHHHh
Q 021311 114 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLL 192 (314)
Q Consensus 114 ~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~i~~~~ 192 (314)
.++.. .+...+++++|.|+ |+.+.+++..+...|+..+.++.. +.++.+ .++.++.. .. +.+
T Consensus 112 ~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR---~~~~a~~la~~~~~~----~~----~~~---- 174 (272)
T PRK12550 112 KLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVAR---NEKTGKALAELYGYE----WR----PDL---- 174 (272)
T ss_pred HHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC---CHHHHHHHHHHhCCc----ch----hhc----
Confidence 34433 34455679999999 999999998888999975555543 333333 33444321 11 011
Q ss_pred cCCCCCcEEEecCCC
Q 021311 193 ANLPEPALGFNCVGG 207 (314)
Q Consensus 193 ~~~g~~d~v~d~~g~ 207 (314)
... .+|+|++|+.-
T Consensus 175 ~~~-~~dlvINaTp~ 188 (272)
T PRK12550 175 GGI-EADILVNVTPI 188 (272)
T ss_pred ccc-cCCEEEECCcc
Confidence 111 38999999863
No 474
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.12 E-value=0.28 Score=41.45 Aligned_cols=98 Identities=15% Similarity=0.179 Sum_probs=69.9
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHH----cCCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH----RGIHSINIIRDRAGSDEAKEKLKGLGADEVF 178 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~----~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~ 178 (314)
...|+++...+..+....---.|++++|.|.+..+|.=+..++.. .++++.++-. ...
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs----~t~-------------- 196 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS----RTP-------------- 196 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC----Cch--------------
Confidence 356777777777776633234789999999999999999988887 7888876652 111
Q ss_pred ecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 179 TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 179 ~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
.+.+.+. ..|+++-++|.+.+- --++++++..++.+|...
T Consensus 197 --------~l~~~~~---~ADIVI~AvG~p~li-~~~~vk~GavVIDVGi~~ 236 (286)
T PRK14184 197 --------DLAEECR---EADFLFVAIGRPRFV-TADMVKPGAVVVDVGINR 236 (286)
T ss_pred --------hHHHHHH---hCCEEEEecCCCCcC-CHHHcCCCCEEEEeeeec
Confidence 1222222 399999999987761 135669999999998543
No 475
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.12 E-value=0.16 Score=44.05 Aligned_cols=86 Identities=17% Similarity=0.178 Sum_probs=56.7
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEec
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC 204 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~ 204 (314)
|+++-|+|. |.+|...++.++.+|.++++.... ... +.....+... ...+.++.. ..|++.-.
T Consensus 142 gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~---~~~--~~~~~~~~~~--------~~~Ld~lL~---~sDiv~lh 204 (324)
T COG0111 142 GKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPY---SPR--ERAGVDGVVG--------VDSLDELLA---EADILTLH 204 (324)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCC---Cch--hhhcccccee--------cccHHHHHh---hCCEEEEc
Confidence 789999999 999999999999999999988852 111 1111111110 112333333 28888876
Q ss_pred CCC-cc----H-HHHHHhcccCCEEEEEc
Q 021311 205 VGG-NS----A-SKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 205 ~g~-~~----~-~~~~~~l~~~G~~v~~g 227 (314)
+.- +. . ...+..|+++..+|.++
T Consensus 205 ~PlT~eT~g~i~~~~~a~MK~gailIN~a 233 (324)
T COG0111 205 LPLTPETRGLINAEELAKMKPGAILINAA 233 (324)
T ss_pred CCCCcchhcccCHHHHhhCCCCeEEEECC
Confidence 654 21 1 67888899988777765
No 476
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.08 E-value=0.15 Score=44.94 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=31.2
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
.+.+|+|.|+ |++|..++..+...|...+.+++.+.
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3489999999 99999999999999999998887643
No 477
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.08 E-value=0.26 Score=41.68 Aligned_cols=98 Identities=12% Similarity=0.211 Sum_probs=70.0
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecCh
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 182 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 182 (314)
...|+++...+..+....---.|++++|.|.+..+|.=+..++...+++|.++-.. +
T Consensus 137 ~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~---T-------------------- 193 (288)
T PRK14171 137 GFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK---T-------------------- 193 (288)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC---C--------------------
Confidence 35677777777777653223578999999999999999999999999988655421 1
Q ss_pred hhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 183 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 183 ~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. .+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 194 ~---~L~~~~~---~ADIvV~AvGkp~~-i~~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 194 H---NLSSITS---KADIVVAAIGSPLK-LTAEYFNPESIVIDVGINR 234 (288)
T ss_pred C---CHHHHHh---hCCEEEEccCCCCc-cCHHHcCCCCEEEEeeccc
Confidence 0 1222232 39999999997653 2246889999999999543
No 478
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.05 E-value=0.18 Score=40.45 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=29.4
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
..+|+|.|+ |++|...++.+...|...+.++|.+
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 488999999 9999999999989999877777664
No 479
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.04 E-value=0.18 Score=41.44 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.3
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.+++++|+|+++.+|...+..+...|++++.+.+.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46799999999999999998888889998887753
No 480
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.02 E-value=0.14 Score=47.13 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCC-------------c----HHHHHHHHhCCCcEEEecChh-hH
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------------S----DEAKEKLKGLGADEVFTESQL-EV 185 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~-------------~----~~~~~~~~~lg~~~~~~~~~~-~~ 185 (314)
.+++|+|+|+ |+.|+.++..++..|.+++++-..+.- . ....+.++++|.+..++.... .+
T Consensus 140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 6789999999 999999999999999987766533210 0 134566788887765544221 10
Q ss_pred HHHHHHhcCCCCCcEEEecCCCc
Q 021311 186 KNVKGLLANLPEPALGFNCVGGN 208 (314)
Q Consensus 186 ~~i~~~~~~~g~~d~v~d~~g~~ 208 (314)
.+..+.. ++|.||.++|..
T Consensus 219 -~~~~~~~---~~D~vilAtGa~ 237 (467)
T TIGR01318 219 -SLDDLLE---DYDAVFLGVGTY 237 (467)
T ss_pred -CHHHHHh---cCCEEEEEeCCC
Confidence 1112221 399999999974
No 481
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.97 E-value=0.086 Score=44.05 Aligned_cols=74 Identities=16% Similarity=0.155 Sum_probs=49.5
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 206 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d~~g 206 (314)
+|||.|++|- |..++..+...|.++++++. ++...+.+...|...+.... .+.+.+.+.....+ +|+|+|++.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~----t~~~~~~~~~~g~~~v~~g~-l~~~~l~~~l~~~~-i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVT----TSEGKHLYPIHQALTVHTGA-LDPQELREFLKRHS-IDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEc----cCCccccccccCCceEEECC-CCHHHHHHHHHhcC-CCEEEEcCC
Confidence 7999999665 99888777778988988885 33344455555555554332 22234656665554 999999886
Q ss_pred C
Q 021311 207 G 207 (314)
Q Consensus 207 ~ 207 (314)
.
T Consensus 75 P 75 (256)
T TIGR00715 75 P 75 (256)
T ss_pred H
Confidence 4
No 482
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.96 E-value=0.21 Score=37.69 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=28.2
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
+|+|.|+ |++|...+..+...|...+.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4899999 9999999999999999888888764
No 483
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.96 E-value=0.062 Score=43.28 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=63.7
Q ss_pred HHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHc--CCcEEEEecCCCCcHHHHHHH----HhCCCcEEEecCh-hhHHHHH
Q 021311 117 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQ-LEVKNVK 189 (314)
Q Consensus 117 ~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~~~-~~~~~i~ 189 (314)
..+.+...-++||-+|. ..|+.++.+|+.+ +.+++++-. ++++.+.+ +..|...-++... +..+.+.
T Consensus 38 ~~l~~~~~~k~vLEIGt--~~GySal~la~~l~~~g~i~tiE~----~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~ 111 (205)
T PF01596_consen 38 QMLVRLTRPKRVLEIGT--FTGYSALWLAEALPEDGKITTIEI----DPERAEIARENFRKAGLDDRIEVIEGDALEVLP 111 (205)
T ss_dssp HHHHHHHT-SEEEEEST--TTSHHHHHHHHTSTTTSEEEEEES----SHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHH
T ss_pred HHHHHhcCCceEEEecc--ccccHHHHHHHhhcccceEEEecC----cHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHH
Confidence 33445556689999996 6799999999876 455555552 55555555 4455432121111 1123344
Q ss_pred HHhcC--CCCCcEEEecCCCcc----HHHHHHhcccCCEEEEEcC
Q 021311 190 GLLAN--LPEPALGFNCVGGNS----ASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 190 ~~~~~--~g~~d~v~d~~g~~~----~~~~~~~l~~~G~~v~~g~ 228 (314)
++... .+.||.||--+.-.. +..++++|++||.++.=..
T Consensus 112 ~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~ 156 (205)
T PF01596_consen 112 ELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV 156 (205)
T ss_dssp HHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred HHHhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence 44332 235999976555432 3778899999999987653
No 484
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.95 E-value=0.28 Score=41.59 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=70.0
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHc----CCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR----GIHSINIIRDRAGSDEAKEKLKGLGADEVF 178 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~ 178 (314)
...|+++...+..+....---.|++++|.|.+..+|.=+..++... +++|.++-.. +
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~---T---------------- 195 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSR---S---------------- 195 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCC---C----------------
Confidence 4567777777777766332347999999999999999999999877 5666655421 1
Q ss_pred ecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 179 TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 179 ~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. .+.+.+. ..|+++-++|.+.+- --+++++|..++.+|...
T Consensus 196 ----~---nl~~~~~---~ADIvIsAvGkp~~i-~~~~vk~gavVIDvGin~ 236 (293)
T PRK14185 196 ----K---NLKKECL---EADIIIAALGQPEFV-KADMVKEGAVVIDVGTTR 236 (293)
T ss_pred ----C---CHHHHHh---hCCEEEEccCCcCcc-CHHHcCCCCEEEEecCcc
Confidence 1 1222232 399999999987762 247899999999999543
No 485
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.95 E-value=0.16 Score=39.90 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=27.9
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCC
Q 021311 127 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 160 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~ 160 (314)
+|+|.|+ |++|...++.+...|...+.++|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 4899999 99999999888889998888887643
No 486
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.91 E-value=0.13 Score=43.79 Aligned_cols=76 Identities=9% Similarity=-0.008 Sum_probs=45.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCCCcE-EEecChhhHHHHHHHhcCCCCCcEE
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VFTESQLEVKNVKGLLANLPEPALG 201 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~i~~~~~~~g~~d~v 201 (314)
.+++++|+|+ |+.+.+++..+...|++.+.++.. +.++.+ .+..++... +.... ..+++..... .+|+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nR---t~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~---~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINR---NPDKLSRLVDLGVQVGVITRLE--GDSGGLAIEK---AAEVL 194 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHHhhhcCcceecc--chhhhhhccc---CCCEE
Confidence 5789999999 999999998888999976666643 444433 334443211 11011 0011211111 49999
Q ss_pred EecCCCc
Q 021311 202 FNCVGGN 208 (314)
Q Consensus 202 ~d~~g~~ 208 (314)
++|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998764
No 487
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.90 E-value=0.079 Score=42.73 Aligned_cols=103 Identities=19% Similarity=0.248 Sum_probs=65.1
Q ss_pred CCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHHHHHhCCC----cEE--EecC----hhhHHHHHHHhcC
Q 021311 125 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA----DEV--FTES----QLEVKNVKGLLAN 194 (314)
Q Consensus 125 ~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~lg~----~~~--~~~~----~~~~~~i~~~~~~ 194 (314)
|++++++|+.|++|++....+...|+.+.++-+ +.++.+...+|.+ ..+ +.++ .+..+..++....
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~----~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDD----SEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehh----hhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 899999999999999999888888998888875 4444444333322 111 1222 1122223333334
Q ss_pred CCCCcEEEecCCCcc------------------HHHHHHhc-----ccCCEEEEEcCCCC
Q 021311 195 LPEPALGFNCVGGNS------------------ASKVLKFL-----SQGGTMVTYGGMSK 231 (314)
Q Consensus 195 ~g~~d~v~d~~g~~~------------------~~~~~~~l-----~~~G~~v~~g~~~~ 231 (314)
.|.+|+.+|.+|-.. ...+++.+ .++|-+|.+++..+
T Consensus 81 fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 81 FGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred hCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 446999999998421 12344444 36799999987654
No 488
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.89 E-value=0.17 Score=45.13 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=30.8
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
.+.+|+|.|+ |++|..++..+...|...+.+++.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5678999999 9999999999999999888888764
No 489
>PLN02583 cinnamoyl-CoA reductase
Probab=94.89 E-value=0.3 Score=41.87 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=31.8
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 158 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~ 158 (314)
.++++|||+|++|.+|..++..+...|.+|+++++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 356799999999999999999998999999988863
No 490
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.89 E-value=0.84 Score=40.45 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=34.3
Q ss_pred hcC-CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 120 TTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 120 ~~~-~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
.+. -.|.+|.|.|- |.+|+.+++.+...|++++++.+.+
T Consensus 201 ~g~~l~G~rVaVQG~-GNVg~~aa~~l~~~GAkvva~sds~ 240 (411)
T COG0334 201 LGDDLEGARVAVQGF-GNVGQYAAEKLHELGAKVVAVSDSK 240 (411)
T ss_pred cCCCcCCCEEEEECc-cHHHHHHHHHHHHcCCEEEEEEcCC
Confidence 444 48999999999 9999999999998899999999764
No 491
>PLN02427 UDP-apiose/xylose synthase
Probab=94.88 E-value=0.2 Score=44.77 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=46.0
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHc-CCcEEEEecCCCCcHHHHHHHHhCCC------cEEEecChhhHHHHHHHhcCCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLP 196 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~lg~------~~~~~~~~~~~~~i~~~~~~~g 196 (314)
...+|||+|++|.+|..+++.+... |.+++++.+. .++...+...+. ...+..+-.+.+.+.+...+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~----~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-- 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY----NDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM-- 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC----chhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc--
Confidence 3467999999999999999888777 5788777642 223333322221 11222221222344444433
Q ss_pred CCcEEEecCC
Q 021311 197 EPALGFNCVG 206 (314)
Q Consensus 197 ~~d~v~d~~g 206 (314)
+|+||.+++
T Consensus 87 -~d~ViHlAa 95 (386)
T PLN02427 87 -ADLTINLAA 95 (386)
T ss_pred -CCEEEEccc
Confidence 999999997
No 492
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.88 E-value=0.28 Score=42.33 Aligned_cols=89 Identities=19% Similarity=0.352 Sum_probs=56.7
Q ss_pred CEEEEcCCCcHHHHHHHHHHHHcCC--cEEEEecCCCCcHHHHHHHHhCCCcEEEecChhhHHHHHHHhcCCCCCcEEEe
Q 021311 126 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 203 (314)
Q Consensus 126 ~~vlI~g~~g~~G~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~d 203 (314)
.+|.|+|+ |.+|.+.+..++..|. +++++. . ++++.+.+++.|.......+ .+. ... ..|+|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~d-r---~~~~~~~a~~~g~~~~~~~~---~~~---~~~---~aDvVii 72 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGAD-R---SAETRARARELGLGDRVTTS---AAE---AVK---GADLVIL 72 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEE-C---CHHHHHHHHhCCCCceecCC---HHH---Hhc---CCCEEEE
Confidence 68999998 9999999988888885 455444 2 56677777777753211111 111 111 3899999
Q ss_pred cCCCccH----HHHHHhcccCCEEEEEcC
Q 021311 204 CVGGNSA----SKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 204 ~~g~~~~----~~~~~~l~~~G~~v~~g~ 228 (314)
|+..... ......++++..++.+|+
T Consensus 73 avp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 73 CVPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 9987543 333445677777776664
No 493
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.85 E-value=0.38 Score=33.34 Aligned_cols=86 Identities=20% Similarity=0.220 Sum_probs=53.4
Q ss_pred EEEEcCCCcHHHHHHHHHHHHcC---CcEEEEecCCCCcHHHHHHH-HhCCCcEEEecChhhHHHHHHHhcCCCCCcEEE
Q 021311 127 SIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF 202 (314)
Q Consensus 127 ~vlI~g~~g~~G~~a~~la~~~g---~~vi~~~~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~i~~~~~~~g~~d~v~ 202 (314)
+|.++|+ |.+|.+.+.-+...| .+++.++.. ++++.+.+ ++++......... +.+. ..|+||
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r---~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~advvi 66 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSR---SPEKAAELAKEYGVQATADDNE---EAAQ-------EADVVI 66 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEES---SHHHHHHHHHHCTTEEESEEHH---HHHH-------HTSEEE
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccC---cHHHHHHHHHhhccccccCChH---Hhhc-------cCCEEE
Confidence 4677888 999999999888888 677755333 56655554 6677543321111 1121 299999
Q ss_pred ecCCCccHHHHHHh---cccCCEEEEE
Q 021311 203 NCVGGNSASKVLKF---LSQGGTMVTY 226 (314)
Q Consensus 203 d~~g~~~~~~~~~~---l~~~G~~v~~ 226 (314)
-|+-...+...++. ..++..+|.+
T Consensus 67 lav~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp E-S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred EEECHHHHHHHHHHHhhccCCCEEEEe
Confidence 99998877555544 4455566554
No 494
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.84 E-value=0.21 Score=42.30 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=54.7
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHH-HHHHhCCCcE----EEecChhhHHHHHHHhcCCCC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE----VFTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~lg~~~----~~~~~~~~~~~i~~~~~~~g~ 197 (314)
.++++++|.|+ |+.+.+++..+...|+..+.++.. +.++. +.++.++... .....+. .... .
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NR---t~~ra~~La~~~~~~~~~~~~~~~~~~--------~~~~-~ 190 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNR---TRERAEELADLFGELGAAVEAAALADL--------EGLE-E 190 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeC---CHHHHHHHHHHhhhccccccccccccc--------cccc-c
Confidence 45899999999 999999999999999866666643 34443 3333444221 1111110 0010 2
Q ss_pred CcEEEecCCCccHHH------HHHhcccCCEEEEEc
Q 021311 198 PALGFNCVGGNSASK------VLKFLSQGGTMVTYG 227 (314)
Q Consensus 198 ~d~v~d~~g~~~~~~------~~~~l~~~G~~v~~g 227 (314)
+|+++||++-..... ...++++.-.+..+-
T Consensus 191 ~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 191 ADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred cCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 899999997533211 145566666665655
No 495
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.82 E-value=0.17 Score=44.81 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=30.5
Q ss_pred CCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCC
Q 021311 124 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 159 (314)
Q Consensus 124 ~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~ 159 (314)
.+.+|+|.|+ |++|..++..+...|...+.+++.+
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3578999999 9999999999999999888888764
No 496
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.82 E-value=0.27 Score=41.93 Aligned_cols=93 Identities=16% Similarity=0.102 Sum_probs=53.4
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCcHHHHH-HHHhCC----CcEEEecChhhHHHHHHHhcCCCC
Q 021311 123 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLG----ADEVFTESQLEVKNVKGLLANLPE 197 (314)
Q Consensus 123 ~~~~~vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~lg----~~~~~~~~~~~~~~i~~~~~~~g~ 197 (314)
..+++++|+|+ |+.|.+++..+...|++.+.+++. +.++.+ .++.++ ...+.... .+.+... .
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR---~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~~---~ 192 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV---DPARAAALADELNARFPAARATAGS-----DLAAALA---A 192 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHHHHhhCCCeEEEecc-----chHhhhC---C
Confidence 35689999999 999999999999999976766654 333333 333332 11222111 1111111 3
Q ss_pred CcEEEecCCCcc-----HHHHHHhcccCCEEEEEc
Q 021311 198 PALGFNCVGGNS-----ASKVLKFLSQGGTMVTYG 227 (314)
Q Consensus 198 ~d~v~d~~g~~~-----~~~~~~~l~~~G~~v~~g 227 (314)
+|+|++|+.... .....+.+++...++.+.
T Consensus 193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 999999964321 111124466666555554
No 497
>PLN02476 O-methyltransferase
Probab=94.81 E-value=0.27 Score=41.56 Aligned_cols=107 Identities=11% Similarity=0.104 Sum_probs=64.4
Q ss_pred HHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHcC--CcEEEEecCCCCcHHHHHHH----HhCCCcEEEecChhh-HHHH
Q 021311 116 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLE-VKNV 188 (314)
Q Consensus 116 l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~lg~~~~~~~~~~~-~~~i 188 (314)
+..+.+..+.++||=+|. ..|..++.+|+.++ .+++ +++. +++..+.+ +..|..+-+.....+ .+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~-TiE~---d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L 183 (278)
T PLN02476 110 LAMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLV-ACER---DSNSLEVAKRYYELAGVSHKVNVKHGLAAESL 183 (278)
T ss_pred HHHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEE-EEEC---CHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 444566778899999986 56888888888764 3444 4443 45554444 456654322222111 1233
Q ss_pred HHHhc--CCCCCcEEEecCCCc----cHHHHHHhcccCCEEEEEcC
Q 021311 189 KGLLA--NLPEPALGFNCVGGN----SASKVLKFLSQGGTMVTYGG 228 (314)
Q Consensus 189 ~~~~~--~~g~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~ 228 (314)
.++.. ..+.||.||--+... .++.+++.|++||.++.=..
T Consensus 184 ~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DNv 229 (278)
T PLN02476 184 KSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNV 229 (278)
T ss_pred HHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 33321 123599998766643 24788899999999886543
No 498
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.81 E-value=0.34 Score=41.01 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=69.3
Q ss_pred hcccccHHHHHHHHHHhhcCCCCCEEEEcCCCcHHHHHHHHHHHHc----CCcEEEEecCCCCcHHHHHHHHhCCCcEEE
Q 021311 103 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR----GIHSINIIRDRAGSDEAKEKLKGLGADEVF 178 (314)
Q Consensus 103 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~ 178 (314)
..+|+++...+..+....---.|++++|.|.+..+|.=+..++... +++|+++-.. +
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~---T---------------- 191 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQ---S---------------- 191 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCC---C----------------
Confidence 4667777777777766332346999999999999999999999887 6666544311 1
Q ss_pred ecChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 179 TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 179 ~~~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. .+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 192 ----~---~l~~~~~---~ADIvV~AvG~p~~-i~~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 192 ----E---NLTEILK---TADIIIAAIGVPLF-IKEEMIAEKAVIVDVGTSR 232 (287)
T ss_pred ----C---CHHHHHh---hCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence 1 1222232 39999999998765 2247889999999999543
No 499
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=94.80 E-value=0.16 Score=41.73 Aligned_cols=80 Identities=24% Similarity=0.259 Sum_probs=46.7
Q ss_pred EEEcCCCcHHHHHHHHHHHHcCCcEEEEecCCCCc-HHHHHHHHhCCCcE-EE--ecChh-hHHH-HHHHhcCCCCCcEE
Q 021311 128 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPEPALG 201 (314)
Q Consensus 128 vlI~g~~g~~G~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~lg~~~-~~--~~~~~-~~~~-i~~~~~~~g~~d~v 201 (314)
+||+|++|.+|..++..+...|++++.+.+..... +...+.+...+... .+ |..+. .++. +.+.....+++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988888899988887642101 11122334445332 22 22222 2222 22222222359999
Q ss_pred EecCCC
Q 021311 202 FNCVGG 207 (314)
Q Consensus 202 ~d~~g~ 207 (314)
+.++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 999985
No 500
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.32 Score=41.12 Aligned_cols=96 Identities=11% Similarity=0.127 Sum_probs=68.5
Q ss_pred cccccHHHHHHHHHHhhcC-CCCCEEEEcCCCcHHHHHHHHHHHH--cCCcEEEEecCCCCcHHHHHHHHhCCCcEEEec
Q 021311 104 TIIVNPLTALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARH--RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 180 (314)
Q Consensus 104 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~a~~la~~--~g~~vi~~~~~~~~~~~~~~~~~~lg~~~~~~~ 180 (314)
..|+++...+..+.. -++ -.|++++|.|.+..+|.=+..++.. .+++|.++-.. +
T Consensus 137 ~~PcTp~av~~ll~~-~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~---T------------------ 194 (284)
T PRK14193 137 PLPCTPRGIVHLLRR-YDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTG---T------------------ 194 (284)
T ss_pred CCCCCHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCC---C------------------
Confidence 467777777777765 344 3699999999999999998888877 67777555421 1
Q ss_pred ChhhHHHHHHHhcCCCCCcEEEecCCCccHHHHHHhcccCCEEEEEcCCC
Q 021311 181 SQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLSQGGTMVTYGGMS 230 (314)
Q Consensus 181 ~~~~~~~i~~~~~~~g~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 230 (314)
. .+.+.+. ..|+++-++|.+.+ ---+++++|..++.+|...
T Consensus 195 --~---~l~~~~k---~ADIvV~AvGkp~~-i~~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 195 --R---DLAAHTR---RADIIVAAAGVAHL-VTADMVKPGAAVLDVGVSR 235 (284)
T ss_pred --C---CHHHHHH---hCCEEEEecCCcCc-cCHHHcCCCCEEEEccccc
Confidence 1 1222222 39999999998765 2246789999999999544
Done!