Query 021314
Match_columns 314
No_of_seqs 176 out of 1207
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 09:16:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 1.5E-68 3.3E-73 501.7 30.6 274 36-309 24-300 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 5.9E-64 1.3E-68 466.1 26.7 267 40-310 1-270 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.3E-51 2.8E-56 377.5 21.0 235 39-310 1-239 (281)
4 PRK15381 pathogenicity island 100.0 3.2E-51 6.9E-56 387.2 22.9 220 35-311 138-361 (408)
5 cd01846 fatty_acyltransferase_ 100.0 6.3E-46 1.4E-50 337.5 21.4 229 41-309 1-232 (270)
6 COG3240 Phospholipase/lecithin 100.0 2.6E-30 5.7E-35 236.3 13.0 256 32-308 22-288 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 5.4E-20 1.2E-24 161.8 13.8 205 42-300 1-218 (234)
8 cd01832 SGNH_hydrolase_like_1 98.5 1.8E-06 3.9E-11 73.4 12.2 155 41-287 1-156 (185)
9 cd01839 SGNH_arylesterase_like 98.5 3.9E-06 8.4E-11 73.1 13.6 155 81-287 20-180 (208)
10 cd01823 SEST_like SEST_like. A 98.4 8.5E-06 1.8E-10 73.3 13.3 192 41-287 2-216 (259)
11 cd01836 FeeA_FeeB_like SGNH_hy 98.3 1.2E-05 2.6E-10 68.8 12.4 95 169-287 67-162 (191)
12 cd04501 SGNH_hydrolase_like_4 98.3 3.1E-05 6.7E-10 65.8 14.2 93 170-290 60-152 (183)
13 cd01844 SGNH_hydrolase_like_6 98.2 7.3E-05 1.6E-09 63.4 14.2 147 41-286 1-148 (177)
14 cd01838 Isoamyl_acetate_hydrol 98.2 3.9E-05 8.4E-10 65.6 12.6 104 169-288 63-168 (199)
15 cd01827 sialate_O-acetylestera 98.1 5.2E-05 1.1E-09 64.7 11.8 138 86-286 20-158 (188)
16 cd01834 SGNH_hydrolase_like_2 98.1 9E-05 1.9E-09 62.9 13.3 100 171-292 63-163 (191)
17 PF13472 Lipase_GDSL_2: GDSL-l 98.1 8.6E-05 1.9E-09 61.6 12.7 93 171-288 63-155 (179)
18 cd04506 SGNH_hydrolase_YpmR_li 98.1 0.00011 2.5E-09 63.5 13.5 106 169-288 68-175 (204)
19 cd01821 Rhamnogalacturan_acety 98.0 0.00014 3.1E-09 62.7 13.4 96 170-291 66-161 (198)
20 cd01830 XynE_like SGNH_hydrola 98.0 0.00013 2.9E-09 63.3 12.7 57 171-234 76-132 (204)
21 cd01824 Phospholipase_B_like P 97.9 0.00068 1.5E-08 62.4 16.2 217 33-279 4-239 (288)
22 PRK10528 multifunctional acyl- 97.9 0.00016 3.5E-09 62.3 11.3 106 39-227 10-115 (191)
23 cd01825 SGNH_hydrolase_peri1 S 97.8 0.00019 4.2E-09 60.9 10.3 91 171-288 58-149 (189)
24 cd01835 SGNH_hydrolase_like_3 97.7 0.0012 2.6E-08 56.5 14.1 93 169-288 69-161 (193)
25 cd01822 Lysophospholipase_L1_l 97.7 0.00071 1.5E-08 56.8 12.0 44 171-229 66-109 (177)
26 cd01831 Endoglucanase_E_like E 97.5 0.0029 6.3E-08 53.0 12.6 47 171-229 57-104 (169)
27 cd01833 XynB_like SGNH_hydrola 96.7 0.014 2.9E-07 48.1 9.1 91 169-288 40-131 (157)
28 cd01829 SGNH_hydrolase_peri2 S 96.6 0.016 3.4E-07 49.7 9.6 95 171-288 61-155 (200)
29 PF14606 Lipase_GDSL_3: GDSL-l 96.5 0.045 9.8E-07 46.6 11.4 159 40-299 2-167 (178)
30 cd01841 NnaC_like NnaC (CMP-Ne 96.5 0.012 2.5E-07 49.4 7.4 89 171-288 53-142 (174)
31 cd04502 SGNH_hydrolase_like_7 96.1 0.11 2.3E-06 43.4 11.2 87 171-289 52-139 (171)
32 cd01820 PAF_acetylesterase_lik 96.0 0.05 1.1E-06 47.4 9.3 87 170-287 90-177 (214)
33 cd01828 sialate_O-acetylestera 96.0 0.032 6.9E-07 46.5 7.6 86 170-288 49-136 (169)
34 cd00229 SGNH_hydrolase SGNH_hy 95.8 0.064 1.4E-06 43.7 8.6 96 168-289 64-160 (187)
35 KOG3670 Phospholipase [Lipid t 95.7 0.12 2.6E-06 48.9 10.7 85 119-227 150-236 (397)
36 COG2755 TesA Lysophospholipase 94.6 0.33 7.2E-06 42.0 9.9 14 170-183 78-91 (216)
37 cd01826 acyloxyacyl_hydrolase_ 93.4 0.56 1.2E-05 43.3 9.0 55 171-232 124-180 (305)
38 KOG3035 Isoamyl acetate-hydrol 90.8 1.3 2.8E-05 38.8 7.6 106 170-290 69-179 (245)
39 PF07172 GRP: Glycine rich pro 89.6 0.5 1.1E-05 36.0 3.7 22 1-24 1-22 (95)
40 cd01840 SGNH_hydrolase_yrhL_li 84.9 3.7 8.1E-05 33.4 6.8 14 169-182 50-63 (150)
41 COG3240 Phospholipase/lecithin 81.0 1.9 4.2E-05 40.7 3.9 69 168-240 97-165 (370)
42 COG2845 Uncharacterized protei 76.7 15 0.00032 34.3 8.1 92 171-288 179-273 (354)
43 PF02633 Creatininase: Creatin 75.8 12 0.00026 33.1 7.4 84 174-290 61-145 (237)
44 PLN02757 sirohydrochlorine fer 66.9 22 0.00048 29.4 6.5 81 209-310 60-150 (154)
45 PF15240 Pro-rich: Proline-ric 62.2 6.3 0.00014 33.4 2.4 42 10-54 2-45 (179)
46 PRK13717 conjugal transfer pro 57.5 24 0.00053 28.1 4.8 28 248-275 70-97 (128)
47 TIGR02744 TrbI_Ftype type-F co 52.3 34 0.00073 26.8 4.7 30 248-277 57-86 (112)
48 PF08029 HisG_C: HisG, C-termi 49.2 15 0.00032 26.6 2.2 21 209-229 52-72 (75)
49 cd03416 CbiX_SirB_N Sirohydroc 47.0 48 0.001 24.8 4.9 52 209-281 46-98 (101)
50 TIGR03455 HisG_C-term ATP phos 46.1 25 0.00055 26.9 3.2 23 207-229 74-96 (100)
51 PF08885 GSCFA: GSCFA family; 44.3 71 0.0015 28.8 6.3 120 168-296 100-232 (251)
52 COG1209 RfbA dTDP-glucose pyro 42.6 1.1E+02 0.0024 28.0 7.2 82 210-302 35-148 (286)
53 COG0646 MetH Methionine syntha 41.3 40 0.00086 31.1 4.2 108 202-309 138-298 (311)
54 cd04824 eu_ALAD_PBGS_cysteine_ 40.6 33 0.00073 31.8 3.6 65 204-282 48-114 (320)
55 KOG4079 Putative mitochondrial 39.1 14 0.00031 29.8 0.9 34 279-312 113-147 (169)
56 PRK09283 delta-aminolevulinic 39.1 50 0.0011 30.8 4.5 63 204-282 56-119 (323)
57 PF01903 CbiX: CbiX; InterPro 38.8 22 0.00047 26.9 1.8 53 209-282 39-92 (105)
58 PRK13384 delta-aminolevulinic 37.2 1.1E+02 0.0023 28.6 6.3 63 204-282 58-121 (322)
59 COG0113 HemB Delta-aminolevuli 37.2 64 0.0014 29.9 4.8 67 203-282 57-123 (330)
60 cd04823 ALAD_PBGS_aspartate_ri 34.8 1.3E+02 0.0029 28.0 6.5 64 204-282 51-116 (320)
61 cd04236 AAK_NAGS-Urea AAK_NAGS 34.3 1.3E+02 0.0029 27.4 6.5 45 169-231 34-78 (271)
62 PF02384 N6_Mtase: N-6 DNA Met 34.1 12 0.00025 34.5 -0.4 56 254-312 6-61 (311)
63 PF09677 TrbI_Ftype: Type-F co 33.5 95 0.0021 24.2 4.7 27 249-275 57-83 (111)
64 PLN00115 pollen allergen group 31.2 40 0.00086 26.7 2.2 18 1-20 1-18 (118)
65 PRK11274 glcF glycolate oxidas 30.9 3.1E+02 0.0068 26.1 8.9 37 274-311 300-347 (407)
66 PRK06520 5-methyltetrahydropte 29.5 86 0.0019 29.8 4.7 35 197-232 160-194 (368)
67 cd00384 ALAD_PBGS Porphobilino 29.4 1.5E+02 0.0033 27.6 5.9 28 204-231 48-75 (314)
68 COG3354 FlaG Putative archaeal 28.5 38 0.00082 27.7 1.7 43 1-55 1-43 (154)
69 PRK06233 hypothetical protein; 28.4 93 0.002 29.7 4.7 32 197-228 161-192 (372)
70 PF00490 ALAD: Delta-aminolevu 27.4 1.8E+02 0.004 27.2 6.1 64 205-282 55-119 (324)
71 cd03411 Ferrochelatase_N Ferro 27.0 69 0.0015 26.4 3.1 25 209-233 101-125 (159)
72 cd00419 Ferrochelatase_C Ferro 26.6 2.3E+02 0.005 22.7 6.0 37 209-257 79-115 (135)
73 cd03412 CbiK_N Anaerobic cobal 25.3 75 0.0016 25.2 2.9 23 207-229 56-78 (127)
74 PRK09121 5-methyltetrahydropte 24.7 1.2E+02 0.0026 28.5 4.7 55 197-263 146-200 (339)
75 KOG4175 Tryptophan synthase al 23.8 2.9E+02 0.0063 24.2 6.3 23 211-233 114-136 (268)
76 cd03311 CIMS_C_terminal_like C 23.6 3.3E+02 0.0071 25.2 7.4 38 197-235 145-182 (332)
77 PF11599 AviRa: RRNA methyltra 22.6 28 0.0006 30.8 -0.1 8 303-310 57-64 (246)
78 CHL00202 argB acetylglutamate 22.5 3.6E+02 0.0078 24.5 7.2 63 143-233 6-68 (284)
79 COG0276 HemH Protoheme ferro-l 21.8 2.5E+02 0.0054 26.3 6.0 24 209-232 104-127 (320)
80 PLN02825 amino-acid N-acetyltr 21.7 7E+02 0.015 25.1 9.5 93 145-266 2-104 (515)
81 PF08282 Hydrolase_3: haloacid 20.8 39 0.00084 29.0 0.5 16 38-53 201-216 (254)
82 cd03409 Chelatase_Class_II Cla 20.8 1.3E+02 0.0028 22.1 3.4 24 209-232 47-70 (101)
83 cd03413 CbiK_C Anaerobic cobal 20.5 1.1E+02 0.0023 23.4 2.9 19 209-227 44-62 (103)
84 PRK03669 mannosyl-3-phosphogly 20.5 48 0.001 29.8 1.0 17 38-54 205-221 (271)
85 COG1402 Uncharacterized protei 20.4 1.3E+02 0.0029 27.1 3.8 25 204-228 87-111 (250)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=1.5e-68 Score=501.74 Aligned_cols=274 Identities=45% Similarity=0.825 Sum_probs=238.9
Q ss_pred cCCccEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCc
Q 021314 36 QNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDL 115 (314)
Q Consensus 36 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~ 115 (314)
...+++|||||||++|+||++++.+..++++||||++||+++||||||||++|+||||+.||+++++|||+++..++.++
T Consensus 24 ~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~ 103 (351)
T PLN03156 24 CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDF 103 (351)
T ss_pred cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhh
Confidence 45689999999999999999877665577899999999987799999999999999999999966899999876556788
Q ss_pred cccceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCcc
Q 021314 116 LHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQ 195 (314)
Q Consensus 116 ~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~ 195 (314)
.+|+|||+||+++++.+......+++..||++|.++++++....|...+++..+++||+||||+|||+..|+..+.....
T Consensus 104 ~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~ 183 (351)
T PLN03156 104 ATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQ 183 (351)
T ss_pred cccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcccccccc
Confidence 99999999999998766433346789999999999988877666665566778999999999999998755432222233
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCcccccc--CCccchHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021314 196 YTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQ--DQTACVESYNKVAASLNSKIREKLAILRRTI 273 (314)
Q Consensus 196 ~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~--~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~ 273 (314)
.+++++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+... ...+|.+.+|++++.||++|++++++|++++
T Consensus 184 ~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~ 263 (351)
T PLN03156 184 YTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKEL 263 (351)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46788999999999999999999999999999999999999976532 2457999999999999999999999999999
Q ss_pred -CCEEEEEeccHHHHHHHhCcccCCCcccCccccCCC
Q 021314 274 -GIKAAYIDCYDIILDAVNKPKKYGQYFASQAVLALK 309 (314)
Q Consensus 274 -g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g 309 (314)
|++|+++|+|.++.++++||++|||++++++|||.|
T Consensus 264 pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g 300 (351)
T PLN03156 264 PGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATG 300 (351)
T ss_pred CCCeEEEEehHHHHHHHHhCccccCcccCCccccCCC
Confidence 999999999999999999999999999999999865
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=5.9e-64 Score=466.14 Aligned_cols=267 Identities=47% Similarity=0.779 Sum_probs=231.9
Q ss_pred cEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccc
Q 021314 40 TFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGV 119 (314)
Q Consensus 40 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~ 119 (314)
++||+||||++|+||..++.+..+++.||||++||++ |+||||||++|+||||+.||++..+|+|+.+.. +.++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 4799999999999999877654446799999999985 999999999999999999999744788876532 25678899
Q ss_pred eecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHH
Q 021314 120 SFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVE 199 (314)
Q Consensus 120 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~ 199 (314)
|||+|||++.+.+.....+++|..||++|++++++++...|++++.+..+++||+||||+|||+..+..... ...+..
T Consensus 79 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~--~~~~~~ 156 (315)
T cd01837 79 NFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPT--RQYEVE 156 (315)
T ss_pred eecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCcc--ccCCHH
Confidence 999999999876543335789999999999999887777777667778899999999999999886643211 024577
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCcccccc--CCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 021314 200 QYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQ--DQTACVESYNKVAASLNSKIREKLAILRRTI-GIK 276 (314)
Q Consensus 200 ~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~--~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~ 276 (314)
++++.+++++.++|++||++|||+|+|+|+||+||+|.++... ...+|.+.+|++++.||.+|+++|++|++++ +++
T Consensus 157 ~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~ 236 (315)
T cd01837 157 AYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAK 236 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 8999999999999999999999999999999999999987654 2458999999999999999999999999999 999
Q ss_pred EEEEeccHHHHHHHhCcccCCCcccCccccCCCC
Q 021314 277 AAYIDCYDIILDAVNKPKKYGQYFASQAVLALKQ 310 (314)
Q Consensus 277 i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g~ 310 (314)
|+++|+|.+++++++||++|||++++++||+.|.
T Consensus 237 i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~ 270 (315)
T cd01837 237 FVYADIYNALLDLIQNPAKYGFENTLKACCGTGG 270 (315)
T ss_pred EEEEehhHHHHHHHhChhhcCCcCCCcCccCCCC
Confidence 9999999999999999999999999999999763
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.3e-51 Score=377.51 Aligned_cols=235 Identities=18% Similarity=0.229 Sum_probs=193.2
Q ss_pred ccEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCcccc
Q 021314 39 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHG 118 (314)
Q Consensus 39 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g 118 (314)
|++||||||||+|+||++++. ++ ++|+||||||++++|++++.+|++ .+ +++ ...+..+|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~-~~---~~~--~~~~~~~G 60 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYG-LT---TGT--ATPTTPGG 60 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcC-CC---cCc--CcccCCCC
Confidence 689999999999999987652 11 128999999999999999999985 22 221 23466789
Q ss_pred ceecccCccCCCCCCCc---ccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCc-cCc
Q 021314 119 VSFASAGSGYDDLTANL---SSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPT-RSR 194 (314)
Q Consensus 119 ~NfA~gGA~~~~~~~~~---~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~-~~~ 194 (314)
+|||+|||++.+.+... ...++|.+||++|++.+. ...+++||+||||+|||...+..... ...
T Consensus 61 ~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 128 (281)
T cd01847 61 TNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALTTATTT 128 (281)
T ss_pred ceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhccccccc
Confidence 99999999998754321 246789999999987542 13689999999999999976543211 011
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 021314 195 QYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIG 274 (314)
Q Consensus 195 ~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g 274 (314)
..+..++++.+++++..+|++||++|||+|+|+++||+||+|.++... ..|.+.+|++++.||++|+++|++|+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~--~~~~~~~n~~~~~~N~~L~~~l~~l~~~-- 204 (281)
T cd01847 129 QAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP--AAAAALASALSQTYNQTLQSGLNQLGAN-- 204 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc--chhHHHHHHHHHHHHHHHHHHHHhccCC--
Confidence 234668899999999999999999999999999999999999987653 3688999999999999999999988653
Q ss_pred CEEEEEeccHHHHHHHhCcccCCCcccCccccCCCC
Q 021314 275 IKAAYIDCYDIILDAVNKPKKYGQYFASQAVLALKQ 310 (314)
Q Consensus 275 ~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g~ 310 (314)
+|+++|+|.+++++++||++|||++++++||+.+.
T Consensus 205 -~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~ 239 (281)
T cd01847 205 -NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTS 239 (281)
T ss_pred -eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCC
Confidence 89999999999999999999999999999999764
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=3.2e-51 Score=387.18 Aligned_cols=220 Identities=22% Similarity=0.315 Sum_probs=185.0
Q ss_pred ccCCccEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCC
Q 021314 35 AQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKID 114 (314)
Q Consensus 35 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~ 114 (314)
+...|++||+|||||+|+||+.++.+. ..+||||.+| +||||||++|+|||| .|||++.
T Consensus 138 ~~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA--------~~pyl~~------ 196 (408)
T PRK15381 138 SLGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS--------SPHFLGK------ 196 (408)
T ss_pred ccCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec--------cccccCC------
Confidence 457899999999999999887665443 4589999876 799999999999998 2456641
Q ss_pred ccccceecccCccCCCCCCC--c-ccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCc
Q 021314 115 LLHGVSFASAGSGYDDLTAN--L-SSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPT 191 (314)
Q Consensus 115 ~~~g~NfA~gGA~~~~~~~~--~-~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~ 191 (314)
+|+|||+|||++...... . ...++|..||++|+. .+++||+||+|+|||+. +
T Consensus 197 --~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~~-~----- 251 (408)
T PRK15381 197 --EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYMT-L----- 251 (408)
T ss_pred --CCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHHH-h-----
Confidence 589999999998632110 0 124689999998543 16799999999999973 3
Q ss_pred cCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 021314 192 RSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRR 271 (314)
Q Consensus 192 ~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~ 271 (314)
..++++.+++++.++|++||++|||+|+|+|+||+||+|..+... ..+.+|.+++.||++|+++|++|++
T Consensus 252 ------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~~----~~~~~N~~a~~fN~~L~~~L~~L~~ 321 (408)
T PRK15381 252 ------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHSD----EKRKLKDESIAHNALLKTNVEELKE 321 (408)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhccC----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 124677899999999999999999999999999999999987432 3588999999999999999999999
Q ss_pred hc-CCEEEEEeccHHHHHHHhCcccCCCcccCccccCCCCC
Q 021314 272 TI-GIKAAYIDCYDIILDAVNKPKKYGQYFASQAVLALKQV 311 (314)
Q Consensus 272 ~~-g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g~~ 311 (314)
++ |++|+++|+|.++.++++||++|||++++. ||+.|.+
T Consensus 322 ~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~ 361 (408)
T PRK15381 322 KYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYV 361 (408)
T ss_pred hCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCcc
Confidence 99 999999999999999999999999999886 9998854
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=6.3e-46 Score=337.52 Aligned_cols=229 Identities=23% Similarity=0.391 Sum_probs=188.6
Q ss_pred EEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccce
Q 021314 41 FMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVS 120 (314)
Q Consensus 41 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~N 120 (314)
++|+|||||+|+||..++... ..+|.+..| |+||||||++|+|+|++.+|++ . ..+|+|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~-~-------------~~~~~N 59 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLS-G-------------LKQGYN 59 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCC-c-------------cCCcce
Confidence 589999999999998755421 123333333 7899999999999999999984 1 235899
Q ss_pred ecccCccCCCCCCC--cccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCH
Q 021314 121 FASAGSGYDDLTAN--LSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTV 198 (314)
Q Consensus 121 fA~gGA~~~~~~~~--~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~ 198 (314)
||+|||++.+.... .....++..||++|+++.+. +..+++||+||+|+||+...+.. ....
T Consensus 60 ~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~------~~~~ 122 (270)
T cd01846 60 YAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL------PQNP 122 (270)
T ss_pred eEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc------cccc
Confidence 99999998765421 23467899999999886531 24578999999999999875422 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEE
Q 021314 199 EQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKA 277 (314)
Q Consensus 199 ~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i 277 (314)
..+++.+++++.+.|++|+++|+|+|+|+++||++|+|.++..... ..+.++.+++.||++|++++++|++++ +++|
T Consensus 123 ~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~--~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 200 (270)
T cd01846 123 DTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA--VAARATALTAAYNAKLAEKLAELKAQHPGVNI 200 (270)
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 4567889999999999999999999999999999999999876431 126899999999999999999999999 9999
Q ss_pred EEEeccHHHHHHHhCcccCCCcccCccccCCC
Q 021314 278 AYIDCYDIILDAVNKPKKYGQYFASQAVLALK 309 (314)
Q Consensus 278 ~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g 309 (314)
+++|+|.++.++++||++|||++++++||+.+
T Consensus 201 ~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~~ 232 (270)
T cd01846 201 LLFDTNALFNDILDNPAAYGFTNVTDPCLDYV 232 (270)
T ss_pred EEEEhHHHHHHHHhCHHhcCCCcCcchhcCCC
Confidence 99999999999999999999999999999864
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.97 E-value=2.6e-30 Score=236.31 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=178.1
Q ss_pred hhhccCCccEEEEcCCCccccCCCCCCcccCCCCCC-CCCCcCCCCCCccccC--CCCcHHHHHHHhcCCCCCCCCC---
Q 021314 32 RIAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFL-PYGKNFFNGRPTGRFT--DGRLATDFIAESFGFTNAIPAF--- 105 (314)
Q Consensus 32 ~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~-Pyg~~~~~~~~tgRfs--nG~~~~d~la~~lGl~~~~ppy--- 105 (314)
..+..++|+.++||||||||+|+....... ...| -||. . +..++. +|.+|+++.++.+|.--..+.+
T Consensus 22 ~~~~~~~~~~l~vfGDSlSDsg~~~~~a~~--~~~~~~~~~-~----~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~ 94 (370)
T COG3240 22 PAPSLAPFQRLVVFGDSLSDSGNYYRPAGH--HGDPGSYGT-I----PGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYA 94 (370)
T ss_pred CcccccccceEEEeccchhhcccccCcccc--cCCcccccc-c----cCCcccCCCceeeeccchhhhcccccccccccc
Confidence 345568999999999999999997644321 1111 1221 1 223344 4678889999888810000101
Q ss_pred -CCCCcccCCccccceecccCccCCCCC--C-CcccccCHHHHHHHHHHHHHHHhhhhch-hhHHhhhcCceEEEEcccc
Q 021314 106 -LDPTIKKIDLLHGVSFASAGSGYDDLT--A-NLSSVLSVSRQLEYLKHYKIHLGNLVGV-KKAEEIIGNSIFLLSMGTN 180 (314)
Q Consensus 106 -l~~~~~~~~~~~g~NfA~gGA~~~~~~--~-~~~~~~~l~~Qv~~f~~~~~~~~~~~G~-~~~~~~~~~sL~~v~iG~N 180 (314)
.+++........|.|||+|||++.... . ......++.+|+.+|+...... .+++ ...-....+.|+.+|.|+|
T Consensus 95 ~~~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggan 172 (370)
T COG3240 95 AADPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGAN 172 (370)
T ss_pred ccCcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcch
Confidence 112111122257999999999976544 1 1235778999999998865320 0011 1111235678999999999
Q ss_pred hhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHH
Q 021314 181 DFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNS 260 (314)
Q Consensus 181 D~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~ 260 (314)
|++..-..+ ....+.+.......+...|++|.+.|||+|+|+++|+++.+|....... -...+.+++..||.
T Consensus 173 d~~~~~~~~-----a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~---~~~~a~~~t~~~Na 244 (370)
T COG3240 173 DYLALPMLK-----AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT---EAIQASQATIAFNA 244 (370)
T ss_pred hhhcccccc-----hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc---hHHHHHHHHHHHHH
Confidence 998732211 1122233444566799999999999999999999999999999886432 22377788999999
Q ss_pred HHHHHHHHHHHhcCCEEEEEeccHHHHHHHhCcccCCCcccCccccCC
Q 021314 261 KIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGQYFASQAVLAL 308 (314)
Q Consensus 261 ~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~ 308 (314)
.|+..|+++ +.+|+.+|++.++++|+.||++|||+|++.+||..
T Consensus 245 ~L~~~L~~~----g~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~ 288 (370)
T COG3240 245 SLTSQLEQL----GGNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDA 288 (370)
T ss_pred HHHHHHHHh----cCcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCc
Confidence 999999988 68899999999999999999999999999999864
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.83 E-value=5.4e-20 Score=161.78 Aligned_cols=205 Identities=27% Similarity=0.446 Sum_probs=141.6
Q ss_pred EEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCcccccee
Q 021314 42 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSF 121 (314)
Q Consensus 42 l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~Nf 121 (314)
|++||||++|. +|+++|.+|.+.++..+.-. .. . + ....-..+.|+
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~-~~--~-~---~~~~~~~~~n~ 46 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSC-LG--A-N---QRNSGVDVSNY 46 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHC-CH--H-H---HHCTTEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhc-cc--c-c---cCCCCCCeecc
Confidence 68999999999 23578899999999887221 00 0 0 00111346899
Q ss_pred cccCccCCCCCCC-cccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHH
Q 021314 122 ASAGSGYDDLTAN-LSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQ 200 (314)
Q Consensus 122 A~gGA~~~~~~~~-~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~ 200 (314)
|++|+++...... ......+..|+...... ....+.+|++||+|+||++... .......
T Consensus 47 a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~~-------~~~~~~~ 106 (234)
T PF00657_consen 47 AISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNNR-------DSSDNNT 106 (234)
T ss_dssp E-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSCC-------SCSTTHH
T ss_pred ccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhhc-------ccchhhh
Confidence 9999996532210 01111123333322111 1235779999999999987511 1234456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCc-----eEEEeCCCCCCccCccccccC-CccchHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 021314 201 YENYLVSSMFEDIKAMKSLGAT-----RLVVVGVPPLGCMPIVKTLQD-QTACVESYNKVAASLNSKIREKLAILRRTI- 273 (314)
Q Consensus 201 ~v~~~v~~i~~~v~~L~~~GAr-----~~vV~~lpplg~~P~~~~~~~-~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~- 273 (314)
.++.+++.+.+.|++|+..|+| +++++++||++|.|....... ...|.+.+++.++.||.+|++.+.+|++++
T Consensus 107 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~ 186 (234)
T PF00657_consen 107 SVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVAAQLRKDYP 186 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred hHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHhhhcccccc
Confidence 7788999999999999999999 999999999999888665432 457999999999999999999999988764
Q ss_pred -CCEEEEEeccHHHHHH--HhCcc--cCCCcc
Q 021314 274 -GIKAAYIDCYDIILDA--VNKPK--KYGQYF 300 (314)
Q Consensus 274 -g~~i~~~D~~~~~~~i--~~nP~--~yGf~~ 300 (314)
+.+|.++|++..+.+. ..+|. .|-|-+
T Consensus 187 ~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~D 218 (234)
T PF00657_consen 187 KGANVPYFDIYSIFSDMYGIQNPENDKYMFWD 218 (234)
T ss_dssp HHCTEEEEEHHHHHHHHHHHHHGGHHHCBBSS
T ss_pred cCCceEEEEHHHHHHHhhhccCcccceeccCC
Confidence 7889999999999999 77776 555544
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.51 E-value=1.8e-06 Score=73.43 Aligned_cols=155 Identities=19% Similarity=0.191 Sum_probs=91.0
Q ss_pred EEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccce
Q 021314 41 FMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVS 120 (314)
Q Consensus 41 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~N 120 (314)
+|++||||+++--... +....+..|++.|++.+.-+ . + . ..-.|
T Consensus 1 ~i~~~GDSit~G~~~~-----------------------~~~~~~~~~~~~l~~~l~~~-~-~----------~-~~~~N 44 (185)
T cd01832 1 RYVALGDSITEGVGDP-----------------------VPDGGYRGWADRLAAALAAA-D-P----------G-IEYAN 44 (185)
T ss_pred CeeEecchhhcccCCC-----------------------CCCCccccHHHHHHHHhccc-C-C----------C-ceEee
Confidence 4889999988732210 01124578999999987541 0 0 0 12479
Q ss_pred ecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHH
Q 021314 121 FASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQ 200 (314)
Q Consensus 121 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~ 200 (314)
.+.+|++..+ .+..|+.. .. . ..-.+++|.+|.||.... ..+++
T Consensus 45 ~g~~G~~~~~---------~~~~~~~~---~~-------------~-~~~d~vii~~G~ND~~~~---------~~~~~- 88 (185)
T cd01832 45 LAVRGRRTAQ---------ILAEQLPA---AL-------------A-LRPDLVTLLAGGNDILRP---------GTDPD- 88 (185)
T ss_pred ccCCcchHHH---------HHHHHHHH---HH-------------h-cCCCEEEEeccccccccC---------CCCHH-
Confidence 9999997521 01122221 11 0 133689999999998530 12333
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceEEEeCCCCC-CccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Q 021314 201 YENYLVSSMFEDIKAMKSLGATRLVVVGVPPL-GCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAY 279 (314)
Q Consensus 201 ~v~~~v~~i~~~v~~L~~~GAr~~vV~~lppl-g~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~ 279 (314)
+..+++...|+++...+++ ++++++||. +..|. ....+...+.+|+.|++..++ -.+.+
T Consensus 89 ---~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~----------~~~~~~~~~~~n~~l~~~a~~------~~v~~ 148 (185)
T cd01832 89 ---TYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF----------RRRVRARLAAYNAVIRAVAAR------YGAVH 148 (185)
T ss_pred ---HHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh----------HHHHHHHHHHHHHHHHHHHHH------cCCEE
Confidence 3444556666666667775 777888887 32221 122344567788887766543 24778
Q ss_pred EeccHHHH
Q 021314 280 IDCYDIIL 287 (314)
Q Consensus 280 ~D~~~~~~ 287 (314)
+|++..+.
T Consensus 149 vd~~~~~~ 156 (185)
T cd01832 149 VDLWEHPE 156 (185)
T ss_pred EecccCcc
Confidence 89887653
No 9
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.47 E-value=3.9e-06 Score=73.06 Aligned_cols=155 Identities=12% Similarity=0.130 Sum_probs=84.5
Q ss_pred ccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhc
Q 021314 81 RFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVG 160 (314)
Q Consensus 81 RfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G 160 (314)
|++.+..|+..|++.|+-. . +. ..-+|.+++|.++..... .......++.+...+..
T Consensus 20 ~~~~~~~w~~~L~~~l~~~-~-~~-----------~~viN~Gv~G~tt~~~~~----~~~~~~~l~~l~~~l~~------ 76 (208)
T cd01839 20 RYPFEDRWPGVLEKALGAN-G-EN-----------VRVIEDGLPGRTTVLDDP----FFPGRNGLTYLPQALES------ 76 (208)
T ss_pred cCCcCCCCHHHHHHHHccC-C-CC-----------eEEEecCcCCcceeccCc----cccCcchHHHHHHHHHh------
Confidence 4556778999999988642 1 10 124899999987532111 00111122222222210
Q ss_pred hhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHc------CCceEEEeCCCCCCc
Q 021314 161 VKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSL------GATRLVVVGVPPLGC 234 (314)
Q Consensus 161 ~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~------GAr~~vV~~lpplg~ 234 (314)
...-++++|++|+||+...+. .+.+ .....+.+.|+++.+. +..+++++..||+..
T Consensus 77 ------~~~pd~vii~lGtND~~~~~~--------~~~~----~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~ 138 (208)
T cd01839 77 ------HSPLDLVIIMLGTNDLKSYFN--------LSAA----EIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRT 138 (208)
T ss_pred ------CCCCCEEEEeccccccccccC--------CCHH----HHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCc
Confidence 123488999999999864211 1222 2333444444444443 467788888888722
Q ss_pred cCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHH
Q 021314 235 MPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIIL 287 (314)
Q Consensus 235 ~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~ 287 (314)
.+... ..+....+...+.||+.+++..++. .+.++|.+.++.
T Consensus 139 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~------~~~~iD~~~~~~ 180 (208)
T cd01839 139 PKGSL-----AGKFAGAEEKSKGLADAYRALAEEL------GCHFFDAGSVGS 180 (208)
T ss_pred cccch-----hhhhccHHHHHHHHHHHHHHHHHHh------CCCEEcHHHHhc
Confidence 21111 1123344566777887777654432 367889877653
No 10
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.36 E-value=8.5e-06 Score=73.33 Aligned_cols=192 Identities=17% Similarity=0.116 Sum_probs=101.3
Q ss_pred EEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccce
Q 021314 41 FMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVS 120 (314)
Q Consensus 41 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~N 120 (314)
++++||||++-.-.. +++... +.. ...|. ...|++++++.|+.. + ..-.|
T Consensus 2 ~~v~iGDS~~~G~g~-----------~~~~~~-~~~-~c~rs--~~~y~~~la~~l~~~---~------------~~~~n 51 (259)
T cd01823 2 RYVALGDSYAAGPGA-----------GPLDDG-PDD-GCRRS--SNSYPTLLARALGDE---T------------LSFTD 51 (259)
T ss_pred CEEEecchhhcCCCC-----------CcccCC-CCC-CCccC--CccHHHHHHHHcCCC---C------------ceeee
Confidence 588999998754321 111100 111 23333 478999999998852 0 12389
Q ss_pred ecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcC-----Cc----
Q 021314 121 FASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLE-----PT---- 191 (314)
Q Consensus 121 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~-----~~---- 191 (314)
+|..|+++.+.... .......|.+. + ...-.+++|.||+||+....... ..
T Consensus 52 ~a~sGa~~~~~~~~--~~~~~~~~~~~-------l-----------~~~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~ 111 (259)
T cd01823 52 VACSGATTTDGIEP--QQGGIAPQAGA-------L-----------DPDTDLVTITIGGNDLGFADVVKACILTGGGSSL 111 (259)
T ss_pred eeecCccccccccc--ccCCCchhhcc-------c-----------CCCCCEEEEEECccccchHHHHHHHhhccCCCCc
Confidence 99999997554311 00111112110 0 01247999999999985432110 00
Q ss_pred ----cCccCCHHHHHHHHHHHHHHHHHHHHHc-CCceEEEeCCCCCCcc----Cccc----cccCCccchHHHHHHHHHH
Q 021314 192 ----RSRQYTVEQYENYLVSSMFEDIKAMKSL-GATRLVVVGVPPLGCM----PIVK----TLQDQTACVESYNKVAASL 258 (314)
Q Consensus 192 ----~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~~lpplg~~----P~~~----~~~~~~~c~~~~n~~~~~~ 258 (314)
...........+...+++.+.|++|.+. .--+|++++.|++--. |... ... .....+..++..+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 190 (259)
T cd01823 112 AQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPL-TPADRPELNQLVDKL 190 (259)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCC-CHHHHHHHHHHHHHH
Confidence 0000111223345556667777777654 3346899998775321 0000 000 011234566667777
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEeccHHHH
Q 021314 259 NSKIREKLAILRRTI-GIKAAYIDCYDIIL 287 (314)
Q Consensus 259 N~~L~~~l~~L~~~~-g~~i~~~D~~~~~~ 287 (314)
|..+++. .+++ ..++.++|++..+.
T Consensus 191 n~~i~~~----a~~~~~~~v~fvD~~~~f~ 216 (259)
T cd01823 191 NALIRRA----AADAGDYKVRFVDTDAPFA 216 (259)
T ss_pred HHHHHHH----HHHhCCceEEEEECCCCcC
Confidence 7666654 4444 45688999998775
No 11
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.30 E-value=1.2e-05 Score=68.80 Aligned_cols=95 Identities=19% Similarity=0.297 Sum_probs=59.6
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHH-cCCceEEEeCCCCCCccCccccccCCccc
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKS-LGATRLVVVGVPPLGCMPIVKTLQDQTAC 247 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~vV~~lpplg~~P~~~~~~~~~~c 247 (314)
.-++++|.+|+||+... ... +....++.+.++++.+ ....+|++.++||++..|.... ..
T Consensus 67 ~pd~Vii~~G~ND~~~~----------~~~----~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~-----~~ 127 (191)
T cd01836 67 RFDVAVISIGVNDVTHL----------TSI----ARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ-----PL 127 (191)
T ss_pred CCCEEEEEecccCcCCC----------CCH----HHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----HH
Confidence 33789999999998531 122 2344556666666665 3556899999999887653221 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHH
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIIL 287 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~ 287 (314)
....++..+.+|+.+++..+ ++ ..+.++|++..+.
T Consensus 128 ~~~~~~~~~~~n~~~~~~a~----~~-~~~~~id~~~~~~ 162 (191)
T cd01836 128 RWLLGRRARLLNRALERLAS----EA-PRVTLLPATGPLF 162 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHh----cC-CCeEEEecCCccc
Confidence 23345556677777666544 32 2577889988763
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.27 E-value=3.1e-05 Score=65.81 Aligned_cols=93 Identities=17% Similarity=0.240 Sum_probs=58.2
Q ss_pred CceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchH
Q 021314 170 NSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 170 ~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
-++++|.+|.||.... ...+ +....+.+.|+.+.+.|++ ++++..+|....+... +..
T Consensus 60 ~d~v~i~~G~ND~~~~----------~~~~----~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~-------~~~ 117 (183)
T cd04501 60 PAVVIIMGGTNDIIVN----------TSLE----MIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP-------QWL 117 (183)
T ss_pred CCEEEEEeccCccccC----------CCHH----HHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------hhc
Confidence 3788999999998541 1222 3445566667777778875 5556666655433211 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHH
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAV 290 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~ 290 (314)
..+.....||..+++..++ ..+.++|.++.+.+.-
T Consensus 118 ~~~~~~~~~n~~~~~~a~~------~~v~~vd~~~~~~~~~ 152 (183)
T cd04501 118 RPANKLKSLNRWLKDYARE------NGLLFLDFYSPLLDER 152 (183)
T ss_pred chHHHHHHHHHHHHHHHHH------cCCCEEechhhhhccc
Confidence 3345567788877765443 2488999999877643
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.17 E-value=7.3e-05 Score=63.40 Aligned_cols=147 Identities=13% Similarity=0.144 Sum_probs=85.3
Q ss_pred EEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccce
Q 021314 41 FMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVS 120 (314)
Q Consensus 41 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~N 120 (314)
+|++||||++.-.... +-+..|+..+++.++++ -+|
T Consensus 1 ~iv~~GDSit~G~g~~--------------------------~~~~~~~~~~~~~~~~~------------------v~N 36 (177)
T cd01844 1 PWVFYGTSISQGACAS--------------------------RPGMAWTAILARRLGLE------------------VIN 36 (177)
T ss_pred CEEEEeCchhcCcCCC--------------------------CCCCcHHHHHHHHhCCC------------------eEE
Confidence 4789999977653210 11347889999988764 279
Q ss_pred ecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHH
Q 021314 121 FASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQ 200 (314)
Q Consensus 121 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~ 200 (314)
.+++|.+... ..+. +.... ..-.+++|.+|+||....
T Consensus 37 ~g~~G~~~~~------------~~~~---~~~~~-------------~~pd~vii~~G~ND~~~~--------------- 73 (177)
T cd01844 37 LGFSGNARLE------------PEVA---ELLRD-------------VPADLYIIDCGPNIVGAE--------------- 73 (177)
T ss_pred eeecccccch------------HHHH---HHHHh-------------cCCCEEEEEeccCCCccH---------------
Confidence 9999986321 0111 11110 133789999999996320
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-ceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Q 021314 201 YENYLVSSMFEDIKAMKSLGA-TRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAY 279 (314)
Q Consensus 201 ~v~~~v~~i~~~v~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~ 279 (314)
.+..+++...+++|.+..- .+|++++.||... ..... ......++....+| +.+++++++..-++.+
T Consensus 74 --~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~~~---~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~ 141 (177)
T cd01844 74 --AMVRERLGPLVKGLRETHPDTPILLVSPRYCPD---AELTP---GRGKLTLAVRRALR----EAFEKLRADGVPNLYY 141 (177)
T ss_pred --HHHHHHHHHHHHHHHHHCcCCCEEEEecCCCCc---cccCc---chhHHHHHHHHHHH----HHHHHHHhcCCCCEEE
Confidence 0456677777778877654 4677777766422 11111 12233344344444 4444444433347899
Q ss_pred EeccHHH
Q 021314 280 IDCYDII 286 (314)
Q Consensus 280 ~D~~~~~ 286 (314)
+|.++++
T Consensus 142 id~~~~~ 148 (177)
T cd01844 142 LDGEELL 148 (177)
T ss_pred ecchhhc
Confidence 9987665
No 14
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.16 E-value=3.9e-05 Score=65.62 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=57.6
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHH--cCCceEEEeCCCCCCccCccccccCCcc
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKS--LGATRLVVVGVPPLGCMPIVKTLQDQTA 246 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~vV~~lpplg~~P~~~~~~~~~~ 246 (314)
.-.+++|++|+||....... ...+.+ ...+.+...|+++.+ .++ ++++++.||...............
T Consensus 63 ~pd~vii~~G~ND~~~~~~~-----~~~~~~----~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~~~~ 132 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQP-----QHVPLD----EYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLEDGGS 132 (199)
T ss_pred CceEEEEEecCccccCCCCC-----CcccHH----HHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhccccC
Confidence 45799999999998642110 012233 333445555555555 455 577778887653321110000001
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 247 CVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 247 c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
.....++..+.||+.+++..++. + +.++|+++.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~a~~~----~--~~~iD~~~~~~~ 168 (199)
T cd01838 133 QPGRTNELLKQYAEACVEVAEEL----G--VPVIDLWTAMQE 168 (199)
T ss_pred CccccHHHHHHHHHHHHHHHHHh----C--CcEEEHHHHHHh
Confidence 12344566778887776644432 3 778899988764
No 15
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.09 E-value=5.2e-05 Score=64.65 Aligned_cols=138 Identities=11% Similarity=0.054 Sum_probs=72.4
Q ss_pred CcHHHHHHHhcCCCCCCCCCCCCCcccCCccccceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHH
Q 021314 86 RLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAE 165 (314)
Q Consensus 86 ~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~ 165 (314)
.-|++.|++.++.+ ..-.|++.+|.++.+... .......|++ +..+
T Consensus 20 ~~~~~~l~~~l~~~----------------~~v~N~g~~G~t~~~~~~---~~~~~~~~~~---~~~~------------ 65 (188)
T cd01827 20 DSYPSPLAQMLGDG----------------YEVGNFGKSARTVLNKGD---HPYMNEERYK---NALA------------ 65 (188)
T ss_pred CchHHHHHHHhCCC----------------CeEEeccCCcceeecCCC---cCccchHHHH---Hhhc------------
Confidence 45778888877532 113699999998643211 0111122222 1110
Q ss_pred hhhcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEeCCCCCCccCccccccCC
Q 021314 166 EIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGA-TRLVVVGVPPLGCMPIVKTLQDQ 244 (314)
Q Consensus 166 ~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~ 244 (314)
..-++++|.+|+||..... ....+ ....++...|+++.+.+. .+|++.+.||......
T Consensus 66 --~~pd~Vii~~G~ND~~~~~--------~~~~~----~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~------- 124 (188)
T cd01827 66 --FNPNIVIIKLGTNDAKPQN--------WKYKD----DFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG------- 124 (188)
T ss_pred --cCCCEEEEEcccCCCCCCC--------CccHH----HHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC-------
Confidence 1237899999999985411 01122 233456666666666553 4677777776543211
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHH
Q 021314 245 TACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDII 286 (314)
Q Consensus 245 ~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~ 286 (314)
.. ...+...+.+|+.+++. .++++ +.++|.|+.+
T Consensus 125 -~~-~~~~~~~~~~~~~~~~~----a~~~~--~~~vD~~~~~ 158 (188)
T cd01827 125 -GF-INDNIIKKEIQPMIDKI----AKKLN--LKLIDLHTPL 158 (188)
T ss_pred -Cc-cchHHHHHHHHHHHHHH----HHHcC--CcEEEccccc
Confidence 01 11223345566555543 33323 5678988765
No 16
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.09 E-value=9e-05 Score=62.91 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=63.1
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHH-HcCCceEEEeCCCCCCccCccccccCCccchH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMK-SLGATRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~-~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
.+++|++|.||+...+. ....+ +....++.+.|+.+. .....+|++++.+|....+... .-..
T Consensus 63 d~v~l~~G~ND~~~~~~------~~~~~----~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------~~~~ 126 (191)
T cd01834 63 DVVSIMFGINDSFRGFD------DPVGL----EKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------PDGA 126 (191)
T ss_pred CEEEEEeecchHhhccc------ccccH----HHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC------CChH
Confidence 79999999999976321 01122 344556666777774 3344568887766654332110 0134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHHhC
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNK 292 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~~n 292 (314)
..+.....||+.|++..++ -.+.++|.++.+.+....
T Consensus 127 ~~~~~~~~~n~~l~~~a~~------~~~~~iD~~~~~~~~~~~ 163 (191)
T cd01834 127 EYNANLAAYADAVRELAAE------NGVAFVDLFTPMKEAFQK 163 (191)
T ss_pred HHHHHHHHHHHHHHHHHHH------cCCeEEecHHHHHHHHHh
Confidence 5667778888888765443 248899999999887665
No 17
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.08 E-value=8.6e-05 Score=61.57 Aligned_cols=93 Identities=24% Similarity=0.340 Sum_probs=60.2
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVES 250 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~ 250 (314)
.+++|.+|+||.... - ......+.....+.+.|+++...+ +++++.+||..-.+... +...
T Consensus 63 d~vvi~~G~ND~~~~-~---------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~-------~~~~ 123 (179)
T PF13472_consen 63 DLVVISFGTNDVLNG-D---------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP-------KQDY 123 (179)
T ss_dssp SEEEEE--HHHHCTC-T---------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-------HTTC
T ss_pred CEEEEEccccccccc-c---------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-------cchh
Confidence 689999999999762 0 122345567777888888888888 88888888766443221 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 251 YNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 251 ~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
.......+|+.+++..++ ..+.++|++..+.+
T Consensus 124 ~~~~~~~~~~~~~~~a~~------~~~~~id~~~~~~~ 155 (179)
T PF13472_consen 124 LNRRIDRYNQAIRELAKK------YGVPFIDLFDAFDD 155 (179)
T ss_dssp HHHHHHHHHHHHHHHHHH------CTEEEEEHHHHHBT
T ss_pred hhhhHHHHHHHHHHHHHH------cCCEEEECHHHHcc
Confidence 445567788777765432 25889999998664
No 18
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.06 E-value=0.00011 Score=63.48 Aligned_cols=106 Identities=14% Similarity=0.218 Sum_probs=60.6
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEeCCC-CCCccCccccccCCcc
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGAT-RLVVVGVP-PLGCMPIVKTLQDQTA 246 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr-~~vV~~lp-plg~~P~~~~~~~~~~ 246 (314)
.-.+++|.+|+||+..................-.+....++.+.|+++.+.+.+ +|++++++ |.. ....
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~~---- 138 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYFP---- 138 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----cccc----
Confidence 347899999999997643211000000011122345566777777777776543 57777653 321 1111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 247 CVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 247 c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
-....++.++.||..+++..++ ..++.++|+++.+..
T Consensus 139 ~~~~~~~~~~~~n~~~~~~a~~-----~~~v~~vd~~~~~~~ 175 (204)
T cd04506 139 NITEINDIVNDWNEASQKLASQ-----YKNAYFVPIFDLFSD 175 (204)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEehHHhhcC
Confidence 1234567788899877765442 234889999987764
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.02 E-value=0.00014 Score=62.66 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=56.3
Q ss_pred CceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchH
Q 021314 170 NSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 170 ~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
-++++|.+|.||....... ..... +....++.+.|+++.+.|++ +++++.||....+ .+.
T Consensus 66 pdlVii~~G~ND~~~~~~~-----~~~~~----~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~~---------~~~- 125 (198)
T cd01821 66 GDYVLIQFGHNDQKPKDPE-----YTEPY----TTYKEYLRRYIAEARAKGAT-PILVTPVTRRTFD---------EGG- 125 (198)
T ss_pred CCEEEEECCCCCCCCCCCC-----CCCcH----HHHHHHHHHHHHHHHHCCCe-EEEECCccccccC---------CCC-
Confidence 4899999999998542100 01122 34556677777777788886 4455544421110 010
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHHh
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVN 291 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~~ 291 (314)
..+.....||+.+++..++. + +.++|+++.+.+..+
T Consensus 126 ~~~~~~~~~~~~~~~~a~~~----~--~~~vD~~~~~~~~~~ 161 (198)
T cd01821 126 KVEDTLGDYPAAMRELAAEE----G--VPLIDLNAASRALYE 161 (198)
T ss_pred cccccchhHHHHHHHHHHHh----C--CCEEecHHHHHHHHH
Confidence 12233456777776654432 3 678999999887655
No 20
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.99 E-value=0.00013 Score=63.29 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=36.2
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCc
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGC 234 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~ 234 (314)
.+++|++|+||+...... +. .....+ +.....+...++++.+.|+ ++++.++||..-
T Consensus 76 ~~vii~~G~ND~~~~~~~-~~-~~~~~~----~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~ 132 (204)
T cd01830 76 RTVIILEGVNDIGASGTD-FA-AAPVTA----EELIAGYRQLIRRAHARGI-KVIGATITPFEG 132 (204)
T ss_pred CEEEEecccccccccccc-cc-cCCCCH----HHHHHHHHHHHHHHHHCCC-eEEEecCCCCCC
Confidence 578899999998642211 00 001122 3456677777888888887 477788888543
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.90 E-value=0.00068 Score=62.38 Aligned_cols=217 Identities=11% Similarity=0.090 Sum_probs=109.3
Q ss_pred hhccCCccEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCccc
Q 021314 33 IAAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKK 112 (314)
Q Consensus 33 ~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~ 112 (314)
...+..++-|-.+|||++= |+...-.........--|..|..+ -.+.+.+=.+.+.+|-+. +- .+.-|.......
T Consensus 4 ~lrp~DI~viaA~GDSlta-g~ga~~~~~~~~~~e~rG~s~~~G-g~~~~~~~~Tlpnil~~f-np--~l~G~s~~~~~~ 78 (288)
T cd01824 4 RLRPGDIKVIAALGDSLTA-GNGAGSANNLDLLTEYRGLSWSIG-GDSTLRGLTTLPNILREF-NP--SLYGYSVGTGDE 78 (288)
T ss_pred ccccccCeEEeeccccccc-cCCCCCCCccccccccCCceEecC-CcccccccccHHHHHHHh-CC--CcccccCCCCCC
Confidence 4567789999999999974 332210000000000014444322 122233335666666543 31 111111000000
Q ss_pred CCccccceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhh-cCceEEEEcccchhhhhhhcCCc
Q 021314 113 IDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEII-GNSIFLLSMGTNDFLQNYYLEPT 191 (314)
Q Consensus 113 ~~~~~g~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~-~~sL~~v~iG~ND~~~~~~~~~~ 191 (314)
..-....|+|+.|+++. .|..|++...+..++ . + ..... .=.|++|+||+||+.... ..+
T Consensus 79 ~~~~~~~N~av~Ga~s~----------dL~~qa~~lv~r~~~---~--~--~i~~~~dwklVtI~IG~ND~c~~~-~~~- 139 (288)
T cd01824 79 TLPDSGFNVAEPGAKSE----------DLPQQARLLVRRMKK---D--P--RVDFKNDWKLITIFIGGNDLCSLC-EDA- 139 (288)
T ss_pred CCcccceeecccCcchh----------hHHHHHHHHHHHHhh---c--c--ccccccCCcEEEEEecchhHhhhc-ccc-
Confidence 11224689999999853 466787755443221 0 0 00111 124799999999997622 111
Q ss_pred cCccCCHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEeCCCCCCccCccccccC------Cccc--h--------HHHHHH
Q 021314 192 RSRQYTVEQYENYLVSSMFEDIKAMKSLGAT-RLVVVGVPPLGCMPIVKTLQD------QTAC--V--------ESYNKV 254 (314)
Q Consensus 192 ~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr-~~vV~~lpplg~~P~~~~~~~------~~~c--~--------~~~n~~ 254 (314)
.... .....+++.+.++.|.+..-| .++++++|++...+....... ...| . +.+.++
T Consensus 140 --~~~~----~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~ 213 (288)
T cd01824 140 --NPGS----PQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKF 213 (288)
T ss_pred --cCcC----HHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHH
Confidence 1122 334556778888888887755 467777777654433221000 1123 2 366677
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCEEEE
Q 021314 255 AASLNSKIREKLAILRRTI-GIKAAY 279 (314)
Q Consensus 255 ~~~~N~~L~~~l~~L~~~~-g~~i~~ 279 (314)
.+.|++.+++..+.-+-+. +..+++
T Consensus 214 ~~~y~~~~~eia~~~~~~~~~f~vv~ 239 (288)
T cd01824 214 YKEYQNEVEEIVESGEFDREDFAVVV 239 (288)
T ss_pred HHHHHHHHHHHHhcccccccCccEEe
Confidence 8889888877665432223 455555
No 22
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.90 E-value=0.00016 Score=62.28 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=64.9
Q ss_pred ccEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCcccc
Q 021314 39 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHG 118 (314)
Q Consensus 39 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g 118 (314)
-.+|++||||++.... ...+..|+..|++.+... . .-
T Consensus 10 ~~~iv~~GDSit~G~~---------------------------~~~~~~w~~~l~~~l~~~-~---------------~v 46 (191)
T PRK10528 10 ADTLLILGDSLSAGYR---------------------------MPASAAWPALLNDKWQSK-T---------------SV 46 (191)
T ss_pred CCEEEEEeCchhhcCC---------------------------CCccCchHHHHHHHHhhC-C---------------CE
Confidence 5799999999865421 012346888898887542 0 03
Q ss_pred ceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCH
Q 021314 119 VSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTV 198 (314)
Q Consensus 119 ~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~ 198 (314)
+|.+++|.++. .+..+++ +... ...-++++|.+|+||.... .+.
T Consensus 47 ~N~Gi~G~tt~----------~~~~rl~---~~l~-------------~~~pd~Vii~~GtND~~~~----------~~~ 90 (191)
T PRK10528 47 VNASISGDTSQ----------QGLARLP---ALLK-------------QHQPRWVLVELGGNDGLRG----------FPP 90 (191)
T ss_pred EecCcCcccHH----------HHHHHHH---HHHH-------------hcCCCEEEEEeccCcCccC----------CCH
Confidence 78888887642 1222222 2111 0123789999999997431 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEEEe
Q 021314 199 EQYENYLVSSMFEDIKAMKSLGATRLVVV 227 (314)
Q Consensus 199 ~~~v~~~v~~i~~~v~~L~~~GAr~~vV~ 227 (314)
+...+++...++++.+.|++.+++.
T Consensus 91 ----~~~~~~l~~li~~~~~~~~~~ill~ 115 (191)
T PRK10528 91 ----QQTEQTLRQIIQDVKAANAQPLLMQ 115 (191)
T ss_pred ----HHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 3455667777777878898877763
No 23
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.81 E-value=0.00019 Score=60.95 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=52.6
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHc-CCceEEEeCCCCCCccCccccccCCccchH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSL-GATRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
++++|.+|+||..... ... +...+++...|+++.+. ...+|++++.||....+.. +..
T Consensus 58 d~Vii~~G~ND~~~~~---------~~~----~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~--------~~~ 116 (189)
T cd01825 58 DLVILSYGTNEAFNKQ---------LNA----SEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA--------GRW 116 (189)
T ss_pred CEEEEECCCcccccCC---------CCH----HHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC--------CCc
Confidence 6889999999974310 122 24455666666666663 4556888887765332210 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
..+...+.+|..+++..+ +++ +.++|.++.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~a~----~~~--v~~vd~~~~~~~ 149 (189)
T cd01825 117 RTPPGLDAVIAAQRRVAK----EEG--IAFWDLYAAMGG 149 (189)
T ss_pred ccCCcHHHHHHHHHHHHH----HcC--CeEEeHHHHhCC
Confidence 112234556666555433 324 788999988754
No 24
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.73 E-value=0.0012 Score=56.48 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=50.4
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccch
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACV 248 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~ 248 (314)
.-.+++|.+|.||........ .....++|.. .+...++++ +.++ +++++++||....+ .
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~~----~~~~~~~~~~----~~~~ii~~~-~~~~-~vi~~~~~p~~~~~-----------~ 127 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRKR----PQLSARAFLF----GLNQLLEEA-KRLV-PVLVVGPTPVDEAK-----------M 127 (193)
T ss_pred CCCEEEEEecCcccccccCcc----cccCHHHHHH----HHHHHHHHH-hcCC-cEEEEeCCCccccc-----------c
Confidence 348999999999996531100 1123333322 222222222 2344 47888877764211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 249 ESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 249 ~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
...+...+.+|+.+++..++ ..+.++|++..+.+
T Consensus 128 ~~~~~~~~~~n~~~~~~a~~------~~~~~vd~~~~~~~ 161 (193)
T cd01835 128 PYSNRRIARLETAFAEVCLR------RDVPFLDTFTPLLN 161 (193)
T ss_pred chhhHHHHHHHHHHHHHHHH------cCCCeEeCccchhc
Confidence 12345566777777665443 24678899887664
No 25
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.70 E-value=0.00071 Score=56.77 Aligned_cols=44 Identities=23% Similarity=0.418 Sum_probs=29.3
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCC
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGV 229 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~l 229 (314)
.+++|.+|+||.... .+.+ ....++.+.++++.+.|++ ++++++
T Consensus 66 d~v~i~~G~ND~~~~----------~~~~----~~~~~l~~li~~~~~~~~~-vil~~~ 109 (177)
T cd01822 66 DLVILELGGNDGLRG----------IPPD----QTRANLRQMIETAQARGAP-VLLVGM 109 (177)
T ss_pred CEEEEeccCcccccC----------CCHH----HHHHHHHHHHHHHHHCCCe-EEEEec
Confidence 689999999997431 1222 3455677777777777876 555554
No 26
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.47 E-value=0.0029 Score=53.05 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=28.3
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEeCC
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGA-TRLVVVGV 229 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~~l 229 (314)
.+++|.+|+||+.... .... .....++.+.|+++.+..- .+|++...
T Consensus 57 d~vii~~G~ND~~~~~--------~~~~----~~~~~~~~~li~~i~~~~p~~~i~~~~~ 104 (169)
T cd01831 57 DLVVINLGTNDFSTGN--------NPPG----EDFTNAYVEFIEELRKRYPDAPIVLMLG 104 (169)
T ss_pred CEEEEECCcCCCCCCC--------CCCH----HHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 6799999999985311 0122 3455566666777766553 34655543
No 27
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.68 E-value=0.014 Score=48.09 Aligned_cols=91 Identities=22% Similarity=0.243 Sum_probs=61.1
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEeCCCCCCccCccccccCCccc
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGA-TRLVVVGVPPLGCMPIVKTLQDQTAC 247 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~c 247 (314)
.-++++|.+|+||.... .+. +....++.+.|+++.+..- -+|++.++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~----------~~~----~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN----------RDP----DTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------- 94 (157)
T ss_pred CCCEEEEeccCcccccC----------CCH----HHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc-----------
Confidence 33789999999998542 122 2445566667777766532 246666666643221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
.+.....||+.+++.+++.+.. +..+.++|+++.+.+
T Consensus 95 ---~~~~~~~~n~~l~~~~~~~~~~-~~~v~~vd~~~~~~~ 131 (157)
T cd01833 95 ---GNARIAEYNAAIPGVVADLRTA-GSPVVLVDMSTGYTT 131 (157)
T ss_pred ---hhHHHHHHHHHHHHHHHHHhcC-CCCEEEEecCCCCCC
Confidence 1466788999999988876544 567999999988753
No 28
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.65 E-value=0.016 Score=49.73 Aligned_cols=95 Identities=19% Similarity=0.298 Sum_probs=57.4
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVES 250 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~ 250 (314)
++++|.+|+||+..... ... ......+++.+....++...++++.+.|++ +++++.||+.- ..
T Consensus 61 d~vii~~G~ND~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~--------------~~ 123 (200)
T cd01829 61 DVVVVFLGANDRQDIRD-GDG-YLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS--------------PK 123 (200)
T ss_pred CEEEEEecCCCCccccC-CCc-eeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC--------------hh
Confidence 68888999999864221 100 001112334555666777777777777776 77788887642 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 251 YNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 251 ~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
.+.....+|..+++..++ ..+.++|+++.+.+
T Consensus 124 ~~~~~~~~~~~~~~~a~~------~~~~~id~~~~~~~ 155 (200)
T cd01829 124 LSADMVYLNSLYREEVAK------AGGEFVDVWDGFVD 155 (200)
T ss_pred HhHHHHHHHHHHHHHHHH------cCCEEEEhhHhhcC
Confidence 234456677766654432 23789999887643
No 29
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.54 E-value=0.045 Score=46.58 Aligned_cols=159 Identities=17% Similarity=0.245 Sum_probs=80.4
Q ss_pred cEEEEcCCCccccCCCCCCcccCCCCCCCCCCcCCCCCCccccCCCCcHHHHHHHhcCCCCCCCCCCCCCcccCCccccc
Q 021314 40 TFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGV 119 (314)
Q Consensus 40 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~~~~tgRfsnG~~~~d~la~~lGl~~~~ppyl~~~~~~~~~~~g~ 119 (314)
+.+++.|+|.+-.+.. -+-|..|+-.++..+|++ -+
T Consensus 2 k~~v~YGsSItqG~~A--------------------------srpg~~~~~~~aR~l~~~------------------~i 37 (178)
T PF14606_consen 2 KRWVAYGSSITQGACA--------------------------SRPGMAYPAILARRLGLD------------------VI 37 (178)
T ss_dssp -EEEEEE-TT-TTTT---------------------------SSGGGSHHHHHHHHHT-E------------------EE
T ss_pred CeEEEECChhhcCCCC--------------------------CCCcccHHHHHHHHcCCC------------------eE
Confidence 5688889886654441 123578999999999985 28
Q ss_pred eecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHH
Q 021314 120 SFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVE 199 (314)
Q Consensus 120 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~ 199 (314)
|.+++|.+- ++..+..+... .+.++|++..|.| . .+ ..
T Consensus 38 NLGfsG~~~------------le~~~a~~ia~----------------~~a~~~~ld~~~N------~-~~-----~~-- 75 (178)
T PF14606_consen 38 NLGFSGNGK------------LEPEVADLIAE----------------IDADLIVLDCGPN------M-SP-----EE-- 75 (178)
T ss_dssp EEE-TCCCS--------------HHHHHHHHH----------------S--SEEEEEESHH------C-CT-----TT--
T ss_pred eeeecCccc------------cCHHHHHHHhc----------------CCCCEEEEEeecC------C-CH-----HH--
Confidence 999999873 23344444331 2448999999999 1 11 12
Q ss_pred HHHHHHHHHHHHHHHHHHHc-CCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEE
Q 021314 200 QYENYLVSSMFEDIKAMKSL-GATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAA 278 (314)
Q Consensus 200 ~~v~~~v~~i~~~v~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~ 278 (314)
+..++...|++|-+. --.-|+++...+ .... . .........+.+|+.+++.+++|+++-.-++.
T Consensus 76 -----~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~-~-------~~~~~~~~~~~~~~~~r~~v~~l~~~g~~nl~ 140 (178)
T PF14606_consen 76 -----FRERLDGFVKTIREAHPDTPILLVSPIP--YPAG-Y-------FDNSRGETVEEFREALREAVEQLRKEGDKNLY 140 (178)
T ss_dssp -----HHHHHHHHHHHHHTT-SSS-EEEEE------TTT-T-------S--TTS--HHHHHHHHHHHHHHHHHTT-TTEE
T ss_pred -----HHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc-c-------cCchHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 223344444555433 245666665332 1111 1 11222234678999999999999765456788
Q ss_pred EEeccHHHHHH------HhCcccCCCc
Q 021314 279 YIDCYDIILDA------VNKPKKYGQY 299 (314)
Q Consensus 279 ~~D~~~~~~~i------~~nP~~yGf~ 299 (314)
|+|-..++-+- --||..+||.
T Consensus 141 ~l~g~~llg~d~e~tvDgvHP~DlG~~ 167 (178)
T PF14606_consen 141 YLDGEELLGDDHEATVDGVHPNDLGMM 167 (178)
T ss_dssp EE-HHHCS-------------------
T ss_pred EeCchhhcCcccccccccccccccccc
Confidence 88887755222 2267777774
No 30
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.47 E-value=0.012 Score=49.40 Aligned_cols=89 Identities=22% Similarity=0.281 Sum_probs=58.1
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHc-CCceEEEeCCCCCCccCccccccCCccchH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSL-GATRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~-GAr~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
.+++|++|+||.... .+. +...+.+.+.++++.+. ...+++++++||..-.+. +..
T Consensus 53 d~v~i~~G~ND~~~~----------~~~----~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~---------~~~ 109 (174)
T cd01841 53 SKVFLFLGTNDIGKE----------VSS----NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE---------IKT 109 (174)
T ss_pred CEEEEEeccccCCCC----------CCH----HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc---------ccc
Confidence 788999999998531 122 23455666666666654 356788898888653322 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
..+...+.||+.+++..++ -.+.++|++..+.+
T Consensus 110 ~~~~~~~~~n~~l~~~a~~------~~~~~id~~~~~~~ 142 (174)
T cd01841 110 RSNTRIQRLNDAIKELAPE------LGVTFIDLNDVLVD 142 (174)
T ss_pred CCHHHHHHHHHHHHHHHHH------CCCEEEEcHHHHcC
Confidence 3345577899888875443 23889999998754
No 31
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.06 E-value=0.11 Score=43.41 Aligned_cols=87 Identities=21% Similarity=0.292 Sum_probs=52.6
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEeCCCCCCccCccccccCCccchH
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGA-TRLVVVGVPPLGCMPIVKTLQDQTACVE 249 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GA-r~~vV~~lpplg~~P~~~~~~~~~~c~~ 249 (314)
.++++.+|+||+... .+ .+...+++.+.|+++.+.+. .+++++.+||. | .. .
T Consensus 52 ~~vvi~~G~ND~~~~----------~~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~--------~ 104 (171)
T cd04502 52 RRVVLYAGDNDLASG----------RT----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR--------W 104 (171)
T ss_pred CEEEEEEecCcccCC----------CC----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc--------h
Confidence 689999999997431 12 23456667777777777653 35777766542 1 10 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHH
Q 021314 250 SYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDA 289 (314)
Q Consensus 250 ~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i 289 (314)
..+...+.+|+.+++..+ + .-.+.++|++..+.+.
T Consensus 105 ~~~~~~~~~n~~~~~~a~----~-~~~v~~vD~~~~~~~~ 139 (171)
T cd04502 105 ALRPKIRRFNALLKELAE----T-RPNLTYIDVASPMLDA 139 (171)
T ss_pred hhHHHHHHHHHHHHHHHh----c-CCCeEEEECcHHHhCC
Confidence 122335667776665433 2 2347899999887643
No 32
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=96.00 E-value=0.05 Score=47.41 Aligned_cols=87 Identities=15% Similarity=0.282 Sum_probs=54.1
Q ss_pred CceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcC-CceEEEeCCCCCCccCccccccCCccch
Q 021314 170 NSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLG-ATRLVVVGVPPLGCMPIVKTLQDQTACV 248 (314)
Q Consensus 170 ~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~~c~ 248 (314)
-.+++|++|+||+... .+.+ ...+.+...|+++.+.. -.+|++++++|.+..|
T Consensus 90 pd~VvI~~G~ND~~~~----------~~~~----~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~------------ 143 (214)
T cd01820 90 PKVVVLLIGTNNIGHT----------TTAE----EIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP------------ 143 (214)
T ss_pred CCEEEEEecccccCCC----------CCHH----HHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc------------
Confidence 3789999999998531 1233 34556666667666653 3468888888765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHH
Q 021314 249 ESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIIL 287 (314)
Q Consensus 249 ~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~ 287 (314)
..+.+....+|+.+++... + ...+.++|++..+.
T Consensus 144 ~~~~~~~~~~n~~l~~~~~----~-~~~v~~vd~~~~~~ 177 (214)
T cd01820 144 NPLRERNAQVNRLLAVRYD----G-LPNVTFLDIDKGFV 177 (214)
T ss_pred hhHHHHHHHHHHHHHHHhc----C-CCCEEEEeCchhhc
Confidence 1233445667777654432 2 23688999998864
No 33
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.98 E-value=0.032 Score=46.49 Aligned_cols=86 Identities=16% Similarity=0.311 Sum_probs=54.4
Q ss_pred CceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHH--cCCceEEEeCCCCCCccCccccccCCccc
Q 021314 170 NSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKS--LGATRLVVVGVPPLGCMPIVKTLQDQTAC 247 (314)
Q Consensus 170 ~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~--~GAr~~vV~~lpplg~~P~~~~~~~~~~c 247 (314)
-.++++.+|.||.... .+++ .....+.+.|+++.+ .++ ++++.++||.+ +.
T Consensus 49 pd~vvl~~G~ND~~~~----------~~~~----~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~---------- 101 (169)
T cd01828 49 PKAIFIMIGINDLAQG----------TSDE----DIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL---------- 101 (169)
T ss_pred CCEEEEEeeccCCCCC----------CCHH----HHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc----------
Confidence 3889999999998531 1222 344556666666666 455 58888888865 10
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
....+.....||+.+++..++ -.+.++|.++.+.+
T Consensus 102 ~~~~~~~~~~~n~~l~~~a~~------~~~~~id~~~~~~~ 136 (169)
T cd01828 102 KSIPNEQIEELNRQLAQLAQQ------EGVTFLDLWAVFTN 136 (169)
T ss_pred CcCCHHHHHHHHHHHHHHHHH------CCCEEEechhhhcC
Confidence 112334567899888775442 24677899887643
No 34
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=95.78 E-value=0.064 Score=43.70 Aligned_cols=96 Identities=14% Similarity=0.181 Sum_probs=59.0
Q ss_pred hcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHH-cCCceEEEeCCCCCCccCccccccCCcc
Q 021314 168 IGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKS-LGATRLVVVGVPPLGCMPIVKTLQDQTA 246 (314)
Q Consensus 168 ~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~-~GAr~~vV~~lpplg~~P~~~~~~~~~~ 246 (314)
.+-.++++.+|+||+.... .... ....+.+...++++.+ ....+|++++.||....|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~--------~~~~----~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG--------DTSI----DEFKANLEELLDALRERAPGAKVILITPPPPPPREG--------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc--------ccCH----HHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch---------
Confidence 3558999999999996521 0111 2333445555555554 5566888888888877654
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHH
Q 021314 247 CVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDA 289 (314)
Q Consensus 247 c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i 289 (314)
..+.....+|..+++..++... ...+.++|++..+...
T Consensus 123 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~ 160 (187)
T cd00229 123 ---LLGRALPRYNEAIKAVAAENPA--PSGVDLVDLAALLGDE 160 (187)
T ss_pred ---hhHHHHHHHHHHHHHHHHHcCC--CcceEEEEhhhhhCCC
Confidence 2233456677777665444311 1358899999887643
No 35
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.70 E-value=0.12 Score=48.91 Aligned_cols=85 Identities=14% Similarity=0.137 Sum_probs=50.8
Q ss_pred ceecccCccCCCCCCCcccccCHHHHHHHHHHHHHHHhhhhchhhHHhhhcC--ceEEEEcccchhhhhhhcCCccCccC
Q 021314 119 VSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGN--SIFLLSMGTNDFLQNYYLEPTRSRQY 196 (314)
Q Consensus 119 ~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~--sL~~v~iG~ND~~~~~~~~~~~~~~~ 196 (314)
.|-|++||.. -+|..|-+...+..+ ...+-. ..+ -|+.||||+||+-.. -..+ .
T Consensus 150 lNvA~~Ga~s----------~Dlp~QAr~Lv~rik---~~~~i~-----~~~dWKLi~IfIG~ND~c~~-c~~~-----~ 205 (397)
T KOG3670|consen 150 LNVAEPGAES----------EDLPDQARDLVSRIK---KDKEIN-----MKNDWKLITIFIGTNDLCAY-CEGP-----E 205 (397)
T ss_pred cccccccccc----------hhhHHHHHHHHHHHH---hccCcc-----cccceEEEEEEeccchhhhh-ccCC-----C
Confidence 4555555542 356677776554433 222211 122 599999999999873 2221 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCceEEEe
Q 021314 197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVV 227 (314)
Q Consensus 197 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~ 227 (314)
+....++.-.+.|.++++.|.+.=-|.||++
T Consensus 206 ~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~l 236 (397)
T KOG3670|consen 206 TPPSPVDQHKRNIRKALEILRDNVPRTIVSL 236 (397)
T ss_pred CCCCchhHHHHHHHHHHHHHHhcCCceEEEE
Confidence 1122334445678899999999888887655
No 36
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=94.64 E-value=0.33 Score=42.01 Aligned_cols=14 Identities=21% Similarity=0.480 Sum_probs=12.7
Q ss_pred CceEEEEcccchhh
Q 021314 170 NSIFLLSMGTNDFL 183 (314)
Q Consensus 170 ~sL~~v~iG~ND~~ 183 (314)
-++++|.+|+||..
T Consensus 78 ~d~v~i~lG~ND~~ 91 (216)
T COG2755 78 PDLVIIMLGGNDIG 91 (216)
T ss_pred CCEEEEEeeccccc
Confidence 58999999999996
No 37
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=93.40 E-value=0.56 Score=43.27 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=36.9
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCc--eEEEeCCCCC
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGAT--RLVVVGVPPL 232 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr--~~vV~~lppl 232 (314)
.+++|++|+||.....- +. ....+++ +--.++.+.|+.|.+..-+ +++++++|++
T Consensus 124 ~lVtI~lGgND~C~g~~-d~--~~~tp~e----efr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIYSMIGNDVCNGPN-DT--INHTTPE----EFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEEEeccchhhcCCC-cc--ccCcCHH----HHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 78888999999976311 11 0123343 3445677788888888744 8999999984
No 38
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=90.80 E-value=1.3 Score=38.78 Aligned_cols=106 Identities=19% Similarity=0.291 Sum_probs=65.2
Q ss_pred CceEEEEcccchhhhhhhcCCcc-CccCCHHHHHHHHHHHHHHHHHHHHHcC-CceEEEeCCCCCCccCccccccCCccc
Q 021314 170 NSIFLLSMGTNDFLQNYYLEPTR-SRQYTVEQYENYLVSSMFEDIKAMKSLG-ATRLVVVGVPPLGCMPIVKTLQDQTAC 247 (314)
Q Consensus 170 ~sL~~v~iG~ND~~~~~~~~~~~-~~~~~~~~~v~~~v~~i~~~v~~L~~~G-Ar~~vV~~lpplg~~P~~~~~~~~~~c 247 (314)
-.+++|+.|+||-... .+.. ......++|+ +++++.++-|...- -.+|++.+-||+...-...... ..|
T Consensus 69 p~lvtVffGaNDs~l~---~~~~~~~hvPl~Ey~----dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~--e~~ 139 (245)
T KOG3035|consen 69 PVLVTVFFGANDSCLP---EPSSLGQHVPLEEYK----DNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ--EPY 139 (245)
T ss_pred ceEEEEEecCccccCC---CCCCCCCccCHHHHH----HHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc--cch
Confidence 3789999999997542 1111 1123455554 45555555555544 3467888878776653333321 233
Q ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHH
Q 021314 248 V---ESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAV 290 (314)
Q Consensus 248 ~---~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~ 290 (314)
. .+.|+.+..|++.+.+..+++ .+..+|.++.+++.-
T Consensus 140 ~~~~~RtNe~~~~Ya~ac~~la~e~------~l~~vdlws~~Q~~~ 179 (245)
T KOG3035|consen 140 VLGPERTNETVGTYAKACANLAQEI------GLYVVDLWSKMQESD 179 (245)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHh------CCeeeeHHhhhhhcc
Confidence 3 358999999999888776654 455678776666543
No 39
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=89.58 E-value=0.5 Score=35.97 Aligned_cols=22 Identities=45% Similarity=0.519 Sum_probs=12.3
Q ss_pred CcchhhHHHHHHHHHHHHHHHhhh
Q 021314 1 MALKAMRVLVVMALVAALMQLSQA 24 (314)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (314)
||||+ ++++.+++|++|++++.
T Consensus 1 MaSK~--~llL~l~LA~lLlisSe 22 (95)
T PF07172_consen 1 MASKA--FLLLGLLLAALLLISSE 22 (95)
T ss_pred CchhH--HHHHHHHHHHHHHHHhh
Confidence 89776 44544555555554433
No 40
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=84.94 E-value=3.7 Score=33.43 Aligned_cols=14 Identities=21% Similarity=0.299 Sum_probs=11.8
Q ss_pred cCceEEEEcccchh
Q 021314 169 GNSIFLLSMGTNDF 182 (314)
Q Consensus 169 ~~sL~~v~iG~ND~ 182 (314)
...+++|++|+||.
T Consensus 50 ~~d~vvi~lGtNd~ 63 (150)
T cd01840 50 LRKTVVIGLGTNGP 63 (150)
T ss_pred CCCeEEEEecCCCC
Confidence 34788999999997
No 41
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=80.97 E-value=1.9 Score=40.68 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=50.8
Q ss_pred hcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCcccc
Q 021314 168 IGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKT 240 (314)
Q Consensus 168 ~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~ 240 (314)
..+.++..|+|+||+...-... ........+......+..++..++.++.-+||+.+.|.++..|..+.
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~----~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARS----TEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred CcccccCcccccccHhhhcccc----ccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 4668899999999998743221 11111123344556678889999999999999999999999998764
No 42
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.68 E-value=15 Score=34.25 Aligned_cols=92 Identities=17% Similarity=0.251 Sum_probs=52.7
Q ss_pred ceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHc---CCceEEEeCCCCCCccCccccccCCccc
Q 021314 171 SIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSL---GATRLVVVGVPPLGCMPIVKTLQDQTAC 247 (314)
Q Consensus 171 sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~---GAr~~vV~~lpplg~~P~~~~~~~~~~c 247 (314)
+.++|.+|.||.-...... ......+ + .=.+++.+-+.++.+. ---+++.+++|++-
T Consensus 179 a~vVV~lGaND~q~~~~gd-~~~kf~S-~----~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r-------------- 238 (354)
T COG2845 179 AAVVVMLGANDRQDFKVGD-VYEKFRS-D----EWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR-------------- 238 (354)
T ss_pred cEEEEEecCCCHHhcccCC-eeeecCc-h----HHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc--------------
Confidence 6678899999998743221 1000001 1 1223333444444332 23468899998854
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHH
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILD 288 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~ 288 (314)
.+.+|+-...+|...++.++.+..+ ++|+++.+-+
T Consensus 239 ~~~l~~dm~~ln~iy~~~vE~~~gk------~i~i~d~~v~ 273 (354)
T COG2845 239 KKKLNADMVYLNKIYSKAVEKLGGK------FIDIWDGFVD 273 (354)
T ss_pred ccccchHHHHHHHHHHHHHHHhCCe------EEEecccccc
Confidence 3556666778999998888877433 4455555433
No 43
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=75.82 E-value=12 Score=33.14 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=48.8
Q ss_pred EEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHH
Q 021314 174 LLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNK 253 (314)
Q Consensus 174 ~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~ 253 (314)
.++.|.+.....|- . .-....+ ....-+.+.++.|.+.|.|+|+|+|=.- +
T Consensus 61 ~i~yG~s~~h~~fp---G-Tisl~~~----t~~~~l~di~~sl~~~Gf~~ivivngHg--------------G------- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGFP---G-TISLSPE----TLIALLRDILRSLARHGFRRIVIVNGHG--------------G------- 111 (237)
T ss_dssp -B--BB-GCCTTST---T--BBB-HH----HHHHHHHHHHHHHHHHT--EEEEEESST--------------T-------
T ss_pred CCccccCcccCCCC---C-eEEeCHH----HHHHHHHHHHHHHHHcCCCEEEEEECCH--------------h-------
Confidence 45788888765432 1 0112222 3344466778889999999999998321 1
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCEEEEEeccHHHHHHH
Q 021314 254 VAASLNSKIREKLAILRRTI-GIKAAYIDCYDIILDAV 290 (314)
Q Consensus 254 ~~~~~N~~L~~~l~~L~~~~-g~~i~~~D~~~~~~~i~ 290 (314)
....|+..+++|++++ +..+.++|.+.+.....
T Consensus 112 ----N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 112 ----NIAALEAAARELRQEYPGVKVFVINWWQLAEDEG 145 (237)
T ss_dssp ----HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCHH
T ss_pred ----HHHHHHHHHHHHHhhCCCcEEEEeechhccchhh
Confidence 1134666777788887 99999999998865543
No 44
>PLN02757 sirohydrochlorine ferrochelatase
Probab=66.92 E-value=22 Score=29.43 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEe---ccH
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYID---CYD 284 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D---~~~ 284 (314)
+.+.|++|.+.|+|+|+|. |.++.... ....-+.+.++++++++ +.+|.+.. .+.
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G~-------------H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~p 118 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPGR-------------HWQEDIPALTAEAAKEHPGVKYLVTAPIGLHE 118 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCCc-------------chHhHHHHHHHHHHHHCCCcEEEECCCCCCCH
Confidence 4566788888999999984 66665431 12344677788888999 99998754 444
Q ss_pred HHHHHHhCccc------CCCcccCccccCCCC
Q 021314 285 IILDAVNKPKK------YGQYFASQAVLALKQ 310 (314)
Q Consensus 285 ~~~~i~~nP~~------yGf~~~~~aCcg~g~ 310 (314)
.+.+++.+=-. -+.....+.|-|.|.
T Consensus 119 ~l~~ll~~Ri~eal~~~~~~~~~~~~~~~~~~ 150 (154)
T PLN02757 119 LMVDVVNDRIKYCLSHVAGDADECDVCAGTGK 150 (154)
T ss_pred HHHHHHHHHHHHHhhcccCCCCccceeecccc
Confidence 56655543111 122334566666553
No 45
>PF15240 Pro-rich: Proline-rich
Probab=62.22 E-value=6.3 Score=33.42 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhhhccCCccEEEE--cCCCccccCC
Q 021314 10 VVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLV--FGDSSVDPGN 54 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v--FGDSlsD~Gn 54 (314)
+|++|.+|||+|+.|.... +......+..++. -+|+--+.|+
T Consensus 2 LlVLLSvALLALSSAQ~~d---Edv~~e~~~~~~~~~~e~~~q~~g~ 45 (179)
T PF15240_consen 2 LLVLLSVALLALSSAQSTD---EDVSQEESPSVISDEPEDQSQQSGQ 45 (179)
T ss_pred hhHHHHHHHHHhhhccccc---cccccccCcccccccccCcCcccCc
Confidence 3466677788899998744 3444444444444 2556555555
No 46
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=57.55 E-value=24 Score=28.14 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGI 275 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~ 275 (314)
.+..+.++..||+.|.+.|++++++|++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~~ 97 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHHA 97 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4667788999999999999999998643
No 47
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=52.29 E-value=34 Score=26.83 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 021314 248 VESYNKVAASLNSKIREKLAILRRTIGIKA 277 (314)
Q Consensus 248 ~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i 277 (314)
.+..+.+...||+.|.+.|++++++|++-|
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~~vI 86 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHHAII 86 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 466778899999999999999999874433
No 48
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=49.16 E-value=15 Score=26.59 Aligned_cols=21 Identities=19% Similarity=0.539 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCceEEEeCC
Q 021314 209 MFEDIKAMKSLGATRLVVVGV 229 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~l 229 (314)
+.+.+.+|.++||+.|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 445678899999999999865
No 49
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=46.98 E-value=48 Score=24.75 Aligned_cols=52 Identities=29% Similarity=0.465 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEe
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYID 281 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D 281 (314)
+.+.+++|.+.|+++++|. |.++.... .....+.+.+++++.++ +.+|.+.+
T Consensus 46 ~~~~l~~l~~~g~~~v~vv--------Plfl~~G~-------------h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 46 LAEALDELAAQGATRIVVV--------PLFLLAGG-------------HVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHHcCCCEEEEE--------eeEeCCCc-------------cccccHHHHHHHHHHHCCCeEEEecC
Confidence 3446778888999999885 55554321 12234556666677777 88887754
No 50
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=46.14 E-value=25 Score=26.89 Aligned_cols=23 Identities=26% Similarity=0.393 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHcCCceEEEeCC
Q 021314 207 SSMFEDIKAMKSLGATRLVVVGV 229 (314)
Q Consensus 207 ~~i~~~v~~L~~~GAr~~vV~~l 229 (314)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 35677888999999999999764
No 51
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=44.30 E-value=71 Score=28.80 Aligned_cols=120 Identities=18% Similarity=0.328 Sum_probs=67.8
Q ss_pred hcCceEEEEcccchhhhhhhcC------Cc-cCccCCHHH------HHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCc
Q 021314 168 IGNSIFLLSMGTNDFLQNYYLE------PT-RSRQYTVEQ------YENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGC 234 (314)
Q Consensus 168 ~~~sL~~v~iG~ND~~~~~~~~------~~-~~~~~~~~~------~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~ 234 (314)
..-++++|..|..-....-..+ +. .....+.+. -++++++.+...++.|....-+-=+|+++.|+
T Consensus 100 ~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV-- 177 (251)
T PF08885_consen 100 EEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPV-- 177 (251)
T ss_pred HhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccc--
Confidence 3446888889988764421110 00 001111111 24567777777777777776654466677774
Q ss_pred cCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHHhCcccC
Q 021314 235 MPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKY 296 (314)
Q Consensus 235 ~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~~nP~~y 296 (314)
|...+..+. =.-..|..++ +.|+..+.+|.+++ .++.||-.|.++++-+.++.-|
T Consensus 178 -rl~~T~~~~--d~~~an~~SK---s~Lr~a~~~l~~~~-~~v~YFPSYEiv~d~lrdyrfy 232 (251)
T PF08885_consen 178 -RLIATFRDR--DGLVANQYSK---STLRAAAHELVRAF-DDVDYFPSYEIVMDELRDYRFY 232 (251)
T ss_pred -hhhcccccc--cchhhhhhhH---HHHHHHHHHHHhcC-CCceEcchHhhccCcccccccc
Confidence 443332211 1122334333 46777888887774 4678999999988666555433
No 52
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=42.63 E-value=1.1e+02 Score=27.96 Aligned_cols=82 Identities=16% Similarity=0.254 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCceEEEeCCCCCCccCccccccC----------------CccchHHHHHHHHHH---------------
Q 021314 210 FEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQD----------------QTACVESYNKVAASL--------------- 258 (314)
Q Consensus 210 ~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~----------------~~~c~~~~n~~~~~~--------------- 258 (314)
.-.+++|..+|.|.|+|..-|- ..|.+....+ ..+....+- .++.|
T Consensus 35 ~y~l~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~-~a~~fv~~~~f~l~LGDNi~ 111 (286)
T COG1209 35 YYPLETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVL-IAEDFVGDDDFVLYLGDNIF 111 (286)
T ss_pred HhHHHHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHH-HHHhhcCCCceEEEecCcee
Confidence 3457889999999999988772 1233322211 112222111 22222
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEeccHHHHHHHhCcccCCCcccC
Q 021314 259 NSKIREKLAILRRTI-GIKAAYIDCYDIILDAVNKPKKYGQYFAS 302 (314)
Q Consensus 259 N~~L~~~l~~L~~~~-g~~i~~~D~~~~~~~i~~nP~~yGf~~~~ 302 (314)
-..|.+.++.+.++- |+.|...-+ +||.+||..+..
T Consensus 112 ~~~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~d 148 (286)
T COG1209 112 QDGLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVEFD 148 (286)
T ss_pred ccChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEEEc
Confidence 116777777777766 888777665 599999975543
No 53
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=41.27 E-value=40 Score=31.14 Aligned_cols=108 Identities=18% Similarity=0.103 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCcc------------------ccccC-CccchHHHHHHHHHHHH--
Q 021314 202 ENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIV------------------KTLQD-QTACVESYNKVAASLNS-- 260 (314)
Q Consensus 202 v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~------------------~~~~~-~~~c~~~~n~~~~~~N~-- 260 (314)
.+++++.++++++-|++-|+.=|+|=++.++-+.=.. ....- ..+-.-.-......||+
T Consensus 138 fd~l~~ay~eq~~~Li~gG~D~iLiET~~D~l~~KaA~~a~~~~~~~~~~~LPv~~s~Ti~~sG~tl~Gq~~~a~~~~l~ 217 (311)
T COG0646 138 FDELVEAYREQVEGLIDGGADLILIETIFDTLNAKAAVFAAREVFEELGVRLPVMISGTITDSGRTLSGQTIEAFLNSLE 217 (311)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEehhccHHHHHHHHHHHHHHHHhcCCcccEEEEEEEecCceecCCCcHHHHHHHhh
Confidence 5688899999999999999999999888886653322 11000 00000000011112222
Q ss_pred ----------------HHHHHHHHHHHh---------------c-CCEEEEEeccHHHHHHHhCcccCCCcccCccccCC
Q 021314 261 ----------------KIREKLAILRRT---------------I-GIKAAYIDCYDIILDAVNKPKKYGQYFASQAVLAL 308 (314)
Q Consensus 261 ----------------~L~~~l~~L~~~---------------~-g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~ 308 (314)
.++..|++|..- . |-+++|-+....|.+.+..-.+=|+.+.-..|||+
T Consensus 218 ~~~~~~vGlNCa~Gp~~m~~~l~~ls~~~~~~vs~~PNAGLP~~~g~~~~Y~~~p~~~a~~~~~f~~~g~vnIvGGCCGT 297 (311)
T COG0646 218 HLGPDAVGLNCALGPDEMRPHLRELSRIADAFVSVYPNAGLPNAFGERAVYDLTPEYMAEALAEFAEEGGVNIVGGCCGT 297 (311)
T ss_pred ccCCcEEeeccccCHHHHHHHHHHHHhccCceEEEeCCCCCCcccCCccccCCCHHHHHHHHHHHHHhCCceeeccccCC
Confidence 455566666542 2 45677888888999999988888999988999997
Q ss_pred C
Q 021314 309 K 309 (314)
Q Consensus 309 g 309 (314)
-
T Consensus 298 T 298 (311)
T COG0646 298 T 298 (311)
T ss_pred C
Confidence 3
No 54
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=40.58 E-value=33 Score=31.81 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeCCCCCC-ccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEe
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVGVPPLG-CMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYID 281 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~lpplg-~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D 281 (314)
.-++.+.+.++++.++|.+.|+++++|+-. .-+..- .+ +..=|..+++.+..+++++ +. +++.|
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~g--------s~-----a~~~~g~v~~air~iK~~~pdl-~vi~D 113 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSG--------SA-----ADDEDGPVIQAIKLIREEFPEL-LIACD 113 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCcc--------cc-----ccCCCChHHHHHHHHHHhCCCc-EEEEe
Confidence 346788889999999999999999997532 222200 00 1112345566777788887 65 44556
Q ss_pred c
Q 021314 282 C 282 (314)
Q Consensus 282 ~ 282 (314)
+
T Consensus 114 v 114 (320)
T cd04824 114 V 114 (320)
T ss_pred e
Confidence 5
No 55
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=39.08 E-value=14 Score=29.82 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=20.8
Q ss_pred EEeccHHHHHHHhCcccCCCcccCcc-ccCCCCCC
Q 021314 279 YIDCYDIILDAVNKPKKYGQYFASQA-VLALKQVL 312 (314)
Q Consensus 279 ~~D~~~~~~~i~~nP~~yGf~~~~~a-Ccg~g~~~ 312 (314)
..+-.........||+.||...-.+- |--.|||+
T Consensus 113 ~lr~Ee~ek~~k~nPAnFG~~c~R~CiCEv~GQvP 147 (169)
T KOG4079|consen 113 VLRREELEKIAKLNPANFGSKCERQCICEVQGQVP 147 (169)
T ss_pred HHhHHHHHHHhhcChhhhcccccceEEEecCCcCC
Confidence 44555566677889999997654432 22344443
No 56
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=39.07 E-value=50 Score=30.77 Aligned_cols=63 Identities=16% Similarity=0.337 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEec
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYIDC 282 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D~ 282 (314)
..++.+.+.++++.++|.+.|+++++|.. .-+. ..+..|. |..+.+.+..+++++ +. +++.|+
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~---------gs~A~~~-----~g~v~rair~iK~~~p~l-~vi~DV 119 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDED---------GSEAYNP-----DGLVQRAIRAIKKAFPEL-GVITDV 119 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcc---------cccccCC-----CCHHHHHHHHHHHhCCCc-EEEEee
Confidence 44677888999999999999999998532 2211 1111111 345667778888888 65 445565
No 57
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=38.78 E-value=22 Score=26.87 Aligned_cols=53 Identities=28% Similarity=0.310 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEec
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYIDC 282 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D~ 282 (314)
+.+.+++|.+.|+++|+|+ |.++.... ....-+.+.+++++.++ +.+|.+...
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G~-------------h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPGY-------------HVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSSH-------------HHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCcc-------------chHhHHHHHHHHHHhhCCceEEEECCC
Confidence 3456688899999999886 56654321 11123667788888888 888888654
No 58
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=37.23 E-value=1.1e+02 Score=28.63 Aligned_cols=63 Identities=11% Similarity=0.198 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEec
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYIDC 282 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D~ 282 (314)
.-++.+.+.++++.++|.+.|+++++|+. .-+. ..+..| =|..+++.+..+++++ +.- ++.|+
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~---------gs~A~~-----~~g~v~~air~iK~~~pdl~-vi~DV 121 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDAK---------GSDTWD-----DNGLLARMVRTIKAAVPEMM-VIPDI 121 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCC---------cccccC-----CCChHHHHHHHHHHHCCCeE-EEeee
Confidence 34678888999999999999999999642 2221 111111 1455677788888888 654 45565
No 59
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=37.20 E-value=64 Score=29.90 Aligned_cols=67 Identities=15% Similarity=0.247 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEec
Q 021314 203 NYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTIGIKAAYIDC 282 (314)
Q Consensus 203 ~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~g~~i~~~D~ 282 (314)
.-.++.+.+.++++.++|.+-|+++++|+-+. .-. |- ..+..-|..+++.+..+++.+.--++..|+
T Consensus 57 r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~~----Kd~-----~g----s~A~~~~givqravr~ik~~~p~l~iitDv 123 (330)
T COG0113 57 RYSLDRLVEEAEELVDLGIPAVILFGVPDDSK----KDE-----TG----SEAYDPDGIVQRAVRAIKEAFPELVVITDV 123 (330)
T ss_pred eccHHHHHHHHHHHHhcCCCEEEEeCCCcccc----cCc-----cc----ccccCCCChHHHHHHHHHHhCCCeEEEeee
Confidence 34578888899999999999999999996321 111 10 111122445677777788777323445565
No 60
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=34.75 E-value=1.3e+02 Score=27.97 Aligned_cols=64 Identities=13% Similarity=0.217 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeCCCC-CCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEe
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVGVPP-LGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYID 281 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~lpp-lg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D 281 (314)
..++.+.+.++++.++|.+.|++++++| -..-+.. .+..| =|.-+.+.+..+++++ +. +++.|
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~g---------s~A~~-----~~g~v~~air~iK~~~p~l-~vi~D 115 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDG---------SEAYN-----PDNLVCRAIRAIKEAFPEL-GIITD 115 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCccc---------ccccC-----CCChHHHHHHHHHHhCCCc-EEEEe
Confidence 3467888999999999999999999843 2122211 11111 1345667777788887 65 44556
Q ss_pred c
Q 021314 282 C 282 (314)
Q Consensus 282 ~ 282 (314)
+
T Consensus 116 V 116 (320)
T cd04823 116 V 116 (320)
T ss_pred e
Confidence 5
No 61
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=34.31 E-value=1.3e+02 Score=27.38 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=35.1
Q ss_pred cCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCC
Q 021314 169 GNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPP 231 (314)
Q Consensus 169 ~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpp 231 (314)
++..++|-+|+|=+-. ++..+.+...|.-|+..|.|-++|.+-.|
T Consensus 34 ~~~f~VIK~GG~~~~~------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC------------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 4678888899886521 13456677888999999999999999876
No 62
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2.1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B.
Probab=34.12 E-value=12 Score=34.51 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCEEEEEeccHHHHHHHhCcccCCCcccCccccCCCCCC
Q 021314 254 VAASLNSKIREKLAILRRTIGIKAAYIDCYDIILDAVNKPKKYGQYFASQAVLALKQVL 312 (314)
Q Consensus 254 ~~~~~N~~L~~~l~~L~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~~~aCcg~g~~~ 312 (314)
+.+.|-..|.+...+-+++.|.-+.--.+-.++.+++ +|. .-..+.+||||+|+.+
T Consensus 6 ~g~~yE~~l~~~~~~~~k~~G~~~TP~~i~~l~~~~~-~~~--~~~~VlDPacGsG~fL 61 (311)
T PF02384_consen 6 LGDLYEYFLKKFAKESRKKLGQFYTPREIVDLMVKLL-NPK--KGDSVLDPACGSGGFL 61 (311)
T ss_dssp HHHHHHHHHHHHHHCTTTSCGGC---HHHHHHHHHHH-TT---TTEEEEETT-TTSHHH
T ss_pred HHHHHHHHHHHHHHHhccccceeehHHHHHHHHHhhh-hcc--ccceeechhhhHHHHH
Confidence 3445555554443322222266666677777888887 322 1234789999999753
No 63
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=33.50 E-value=95 Score=24.24 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 021314 249 ESYNKVAASLNSKIREKLAILRRTIGI 275 (314)
Q Consensus 249 ~~~n~~~~~~N~~L~~~l~~L~~~~g~ 275 (314)
+.....++.||+.|.+.|.++.++++.
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h~~ 83 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEHHV 83 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 556678899999999999999888533
No 64
>PLN00115 pollen allergen group 3; Provisional
Probab=31.24 E-value=40 Score=26.71 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=11.2
Q ss_pred CcchhhHHHHHHHHHHHHHH
Q 021314 1 MALKAMRVLVVMALVAALMQ 20 (314)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (314)
|+|+|. +++++++|+|++
T Consensus 1 ~~~~~~--~~~~~~~a~l~~ 18 (118)
T PLN00115 1 MSSLSF--LLLAVALAALFA 18 (118)
T ss_pred CchhHH--HHHHHHHHHHhh
Confidence 555554 555666777777
No 65
>PRK11274 glcF glycolate oxidase iron-sulfur subunit; Provisional
Probab=30.93 E-value=3.1e+02 Score=26.11 Aligned_cols=37 Identities=3% Similarity=-0.000 Sum_probs=23.3
Q ss_pred CCEEEEEe---------ccHHHHHHHhCcccCCCcccC--ccccCCCCC
Q 021314 274 GIKAAYID---------CYDIILDAVNKPKKYGQYFAS--QAVLALKQV 311 (314)
Q Consensus 274 g~~i~~~D---------~~~~~~~i~~nP~~yGf~~~~--~aCcg~g~~ 311 (314)
+.+|.|.| ++....++++.. ...+.+.. +-|||.||.
T Consensus 300 ~~~v~~HdpChl~~~~~~~~~~r~ll~~~-g~~~~e~~~~~~CCG~gG~ 347 (407)
T PRK11274 300 DRRVAFHPPCTLQHGQKLRGKVERLLTRL-GFELTLVADSHLCCGSAGT 347 (407)
T ss_pred CCeEEEeCcchhhcccCcHhhHHHHHHhC-CCeEEECCCCCCCcCcchh
Confidence 45676644 567888888764 23344433 349999874
No 66
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=29.49 E-value=86 Score=29.85 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCC
Q 021314 197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPL 232 (314)
Q Consensus 197 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lppl 232 (314)
+.++++.+++..+.+.++.|+++|+|.|-+=. |.+
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQiDe-p~l 194 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQLDD-TVW 194 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEecC-cch
Confidence 46788999999999999999999999876643 444
No 67
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=29.38 E-value=1.5e+02 Score=27.57 Aligned_cols=28 Identities=25% Similarity=0.585 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeCCCC
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVGVPP 231 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~lpp 231 (314)
..++.+.+.++++.++|.+.|+++++|.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~ 75 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPE 75 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4467888999999999999999999965
No 68
>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]
Probab=28.52 E-value=38 Score=27.74 Aligned_cols=43 Identities=26% Similarity=0.159 Sum_probs=24.3
Q ss_pred CcchhhHHHHHHHHHHHHHHHhhhhhHHHHhhhhccCCccEEEEcCCCccccCCC
Q 021314 1 MALKAMRVLVVMALVAALMQLSQALGIAQFRRIAAQNNVTFMLVFGDSSVDPGNN 55 (314)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~ 55 (314)
|||.+++-++.+.+. .+.+.+.|.... ..-+-.+||..|-|..
T Consensus 1 mAs~a~SeLV~FIaa-lLiaasvag~Lt-----------~~t~~l~~sm~d~~~~ 43 (154)
T COG3354 1 MASVASSELVMFIAA-LLIAASVAGALT-----------DSTTHLSDSMNDRSDM 43 (154)
T ss_pred CCccchhHHHHHHHH-HHHHHHHHHHhh-----------hhHhhhhhhhchhhHH
Confidence 888888776644332 123333332221 2334678899988874
No 69
>PRK06233 hypothetical protein; Provisional
Probab=28.39 E-value=93 Score=29.67 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCceEEEeC
Q 021314 197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVVG 228 (314)
Q Consensus 197 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~ 228 (314)
+.++++.+++..+.+.++.|+++|+|.|-+=.
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQiDe 192 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQLDD 192 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 45788999999999999999999999876644
No 70
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=27.39 E-value=1.8e+02 Score=27.15 Aligned_cols=64 Identities=17% Similarity=0.387 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEec
Q 021314 205 LVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIREKLAILRRTI-GIKAAYIDC 282 (314)
Q Consensus 205 ~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~-g~~i~~~D~ 282 (314)
-++.+.+.++++.++|.+.|+++++.+ |..+... .....| =|.-+.+.+..+++.+ +. +++.|+
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~----gs~a~~-----~~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE----GSEAYN-----PDGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS-----GGGGS-----TTSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc----hhcccC-----CCChHHHHHHHHHHhCCCc-EEEEec
Confidence 357788889999999999999998832 2112111 111111 2345567777788888 75 446665
No 71
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=27.05 E-value=69 Score=26.43 Aligned_cols=25 Identities=28% Similarity=0.413 Sum_probs=20.6
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCCC
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPLG 233 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lpplg 233 (314)
+.+.|++|.+.|+++++|+.+-|.-
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~~ 125 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQY 125 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCccc
Confidence 4567889999999999999887644
No 72
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=26.62 E-value=2.3e+02 Score=22.71 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHH
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAAS 257 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~ 257 (314)
+.+.+++|.+.|+|+|+|+-+ .+.. .|++.+-++-..
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p~-------gF~~-----D~~Etl~di~~e 115 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVPI-------GFVS-----DHLETLYELDIE 115 (135)
T ss_pred HHHHHHHHHHcCCCeEEEECC-------cccc-----ccHHHHHHHHHH
Confidence 345678899999999999643 2332 578877665433
No 73
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=25.28 E-value=75 Score=25.19 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHcCCceEEEeCC
Q 021314 207 SSMFEDIKAMKSLGATRLVVVGV 229 (314)
Q Consensus 207 ~~i~~~v~~L~~~GAr~~vV~~l 229 (314)
..+.+.+++|.+.|.++|+|..+
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl 78 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSL 78 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeC
Confidence 35678899999999999999754
No 74
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=24.66 E-value=1.2e+02 Score=28.49 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCccCccccccCCccchHHHHHHHHHHHHHHH
Q 021314 197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCMPIVKTLQDQTACVESYNKVAASLNSKIR 263 (314)
Q Consensus 197 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~P~~~~~~~~~~c~~~~n~~~~~~N~~L~ 263 (314)
+.++++.+++..+.+.++.|+++|+|.|-+=. |.+.. .|.+.....++.+|..++
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQiDe-P~l~~-----------~~~~~~~~~v~~~n~~~~ 200 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQFDE-PAFNV-----------FFDEVNDWGVAALERAIE 200 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEecc-cHHhh-----------hhHHHHHHHHHHHHHHHc
Confidence 46788899999999999999999999876642 43332 233334444555665554
No 75
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=23.84 E-value=2.9e+02 Score=24.19 Aligned_cols=23 Identities=30% Similarity=0.573 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCceEEEeCCCCCC
Q 021314 211 EDIKAMKSLGATRLVVVGVPPLG 233 (314)
Q Consensus 211 ~~v~~L~~~GAr~~vV~~lpplg 233 (314)
+.++...+.||.-|+|+.+||-.
T Consensus 114 ~~iq~ak~aGanGfiivDlPpEE 136 (268)
T KOG4175|consen 114 NYIQVAKNAGANGFIIVDLPPEE 136 (268)
T ss_pred HHHHHHHhcCCCceEeccCChHH
Confidence 34566678999999999999843
No 76
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=23.55 E-value=3.3e+02 Score=25.16 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCcc
Q 021314 197 TVEQYENYLVSSMFEDIKAMKSLGATRLVVVGVPPLGCM 235 (314)
Q Consensus 197 ~~~~~v~~~v~~i~~~v~~L~~~GAr~~vV~~lpplg~~ 235 (314)
+..+++.+++..+...++.|+++|++ ++.+.=|.+...
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~ 182 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEG 182 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhcc
Confidence 45678899999999999999999995 555554554443
No 77
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes. This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA [].; PDB: 1O9H_A 1O9G_A.
Probab=22.63 E-value=28 Score=30.76 Aligned_cols=8 Identities=0% Similarity=-0.193 Sum_probs=3.8
Q ss_pred ccccCCCC
Q 021314 303 QAVLALKQ 310 (314)
Q Consensus 303 ~aCcg~g~ 310 (314)
+||||+|+
T Consensus 57 DPCCG~gy 64 (246)
T PF11599_consen 57 DPCCGSGY 64 (246)
T ss_dssp ETT-TTSH
T ss_pred ccCCCccH
Confidence 45665554
No 78
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=22.50 E-value=3.6e+02 Score=24.52 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCc
Q 021314 143 RQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGAT 222 (314)
Q Consensus 143 ~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr 222 (314)
+++++|++..+.+.. ..+..++|.+|++=+.. +.+...+.+.|..|...|.+
T Consensus 6 ~~~~~~~~~~pyi~~----------~~~~~~VIk~gG~~~~~------------------~~l~~~~~~di~~l~~~g~~ 57 (284)
T CHL00202 6 ERVQVLSEALPYIQK----------FRGRIMVIKYGGAAMKN------------------LILKADIIKDILFLSCIGLK 57 (284)
T ss_pred HHHHHHHHHHHHHHH----------HcCCeEEEEEChHHhcC------------------cchHHHHHHHHHHHHHCCCc
Confidence 567777776544322 35578999999865421 01333456677889999999
Q ss_pred eEEEeCCCCCC
Q 021314 223 RLVVVGVPPLG 233 (314)
Q Consensus 223 ~~vV~~lpplg 233 (314)
=++|.+-.+..
T Consensus 58 ~VlVHGgg~~i 68 (284)
T CHL00202 58 IVVVHGGGPEI 68 (284)
T ss_pred EEEEeCCcHHH
Confidence 99999988743
No 79
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=21.82 E-value=2.5e+02 Score=26.33 Aligned_cols=24 Identities=29% Similarity=0.475 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCC
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPL 232 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lppl 232 (314)
+.+.|++|.+.|.+++|++-+-|.
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyPq 127 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYPQ 127 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCcc
Confidence 346678899999999999887663
No 80
>PLN02825 amino-acid N-acetyltransferase
Probab=21.69 E-value=7e+02 Score=25.06 Aligned_cols=93 Identities=16% Similarity=0.230 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhhhchhhHHhhhcCceEEEEcccchhhhhhhcCCccCccCCHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 021314 145 LEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLQNYYLEPTRSRQYTVEQYENYLVSSMFEDIKAMKSLGATRL 224 (314)
Q Consensus 145 v~~f~~~~~~~~~~~G~~~~~~~~~~sL~~v~iG~ND~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~ 224 (314)
|+||++..+-+.. ..+..|+|.+|++=+... ....+...|..|..+|.|=+
T Consensus 2 v~~fr~a~pYI~~----------~rgktfVIk~gG~~l~~~-------------------~~~~l~~DialL~~lGi~~V 52 (515)
T PLN02825 2 VRWFREAWPYIQG----------HRGSTFVVVISGEVVAGP-------------------HLDNILQDISLLHGLGIKFV 52 (515)
T ss_pred hhHHHhhhHHHHH----------HCCCEEEEEECchhhcCc-------------------hHHHHHHHHHHHHHCCCCEE
Confidence 5677665543322 355678888888654210 12445667788999999999
Q ss_pred EEeCCCC--------CCccCccccccC--CccchHHHHHHHHHHHHHHHHHH
Q 021314 225 VVVGVPP--------LGCMPIVKTLQD--QTACVESYNKVAASLNSKIREKL 266 (314)
Q Consensus 225 vV~~lpp--------lg~~P~~~~~~~--~~~c~~~~n~~~~~~N~~L~~~l 266 (314)
+|.+-.| .|..|.+..-.. +..-.+....++-.-|..|...|
T Consensus 53 lVHGggpqI~~~l~~~gi~~~f~~G~RVTd~~~L~~~~~~~G~v~~~i~a~L 104 (515)
T PLN02825 53 LVPGTHVQIDKLLAERGREPKYVGAYRITDSAALQASMEAAGKIRVMIEAKL 104 (515)
T ss_pred EEcCCCHHHHHHHHHcCCCceeeCCcccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998766 233333322111 11222223355666777777765
No 81
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=20.83 E-value=39 Score=29.02 Aligned_cols=16 Identities=31% Similarity=0.412 Sum_probs=13.0
Q ss_pred CccEEEEcCCCccccC
Q 021314 38 NVTFMLVFGDSSVDPG 53 (314)
Q Consensus 38 ~~~~l~vFGDSlsD~G 53 (314)
..+.+++||||..|.-
T Consensus 201 ~~~~~~~~GD~~ND~~ 216 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIE 216 (254)
T ss_dssp SGGGEEEEESSGGGHH
T ss_pred ccceeEEeecccccHh
Confidence 3367999999999974
No 82
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.81 E-value=1.3e+02 Score=22.07 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCceEEEeCCCCC
Q 021314 209 MFEDIKAMKSLGATRLVVVGVPPL 232 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~~lppl 232 (314)
+.+.+++|.+.|.++++|+-+.+.
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~~ 70 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAPV 70 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCccc
Confidence 345678899999999999876654
No 83
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.51 E-value=1.1e+02 Score=23.39 Aligned_cols=19 Identities=11% Similarity=0.331 Sum_probs=15.1
Q ss_pred HHHHHHHHHHcCCceEEEe
Q 021314 209 MFEDIKAMKSLGATRLVVV 227 (314)
Q Consensus 209 i~~~v~~L~~~GAr~~vV~ 227 (314)
+.+.+++|.+.|+|+|++.
T Consensus 44 i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 3456778899999999885
No 84
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=20.47 E-value=48 Score=29.76 Aligned_cols=17 Identities=24% Similarity=0.174 Sum_probs=13.9
Q ss_pred CccEEEEcCCCccccCC
Q 021314 38 NVTFMLVFGDSSVDPGN 54 (314)
Q Consensus 38 ~~~~l~vFGDSlsD~Gn 54 (314)
....+++||||..|.-=
T Consensus 205 ~~~~viafGDs~NDi~M 221 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPL 221 (271)
T ss_pred CCceEEEEcCCHHHHHH
Confidence 44789999999999753
No 85
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=20.38 E-value=1.3e+02 Score=27.05 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEeC
Q 021314 204 YLVSSMFEDIKAMKSLGATRLVVVG 228 (314)
Q Consensus 204 ~~v~~i~~~v~~L~~~GAr~~vV~~ 228 (314)
.++.-+.+..+.|+..|.|+|+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 3455566777889999999999998
Done!