Your job contains 1 sequence.
>021317
MLFFCWESPRGVEVFMETYFEGYARRLNLMGPLWQLSKTRNKVKIATAGAIPPLVELLKF
QNGTLRELAAAAILTLSAAAPNKPAIAASGAAPLLVQILHSGSVQGRVDAVTALHYLSTC
KENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTL
VETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERART
LLDLLRDTPQEKRLSSSVLEKIVYDIAARVDGADKAAETAKRLLQDMVQRSMELSMTRIQ
QRAASSAPSKIPSA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021317
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 770 1.9e-76 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 465 3.9e-44 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 280 1.6e-24 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 250 2.4e-21 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 252 5.7e-21 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 249 3.4e-20 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 247 6.3e-20 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 247 7.3e-20 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 219 8.2e-18 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 209 5.9e-16 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 194 6.8e-14 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 185 4.4e-12 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 183 6.3e-12 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 181 1.1e-11 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 169 4.9e-10 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 167 6.7e-10 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 152 1.5e-09 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 163 2.9e-09 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 160 5.7e-09 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 158 8.1e-09 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 148 1.7e-07 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 134 3.4e-07 2
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 138 1.6e-06 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 134 4.4e-06 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 127 2.7e-05 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 128 3.1e-05 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 124 5.3e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 121 0.00013 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 114 0.00062 1
TAIR|locus:2205866 - symbol:AT1G44120 species:3702 "Arabi... 106 0.00072 2
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 165/281 (58%), Positives = 203/281 (72%)
Query: 24 ARRLNLMGPL-WQLSKTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXX 82
AR +L+ L + RNK++I AGA+PPL+++LK N +LRE
Sbjct: 106 ARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPAN 165
Query: 83 XXXXXXXXXXXLLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKD 142
LL+Q+L SG+VQG+VDAVTALH LS CKE S+PILDA AV PLI+LLK+
Sbjct: 166 KAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKE 225
Query: 143 CKKYSKFAEKATALLE-ILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLS 201
CKK+SKFAEKATAL+E ILS SE+GR AIT+ + GILTLVETVEDGS +S +HAVGALLS
Sbjct: 226 CKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLS 285
Query: 202 LCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEK 261
LC+S RDKYR+LILKEGAIPGLL TV+GT ++++RA P+EK ++ LEK
Sbjct: 286 LCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRETPREKEMTPLTLEK 345
Query: 262 IVYDIAARVDGADKAAETAKRLLQDMVQRSMELSMTRIQQR 302
IVY IA +VDGA+KAAETAK+LLQDMV RSMELSM IQ +
Sbjct: 346 IVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQHK 386
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 104/265 (39%), Positives = 154/265 (58%)
Query: 40 RNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQIL 99
+NKV I AGA+ P++ L+ + TL+E LLV+++
Sbjct: 138 KNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVKVI 197
Query: 100 HSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEI 159
GS Q + DAV AL LST +N S IL + P++NLLK KK SK +EK +L+E
Sbjct: 198 KHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEA 257
Query: 160 LS-SSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEG 218
L S EE R + + +GG+L +VE +E+GSL + +HAVG LL+LCQS R KYR+ IL+EG
Sbjct: 258 LMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILREG 317
Query: 219 AIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEK-RLSSSVLEKIVYDIAARVDGADKAA 277
IPGLL LTV+GT +++ +A + + +E IV + + +DG D++
Sbjct: 318 VIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIENIVSSLISHIDGDDQSG 377
Query: 278 ETAKRLLQDMVQRSMELSMTRIQQR 302
+ AK++L +MVQ SME S+ +Q+R
Sbjct: 378 K-AKKMLAEMVQVSMEKSLRHLQER 401
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 80/260 (30%), Positives = 137/260 (52%)
Query: 40 RNKVKIATAGAIPPLVELLKFQNG-TLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQI 98
RNKV+I +GA+P L+E+L+ + + E LLV +
Sbjct: 72 RNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMASTRLVQLLVGL 131
Query: 99 --LHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVP-PLINLLKDCKKYSKFAEKATA 155
L ++Q +VD + L LST + P++ A+ P L+ ++ C K S+ A+KA A
Sbjct: 132 IGLDRLTIQAKVDGIATLQNLSTLHQ-IVPLVIASGAPYALLQVINFCDKSSELADKAVA 190
Query: 156 LLE-ILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
LLE I+S S E ++++ G I LVE +E+GS +HAVG LL +C + R+ R +I
Sbjct: 191 LLENIISHSPE---SVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNNDRETNRGMI 247
Query: 215 LKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXP----QEKRLSSSVLEKIVYDIAARV 270
L+EG +PGLL+++V+GT A+E A + K+ ++E+I+ +I
Sbjct: 248 LREGVMPGLLQVSVDGTRRAKEMARELLLLLRDCSGYVIKNKQSKIEIVEQIMREIDQ-- 305
Query: 271 DGADKAAETAKRLLQDMVQR 290
+G ++ T +L+++M+ +
Sbjct: 306 EG-ERIPGTMLKLVEEMISK 324
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 66/198 (33%), Positives = 99/198 (50%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK IA++GAI PLV LK T +E LLV +L
Sbjct: 138 NKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLE 197
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
+G + + DA TAL+ L + KEN + + + PL+ L+ D S +K+ ++ +L
Sbjct: 198 TGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFG--SNMVDKSAFVMSLL 255
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAI 220
S E + AI +GG+ LVE VE G+ + AV LL LC+ YR ++ +EGAI
Sbjct: 256 MSVPESKPAIVE-EGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESV-VYRTMVAREGAI 313
Query: 221 PGLLRLTVEGTFEAQERA 238
P L+ L+ GT A+++A
Sbjct: 314 PPLVALSQAGTSRAKQKA 331
Score = 169 (64.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/204 (30%), Positives = 98/204 (48%)
Query: 37 SKTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLV 96
+K N++KIA AGAI PL+ L+ + L+E LV
Sbjct: 93 NKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLV 152
Query: 97 QILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATAL 156
+ L G+ + +A AL LS +EN I + A+P L+NLL+ +K + +TAL
Sbjct: 153 RALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAK-KDASTAL 211
Query: 157 LEILSSSEEGRIAITNSDGGILT-LVETVED-GSLVSTQHAVGALLSLCQSCRDKYRQLI 214
L S++E +I S GI+ LVE + D GS + + A ++SL S + + I
Sbjct: 212 YS-LCSAKENKIRAVQS--GIMKPLVELMADFGSNMVDKSAF--VMSLLMSVPES-KPAI 265
Query: 215 LKEGAIPGLLRLTVEGTFEAQERA 238
++EG +P L+ + GT +E A
Sbjct: 266 VEEGGVPVLVEIVEVGTQRQKEMA 289
Score = 151 (58.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 57/199 (28%), Positives = 91/199 (45%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
L+ ++ S +Q + VTA+ LS C EN I + A+ PL+ LK +K A
Sbjct: 110 LISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAK-ENAAC 168
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
ALL LS EE ++AI S G I LV +E G + + A AL SLC + +K R +
Sbjct: 169 ALLR-LSQIEENKVAIGRS-GAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAV- 225
Query: 215 LKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYDIAARVD-GA 273
+ G + L+ L + +++ P+ K + V E V + V+ G
Sbjct: 226 -QSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESK--PAIVEEGGVPVLVEIVEVGT 282
Query: 274 DKAAETAKRLLQDMVQRSM 292
+ E A +L + + S+
Sbjct: 283 QRQKEMAVSILLQLCEESV 301
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 252 (93.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 72/220 (32%), Positives = 114/220 (51%)
Query: 40 RNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQIL 99
+NK IA GAI LV +LK T ++ LV +L
Sbjct: 257 QNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLL 316
Query: 100 HSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEI 159
+GS +G+ DA+T L+ L T ++N + A AV PL++L+ + + + AEKA +L
Sbjct: 317 LNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAE--EGTGMAEKAMVVLSS 374
Query: 160 LSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQ-SCRDKYRQLILKEG 218
L++ ++G+ AI +GGI LVE +EDGS+ + A+ LL LC S R+ R L+++EG
Sbjct: 375 LAAIDDGKEAIVE-EGGIAALVEAIEDGSVKGKEFAILTLLQLCSDSVRN--RGLLVREG 431
Query: 219 AIPGLLRLTVEGTFEAQ-ERAXXXXXXXXXXPQEKRLSSS 257
AIP L+ L+ G+ + +R P+++ SSS
Sbjct: 432 AIPPLVGLSQSGSVSVRAKRKAERLLGYLREPRKEASSSS 471
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 52/205 (25%), Positives = 91/205 (44%)
Query: 36 LSKTR--NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXX 93
L+K R N+V I +GAI L+ LL+ + +E
Sbjct: 210 LAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIK 269
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LV +L +G+ + +A AL L+ +EN I A+PPL++LL + K +
Sbjct: 270 SLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGK-KDAL 328
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
T L ++ + + A+T G + LV+ V + + A+ L SL + D ++
Sbjct: 329 TTLYKLCTLQQNKERAVTA--GAVKPLVDLVAEEGTGMAEKAMVVLSSL--AAIDDGKEA 384
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERA 238
I++EG I L+ +G+ + +E A
Sbjct: 385 IVEEGGIAALVEAIEDGSVKGKEFA 409
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 249 (92.7 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 73/201 (36%), Positives = 100/201 (49%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXL---LVQ 97
NK IA +GAI PL+ +LK G L E LV
Sbjct: 496 NKSLIAESGAIVPLIHVLK--TGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVD 553
Query: 98 ILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALL 157
+L SGS+ G+ DA TAL LS EN + +++A AV L+ L+ + EKA +L
Sbjct: 554 LLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPA--FG-MVEKAVVVL 610
Query: 158 EILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKE 217
L++ EG+IAI +GGI LVE VE GS ++A ALL LC K+ +++E
Sbjct: 611 ANLATVREGKIAI-GEEGGIPVLVEVVELGSARGKENATAALLQLCTHS-PKFCNNVIRE 668
Query: 218 GAIPGLLRLTVEGTFEAQERA 238
G IP L+ LT GT +E+A
Sbjct: 669 GVIPPLVALTKSGTARGKEKA 689
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
LV +L+S + + DAVT L LS N S I ++ A+ PLI++LK A A
Sbjct: 468 LVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
L LS EE + I + G I LV+ + GSL + A AL +L S + + +
Sbjct: 528 TLFS-LSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNL--SIHHENKTKV 583
Query: 215 LKEGAIPGLLRLTVEGTFEAQERA 238
++ GA+ L+ L ++ F E+A
Sbjct: 584 IEAGAVRYLVEL-MDPAFGMVEKA 606
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 247 (92.0 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 73/199 (36%), Positives = 99/199 (49%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXX-LLVQIL 99
NK I GAI PLV +L N +E LV +L
Sbjct: 547 NKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLL 606
Query: 100 HSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEI 159
G+ +G+ DA +AL LS +N + I+ A AV L+ LL + +KA ALL
Sbjct: 607 GKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLE---MVDKAVALLAN 663
Query: 160 LSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGA 219
LS+ EGR AI +GGI LVETV+ GS ++A LL LC + K+ L+L+EGA
Sbjct: 664 LSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLCLNS-PKFCTLVLQEGA 721
Query: 220 IPGLLRLTVEGTFEAQERA 238
IP L+ L+ GT A+E+A
Sbjct: 722 IPPLVALSQSGTQRAKEKA 740
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 247 (92.0 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 75/221 (33%), Positives = 112/221 (50%)
Query: 19 YFEGYARRLNLMGPLWQLS-KTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXX 77
Y A + N + L LS NK IA AGAI PL+ +L+ + +E
Sbjct: 596 YSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLS 655
Query: 78 XXXXXXXXXXXXXXXXLLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLI 137
LV +L +G+ +G+ DA TAL LS +EN + I+ + AV LI
Sbjct: 656 VIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLI 715
Query: 138 NLLKDCKKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVG 197
+L+ + +KA A+L L++ EGR AI +GGI LVE VE GS ++A
Sbjct: 716 DLMDPA---AGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVELGSARGKENAAA 771
Query: 198 ALLSLCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERA 238
ALL L + ++ ++L+EGA+P L+ L+ GT A+E+A
Sbjct: 772 ALLQLSTNS-GRFCNMVLQEGAVPPLVALSQSGTPRAREKA 811
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 63/246 (25%), Positives = 102/246 (41%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
N++ I +GAI LVELL + +E L+ +L
Sbjct: 578 NRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLE 637
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
+GS + + ++ L LS +EN I + A+ PL++LL + K + ATAL L
Sbjct: 638 NGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGK-KDAATALFN-L 695
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAI 220
S +E + I S G + L++ + D + AV L +L + R I +EG I
Sbjct: 696 SIHQENKAMIVQS-GAVRYLIDLM-DPAAGMVDKAVAVLANLATI--PEGRNAIGQEGGI 751
Query: 221 PGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYD--IAARVDGADKAAE 278
P L+ + G+ +E A R + VL++ +A G +A E
Sbjct: 752 PLLVEVVELGSARGKENAAAALLQLST--NSGRFCNMVLQEGAVPPLVALSQSGTPRARE 809
Query: 279 TAKRLL 284
A+ LL
Sbjct: 810 KAQALL 815
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 219 (82.2 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 55/187 (29%), Positives = 94/187 (50%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK I ++GA+ PLV L+ T +E LLV +L
Sbjct: 136 NKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLE 195
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
+G + + DA TAL+ L + EN + +++ + PL+ L+ D + S +K+ ++ +L
Sbjct: 196 NGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFE--SDMVDKSAFVMNLL 253
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAI 220
S+ E + A+ +GG+ LVE VE G+ + +V LL LC+ YR ++ +EGA+
Sbjct: 254 MSAPESKPAVVE-EGGVPVLVEIVEAGTQRQKEISVSILLQLCEESV-VYRTMVAREGAV 311
Query: 221 PGLLRLT 227
P L+ L+
Sbjct: 312 PPLVALS 318
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 56/200 (28%), Positives = 95/200 (47%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
LV ++ S +Q + VTA+ LS C EN I+ + AV PL+N L+ +K A
Sbjct: 108 LVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTK-ENAAC 166
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
ALL LS EE +I I S G I LV +E+G + + A AL SLC + +K R +
Sbjct: 167 ALLR-LSQVEENKITIGRS-GAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAV- 223
Query: 215 LKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYDIAARV--DG 272
+ G + L+ L ++ + +++ P+ K +V+E+ + + G
Sbjct: 224 -ESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESK---PAVVEEGGVPVLVEIVEAG 279
Query: 273 ADKAAETAKRLLQDMVQRSM 292
+ E + +L + + S+
Sbjct: 280 TQRQKEISVSILLQLCEESV 299
Score = 150 (57.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 37 SKTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLV 96
+K N++K+A AGAI PLV L+ + L+E LV
Sbjct: 91 NKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLV 150
Query: 97 QILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATAL 156
L G+ + +A AL LS +EN I + A+P L+NLL++ +K + +TAL
Sbjct: 151 NALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAK-KDASTAL 209
Query: 157 LEILSSSEEGRIAITNSDGGILT-LVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLIL 215
+ S++E A+ + GI+ LVE + D + +++L S + + ++
Sbjct: 210 YSLCSTNENKTRAV---ESGIMKPLVELMIDFESDMVDKSA-FVMNLLMSAPES-KPAVV 264
Query: 216 KEGAIPGLLRLTVEGTFEAQE 236
+EG +P L+ + GT +E
Sbjct: 265 EEGGVPVLVEIVEAGTQRQKE 285
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 209 (78.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 65/198 (32%), Positives = 93/198 (46%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK I+ GAIP ++E+L+ N RE LV +L
Sbjct: 454 NKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQ 513
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
G+++G+ DA+TAL LS N +DA V PL+NLLKD K ++A ++L +L
Sbjct: 514 HGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKD--KNLGMIDEALSILLLL 571
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAI 220
+S EGR AI I TLVE + G+ + + A LL L S + L+ G
Sbjct: 572 ASHPEGRQAIGQLSF-IETLVEFIRQGTPKNKECATSVLLEL-GSNNSSFILAALQFGVY 629
Query: 221 PGLLRLTVEGTFEAQERA 238
L+ +T GT AQ +A
Sbjct: 630 EYLVEITTSGTNRAQRKA 647
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 53/209 (25%), Positives = 95/209 (45%)
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LLVQ+L + +AVT L LS + N I + A+P +I +L++ + ++ E +
Sbjct: 425 LLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREAR--ENS 482
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A L LS +E ++ I S+G I LV+ ++ G+L + A+ AL +L + +K R +
Sbjct: 483 AAALFSLSMLDENKVTIGLSNG-IPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAI 541
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSS--SVLEKIVYDIAARVD 271
G + LL L + + A P+ ++ S +E +V I
Sbjct: 542 --DAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIR---Q 596
Query: 272 GADKAAETAKRLLQDMVQRSMELSMTRIQ 300
G K E A +L ++ + + +Q
Sbjct: 597 GTPKNKECATSVLLELGSNNSSFILAALQ 625
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCK-ENSSPILDATAVPPLINLLKDCKKYSKFAEK 152
LLV+ L S ++ + +V + L+ EN I +A A+P L+ LL S E
Sbjct: 383 LLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLS--YPDSGIQEN 440
Query: 153 ATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQ 212
A L LS E + I+N +G I ++E +E+G+ + +++ AL SL S D+ +
Sbjct: 441 AVTTLLNLSIDEVNKKLISN-EGAIPNIIEILENGNREARENSAAALFSL--SMLDENKV 497
Query: 213 LILKEGAIPGLLRLTVEGTFEAQERA 238
I IP L+ L GT ++ A
Sbjct: 498 TIGLSNGIPPLVDLLQHGTLRGKKDA 523
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 194 (73.4 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 63/201 (31%), Positives = 94/201 (46%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTL--REXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQI 98
NK I AGAI +VE+LK NG++ RE L+ +
Sbjct: 420 NKGAIVDAGAITDIVEVLK--NGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISL 477
Query: 99 LHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLE 158
L G+ +G+ DA TA+ L + N S + V PL LLKD ++A A+L
Sbjct: 478 LEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAG--GGMVDEALAILA 535
Query: 159 ILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKE- 217
ILS+++EG+ AI ++ I LVE + GS + ++A L LC ++ + +E
Sbjct: 536 ILSTNQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLN--VAREV 592
Query: 218 GAIPGLLRLTVEGTFEAQERA 238
GA L LT GT A+ +A
Sbjct: 593 GADVALKELTENGTDRAKRKA 613
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/133 (32%), Positives = 71/133 (53%)
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LLV++L S + + +VTAL LS + N I+DA A+ ++ +LK+ ++ E A
Sbjct: 391 LLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEAR--ENA 448
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A L LS +E ++AI + G I L+ +E+G+ + A A+ +LC +K R +
Sbjct: 449 AATLFSLSVIDENKVAI-GAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAV 507
Query: 214 ILKEGAIPGLLRL 226
K G + L RL
Sbjct: 508 --KGGIVDPLTRL 518
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCK-ENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
L++ L +G+ + + A L L+ +N I +A A+P L+ LL ++
Sbjct: 350 LLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQ-EHSV 408
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
TALL LS +E + AI ++ G I +VE +++GS+ + ++A L SL S D+ +
Sbjct: 409 TALLN-LSINEGNKGAIVDA-GAITDIVEVLKNGSMEARENAAATLFSL--SVIDENKVA 464
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERA 238
I GAI L+ L EGT ++ A
Sbjct: 465 IGAAGAIQALISLLEEGTRRGKKDA 489
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 185 (70.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 49/145 (33%), Positives = 80/145 (55%)
Query: 95 LVQILHSG-SVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LVQ+L Q ++DA+ AL+ LST N +L + + L LL + + + EK+
Sbjct: 556 LVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGE-NLWIEKS 614
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A+L L+SS+EG+ +S G I +L ++ G + AV LL LC R+ Q+
Sbjct: 615 LAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNG-RESCIQM 673
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERA 238
+L+EG IP L+ ++V GT +E++
Sbjct: 674 VLQEGVIPSLVSISVNGTPRGREKS 698
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 183 (69.5 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 60/198 (30%), Positives = 92/198 (46%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK I +AGAIP +V++LK + RE LV +L+
Sbjct: 427 NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLN 486
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
G+ +G+ DA TAL L + N + A +P L LL + S ++A A+L IL
Sbjct: 487 EGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTE--PGSGMVDEALAILAIL 544
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKEGAI 220
SS EG+ I +SD + +LVE + GS + ++A L+ LC S ++ K G +
Sbjct: 545 SSHPEGKAIIGSSDA-VPSLVEFIRTGSPRNRENAAAVLVHLC-SGDPQHLVEAQKLGLM 602
Query: 221 PGLLRLTVEGTFEAQERA 238
L+ L GT + +A
Sbjct: 603 GPLIDLAGNGTDRGKRKA 620
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LLV +L + + + +VTAL LS C+ N I+ A A+P ++ +LK K + E A
Sbjct: 398 LLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLK--KGSMEARENA 455
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A L LS +E ++ I + G I LV + +G+ + A AL +LC +K + +
Sbjct: 456 AATLFSLSVIDENKVTI-GALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAI 514
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRL--SSSVLEKIVYDIAARVD 271
+ G IP L RL E + A P+ K + SS + +V I
Sbjct: 515 --RAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRT--- 569
Query: 272 GADKAAETAKRLL 284
G+ + E A +L
Sbjct: 570 GSPRNRENAAAVL 582
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 181 (68.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/199 (27%), Positives = 95/199 (47%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK I AGA+ +V +L+ + RE LV +L
Sbjct: 417 NKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQ 476
Query: 101 SGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEIL 160
GSV+G+ DA TAL L + N + A V PL+ +L D + A++A +L +L
Sbjct: 477 YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSS-ERMADEALTILSVL 535
Query: 161 SSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLIL-KEGA 219
+S++ + AI ++ I L++ ++ + ++A LL LC+ RD + + + + GA
Sbjct: 536 ASNQVAKTAILRANA-IPPLIDCLQKDQPRNRENAAAILLCLCK--RDTEKLISIGRLGA 592
Query: 220 IPGLLRLTVEGTFEAQERA 238
+ L+ L+ +GT A+ +A
Sbjct: 593 VVPLMELSRDGTERAKRKA 611
Score = 124 (48.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 51/190 (26%), Positives = 82/190 (43%)
Query: 26 RLNLMGPLWQLSKT-RNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXX 84
R N L+ LS NK+ I +GAI LV+LL++ + ++
Sbjct: 442 RENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKG 501
Query: 85 XXXXXXXXXLLVQILHSGSVQGRVD-AVTALHYLSTCKENSSPILDATAVPPLINLLKDC 143
LV++L S + D A+T L L++ + + IL A A+PPLI+ L+
Sbjct: 502 RAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQ-- 559
Query: 144 KKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLC 203
K + E A A+L L + ++ G ++ L+E DG T+ A SL
Sbjct: 560 KDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDG----TERAKRKANSLL 615
Query: 204 QSCRDKYRQL 213
+ R R+L
Sbjct: 616 ELLRKSSRKL 625
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 41/141 (29%), Positives = 76/141 (53%)
Query: 94 LLVQILHS-GSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEK 152
+LV++L S G + + +AVT + LS + N I+ A AV ++ +L+ ++ E
Sbjct: 387 VLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEAR--EN 444
Query: 153 ATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQ 212
A A L LS ++E +I I + G I+ LV+ ++ GS+ + A AL +LC +K R
Sbjct: 445 AAATLFSLSLADENKIII-GASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRA 503
Query: 213 LILKEGAIPGLLRLTVEGTFE 233
+ + G + L+++ + + E
Sbjct: 504 V--RAGIVKPLVKMLTDSSSE 522
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 169 (64.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
L +L +G+ +G+ DAVTAL+ LST +N S +++ V L+ LK+ AE+A
Sbjct: 538 LALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN----EGVAEEAA 593
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
L +L G AI D + L+ + G+ ++AV ALL LC+S + +
Sbjct: 594 GALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKV 653
Query: 215 LKEGAIPGLLR-LTVEGTFEAQERA 238
L+ AI GLL+ L GT A+ +A
Sbjct: 654 LRAPAIAGLLQTLLFTGTKRARRKA 678
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 167 (63.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 67/264 (25%), Positives = 114/264 (43%)
Query: 26 RLNLMGPLWQLSK--TRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXX 83
R N + + LSK T N++ IA AGAIP LV LL ++ +E
Sbjct: 348 RRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNK 407
Query: 84 XXXXXXXXXXLLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDC 143
+VQ+L +G+++ R +A L LS EN I + A+P L++LL++
Sbjct: 408 ELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENG 467
Query: 144 KKYSKFAEKATALLEI-LSSSEEGRIAITNSDGGILT-LVETVEDGSLVSTQHAVGALLS 201
K + ATAL + + +GR A+ GI+T LV+ + D + +LS
Sbjct: 468 TPRGK-KDAATALFNLCIYHGNKGR-AVR---AGIVTALVKMLSDSTRHRMVDEALTILS 522
Query: 202 LCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEK 261
+ + +D + I+K +P L+ + +E A EK ++ L
Sbjct: 523 VLANNQDA-KSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGA 581
Query: 262 IVYDIAARVDGADKAAETAKRLLQ 285
+V + +G ++ A LL+
Sbjct: 582 VVPLMDLSKNGTERGKRKAISLLE 605
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLST-CKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
LVQ L S S + R +AV+ + LS +N I +A A+P L+NLL + +
Sbjct: 336 LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS-EDVATQENAI 394
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
T +L LS E + I + G + ++V+ + G++ + ++A L SL S D+ + +
Sbjct: 395 TCVLN-LSIYENNKELIMFA-GAVTSIVQVLRAGTMEARENAAATLFSL--SLADENKII 450
Query: 214 ILKEGAIPGLLRLTVEGT 231
I GAIP L+ L GT
Sbjct: 451 IGGSGAIPALVDLLENGT 468
Score = 124 (48.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 48/186 (25%), Positives = 84/186 (45%)
Query: 26 RLNLMGPLWQLSKT-RNKVKIATAGAIPPLVELLKFQNGTLR--EXXXXXXXXXXXXXXX 82
R N L+ LS NK+ I +GAIP LV+LL +NGT R +
Sbjct: 431 RENAAATLFSLSLADENKIIIGGSGAIPALVDLL--ENGTPRGKKDAATALFNLCIYHGN 488
Query: 83 XXXXXXXXXXXLLVQILHSGSVQGRVD-AVTALHYLSTCKENSSPILDATAVPPLINLLK 141
LV++L + VD A+T L L+ ++ S I+ A +P LI +L+
Sbjct: 489 KGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQ 548
Query: 142 DCKKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLS 201
+ ++ E A A+L L + ++ G ++ L++ ++G+ + A+ L
Sbjct: 549 TDQTRNR--ENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLEL 606
Query: 202 LCQSCR 207
L ++C+
Sbjct: 607 LRKACQ 612
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 152 (58.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 67/269 (24%), Positives = 111/269 (41%)
Query: 41 NKVKIATAGAIPPLVELL---KFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQ 97
NK I AG + +++L+ K N + E LV+
Sbjct: 187 NKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVK 246
Query: 98 IL----HSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
L + S Q R DA+ AL+ LS +N S IL+ +P L+N L D + +E+
Sbjct: 247 TLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDME----VSERI 302
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A+L + S EGR AI LV+ + + Q +L L R
Sbjct: 303 LAILTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNA 362
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYDIAARVDGA 273
+++ G LL LT+ G+ AQ+RA + K++S+ + R G
Sbjct: 363 MIEAGIESSLLELTLVGSPLAQKRASRVLECLRVVDKGKQVSAPIYGT---SSLGRERGH 419
Query: 274 DKAAETAKRLLQDMVQRSMELSMTRIQQR 302
D ++ ++ +VQ+S++ +M RI +R
Sbjct: 420 DLRMTDERKAVKQLVQQSLQSNMKRIVKR 448
Score = 49 (22.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 42 KVKIATAGAIPPLVELL 58
+V +A GAIPPLV ++
Sbjct: 144 RVTLAMLGAIPPLVSMI 160
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 50/203 (24%), Positives = 91/203 (44%)
Query: 36 LSKTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLL 95
++ RNK + T+G IP L +++ +
Sbjct: 499 VNNNRNKELMLTSGVIPLLEKMISCSQSQ-GPATALYLNLSCLEKAKPVIGSSQAVSFFV 557
Query: 96 VQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATA 155
+L Q ++DA+ AL+ LST N +L + + L +L + + EK+ A
Sbjct: 558 NLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSL-QVLASTGNHL-WIEKSLA 615
Query: 156 LLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLIL 215
+L L+SS EG+ + + G I TL ++ G V + AV L+ LC + Q++L
Sbjct: 616 VLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGS-ESCIQMVL 674
Query: 216 KEGAIPGLLRLTVEGTFEAQERA 238
+EG IP L+ ++V G+ ++++
Sbjct: 675 QEGVIPSLVSISVNGSPRGRDKS 697
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 160 (61.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 55/201 (27%), Positives = 89/201 (44%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTL--REXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQI 98
NK I ++GA+P +V +LK NG++ RE LV +
Sbjct: 442 NKASIISSGAVPSIVHVLK--NGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVL 499
Query: 99 LHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLE 158
L GS +G+ DA AL L + N + A VP ++ L+ + ++A A+L
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN--PTGALMDEAMAILS 557
Query: 159 ILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLILKE- 217
ILSS EG+ AI ++ + LVE + G+ + ++A +L LC +E
Sbjct: 558 ILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQEC 616
Query: 218 GAIPGLLRLTVEGTFEAQERA 238
G + L L + GT + +A
Sbjct: 617 GIMVPLRELALNGTDRGKRKA 637
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 158 (60.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 67/263 (25%), Positives = 111/263 (42%)
Query: 31 GPLWQLSK--TRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXX 88
G + L+K N++ IA AGAIP LV LL + +E
Sbjct: 345 GEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVD 404
Query: 89 XXXXXLLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSK 148
+V++L +GS++ R +A L LS EN I A A+PPLINLL D K
Sbjct: 405 SHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGK 464
Query: 149 FAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRD 208
+ ATA+ L + ++ + G ++ L+ + D + A+ L L +
Sbjct: 465 -KDAATAIFN-LCIYQGNKVRAVKA-GIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEG 521
Query: 209 KYRQLILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSV--LEKIVYDI 266
K +I + IP L+ + G+ +E A E+ L++ +E + ++
Sbjct: 522 KI--VIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKEL 579
Query: 267 AARVDGADKAAETAKRLLQDMVQ 289
+ G D+A A +L+ M Q
Sbjct: 580 SET--GTDRAKRKASSILELMHQ 600
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 24 ARRLNLMGPLWQLS--KTRNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXX 81
A+++ M L+ L+ RNK + +G IP L E+L N
Sbjct: 484 AQKVGAMA-LFNLAVDNNRNKELMLASGIIPLLEEMLC--NPHSHGSVTAIYLNLSCLEE 540
Query: 82 XXXXXXXXXXXXLLVQILHSGS-VQGRVDAVTALHYLSTCKENSSPILDATAVPPLINL- 139
+V +L + + VQ +VDA+ +L +LST N +L A V L +L
Sbjct: 541 AKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLT 600
Query: 140 LKDCKKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGAL 199
+ D ++++ EK+ A+L L +E G+ + ++ + L ++ G + AV L
Sbjct: 601 ISDEQRWT---EKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLL 657
Query: 200 LSLCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERA 238
L LC + +++L+EG IP L+ ++V GT +ERA
Sbjct: 658 LILCNHS-EICSEMVLQEGVIPSLVSISVNGTQRGRERA 695
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 134 (52.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 68/276 (24%), Positives = 113/276 (40%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGT---LREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQ 97
NK I AGA+ +++L++ N + E LV+
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 98 ILHS----GSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKA 153
L + S Q R DA+ AL+ LS + N S IL+ + L+N L D + +E+
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDME----VSERI 335
Query: 154 TALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQL 213
A+L L + EGR AI LV+ + Q +L L RQ+
Sbjct: 336 LAILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGDRQV 395
Query: 214 ILKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSS----VLEKIVY---DI 266
+++ G LL LT+ G+ AQ+RA ++ L S+ L +Y D
Sbjct: 396 MIEAGIESALLELTLLGSALAQKRASRILECLRVDKGKQVLDSTGSCGALSAPIYGTRDN 455
Query: 267 AARVDGADKAAETAKRLLQDMVQRSMELSMTRIQQR 302
+ D ++ ++ +VQ+S++ +M RI +R
Sbjct: 456 GLDHEENDLMMSEERKAVKQLVQQSLQSNMKRIVKR 491
Score = 49 (22.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 42 KVKIATAGAIPPLVELL 58
+V +A GAIPPLV ++
Sbjct: 178 RVTLAMLGAIPPLVSMI 194
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/186 (24%), Positives = 88/186 (47%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
LV+++ SGS++ + A A+ LS +EN+ I + PLI+L K S+ A +
Sbjct: 256 LVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGDSVSQAA--SA 313
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
A L+ +S+ E R + +G I ++ + G L+ ++ + L + D R+ I
Sbjct: 314 AALKNMSAVSELRQLLAE-EGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAI 372
Query: 215 LKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYDIAARVDGAD 274
+ EG +P LL ++G Q E ++ ++L ++ + + + GA
Sbjct: 373 VSEGGVPSLLAY-LDGPLPQQPAVTALRNLIPSVNPEIWVALNLLPRLRHVLKSGSLGAQ 431
Query: 275 KAAETA 280
+AA +A
Sbjct: 432 QAAASA 437
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 51/192 (26%), Positives = 81/192 (42%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
LVQ+L + S + R AV + L+ ++ +PPL+ L++ +K EKA
Sbjct: 215 LVQLLTATSTRIREKAVNLISVLAESGHCDEWLISEGVLPPLVRLIESGSLETK--EKAA 272
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
++ LS +EE I GGI L++ + G VS + AL ++ S + RQL+
Sbjct: 273 IAIQRLSMTEENAREIAGH-GGITPLIDLCKTGDSVSQAASAAALKNM--SAVSELRQLL 329
Query: 215 LKEGAIPGLLRLTVEGTFEAQERAXXXXXXXXXXPQEKRLSSSVLEKIVYDIAARVDGA- 273
+EG I + L G + + V E V + A +DG
Sbjct: 330 AEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIVSEGGVPSLLAYLDGPL 389
Query: 274 -DKAAETAKRLL 284
+ A TA R L
Sbjct: 390 PQQPAVTALRNL 401
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 40 RNKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQIL 99
+NKVKI +G +P L+++LK +E L+ L
Sbjct: 308 QNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHAL 367
Query: 100 HSG-SVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLE 158
S S + R DA AL++LS N + ++ A AVP L+++++ S+ +L
Sbjct: 368 RSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRIL----LVLC 423
Query: 159 ILSSSEEGRIAITNSDGGILTLVETVEDG---SLVSTQHAVGALLSLCQSCRDKYRQLIL 215
L++ +G+ A+ + + + + + E G S + ++ V LL+LCQ ++R L
Sbjct: 424 NLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQG-NLRFRGLAS 482
Query: 216 KEGAIPGLLRLTVEGTFEAQERA 238
+ GA L+ + G +E+A
Sbjct: 483 EAGAEEVLMEVEENGNERVKEKA 505
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 50/146 (34%), Positives = 74/146 (50%)
Query: 94 LLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFA-EK 152
+LV++L S S+ + V + +S E+S +L A + L +LL+ + S FA EK
Sbjct: 190 VLVRLLDSCSLVMKEKTVAVISRISMV-ESSKHVLIAEGLSLLNHLLRVLESGSGFAKEK 248
Query: 153 ATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQ 212
A L+ LS S+E AI GGI +L+E + GS S A G L +L K +
Sbjct: 249 ACVALQALSLSKENARAI-GCRGGISSLLEICQGGSPGSQAFAAGVLRNLALFGETK--E 305
Query: 213 LILKEGAIPGLLRLTVEGTFEAQERA 238
++E AI L+ + GT AQE A
Sbjct: 306 NFVEENAIFVLISMVSSGTSLAQENA 331
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 45/148 (30%), Positives = 75/148 (50%)
Query: 95 LVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKAT 154
L +L G+ +G+ DAV AL LST E+S+ +L++ AV LI L++ +E+A
Sbjct: 531 LASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRN----DTVSEEAA 586
Query: 155 ALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLCQSCRDKYRQLI 214
L +L + +S+ I +LV + G+ ++AV AL +C+ Q +
Sbjct: 587 GALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSALVQRV 646
Query: 215 LKEGAIPGL----LRLTVEGTFEAQERA 238
K IPGL +T+ GT A+++A
Sbjct: 647 AK---IPGLNTVIQTITLNGTKRAKKKA 671
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 41 NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXXXXXXXXXXXXXXXLLVQILH 100
NK+KI +G +P L+++LK + +E L+ L
Sbjct: 258 NKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALR 317
Query: 101 SG-SVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEKATALLEI 159
S S + R DA AL++LS N S ++ A AVP ++++++ + A + LL
Sbjct: 318 SSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRS----GESASRILLLLCN 373
Query: 160 LSSSEEGRIAITNSDGGILTLVETVEDGSLVST----QHAVGALLSLCQSCRDKYRQLIL 215
L++ EG+ A+ + + + + + E G S ++ VGALL+L ++R L
Sbjct: 374 LAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVG-NMRFRGLAS 432
Query: 216 KEGA 219
+ GA
Sbjct: 433 EAGA 436
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 50/221 (22%), Positives = 97/221 (43%)
Query: 23 YAR-RLNLMGPLWQLSKTR-NKVKIATAGAIPPLVELLKFQNGTLREXXXXXXXXXXXXX 80
YA ++N+ L LS + NKVKI +G +PPL+++LK + +E
Sbjct: 283 YATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALED 342
Query: 81 XXXXXXXXXXXXXLLVQILHSGSVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLL 140
L+ ++ G+ R D+ AL++LS + N ++ AV L+ ++
Sbjct: 343 ENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMV 402
Query: 141 KDCKKYSKFAEKATALLEILSSSEEGRIAITNSDGGILTLVETVEDGSLV--STQHA-VG 197
+ + +L ++S R A+ +S GG+ +V + V ST+ + V
Sbjct: 403 S----LGQMIGRVLLILCNMASCPVSRPALLDS-GGVECMVGVLRRDREVNESTRESCVA 457
Query: 198 ALLSLCQSCRDKYRQLILKEGAIPGLLRLTVEGTFEAQERA 238
L L +++ L + A+ L+++ G A+++A
Sbjct: 458 VLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKA 498
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 103 SVQGRVDAVTALHYLSTCKENSSPILDATAVPPLINLLKDCKKYSKFAEK-ATALLEILS 161
S++ + + VTAL LS + N + I + V PL L K K+ + + A A L LS
Sbjct: 223 SLELQENIVTALFNLSILESNKTVIAENCLVIPL--LTKSLKQGTDETRRNAAATLSSLS 280
Query: 162 SSEEGRIAITNSDGGILTLVETVEDGSLVSTQHAVGALLSLC 203
+ + +I I NS+ + L++ +E+G L++T+ A + +LC
Sbjct: 281 AIDSNKIIIGNSEA-VKALIDLIEEGDLLATKEATSTVFNLC 321
>TAIR|locus:2205866 [details] [associations]
symbol:AT1G44120 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030048 "actin filament-based
movement" evidence=RCA] InterPro:IPR000225 InterPro:IPR000008
InterPro:IPR008973 InterPro:IPR016024 Pfam:PF00168 SMART:SM00185
SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC074228
SUPFAM:SSF49562 IPI:IPI00525139 PIR:E96505 RefSeq:NP_175078.1
UniGene:At.38851 ProteinModelPortal:Q9C6Y4 SMR:Q9C6Y4 PaxDb:Q9C6Y4
PRIDE:Q9C6Y4 EnsemblPlants:AT1G44120.1 GeneID:841015
KEGG:ath:AT1G44120 TAIR:At1g44120 eggNOG:NOG319897
HOGENOM:HOG000029638 InParanoid:Q9C6Y4 OMA:RNASHAL PhylomeDB:Q9C6Y4
ProtClustDB:PLN03200 Genevestigator:Q9C6Y4 Uniprot:Q9C6Y4
Length = 2114
Score = 106 (42.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 151 EKATALLEILSSS-EEGRIAITNSDGGILTLVETVEDG-SLVSTQHAVGALLSLCQSCR- 207
E + L IL+ + EE R A+T++ GGI L++ +E G S + AV +L+LC C
Sbjct: 465 ELSVEFLAILTDNVEESRWAVTSA-GGIPPLLQILETGVSQKAKDDAVRVILNLC--CHS 521
Query: 208 DKYRQLILKEGAIPGLLRLTVEGTFEAQE 236
++ R + K GAIP LL L G ++QE
Sbjct: 522 EEIRLCVEKAGAIPALLGLLKNGGPKSQE 550
Score = 62 (26.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 26 RLNLMGPLWQLSKTRN-KVKIATAGAIPPLVELLK 59
+LN L L K +N + KI G IPPL+ LLK
Sbjct: 75 KLNSASVLTVLCKDKNVRSKILIGGCIPPLLSLLK 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 266 0.00094 114 3 11 22 0.47 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 598 (64 KB)
Total size of DFA: 169 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.16u 0.19s 21.35t Elapsed: 00:00:01
Total cpu time: 21.16u 0.19s 21.35t Elapsed: 00:00:01
Start: Sat May 11 13:17:14 2013 End: Sat May 11 13:17:15 2013